Replicon Accession,Replicon Name,Locus tag,RefSeq Accession,RefSeq GI (protein ID),Category,Start,Stop,Gene name,altGeneName,Product name,altProteinName,Product Name Rating,Nucleotide Sequence,Amino Acid Sequence,comment,evidenceReferences,genomicContext,homology,structureFeature,pathway,ecNumber,functionClass,localization,localizationClassConfidence,geneOntology,tigrfamAccession,tigrfamName,tigrfamFunction,tigrfamIsologyType,tigrfamSignificance,tigrfamEcNumber,tigrfamRole,tigrfamSubRole,pfam,pfamDescription,cog,cogDescription,COG_Category,primaryFunctionClassID
NC_008027,Chromosome,PSEEN0001,YP_605815,104779317,Protein,552,2078,dnaA,,Chromosomal replication initiator protein DnaA,,Class 2,GTGTCAGTGGAACTTTGGCAGCAGTGCGTGGAGCTTCTGCGCGATGAACTGCCTGCCCAGCAATTCAACACCTGGATCCGTCCGCTACAGGTCGAAGCCGAAGGCGACGAGTTGCGCGTCTATGCGCCCAACCGCTTCGTGCTCGACTGGGTTAATGAAAAGTACCTGGGTCGTCTGCTCGAGCTGCTGGGCGAACACGGCAATGGCCTTGCGCCCGCTCTGTCTCTATTAATAGGCAGCCGTCGCAGCTCGGCACCGCGCGCCGCCCCCAACGCGCCAGTCAGCGCAGCGGTCGCCGCGACCATGGCGCAGCAAACACAACAGGCTGCGCAGGTCGTGGTGCCGAGCGAACCCATCGTCGTGCCGGTGGCTGAGCCTGTGCTGAGTGAGGTAGAAGAGCCGTCCAGCCGGGACAGCTTCGACAGCATGAGCGATTCGGGTTCGGTGCCAGCGGCCAGCGGCCGTACCGAACAGCGCACCGTGCAGGTCGAAGGGGCGCTCAAGCACACCAGCTACCTGAACCGCACCTTCACCTTCGAAACCTTCGTGGAAGGCAAGTCGAACCAACTGGCGCGCGCCGCCGCCTGGCAGGTCGCCGACAACCCCAAGCACGGCTACAACCCGCTCTTCCTTTATGGCGGTGTCGGCTTGGGTAAGACGCACTTGATGCACGCTGTGGGTAACCACCTGCTCAAGAAGAACCCGAATGCCAAGGTGGTCTACCTGCATTCCGAGCGTTTCGTCGCCGACATGGTCAAGGCGCTGCAACTCAACGCCATCAACGAGTTCAAGCGCTTCTACCGTTCGGTCGACGCGCTGCTCATCGATGACATCCAGTTCTTCGCCCGCAAGGAGCGTTCGCAGGAGGAGTTTTTCCACACCTTCAACGCCCTGCTCGAAGGTGGCCAGCAGGTGATCCTCACCAGCGACCGCTACCCGAAGGAAATCGAAGGCCTGGAAGAGCGCCTGAAGTCGCGTTTCGGCTGGGGGCTGACGGTGGCCGTCGAGCCGCCGGAGCTGGAAACCCGCGTGGCGATCTTGATGAAGAAGGCCGACCAGGCCAAGGTCGAGCTGCCGCATGACGCCGCGTTCTTCATCGCCCAGCGCATCCGCTCCAACGTGCGTGAACTCGAAGGTGCCCTGAAGCGGGTAATTGCCCACTCGCACTTCATGGGCCGCGATATCACCATCGAGCTGATCCGTGAATCGCTCAAGGATCTGCTGGCGCTGCAGGACAAGCTGGTCAGTGTGGATAACATCCAGCGCACCGTGGCCGAGTACTACAAGATCAAGATCTCCGATCTGCTGTCCAAGCGCCGGTCGCGCTCCGTTGCGCGTCCACGCCAGGTGGCCATGGCGTTGTCGAAAGAGCTGACCAACCACAGTCTGCCGGAGATCGGCGACATGTTTGGCGGCCGCGACCACACCACCGTGCTGCACGCTTGCCGCAAGATCAACGAATTGAAGGAATCCGACGCGGACATCCGCGAGGACTACAAGAACCTGCTGCGCACGCTGACGACCTGA,MSVELWQQCVELLRDELPAQQFNTWIRPLQVEAEGDELRVYAPNRFVLDWVNEKYLGRLLELLGEHGNGLAPALSLLIGSRRSSAPRAAPNAPVSAAVAATMAQQTQQAAQVVVPSEPIVVPVAEPVLSEVEEPSSRDSFDSMSDSGSVPAASGRTEQRTVQVEGALKHTSYLNRTFTFETFVEGKSNQLARAAAWQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHTFNALLEGGQQVILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVELPHDAAFFIAQRIRSNVRELEGALKRVIAHSHFMGRDITIELIRESLKDLLALQDKLVSVDNIQRTVAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDMFGGRDHTTVLHACRKINELKESDADIREDYKNLLRTLTT,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 5.2 : Cell cycle physiology ;function prediction: 3.1.2 : Transcriptional level ;function prediction: 2.1.1 : DNA replication ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ;",,,,,,3.6.-.- ;,,Cytoplasmic,Class 3,GO:0006275 ;,TIGR00362,DnaA,chromosomal replication initiator protein DnaA,equivalog,1.20E-170,,DNA metabolism,"DNA replication, recombination, and repair",PF00308PF08299,"Bac_DnaA, Bacterial dnaA protein..Bac_DnaA_C, Bacterial dnaA protein helix-turn-helix domain..",COG0593,"DnaA, ATPase involved in DNA replication initiation [DNA replication, recombination, and repair].","DNA replication, recombination, and repair",
NC_008027,Chromosome,PSEEN0002,YP_605816,104779318,Protein,2119,3222,dnaN,,"DNA polymerase III, beta chain",,Class 3,ATGCATTTCACCATTCAACGCGAAGCCCTGTTGAAACCCCTGCAACTGGTCGCCGGCGTCGTCGAGCGCCGCCAGACCTTGCCGGTCCTGTCCAACGTCCTGCTGGTCGTGCAAGGCCAGCAGCTGTCGTTGACCGGTACCGACCTGGAAGTCGAACTGGTTGGCCGCGTTCAACTGGAAGAGCCTGCGGAGCCGGGCGAGATTACTGTCCCGGCGCGCAAGCTGATGGACATCTGCAAGAGCCTGCCCAGCGATGCGCTGATCGATATCAAGGTCGATGAGCAGAAGTTGCTGGTCAAGGCCGGTCGCAGCCGTTTCACCTTGTCCACCCTGCCGGCCAATGACTTCCCGACTGTCGAAGAAGGTCCTGGCTCGCTGACCTGCCAGCTGGAGCAGAGCAAACTGCGCCGCCTGATCGAGCGCACCAGCTTCGCCATGGCCCAGCAAGACGTGCGCTACTACCTCAACGGCATGTTGCTGGAAGTGTCCCCCGGCACCCTGCGTGCCGTGGCCACCGACGGTCACCGTTTGGCGTTGTGTGCCATGCAGGCACCGATCGACCAAGCTGATCGCCACCAGGTCATCGTGCCACGCAAAGGTATCCTCGAGCTGGCGCGCCTGCTCACCGATCCGGAAGGTACAGTCAGCATCGTCCTGGGCCAGCACCACATTCGCGCCACCACCGGTGAGTTCACCTTCACCTCCAAGCTGGTCGATGGCAAATTCCCGGACTACGAGCGCGTCCTGCCCAAGGGCGGTGACAAGCTGGTGATCGGCGATCGTCAGGCGCTTCGTGAAGCGTTTAGCCGTACCGCGATCCTGTCCAACGAGAAGTACCGCGGTATCCGCCTGCAACTGGCCGCCGGCCAGCTGAAAATCCAGGCCAACAACCCGGAGCAGGAAGAAGCGGAAGAAGAAATCAGCGTCGACTACAACGGCAGTTCGCTGGAGATTGGTTTCAACGTCAGCTACCTGCTGGACGTGCTGGGCGTCATGACCACTGAACAGGTTCGCCTGATTCTGTCGGATTCCAACAGCAGTGCCCTGCTGCAGGAAGCTGGCAATGACGACTCGTCCTACGTTGTCATGCCGATGCGTCTGTAA,MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVQGQQLSLTGTDLEVELVGRVQLEEPAEPGEITVPARKLMDICKSLPSDALIDIKVDEQKLLVKAGRSRFTLSTLPANDFPTVEEGPGSLTCQLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSPGTLRAVATDGHRLALCAMQAPIDQADRHQVIVPRKGILELARLLTDPEGTVSIVLGQHHIRATTGEFTFTSKLVDGKFPDYERVLPKGGDKLVIGDRQALREAFSRTAILSNEKYRGIRLQLAAGQLKIQANNPEQEEAEEEISVDYNGSSLEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALLQEAGNDDSSYVVMPMRL,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 2.1.1 : DNA replication ;Evidence 2b : Function of strongly homologous gene ;",,,,,,2.7.7.7 ;,,Cytoplasmic,Class 3,GO:0009360 ;,TIGR00663,dnan,"DNA polymerase III, beta subunit",equivalog,4.30E-116,2.7.7.7,DNA metabolism,"DNA replication, recombination, and repair",PF00712PF02767PF02768,"DNA_pol3_beta, DNA polymerase III beta subunit, N-terminal domain. A dimer of the beta subunit of DNA polymerase beta forms a ring which encircles duplex DNA. Each monomer contains three domains of identical topology and DNA clamp fold..DNA_pol3_beta_2, DNA polymerase III beta subunit, central domain. A dimer of the beta subunit of DNA polymerase beta forms a ring which encircles duplex DNA. Each monomer contains three domains of identical topology and DNA clamp fold..DNA_pol3_beta_3, DNA polymerase III beta subunit, C-terminal domain. A dimer of the beta subunit of DNA polymerase beta forms a ring which encircles duplex DNA. Each monomer contains three domains of identical topology and DNA clamp fold..",COG0592,"DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) [DNA replication, recombination, and repair].","DNA replication, recombination, and repair",
NC_008027,Chromosome,PSEEN0003,YP_605817,104779319,Protein,3238,4341,recF,,"DNA replication, recombinaison and repair protein",,Class 3,ATGTCCCTTCGACGTCTTTCGGTCACCGCGGTGCGCAACTTGCACCCGGTGACCCTCTCACCCTCCCCCCGCATCAACATCCTTTACGGCGCCAATGGCAGCGGCAAGACCAGCGTGCTCGAAGCCGTGCACCTGCTGGGTCTTGCTCGATCGTTTCGTAGCACCCGCTTGAACCCGGTCATCCAGTACGAGCAGCAAACCTGCACGGTGTTTGGCCAGGTCGAGTTGGCTGAGGGTGGTACCAGCAATCTCGGGGTATCCCGGGAGCGTCAGGGGGAGTTCACTATCCGCATCGACGGGCAGAATGCGCGCAGCGCCGCGCAGCTGGCCGAAATGCTGCCTCTGCAGTTGATCAACCCGGACAGTTTCCGCCTGCTCGAGGGCGCCCCCAAAGTACGCCGGCAGTTCCTCGATTGGGGCGTGTTCCACGTGGAACCACGTTTCATGGCAACCTGGCAGCGCCTGCAGAAGGCCCTGCGGCAGCGGAACTCATGGCTGCGGCATGGTACACTTGACGCCGTTTCGCAAGCCGCCTGGGATCGGGAGTTATGCCTCGCCAGTGCGGAGATAGATGAATACCGTCGCAATTACATCAAGGCCTTGAAGCCTGTCTTCGAGCGAACCCTGAGCGAGCTGGTCGAACTGGACGGGCTGACCCTGAGCTACTACCGAGGCTGGGACAAGGACCGGGAACTTAACGAAGTCCTGGCGACCTCTCTCCTCCGTGACCAGCAGATGGGCCATACCCAAGCCGGGCCACAGCGTGCTGACCTGCGCCTTCGATTGGGTGCGAACAACGCGGCTGACATTCTCTCGCGGGGCCAGCAGAAGCTGGTGGTGTGCGCCCTGCGGATCGCCCAAGGGCACCTGGTCAGCCAGGTCCGCCGCGGTCAGTGTATTTATCTGGTGGATGACTTGCCGTCCGAGTTGGACGAACAGCATCGCCGCGCCCTGTGCCGCTTGCTTGAAGAATTGAACTGCCAGGTGTTCATCACCTGTGTAGACCACGAATTTCTGAGGGAAGGCTGGCAGACGGAAACGCCAGTCGCTTTGTTCCACGTGGAACAGGGCCGTATCACCCAGACCCACGACCATCGGGAGTGA,MSLRRLSVTAVRNLHPVTLSPSPRINILYGANGSGKTSVLEAVHLLGLARSFRSTRLNPVIQYEQQTCTVFGQVELAEGGTSNLGVSRERQGEFTIRIDGQNARSAAQLAEMLPLQLINPDSFRLLEGAPKVRRQFLDWGVFHVEPRFMATWQRLQKALRQRNSWLRHGTLDAVSQAAWDRELCLASAEIDEYRRNYIKALKPVFERTLSELVELDGLTLSYYRGWDKDRELNEVLATSLLRDQQMGHTQAGPQRADLRLRLGANNAADILSRGQQKLVVCALRIAQGHLVSQVRRGQCIYLVDDLPSELDEQHRRALCRLLEELNCQVFITCVDHEFLREGWQTETPVALFHVEQGRITQTHDHRE,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 2.1.3 : DNA recombination ;function prediction: 5.8 : SOS response ;Evidence 2b : Function of strongly homologous gene ;",,,,,,3.6.-.- ;,,Cytoplasmic,Class 3,GO:0009432 ;,TIGR00611,recf,DNA replication and repair protein RecF,subfamily,6.10E-138,,DNA metabolism,"DNA replication, recombination, and repair",PF02463,"SMC_N, RecF/RecN/SMC N terminal domain. This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination..",COG1195,"RecF, Recombinational DNA repair ATPase (RecF pathway) [DNA replication, recombination, and repair].","DNA replication, recombination, and repair",
NC_008027,Chromosome,PSEEN0004,YP_605818,104779320,Protein,4346,6766,gyrB,,"DNA gyrase, subunit B",,Class 2,ATGAGCGAAAATCAAACGTACGACTCCTCCAGCATCAAGGTGCTGAAAGGGCTGGATGCCGTACGCAAGCGTCCCGGCATGTACATTGGCGACACCGATGACGGCAGCGGCCTGCACCACATGGTGTTCGAGGTGGTCGACAACTCGATCGACGAAGCCCTGGCCGGGCACTGCGATGACATCACCGTCATCATTCACACCGACGAATCCATCAGCGTCCGTGACAACGGTCGTGGCATTCCGGTCGACGTGCATAAAGAAGAAGGCGTATCCGCAGCCGAGGTCATCATGACCGTGCTGCACGCCGGCGGTAAGTTCGACGACAACTCCTACAAGGTTTCCGGCGGTCTGCACGGTGTAGGTGTTTCGGTGGTAAACGCTCTATCCGAAAAGCTGGTGCTCACCGTTCGCCGCAGCGGCAAGATCTGGGAACAGACGTATGTCCACGGTGTTCCACAGGCACCGATGGCCGTGGTGGGTGAAAGCGAAACCACCGGTACCCACATTCACTTCAAGCCTTCGGCTGAAACCTTCAAGAACATTCACTTCAGCTGGGATATCCTCGCCAAGCGTATCCGCGAGCTGTCGTTCCTGAACTCCGGTGTCGGTATCCTGCTGAAGGATGAGCGCAGCGGCAAGGAAGAGTTCTTCAAGTATGAAGGCGGCCTGCGTGCTTTCGTTGAATACCTGAACACCAACAAGACCCCGGTCAACTCCCAGGTCTTCCACTTCAACGTCCAGCGTGACGATGGCGTGGGTGTCGAAGTCGCCCTGCAATGGAACGACAGCTTCAACGAAAACCTGCTGTGCTTCACCAACAACATTCCCCAGCGCGACGGTGGTACTCACCTGGTCGGCTTCCGCTCTTCGCTCACCCGTAGCCTGAACAGCTACATCGAGCAGGAAGGCCTGGCGAAGAAGAACAAGGTTGCTACCACCGGTGACGACGCCCGTGAAGGCCTGACCGCGATCATTTCGGTCAAGGTGCCGGACCCCAAGTTCAGCTCGCAGACCAAGGACAAGCTGGTTTCCTCGGAGGTGAAGACCGCCGTGGAACAGGAGATGAACAAGTACTTCGCCGACTTCCTGTTGGAGAACCCCAACGAAGCCAAGGCCGTGGTCGGCAAGATGATCGACGCCGCCCGTGCCCGTGAAGCGGCACGTAAAGCGCGTGAGATGACCCGCCGTAAAGGTGCCCTGGACATCGCCGGCCTGCCGGGCAAACTGGCCGACTGCCAGGAGAAGGACCCTGCCCTTTCCGAACTGTACCTGGTGGAGGGTGACTCCGCAGGTGGTTCGGCCAAGCAAGGTCGCAACCGCCGCACTCAGGCAATCCTGCCGCTCAAGGGCAAGATCCTCAACGTCGAGAAGGCACGCTTTGACAAGATGATCTCTTCGCAGGAGGTCGGCACGCTGATCACCGCGCTGGGCTGTGGTATCGGCCGCGAAGAGTACAACATCGACAAGCTGCGTTATCACAACATCATCATCATGACCGATGCTGACGTCGACGGTTCGCACATCCGTACCCTGCTGCTGACGTTCTTCTTCCGCCAGTTGCCGGAGCTGGTCGAGCGTGGCTACATCTATATCGCCCAGCCGCCGCTGTACAAGGTGAAAAAGGGCAAGCAGGAGCAGTACATCAAGGACGACGAGGCCATGGAAGAATACATGACCCAGTCGGCCCTGGAAGATGCCAGCCTGCACCTGGACGAGTCGGCGCCAGCCGTTTCGGGCGTGCAGCTCGAGGCGTTGGTGAACGAATTCCGCACCGTGATGAAGACCCTGAAGCGTCTGTCGCGTCTGTACCCGGAAGAGCTCACCGAACACTTCATCTACCTGCCGGAAGTCACCCTGGAGCAACTGGCCAACCATGCCACCATGCAGGGCTGGCTGAGCAAGTTCCAGGAGCGCCTGAACAACAGCCAGAAGTCCGGCCTCAGCTATGTGGCCAGCCTGCGCGAAGACAAGGAGCGCAACATCTGGCTGCCTGAAGTGGAAATCACTTCCCACGGCCTGGCCAGCTACGTCACCTTCAACCGTGAGTTCTTCGGTAGCAACGACTACCGCTCGGTGGTCAACCTGGGCGCCAAGCTCGGTACGTTGCTCGGCGAGGGTGCCTACGTTCAGCGTGGCGAGCGCCGCAAAGCGGTCACCGAGTTCAAGGAAGGCCTGGATTGGCTGATGAACGAAAGCACCAAGCGCCACACCATCCAGCGATATAAAGGGCTGGGTGAGATGAACCCGGACCAGCTGTGGGAAACCACCATGGACCCGACCGTGCGCCGCATGCTCAAGGTGACTATCGAGGACGCAATCGCTGCCGACCAGCTGTTCAACACCCTGATGGGTGATGCAGTCGAGCCGCGCCGTGACTTCATTGAAAGCAACGCGTTGTCGGTGTCCAACCTGGACTTCTGA,MSENQTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDITVIIHTDESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSEKLVLTVRRSGKIWEQTYVHGVPQAPMAVVGESETTGTHIHFKPSAETFKNIHFSWDILAKRIRELSFLNSGVGILLKDERSGKEEFFKYEGGLRAFVEYLNTNKTPVNSQVFHFNVQRDDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSSLTRSLNSYIEQEGLAKKNKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMNKYFADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSELYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELVERGYIYIAQPPLYKVKKGKQEQYIKDDEAMEEYMTQSALEDASLHLDESAPAVSGVQLEALVNEFRTVMKTLKRLSRLYPEELTEHFIYLPEVTLEQLANHATMQGWLSKFQERLNNSQKSGLSYVASLREDKERNIWLPEVEITSHGLASYVTFNREFFGSNDYRSVVNLGAKLGTLLGEGAYVQRGERRKAVTEFKEGLDWLMNESTKRHTIQRYKGLGEMNPDQLWETTMDPTVRRMLKVTIEDAIAADQLFNTLMGDAVEPRRDFIESNALSVSNLDF,"inference: ab initio prediction:AMIGene:2.0 ;function prediction: 3.1.1.1 : DNA bending, supercoiling, inversion ;inference: non-experimental evidence, no additional details recorded ;function prediction: 2.1 : DNA related ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ;",,,,,,5.99.1.3 ;,,Periplasmic,Class 3,GO:0009387 ;,TIGR01059,gyrB,"DNA gyrase, B subunit",equivalog,0,5.99.1.3,DNA metabolism,"DNA replication, recombination, and repair",PF00204PF00986PF02518,"DNA_gyraseB, DNA gyrase B. This family represents the second domain of DNA gyrase B which has a ribosomal S5 domain 2-like fold. This family is structurally related to pfam01119..DNA_gyraseB_C, DNA gyrase B subunit, carboxyl terminus. The amino terminus of eukaryotic and prokaryotic DNA topoisomerase II are similar, but they have a different carboxyl terminus. The amino-terminal portion of the DNA gyrase B protein is thought to catalyse the ATP-dependent super-coiling of DNA. See pfam00204. The carboxyl-terminal end supports the complexation with the DNA gyrase A protein and the ATP-independent relaxation. This family also contains Topoisomerase IV. This is a bacterial enzyme that is closely related to DNA gyrase,..HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. This family represents the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90..",COG0187,"GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair].","DNA replication, recombination, and repair",
NC_008027,Chromosome,PSEEN0005,YP_605819,104779321,Protein,8141,6840,,,sigma-54 dependent transcriptional regulator,,Class 3,ATGCTAGCCGCTTCCCATCCTGCGATCTTCGCGCTGGTGTCCTACCTCGAACACGATGTGCTGCCCAGCATCGTGCTGGATACTGACTACAACATCCTGGCAGCCAACGCGGCGTACCGTCGCCAGTTTGGCACCGAGGAGCACGCGCCCATCGGCGAAAAGTGCCATCGAGTCTCGCACCACTATGCCGTCCCTTGCGACCAGGCCGGGGAACATTGTCCGCTGCGCAAGTCACTGGACAGCAAGGTGCCCGAGCGCGTTCTCCACATCCATCACACCCCACGCGGGCCTGAACATGTGGATGTGGAACTGCGCCCGATCCTCGATGACGAGGGTAGGGTAGTAGCCTTCGTCGAGCGCCTGACCAGCGTCACCCTGGCATCGGCTCAACCTCAACAGCAAGGGCTGGTTGGCCGAGCACCCGCGTTCAAGGCCGCCGTGGCCAGTTTGCAGCGCGCGGCGCCTGCACAGATTCCGGTATTGCTTCAGGGTGAGTCCGGCACTGGCAAGGAACTGTTCGCCCGTGCCTTGCACCTGGGTAGCCCACGCGCCAATGGCCCCCTGGTGGTGGTGGACTGCACCGGGTTGACCGAGTCGTTGTTCGAGAGTGAATTGTTCGGCTATGAGAAGGGCGCCTTCACCGGCGCGACTCAACGCAAGATCGGCCTGGCCGAAGCCGCTCACGGTGGCACCCTGTTCCTCGATGAGATCGGTGAGGTACCGCTGGCCATGCAGGTAAAGCTGCTGCGCCTGATCGAGTCCGGCAGCTTCCGCCCGGTCGGCAGCACACGCACGGTCCACTCAGATTTTCGCCTGGTCTCGGCCACGCACAAACCACTGAAAGAGATGGCCACTGAAGGGACGTTCCGCGAAGACCTCTATTACCGCATCAGTGGATTCCCGATCCGCTTGCCATCACTGCGCGAACGGGTCGAAGACTTGCCACTGCTCTGTGAAAGTCTGCTGCAACGAATGGCCGGCAAGCAATCGCCAAAAGTTACGGCTGAGGCGCTCGAGCAGCTGAACCTGCACACCTTCCCAGGCAACATCCGTGAACTCAGGAATATTCTGGAACGCGCCCGGCTGTTCACGGATGACGGTCTGATCCGCCCTGAGCATCTTCCAGAAGATATGTACCCGGCCGCAAAGCCGGCATGTTCACGAGGGCGGGGCAGGAATGAAATGGCCGACCTGGCCCATGCCTTGGAAACCTTCAATGGCTCCCGTAGCGAGTTGGCCGATCATCTGGGGATGAGCGAACGCACGTTGTACCGTCGGCTGAAGGCGCTGGGCATTTCATAG,MLAASHPAIFALVSYLEHDVLPSIVLDTDYNILAANAAYRRQFGTEEHAPIGEKCHRVSHHYAVPCDQAGEHCPLRKSLDSKVPERVLHIHHTPRGPEHVDVELRPILDDEGRVVAFVERLTSVTLASAQPQQQGLVGRAPAFKAAVASLQRAAPAQIPVLLQGESGTGKELFARALHLGSPRANGPLVVVDCTGLTESLFESELFGYEKGAFTGATQRKIGLAEAAHGGTLFLDEIGEVPLAMQVKLLRLIESGSFRPVGSTRTVHSDFRLVSATHKPLKEMATEGTFREDLYYRISGFPIRLPSLRERVEDLPLLCESLLQRMAGKQSPKVTAEALEQLNLHTFPGNIRELRNILERARLFTDDGLIRPEHLPEDMYPAAKPACSRGRGRNEMADLAHALETFNGSRSELADHLGMSERTLYRRLKALGIS,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 3.1.2 : Transcriptional level ;function prediction: 2.2.2 : Transcription related ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ;",,,,,,,,Cytoplasmic,Class 3,GO:0006808 ;,TIGR01818,ntrC,nitrogen regulation protein NR(I),equivalog,6.50E-40,,Signal transduction,Two-component systems,PF00158PF08448PF07728PF00004PF02954,"Sigma54_activat, Sigma-54 interaction domain..PAS_4, PAS fold. The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs. The PAS fold appears in archaea, eubacteria and eukarya..AAA_5, ATPase family associated with various cellular activities (AAA). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model..AAA, ATPase family associated with various cellular activities (AAA). AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes..HTH_8, Bacterial regulatory protein, Fis family..",COG3829,"RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms].",Transcription / Signal transduction mechanisms,
NC_008027,Chromosome,PSEEN0007,YP_605820,104779322,Protein,8388,9272,,,metallo-beta-lactamase family protein,,Class 3,ATGATCATCGGCAACAACCTTCACGTTGAAGCGTTCTTCGACAAAGCGACCTGGACCATCAGCTACCTGGTCATGGATGGCGAGACCCGCCAATGCGCGCTGATCGACAGCGTGCTGGACTACGATCCAAAGTCCGGACGTACCTGCACCCATTCGGCGGACCAGATGATTGCCCGCGTCGAGGCGCTGGGTGCCAAGGTGCAATGGCTGCTCGATACCCATGTGCACGCCGACCATCTGTCTGCGGCGGCCTATCTCAAGCAGAAGCTTGGCGGCAGCATCGCCATTGGTGCGCAGATCACCCAGGTGCAGAAAGTCTTCGGGACTTTGTTCAATGCCGAGCCTGGCTTTGCCCGGGACGGCAGCCAGTTTGATGTCCTGTTCGTGGATGAAGAGGGTTTCCGCATCGGCAACCTGCATGCGCGCGCACTGCACACCCCTGGTCATACACCGGCTTGCATGAGCTACATGGTCGAGGACGCAGGCGAGATCGCCGTGTTCGTCGGCGACACCTTGTTCACGCCCGACTATGGCACCGCCCGTTGCGACTTCCCAGGCGCCAGCGCGAGAACCCTGTACCAGTCGATCCGTCGGCTGCTTGCCTTCCCTGACCAGACCCGCCTGTTCATGTGCCATGACTACCTTCCCGGTGGCCGTGAACTGCGCTACGTCACCACCGTGGCCGAGCAACGCGCCGACAACATTCATATCCATGAAGGTGTCAGTGAAGAGAGCTTCGTCGAGATGCGCGAAGCCCGCGACAAGACCCTCGACATGCCGGTGCTGATCCTGCCCTCGGTGCAGATCAACATGCGCAGCGGGCAGTTCCCCGAACCCGAAGCGAACGGTGTGAGCTACCTGAAGATCCCGCTGAACAAGCTGTAA,MIIGNNLHVEAFFDKATWTISYLVMDGETRQCALIDSVLDYDPKSGRTCTHSADQMIARVEALGAKVQWLLDTHVHADHLSAAAYLKQKLGGSIAIGAQITQVQKVFGTLFNAEPGFARDGSQFDVLFVDEEGFRIGNLHARALHTPGHTPACMSYMVEDAGEIAVFVGDTLFTPDYGTARCDFPGASARTLYQSIRRLLAFPDQTRLFMCHDYLPGGRELRYVTTVAEQRADNIHIHEGVSEESFVEMREARDKTLDMPVLILPSVQINMRSGQFPEPEANGVSYLKIPLNKL,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 5.6.4 : Drug resistance/sensitivity ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ;",,,,,,,,Unknown,Class 3,,,,,,,,,,PF00753,"Lactamase_B, Metallo-beta-lactamase superfamily..",COG0491,"GloB, Zn-dependent hydrolases, including glyoxylases [General function prediction only].",General function prediction only,
NC_008027,Chromosome,PSEEN0008,YP_605821,104779323,Protein,9314,10594,,,hypothetical protein,,Class 4,ATGCCTGCCTTGCTGTCCCCTGCCGATACCTCCCGTGCCGACCACCATAAGGTGGTGATCGTCGGCGCTGGTGCCGCCGGCATCGCCACCGCCTCCAGCCTGATCGCCCGTGATCCGTCGCTGGATATCGCCTTGATCGACCCCGCCGAAGTCCACTACTACCAGCCCGGCTGGACCATGGTCGGCGCGGGTGTGTTCAAGGCACCAAGCACCGCCCACACCATGGCCGCGACCCTGCCCCGTGGCGTGCGCTGGATCAAGGCGCGGGTCGAAGGTTTCGACCCCCAGGGGCAACTGGTGATGCTTGATGATGGCCGTGCCGTCAGCTATGAACAGCTGGTGGTCTGCCCAGGGCTCAAGCTTGATTGGAATGCCATCGAAGGCTTGAGCGAAACGCTGGGGCGTAACGGCGTCACCTCCAATTATCGCTACGACCTGGCGCCCTACACGTGGCAACTGGTGCAGAAGCTGAAGCACGGACGCGCCCTCTTCACCCAACCACCGATGCCGATCAAGTGCGCGGGAGCACCACAGAAAGCGCTGTACCTGTCCTGCGACTACTGGTTACGCAATGGCCACCTTGGCAATGTCAGGGCCAGCTTCTTCAATGCCGGTGCTGTGCTGTTCGGGGTCGTGGACTATGTCCCGGCCCTGATGAGCTACATCGACAAGTACGCGGTCGACCTCAATTACCAGCATCGCCTGGTGGCTGTGGACGGCCCGAACAAGCGCGCCACCTTCATGCGCACTCTTCCCGATGGCAGCACCGAGACCCGCGTCGAAGCGTTCGACATGCTGCATGTGGTACCGCCGCAAGTGGCGCCGGACTTCATCCGCCAGAGCCCACTGGCCGACGCCGGCGGCTGGGTGGACGTCGACCCGCACACCCTGCGCCATCGCCAGTTCGGCAATGTCCATGCCCTGGGTGACGTGGCCAACACCACCAACGCCAAGACTGCGGCCGCCGCACGCAAGCAGGCGCCGGTGGTGGCCAACAATGTGCTGGTGGCGCTCGGTCGCTTGTCGACCCTGGCGCAGTACGACGGCTACGGCTCATGCCCATTGACGGTGGAGCGCGGCAAGATCGTCCTCGCTGAGTTCACCTACGGGGGCAAGGTGGCGCCGAGCTTCCCGCGCTGGCTGCTCGACGGACGCAAGCCGACCCGCCTCGCCTGGCTGCTCAAGGCGCGGATCCTGCCACCGCTGTACTGGAAGGCGATGCTCAAGGGGCGTGAATGGCTGGCACGGCCGAAACCGCTGGTAGCCGAGGCGCAACAGTGA,MPALLSPADTSRADHHKVVIVGAGAAGIATASSLIARDPSLDIALIDPAEVHYYQPGWTMVGAGVFKAPSTAHTMAATLPRGVRWIKARVEGFDPQGQLVMLDDGRAVSYEQLVVCPGLKLDWNAIEGLSETLGRNGVTSNYRYDLAPYTWQLVQKLKHGRALFTQPPMPIKCAGAPQKALYLSCDYWLRNGHLGNVRASFFNAGAVLFGVVDYVPALMSYIDKYAVDLNYQHRLVAVDGPNKRATFMRTLPDGSTETRVEAFDMLHVVPPQVAPDFIRQSPLADAGGWVDVDPHTLRHRQFGNVHALGDVANTTNAKTAAAARKQAPVVANNVLVALGRLSTLAQYDGYGSCPLTVERGKIVLAEFTYGGKVAPSFPRWLLDGRKPTRLAWLLKARILPPLYWKAMLKGREWLARPKPLVAEAQQ,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 4 : Homologs of previously reported genes of unknown function ;",,,,,,,,Unknown,Class 3,,,,,,,,,,PF07992,"Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase. This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain..",COG0446,"HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only].",General function prediction only,
NC_008027,Chromosome,PSEEN0009,YP_605822,104779324,Protein,10591,11409,,,hypothetical protein,,Class 4,GTGATCGAGCATCAATTGCTGGGGGCTGGGCTCGGCGCGATCATTGGGGCGGTACTGGCCCTGACCGGTGCTGGCGGTGGCATCCTCGCGGTGCCGTTGCTGGTCTTCGGGCTTGGGCTGAGCATGGTCGAGGCGGCGCCGATCGGTCTGCTGGCCGTGGGGTTGGCGGCGGCGGTCGGTGGTGTGTTGGGTTTGCGCCAGGGCCTGGTGCGCTACCGGGCGGCCTTGTTCATTGCCGTGATCGGTATCGCTTGCGCACCGTTCGGCCTGATGCTCGCGCACCGTTTGCCCAACGCACCGCTGGCGCTGGTGTTCGCCGGGGTGCTGGTCTATGCCTGCCTGCGCATCTGGCGTAAAGCTACCCGCGAGTTGCGCGGTGAATCGCCCTGCGATGATCGGCAGATCATGCCCTGCGTGCTCAATCCGCTGCAGGGGCGGCTGCGCTGGACCCTGCCCTGCGCCCGGGCTTTGGCGTTCACCGGTATGTTGTCGGGGCTGCTGTCCGGCCTGTTGGGTGTCGGTGGCGGCTTCGTGATCATCCCGGCGTTGAACCGCTACACCAACCTGAACATGAAGAGCATCGTTGCCACCTCGCTGGCGGTGATCGCCCTGGTGTCCACCGGCAGTGTGGTCAGCGCCAGCGTGGCGGGCGTGATGCACTGGCGGGTCGGGGCACCGTTTGCCGTGGGGGCGGTACTGGGCTTGCTGCTGGCGAGGCCACTGGCGGGCAAGCTGGCCGGCCCGCGCCTGCAACAGCTGTTCGCCGTGGTGGGGTGTGGCGCCGCGGTGCTGCTGGCCGGCAAGGCGCTACTCGGCTAG,MIEHQLLGAGLGAIIGAVLALTGAGGGILAVPLLVFGLGLSMVEAAPIGLLAVGLAAAVGGVLGLRQGLVRYRAALFIAVIGIACAPFGLMLAHRLPNAPLALVFAGVLVYACLRIWRKATRELRGESPCDDRQIMPCVLNPLQGRLRWTLPCARALAFTGMLSGLLSGLLGVGGGFVIIPALNRYTNLNMKSIVATSLAVIALVSTGSVVSASVAGVMHWRVGAPFAVGAVLGLLLARPLAGKLAGPRLQQLFAVVGCGAAVLLAGKALLG,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 4 : Homologs of previously reported genes of unknown function ;",,,,,,,,Cytoplasmic Membrane,Class 3,,,,,,,,,,PF01925,"DUF81, Domain of unknown function DUF81. This integral membrane protein family has no known function. The alignment appears to contain two duplicated modules of three transmembrane helices..",COG0730,"COG0730, Predicted permeases [General function prediction only].",General function prediction only,
NC_008027,Chromosome,PSEEN0010,YP_605823,104779325,Protein,12285,11398,,,"transcriptional regulator, LysR family",,Class 3,ATGTTCGACTGGAACGATCTGCGGTTTTTCCTCGAGTTGCAGCGCAGCGGCCGTCTGCTCACCGCCGCCAAGCGCCTCAACACCACCCACAGCACCGTGGCCCGGCATATCGAGAGCATCGAAAAGCACCTGGGCACCGCGCTGTTCGTCCAGCATGCCCAGGGCTACGAACTCACCCCCTCCGGCCAGGCCCTGCTCAAGCACGCCGAAGCGATGGAAAACGTTGCCCTGCTGGCGCAGGAAGAAATCACCCAGGCCATCACGCCGCTGGGCAAGATTCGCCTGGGGGTGACCGAGGGTATCGGCATCATGTTCTTCACCCCGCGCATGAACGCCTTGTTCCAGCGCTACCCGGGGCTCGAAGTGGAATTGGTGGCCGTGCCGCGCTTCGTCAGCATCCTCAACCGCGAAGCCGAGATCAGCATCCACCTGGAACGCCCCAACGCCGACCTGCTGATCACCCGCAAGCTCACCGACTACCGCCTGGCACTCTACGCCAGCCAAGACTACCTGGACCGCGCACCACCGCTGCAAAGCCGCGAGGACCTGGCCCGGCACAGCTGGATTGGTTACGTCGACGACCTGCTGTTCAGCCAAGAGCTGCTGTTCCTCAACAGCTTCTGCCGAACACCCAACGTGGTGTTCCGCAGCACCAGCGTGATCGCCCAGCAGCACGCCGCCCAGGCCGGGCTGGGTATCGCCGTGCTGCCCAACTACATGGCCCGCCACGACCCGAAGCTGGTGCGCGTGCTGCCCAGCGAGACCATCCAGCGCAGCTATTGGATCTGCACCCGCCGCGAACTGCACAAGTCGGTACGCCTGCGGGTGGTGTGGGACTATCTGCTGGCGCTGTGCGCCGCCGAGCAGGACGAATTGCTAGCCGAGTAG,MFDWNDLRFFLELQRSGRLLTAAKRLNTTHSTVARHIESIEKHLGTALFVQHAQGYELTPSGQALLKHAEAMENVALLAQEEITQAITPLGKIRLGVTEGIGIMFFTPRMNALFQRYPGLEVELVAVPRFVSILNREAEISIHLERPNADLLITRKLTDYRLALYASQDYLDRAPPLQSREDLARHSWIGYVDDLLFSQELLFLNSFCRTPNVVFRSTSVIAQQHAAQAGLGIAVLPNYMARHDPKLVRVLPSETIQRSYWICTRRELHKSVRLRVVWDYLLALCAAEQDELLAE,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 3.1.2 : Transcriptional level ;function prediction: 2.2.2 : Transcription related ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ;",,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,PF03466PF00126,"LysR_substrate, LysR substrate binding domain. The structure of this domain is known and is similar to the periplasmic binding proteins..HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family..",COG0583,"LysR, Transcriptional regulator [Transcription].",Transcription,
NC_008027,Chromosome,PSEEN0012,YP_605824,104779326,Protein,12538,14187,,,"oxidoreductase, GMC family",,Class 3,ATGCCATCAGCCGATTCTGTCTACGACTACGTGGTCGTGGGTGCCGGGCCCGCCGGGTGCCTGCTGGCCAATCGTTTGTCCGCTGACCCTTCGTGTCGCGTATTGCTGCTCGAGGCGGGTGGTCGTGACAACTATCCCTGGATACACATCCCTGTCGGTTACCTCTACTGCATTGGCAATCCACGCACCGACTGGTGCTTCAAGACCGAGTCCCAACCTGGCCTTAACGGGCGCAGCCTTGGTTATCCACGGGGCAAGGTGCTGGGGGGCTGTTCATCGATCAACGGCATGATCTACATGCGTGGACAGGCCGCCGACTACGACCGCTGGGCCGAGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGCTGCCGTTGTTCAAGGCCAGCGAGAACCACTTCGCCGGCGCCAGTGACAGCCACGGCGCCGAGGGGGAATGGCGGGTCGAACAGCAGCGCTACAGCTGGCCGATTCTTGATGCCTTCCGCGATGCCGCCGAGCAGAGTGGCATCGCCAAGGTGGCCGACTTCAACACAGGCGACAACGCAGGCTGTGGATACTTTCAGGTGAACCAGCGCAGCGGTGTGCGCTGGAACTCAGCCAAGGCGTTTCTCAGGCCTGTCCTCAAGCGGCCGAACCTCACCGTCTTGACCGGTGTGCAGGTCGACCAGGTGCTGCTCGACAACACGCGCGCCCGAGCGGTGAAGGCCTTGTGGCAAGGCGCTTGGCATGAGTTCGCCGCCCGTCGCGAGATCATCCTTTGTGCGGGCTCCGTCGGCTCGCCCGGCATTCTCCAGCGCTCCGGCATCGGCCCGCGCAAACTGCTGGAGGATCTGGGTATCGGTGTGCGCCACGACATGCCGGGTGTCGGCGGCAACCTGCAGGACCATTTGCAATTGCGCCTGATCTACCAGATCAACAACACCCGAACCCTCAACCAGATGGCCAACAGCCTGTGGGGCAAGCTGGGGATGGGCCTTCGTTATGCCTATGACCGCAGCGGCCCATTGGCCATGGCGCCCAGCCAGTTGGGTGCCTTCGCGCGATCAGGCCCTGAGCAGGCAACGGCCAACCTGCAATATCACGTGCAGCCGTTGTCGCTGGACCGCTTCGGTGAACCGCTGCATCGGTTCCCGGCCTTCACCGCCTCGGTATGCAACCTGCGCCCGGCCAGCCGCGGGCGAATCGATATCCGATCGGCGGACATGAATACCGCGCCGCTGATCGATCCCAACTACCTTAGCGCCCCTGAGGACCTGCGCGTCGCCGCCGACGCCATCCGCCTCACCCGGAAGATTGTCCAGGCCCCTGCCCTCGCCGCTTTCGCACCTCGCGAATACCTGCCCGGCCCTGCCCTGCAGAACGAGGAGGACTTGCACCAGGCCGCCGGCCAGATCGGCACCACCATCTTCCACCCGGTCGGCACCTGCCGCATGGGCAGCGGGCCGCTGGACGTTGTGGATAACCAGCTGCGCGTTCACGGCATCCCTGGCCTGCGCGTGGCCGACGCCTCGATCATGCCGCAGATCGTCTCCGGCAATACCTGTTCACCCACGTTGATGATTGCCGAAAAGGCGGCACAACTGATCCTCAAGGGGGCCAATACCCAGACCAACCTCAGCGACGCCAGCGCGATACCGACGCCCTGA,MPSADSVYDYVVVGAGPAGCLLANRLSADPSCRVLLLEAGGRDNYPWIHIPVGYLYCIGNPRTDWCFKTESQPGLNGRSLGYPRGKVLGGCSSINGMIYMRGQAADYDRWAEQGNDGWAWKDVLPLFKASENHFAGASDSHGAEGEWRVEQQRYSWPILDAFRDAAEQSGIAKVADFNTGDNAGCGYFQVNQRSGVRWNSAKAFLRPVLKRPNLTVLTGVQVDQVLLDNTRARAVKALWQGAWHEFAARREIILCAGSVGSPGILQRSGIGPRKLLEDLGIGVRHDMPGVGGNLQDHLQLRLIYQINNTRTLNQMANSLWGKLGMGLRYAYDRSGPLAMAPSQLGAFARSGPEQATANLQYHVQPLSLDRFGEPLHRFPAFTASVCNLRPASRGRIDIRSADMNTAPLIDPNYLSAPEDLRVAADAIRLTRKIVQAPALAAFAPREYLPGPALQNEEDLHQAAGQIGTTIFHPVGTCRMGSGPLDVVDNQLRVHGIPGLRVADASIMPQIVSGNTCSPTLMIAEKAAQLILKGANTQTNLSDASAIPTP,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ;",,,,,,1.-.-.- ;,,Unknown,Class 3,GO:0019285 ;,TIGR01810,betA,choline dehydrogenase,equivalog,3.70E-122,1.1.99.1,Cellular processes,Adaptations to atypical conditions,PF00732PF05199,"GMC_oxred_N, GMC oxidoreductase. This family of proteins bind FAD as a cofactor..GMC_oxred_C, GMC oxidoreductase. This domain found associated with pfam00732..",COG2303,"BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].",Amino acid transport and metabolism,
NC_008027,Chromosome,PSEEN0013,YP_605825,104779327,Protein,14285,15904,,,major facilitator family transporter,,Class 3,ATGTCGGATTACATCCAGGAACAGGGGGCGGCGGCGAGCAGCCCCAGCCGCCGTGAAGAGCGCAAGATCATTTTCGCGTCATCCCTCGGGACGGTGTTCGAGTGGTATGACTTTTTTCTCTATGGCGCGCTGGCCGCAGTCATCAGCAAGCAGTTCTTTGCCGGCGTCAACGACACCACTGCCTTCATCTTTGCCTTGATGGCCTTCGCGGCCGGTTTCCTGGTGCGCCCGTTCGGGGCGCTGGTGTTCGGCCGGCTGGGTGACATGATTGGACGCAAATACACCTTCCTGGTGACCATTGTGCTGATGGGCCTGTCCACCTTCGCGGTGGGCCTGCTACCGACCTATGCCAGCATCGGCATCGCTGCCCCGATCATTCTGGTTGTGCTGCGCATGCTCCAGGGCCTGGCGCTGGGCGGTGAGTACGGTGGTGCGGCTACCTATGTCGCCGAGCACGCGCCCCATGGCAAGCGTGGTTTCCACACCGGCTTCATCCAGTCCACCGCCACGCTGGGCCTGCTGTTGTCGCTGACCGTGGTCCTGGCCAGCCGCTATATCAGCGGTGACCAGTTTGAAACCTGGGGCTGGCGCCTGCCGTTCCTGCTGTCGATCGTACTGCTGGCGATCTCCACCTGGATCCGCATGAGCATGCATGAGTCGCCGGCCTTCGTGAAAATGAAGGCCCAGGGCAAGGTGAGCAAATCGCCGATTCGTGAGTCGTTCACCTCCTGGCCCAACCTCAAGGTGGTGCTCACCGCGCTGTTCAGTATCAACGCCGGGCAGGCGGTGACCTTCTACACCGCACAGTTCTACGTGCTGTTCTTCATGACCCAGATGCTCAAGATGGACCCCGCCCAGGCCAACACGCTGCTGATCATCAGCGTGGTGATCGGCGCGCCGTTCTTCGTATTCTTCGGCTGGCTGTCGGACCGTGTTGGGCGCAAGCCGATCCTGATGCTTGGCCTGTTGCTGGCGACGGTGCTGTACTTCCCGTTGTTCAAGGCCCTGAGCCACTACGCCAACCCGCAGATCGATGCCGCCAGCCGCCAGGCACCGATTGTCGTCACCGCCGACCCCAAAGGCTGCACCTTCCAGTTCGACCCGGTGGGCAAGGCGCGCTTCGACAGCCCGTGCGACAAGGTCAAGACGTTCCTGGTCAAACAGGGCCTGCCCTATAGCTCGGTGAATGTCGGCGGCAGCGAGGTGATCGTCAGCATCGGTGACAAGACCATCAATGGCTTCGACGAGACGGCCATGCGCAGTGCCATCGATGCGGCGGGTTATCCGGCCAAGGCAGACCCGGCGAACGTGAACCAGGTAATGGTGGTGGTGCTGATCGTCGCCATGATCCTGATCGCCACCATGACCTACGGGCCTCTGGCGGCGGTGATGGTCGAGCTGTTCCCCACGCGTATTCGCTATACCTCGATGTCCCTGCCCTATCACATCGGTAACGGTTGGTTCGGGGGCTTCCTGCCAACGGTGTCGTTCGCGTTGGTGGTGTATACCGGGGATATCTTCTATGGGTTGTGGTATCCGGTGCTAATCACCGGGGTGAGCCTGGTGGTGGGGATCTTCTGTTTGAAAGAGACCCGGGATGTGGATATCGACAAGGTGTGA,MSDYIQEQGAAASSPSRREERKIIFASSLGTVFEWYDFFLYGALAAVISKQFFAGVNDTTAFIFALMAFAAGFLVRPFGALVFGRLGDMIGRKYTFLVTIVLMGLSTFAVGLLPTYASIGIAAPIILVVLRMLQGLALGGEYGGAATYVAEHAPHGKRGFHTGFIQSTATLGLLLSLTVVLASRYISGDQFETWGWRLPFLLSIVLLAISTWIRMSMHESPAFVKMKAQGKVSKSPIRESFTSWPNLKVVLTALFSINAGQAVTFYTAQFYVLFFMTQMLKMDPAQANTLLIISVVIGAPFFVFFGWLSDRVGRKPILMLGLLLATVLYFPLFKALSHYANPQIDAASRQAPIVVTADPKGCTFQFDPVGKARFDSPCDKVKTFLVKQGLPYSSVNVGGSEVIVSIGDKTINGFDETAMRSAIDAAGYPAKADPANVNQVMVVVLIVAMILIATMTYGPLAAVMVELFPTRIRYTSMSLPYHIGNGWFGGFLPTVSFALVVYTGDIFYGLWYPVLITGVSLVVGIFCLKETRDVDIDKV,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 4.2.A.1 : The Major Facilitator Superfamily (MFS) ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ;",,,,,,,,Cytoplasmic Membrane,Class 3,,TIGR00883,2A0106,metabolite:proton symporter family protein,subfamily,1.20E-102,,Transport and binding proteins,Unknown substrate,PF00083PF07690,"Sugar_tr, Sugar (and other) transporter..MFS_1, Major Facilitator Superfamily..",COG2814,"AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].",Carbohydrate transport and metabolism,
NC_008027,Chromosome,PSEEN0014,YP_605826,104779328,Protein,16896,16126,hdtS,,N-acylhomoserine lactone synthase,,Class 2,ATGTCGATCCTGCAGGCGATCAGAATCTTTCTTTTTTACCTGCTGTTGGGCACCAGTTCGCTGCTGTGGTGCTCGCTGAGCTTCTTCGTCGCGCCTTTCCTGCCGTTCCCCAAGCGCTACAAGTTCATCAACGTGTACTGGTGCCGCTGCGCGCTGTTCCTGGTGAAGACGATCCTCGGGATCGACTACAAGATCACCGGCGCCGAACATGTGCCTGATGTGCCGTGCGTGATCCTGTCGAACCACCAGAGCACCTGGGAGACGTTCTTCCTTTCGGCGTACTTCTCGCCGCTGAGCCAGGTACTCAAGCGCGAGCTGCTGTACGTGCCGTTCTTCGGCTGGGCCATGGCCATGCTGCGACCGATCGCCATCGACCGGAAGAACCCGAAAGAGGCCTTGCGCCAGGTTGCCAGCCAGGGTGACGAGTTGCTCAAACAGGGCACCTGGGTGCTGATCTTCCCCGAAGGCACCCGCGTGCCCCACGGCCAGATGGGCAAGTTCTCCCGCGGTGGCACCGCGCTCGCAGTGAATGCCGGCCTGCCGGTGCTGCCGATCGCCCACAACGCCGGCAAGTTCTGGCCCCGTGAAGGCTGGGGCAAGCGCCCGGGCACCATCGAGGTGGTAATTGGCGCGCCGATGTACCCGGAAGGGACGGGGCCACGGGCCATTGCCGAGCTCAACGACCGCGCCCAGGCGTGGAACGAGGCAGCCCAGCGGGCCATGGGTTCGCTGCCGCCGGTGGCGGAAAATCCGGAACAGCAGCACGCCTGA,MSILQAIRIFLFYLLLGTSSLLWCSLSFFVAPFLPFPKRYKFINVYWCRCALFLVKTILGIDYKITGAEHVPDVPCVILSNHQSTWETFFLSAYFSPLSQVLKRELLYVPFFGWAMAMLRPIAIDRKNPKEALRQVASQGDELLKQGTWVLIFPEGTRVPHGQMGKFSRGGTALAVNAGLPVLPIAHNAGKFWPREGWGKRPGTIEVVIGAPMYPEGTGPRAIAELNDRAQAWNEAAQRAMGSLPPVAENPEQQHA,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 5.6.3 : Cell killing ;function prediction: 3.1.2.4.4 : Quorum sensing ;function prediction: 1.6.1 : Phospholipid ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ;",,,,,,,,Unknown,Class 3,,TIGR00530,AGP_acyltrn,1-acyl-sn-glycerol-3-phosphate acyltransferases,subfamily_domain,2.80E-28,2.3.1.51,Fatty acid and phospholipid metabolism,Biosynthesis,PF01553,"Acyltransferase, Acyltransferase. This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function. This family also includes tafazzin, the Barth syndrome gene..",COG0204,"PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism].",Lipid metabolism,
NC_008027,Chromosome,PSEEN0015,YP_605827,104779329,Protein,17459,16962,,,histidinol-phosphatase,,Class 3,GTGATCAACCACGACTCCGACGCCTACATCAAGTCGCTGGAGGAGTGGGTTCCCATTCCCGGCTCGATCGAGGCCATCGCGCAGTTGAGCAAGGCGGGCTGGACGGTGGCTGTTGCCACCAACCAGTCCGGCATTGCCCGTGGCTACTACCCGCTGGAAACCCTCGAGGCCATGCATGCGCGCCTGCGCGCGCTGGTGGCCGAGCTGGGCGGCGAGGTTGGCTTGATCGTGCATTGCCCGCACGGCCCGGATGAAGGCTGCGATTGCCGCAAGCCCAAGCCCGGCATGCTGCGGGCAATCGCCGAGCACTACCAGGTACCGCTGGCCGGCGTATGGTTCGTCGGCGACAGCAAAGGTGACCTGGAGGCGGCCCTGGCCGTCGATGCACAACCCGTGTTGGTAAAAACCGGCAAGGGCGAAAGGACCCTGGAAAAAGGCGTCCCGGAAACTACACTGATTTTCGACGATCTGGCAGCCATCGCCAGAGAACTTATTTAA,MINHDSDAYIKSLEEWVPIPGSIEAIAQLSKAGWTVAVATNQSGIARGYYPLETLEAMHARLRALVAELGGEVGLIVHCPHGPDEGCDCRKPKPGMLRAIAEHYQVPLAGVWFVGDSKGDLEAALAVDAQPVLVKTGKGERTLEKGVPETTLIFDDLAAIARELI,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.5.1.16 : Histidine ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ;",,,,,,3.1.3.15 ;,,Cytoplasmic,Class 3,,TIGR01656,Histidinol-ppas,histidinol-phosphate phosphatase family domain,No data,2.20E-40,,No data,No data,PF00702PF08645,"Hydrolase, haloacid dehalogenase-like hydrolase. This family are structurally different from the alpha/ beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment. The rest of the fold is composed of the core alpha/beta domain..PNK3P, Polynucleotide kinase 3 phosphatase. Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin..",COG0241,"HisB, Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism].",Amino acid transport and metabolism,
NC_008027,Chromosome,PSEEN0016,YP_605828,104779330,Protein,19548,17494,glyS,,"glycyl-tRNA synthetase, beta chain",,Class 2,ATGAGTGCTCAAGATTTCCTGGTTGAACTGGGCACCGAAGAGCTGCCACCGAAGGCCCTGGCCTCGTTGGGCGATGCGTTCCTCGCCGGCATCGAGAAAGGCTTGCAGGCCGCCGGCCTGAACTACACCAGCAAGCAGGTCTACGCCGCGCCGCGCCGCCTGGCCGTGCTGCTGCGCCAGCTGGACGTGCAACAGCCGGATCGCAGCATCAACATCGACGGCCCGCCCCGCCAGGCGGCCTTCGACGCCGAAGGCAACCCGACTCAAGCCGCCCTGGGCTTCGCCAAGAAGTGCGGCGTGGAGCTGTCGGACATCGACCAGAGCGGCCCGAAGCTGCGCTTCTCGCAGCACATTCCGGGCAAGGCCACCGCCAGCCTGCTGCCCACCATCGTTGAGGATTCGCTCAACGACCTGCCGATCCCCAAGCGCATGCACTGGGGCGCCAGCCGTGAAGAGTTCGTGCGCCCGACGCAATGGCTGGTGATGCTGCTCGGCGACCAGGTCGTCGACTGCACCATCCTCGCCCAGAAAGCCGGCCGTGAATCCCGTGGCCACCGCTTCCACCACCCTGAGAACGTGGTCATCACCACCCCGGCCAACTACGTCGAAGACCTGCGCAAAGCCTACGTGCTGGCCGACTTCGCCGAGCGTCGCGAGCTGATCAGCAAGCGCACCGCGGAACTGGCCATGCAGCAGGAAGGCTCGGCCATCGTGCCGCCGGCGCTGCTGGACGAAGTGACCGCCCTGGTCGAGTGGCCGGTGCCGCTGGTGTGCTCGTTCGAGGAGCGTTTCCTCGAGGTGCCGCAGGAAGCCCTGATCACCACCATGCAGGACAACCAGAAGTACTTCTGCCTGCTGGACAGTGAAGGCAAGCTGCTGCCGCGCTTCATCACCGTGGCCAACGTCGAGAGCCGCGATCCGAAGCAGATCGTCGAAGGCAACGAGAAGGTCGTGCGCCCACGCCTGACCGACGCCGAGTTCTTCTTCAAGCAAGACAAGAAGCAACCGCTGGAAAGCTTCAACGAGCGCCTGAAGAACGTGGTGTTCCAGGCTCAGCTGGGCACCGTGTTCGACAAGGCCGAGCGCGTGTCGAAACTGGCTGCCTTCATTGCCCCGTACATCGGCGGCAGCGCCGCCAACGCTGGCCGTGCCGGCCTGCTGTCCAAGTGCGACCTGGCCTCGGAGATGGTCGGTGAATTCCCTGAAATGCAGGGTATCGCCGGCTACTACTACGCCCTCAACGACGGTGAGCCGCAAGACGTCGCCCTGGCACTGAACGAGCAGTACATGCCGCGCGGCGCTGGCGCCGAGCTGCCGCAAACCCTCACCGGTGCCGCCGTGGCCATCGCCGACAAGCTCGACACCCTGGTCGGCATCTTCGGCATCGGCATGCTGCCCACCGGCAGCAAGGATCCGTACGCCCTGCGCCGTGCCGCCCTGGGCGTGCTGCGCATCCTGATCGAGAAACAGCTGGACCTGGACCTGACCACCGCGGTCGAGTTCGCGGTCAAGCAGTTCGGCACCAAGGTGAAGGCTGCCGGCTTGTCCGAGCAGGTGCTGGAGTTCATCTTCGACCGCCTGCGCGCGCGTTACGAAGACGAAGGCATCGACGTTGCCACCTACCTGTCGGTGCGTGCCCTGAAGCCGGGCTCGGCCCTGGACTTCGACCAGCGCGTACAGGCCGTGCAGGCCTTCCGCAAGCTGCCGGAAGCCAATGCCCTGGCTGCGGCGAACAAGCGCGTGTCGAACCTGCTGGGCAAGGCCGAAGGCGCCATCGCCGACCAGGTCGAGCCCAAGTACTTCGACAACGCCAACGAGTTCTCGCTGTACTCGGCCATCCAGCAGGCCGACCAGGCCGTGCAGCCGATGGCCTCCGCGCGCCAGTACAACGAAGCCCTGGCCCGCCTGGCCGCCCTGCGCGACCCGGTAGACGCCTTCTTCGAAGCGGTACTGGTCAACGCCGAGGACGCCAAGGTACGCGCCAACCGTTATGCCCTGCTCAGCCGCCTGCGCGGCCTGTTCCTGGGCGTGGCCGATATCTCGCTGCTGGGGTAA,MSAQDFLVELGTEELPPKALASLGDAFLAGIEKGLQAAGLNYTSKQVYAAPRRLAVLLRQLDVQQPDRSINIDGPPRQAAFDAEGNPTQAALGFAKKCGVELSDIDQSGPKLRFSQHIPGKATASLLPTIVEDSLNDLPIPKRMHWGASREEFVRPTQWLVMLLGDQVVDCTILAQKAGRESRGHRFHHPENVVITTPANYVEDLRKAYVLADFAERRELISKRTAELAMQQEGSAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDSEGKLLPRFITVANVESRDPKQIVEGNEKVVRPRLTDAEFFFKQDKKQPLESFNERLKNVVFQAQLGTVFDKAERVSKLAAFIAPYIGGSAANAGRAGLLSKCDLASEMVGEFPEMQGIAGYYYALNDGEPQDVALALNEQYMPRGAGAELPQTLTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLTTAVEFAVKQFGTKVKAAGLSEQVLEFIFDRLRARYEDEGIDVATYLSVRALKPGSALDFDQRVQAVQAFRKLPEANALAAANKRVSNLLGKAEGAIADQVEPKYFDNANEFSLYSAIQQADQAVQPMASARQYNEALARLAALRDPVDAFFEAVLVNAEDAKVRANRYALLSRLRGLFLGVADISLLG,"inference: non-experimental evidence, no additional details recorded ;inference: ab initio prediction:AMIGene:2.0 ;function prediction: 2.3.1 : Amino acid-activation ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ;",,,,,,6.1.1.14 ;,,Unknown,Class 3,GO:0009345 ;,TIGR00211,glyS,"glycyl-tRNA synthetase, beta subunit",equivalog_domain,3.50E-226,6.1.1.14,Protein synthesis,tRNA aminoacylation,PF02092PF05746,"tRNA_synt_2f, Glycyl-tRNA synthetase beta subunit..DALR_1, DALR anticodon binding domain. This all alpha helical domain is the anticodon binding domain in Arginyl and glycyl tRNA synthetase. This domain is known as the DALR domain after characteristic conserved amino acids..",COG0751,"GlyS, Glycyl-tRNA synthetase, beta subunit [Translation, ribosomal structure and biogenesis].","Translation, ribosomal structure and biogenesis",
NC_008027,Chromosome,PSEEN0017,YP_605829,104779331,Protein,20492,19545,glyQ,,"glycyl-tRNA synthetase, alpha chain",,Class 2,GTGAGCCAGCCTACGCCAGCCGTGCGTACCTTCCAAGACCTGATCCTCGCCCTGCAGAACTACTGGGCCGAGCAAGGTTGTGTGGTGCTTCAGCCCTACGATATGGAAGTAGGCGCCGGCACTTTCCATACCGCCACCTTCCTGCGCGCCGTGGGCCCGGAGACGTGGAACGCCGCCTATGTGCAGCCTAGCCGTCGCCCCGCCGACGGACGGTATGGTGAAAACCCCAACCGCCTGCAGCACTACTACCAGTTCCAGGTGGTGCTCAAGCCGAACCCGGCCAACTTCCAGGAGCTGTACCTCGGCTCGCTGAAAGCCATCGGCCTGGACCCGCTGGTTCACGACATCCGTTTCGTCGAAGACAACTGGGAATCGCCAACCCTGGGCGCCTGGGGCCTGGGCTGGGAAATCTGGCTGAACGGCATGGAGGTGACCCAGTTCACCTACTTCCAGCAGGTCGGCGGCATCGAGTGCTACCCGGTCACCGGTGAAATCACCTACGGCCTGGAGCGCCTGGCCATGTACCTGCAGGGCGTGGACTCGGTCTACGACCTGGTGTGGGCCGACGGCCCGTTCGGCAAGGTCACCTACGGCGACGTGTTCCACCAGAACGAAGTGGAGCAGTCGACCTACAACTTCGAGCACGCCAACGTCGAGAAACTGTTCGAGCTGTTCGACTTCTATGAGAGCGAAGCGAACCGCCTGATCAAGCTGGACCTGCCGCTGCCCACCTACGAAATGGTCCTGAAGGCCTCGCACACCTTCAACCTGCTGGACGCCCGCCGCGCCATCTCGGTGACCGAGCGCCAGCGCTACATCCTGCGCGTACGCACGCTCGCCCGTGACGTGGCGCAAAGCTACCTGCAAGCCCGCGCACGCCTGGGCTTCCCGATGGCTTCTCCTGAACTGCGTGACGAAGTGTTGGCTAAGCTGGAGGCTGCACAATGA,MSQPTPAVRTFQDLILALQNYWAEQGCVVLQPYDMEVGAGTFHTATFLRAVGPETWNAAYVQPSRRPADGRYGENPNRLQHYYQFQVVLKPNPANFQELYLGSLKAIGLDPLVHDIRFVEDNWESPTLGAWGLGWEIWLNGMEVTQFTYFQQVGGIECYPVTGEITYGLERLAMYLQGVDSVYDLVWADGPFGKVTYGDVFHQNEVEQSTYNFEHANVEKLFELFDFYESEANRLIKLDLPLPTYEMVLKASHTFNLLDARRAISVTERQRYILRVRTLARDVAQSYLQARARLGFPMASPELRDEVLAKLEAAQ,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 2.3.1 : Amino acid-activation ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ;",,,,,,6.1.1.14 ;,,Cytoplasmic,Class 3,GO:0009345 ;,TIGR00388,glyQ,"glycyl-tRNA synthetase, alpha subunit",equivalog_domain,6.60E-169,6.1.1.14,Protein synthesis,tRNA aminoacylation,PF02091,"tRNA-synt_2e, Glycyl-tRNA synthetase alpha subunit..",COG0752,"GlyQ, Glycyl-tRNA synthetase, alpha subunit [Translation, ribosomal structure and biogenesis].","Translation, ribosomal structure and biogenesis",
NC_008027,Chromosome,PSEEN0018,YP_605830,104779332,Protein,20577,21128,tag,,"3-methyl-adenine DNA glycosylase I, constitutive",,Class 2,ATGCCACGCTGCTTTTGGTGTTCCGACGATCCTTTGTACGAGGCCTATCACGACCACGAGTGGGGAACGCCGCAGCGCGACCCGGCGTTGCTCTTCGAGATGCTTTTGCTCGAAGGGTTCCAGGCGGGGCTCTCGTGGATCACCGTATTGAAGAAACGTGAGCGTTATCGTGAAGTGCTGCACGGGTTCGACCCGGTGCAACTGGCGCGCTTGAGCGATGAACGCATCGAGGCGTTGATGCTCGACGCGGGCATCATCCGCAACCGCCTCAAGCTCAAGGCCGTGCGCCGCAACGCCGAGGCCTGGCTGGCTGTGGATAACCCCGCCGAGTGGCTGTGGTCGTTCGTCGGTGGGCAACCGAAGATCAACCATTTCGCCACCCGCAACGATGTGCCGGCGGTGACCGACGAAGCCAAGGCCATGAGCAAGGCCCTGCAGAAGGCCGGCTTCACGTTCGTTGGCCCGACCATCTGCTACGCCTTCATGCAGGCCACCGGCATGGTCATGGACCACACCACCGACTGTGATCGCTACGCCGCGCTGGCGCGCTGA,MPRCFWCSDDPLYEAYHDHEWGTPQRDPALLFEMLLLEGFQAGLSWITVLKKRERYREVLHGFDPVQLARLSDERIEALMLDAGIIRNRLKLKAVRRNAEAWLAVDNPAEWLWSFVGGQPKINHFATRNDVPAVTDEAKAMSKALQKAGFTFVGPTICYAFMQATGMVMDHTTDCDRYAALAR,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 2.1.4 : DNA repair ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ;",,,,,,3.2.2.20 ;,,Cytoplasmic Membrane,Class 3,GO:0008725 ;,TIGR00624,tag,DNA-3-methyladenine glycosylase I,subfamily,1.40E-120,3.2.2.20,DNA metabolism,"DNA replication, recombination, and repair",PF03352,"Adenine_glyco, Methyladenine glycosylase. The DNA-3-methyladenine glycosylase I is constitutively expressed and is specific for the alkylated 3-methyladenine DNA..",COG2818,"Tag, 3-methyladenine DNA glycosylase [DNA replication, recombination, and repair].","DNA replication, recombination, and repair"
NC_008027,Chromosome,PSEEN0019,YP_605831,104779333,Protein,21170,22057,,,lipid A biosynthesis lauroyl acyltransferase,,Class 3,GTGGAAAAGTTCAAGGGCGCCCTGATGGTCGGGGTGCTGCGCCTGTTTGCCAAGCTGCCCTGGGGCGCTGTGCAGCGCGTCGGCGCCGGTATCGGCTGGCTTATGTGGAAAGTCCCCAATGGCTCGCGCAATGTCGTGCGCATCAACCTGGCCAAGTGTTTCCCGGAGATGGACCCGGTTGAGCGCGAGCAACTGGTGGGTCGTGCGTTGAAGGATATCGGCAAGTCGTTCGTCGAGAGCGCCTGCGCCTGGATCTGGCCACCGCAGCGCTCGCTGGAACTGGTCAAGGAAGTGCACGGCCTGGAAGTGCTGGAGCAGGCCCTGGCCTCGGGCAAGGGCGTGGTGGGCATCACCAGCCACCTGGGCAACTGGGAAGTGCTCAACCACTTCTATTGCAACCAGTGCAAACCGATCATCTTCTATCGCCCGCCCAAGTTGAAGGCGGTGGATGACCTGCTGCGTGAGCAGCGCGTGCAGATGGGCAACCGCGTGGCGCCCTCGACCAAGGAAGGCATTCTCAGCGTGATCAAGGAAGTGCGCCGGGGTGGGCAGGTGGGGATTCCCGCGGATCCGGAGCCGGCCGAGTCGGCGGGTGTGTTCGTGCCGTTCCTCGGTACCCAGGCACTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGCGGCAAGGCGGTCGGGGTGTTCCTGCATGCCCTGCGGTTGCCGGATGGGTCAGGCTTCAAGGTGTTCCTCGAGGCGGCGCCGGAAGAGATGTACAGCGAGGATGTGACGGTAGCGGCGGCGGCCATGAGCAAGGTGGTCGAGCGTTATGTGCGCGAGTATCCGAGCCAGTACATGTGGAGCATGAAGCGCTTCAAGAAGCGCCCGGCGGGCGAGGCGCGCTGGTATTGA,MEKFKGALMVGVLRLFAKLPWGAVQRVGAGIGWLMWKVPNGSRNVVRINLAKCFPEMDPVEREQLVGRALKDIGKSFVESACAWIWPPQRSLELVKEVHGLEVLEQALASGKGVVGITSHLGNWEVLNHFYCNQCKPIIFYRPPKLKAVDDLLREQRVQMGNRVAPSTKEGILSVIKEVRRGGQVGIPADPEPAESAGVFVPFLGTQALTSKFVPNMLAGGKAVGVFLHALRLPDGSGFKVFLEAAPEEMYSEDVTVAAAAMSKVVERYVREYPSQYMWSMKRFKKRPAGEARWY,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.6.3.3 : Lipid A ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ;",,,,,,,,Cytoplasmic Membrane,Class 3,GO:0009245 ;,TIGR02207,lipid_A_htrB,lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase,subfamily,6.30E-17,2.3.1.-,Cell envelope,Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides,PF03279,"Lip_A_acyltrans, Bacterial lipid A biosynthesis acyltransferase..",COG1560,"HtrB, Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane].","Cell envelope biogenesis, outer membrane"
NC_008027,Chromosome,PSEEN0021,YP_605832,104779334,Protein,22489,22181,,,hypothetical protein,,Class 4,ATGCGTGAATCGCTGGAGAAAATGCTGGCCAAGGGTGTGGATAACCCGCTGCTGCGGTTCGGGCTGGGCAAGGCCTGGCTGGACGAGGGCAATGGCGCTGAAGCGGCGGTGCACCTGGCGGCTTGTGTGCGGCAGGATCCGAAGTACTCGGCGGCGTGGAAGCTGCTGGGGAAGGCGTATCAGCTCAGCGGCGATCTGGCTGGCGCGCGCACGGCCTGGGAAGAGGGGATCGTCGCGGCGCAGGCCCATGGCGACAAGCAGGCCGAGAAAGAGATGACCGTTTTCCTCAAGAAGCTCAACAAGGCTTGA,MRESLEKMLAKGVDNPLLRFGLGKAWLDEGNGAEAAVHLAACVRQDPKYSAAWKLLGKAYQLSGDLAGARTAWEEGIVAAQAHGDKQAEKEMTVFLKKLNKA,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 4 : Homologs of previously reported genes of unknown function ;",,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,,,COG4783,"COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only].",General function prediction only
NC_008027,Chromosome,PSEEN0022,YP_605833,104779335,Protein,23874,22501,trkA,,"potassium transport protein, NAD(P)-binding (Trk family)",,Class 2,ATGAAGATCATCATCCTCGGCGCAGGGCAGGTGGGCGGCACGCTGGCGGAACACCTGGCCAGCGAAGCCAACGACATCACCGTGGTCGACACCGACAGCGAGCGCCTGCGCGACCTGGGCGACCGCCTGGACATCCGCACCGTGCAGGGCCGCGCGTCGCTGCCGACGGTACTGCGCCAGGCCGGCGCCGACGACGCCGACATGCTGGTGGCGGTAACCAACAGTGACGAGACCAACATGGTCGCCTGCCAGGTCGCCTACTCGCTGTTCCACACCCCGACCAAGATCGCCCGGGTACGCGAGTCGGCCTACCTCACCCGTGAAGAGCTGTTCGACAACGACCACATCCCGGTGGACGTGCTGATCAGCCCCGAGCAGGTGGTGACCAACTACATCAAGCGCCTGATCGAACACCCAGGTTCGCTGCAGGTGATCGACTTCGCCGAGGGCAAGGCCCAGCTGGTGGCGGTCCGGGCCTACTACGGCGGCCCGCTGGTGGGCCAGCAACTGCGCCAGATCCGCGCCCACATGCCCAATGTCGACACCCGCGTGGCGGCGATCTTCCGCCGCGACCGGCCGATCACCCCGCAGGGCGACACGGTGATCGAGGCCGACGACGAAGTGTTCTTCATCGCCGCGAAGAAGGACATCCGCGCAGTGATGGGTGAGCTGCGTCGCATCGACGAGACCAACAAGCGCGTGGTCATCGCCGGTGGCGGGCAGATCGGCGAGCGCCTGGCCGAGGCCATCGAGAGCCGCTACCAGGTGAAGATCATCGAGATGAACCCGGCACGCTGCCGCCACCTCTCGGAAAACCTCGAGAGCACCGTGGTGCTCCAAGGCAGTGCGTCCGACCGGGACCTGATGCTCGAAGAAAACATCGCCGACGCCGACATCTTCCTGGCCCTGACCAACGACGACGAGGCCAACATCATGTCGTCGCTGCTGGCCAAGCGCTTGGGTGCGCGCAAGGTGATGACCATCATCAACAACCCGGCCTACGTCGACCTGGTGCAGGGCGGCGAGATCGACATCGCCATCAGCCCGCAGCTGGCCACCATCGGCACCTTGCTGGCCCACGTGCGCCGCGGCGATATCGTCAGCGTGCACTCGCTGCGCCGGGGCGCGGCCGAGGCCATCGAGGCGGTGGCCCATGGCGATTCGAAGTCGAGCAAGGTGGTGGGCAAGGCCATCGAGGACATCTCGTTGCCGCCAGGCACCACCATCGGCGCGATCATCCGCGACGAGGAAGTGCTGATCGCCCACGATGACACGGTGATCGCGTCGGGCGACCATGTGATCCTGTTCGTTGTGGATAAAAAGCAGATTCGAGACGTGGAGAAACTGTTCCACGTGGGCCTGAGTTTCTTCTAG,MKIIILGAGQVGGTLAEHLASEANDITVVDTDSERLRDLGDRLDIRTVQGRASLPTVLRQAGADDADMLVAVTNSDETNMVACQVAYSLFHTPTKIARVRESAYLTREELFDNDHIPVDVLISPEQVVTNYIKRLIEHPGSLQVIDFAEGKAQLVAVRAYYGGPLVGQQLRQIRAHMPNVDTRVAAIFRRDRPITPQGDTVIEADDEVFFIAAKKDIRAVMGELRRIDETNKRVVIAGGGQIGERLAEAIESRYQVKIIEMNPARCRHLSENLESTVVLQGSASDRDLMLEENIADADIFLALTNDDEANIMSSLLAKRLGARKVMTIINNPAYVDLVQGGEIDIAISPQLATIGTLLAHVRRGDIVSVHSLRRGAAEAIEAVAHGDSKSSKVVGKAIEDISLPPGTTIGAIIRDEEVLIAHDDTVIASGDHVILFVVDKKQIRDVEKLFHVGLSFF,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 6.1 : Membrane ;function prediction: 7.3 : Inner membrane ;function prediction: 4.2.A.38 : The K+ Transporter (Trk) Family ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ;",,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,PF02254PF02080,"TrkA_N, TrkA-N domain. This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD..TrkA_C, TrkA-C domain. This domain is often found next to the pfam02254 domain. The exact function of this domain is unknown. It has been suggested that it may bind an unidentified ligand. The domain is predicted to adopt an all beta structure..",COG0569,"TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism].",Inorganic ion transport and metabolism
NC_008027,Chromosome,PSEEN0023,YP_605834,104779336,Protein,25210,23900,sun,,Ribosomal RNA small subunit methyltransferase B (rRNA (cytosine-C(5)-)-methyltransferase) (16S rRNA m5C967 methyltransferase),,Class 2,ATGAACCCACGCCTGGCCGCCGCCCGTGCCCTTGCCGCCGTGCTCAGCGGCAAGGCCTCGCTGAACAGCTCGCTGCCGGCGCAACTGGACAAGGTCGACGAGCGCGACCGTGGCCTGACCCAGGACCTAGCCTTCGGCACCGCCCGCTGGCAGCCACGCCTGGACCTGCTGGCCGCGCAACTGCTGCAGAAGCCGTTCAAGGCCGCCGATGCCGATGTGCAGGCGCTGCTGCTGGTCGGCCTGTACCAGCTGTTCTACACGCGCATCCCGGCACACGCCGCCCTCGGCGAGACCGTCGGCTGCGCCGACAAGCTCAAGAAGCCATGGGCCAAGGGCCTGCTCAACGCCGTGCTGCGCCGCGCCCAGCGTGAAGGCGAGGAACTGCTCGCCAGCATGGAACGCGACCCGGTGGTGCGCACCGCCCACCCGCGCTGGCTGCAGAAGTCGCTGAAAGCCTTCTGGCCGGAGCAGTGGGAAGCCATCTGCGCCGCCAACAACGCCCACCCGCCGATGATTCTGCGGGTCAATCGCCGCCACCACAGCCGTGACGCCTACCTGTCGTTGCTGGCCGAGGCCGGCATCCAGGCCAGCGCCTGCCAGTTCAGCCGTGACGGCATCGTCCTGGCCGAAGCCTGCGACGTGCGTGGCCTGCCGGGCTTCGCCGACGGTTGGGTGAGCGTGCAGGACGAAGCCGCGCAGCTGTCCGCCGACCTGCTGGAACTGGCCCCCGGCCAGCGCGTGCTCGACGCCTGCTGCGCCCCGGGCGGCAAGACCTGCCACCTACTGGAAGCCGAACCCGGCCTGGCCCACATGGTCGCCATCGACCTGGAAGCCAAGCGACTGGCCCGCGTGCGCGAGAACCTCGACCGCCTGAAGCTCGACGCGGAGCTGATCGCCTGCGACGCCCGTGACACCGCCAGCTGGTGGGACGGCAAGCCATTCCAGCGCATCCTGCTCGACGCGCCATGCTCGGCCACCGGTGTGATCCGCCGTCACCCGGACATCAAGCTGACCCGTCAGGCCGAGGACATCCCGGCCCTGGCCACGCTGCAAGGCGAGCTGCTCGATGCCCTGTGGCCGACCCTGGAAGTGGGCGGCATGTTGCTCTACGCCACCTGCTCGAGCCTGCCGACCGAGAACACCGAAGTGATCGACGCCTTCCTCGCCCGCACCCCCGGTGCCCGCGAGCTGGACCTGGCCACCGAAGCCGGCCTGCGCCAGCCCCACGGCCGCCAGCTGCTGGCCCAGGAAGGCGGCCATGACGGGTTCTATTACGCCAAACTGATCAAGATCGCCGCTTCGCGCGGGTAA,MNPRLAAARALAAVLSGKASLNSSLPAQLDKVDERDRGLTQDLAFGTARWQPRLDLLAAQLLQKPFKAADADVQALLLVGLYQLFYTRIPAHAALGETVGCADKLKKPWAKGLLNAVLRRAQREGEELLASMERDPVVRTAHPRWLQKSLKAFWPEQWEAICAANNAHPPMILRVNRRHHSRDAYLSLLAEAGIQASACQFSRDGIVLAEACDVRGLPGFADGWVSVQDEAAQLSADLLELAPGQRVLDACCAPGGKTCHLLEAEPGLAHMVAIDLEAKRLARVRENLDRLKLDAELIACDARDTASWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQAEDIPALATLQGELLDALWPTLEVGGMLLYATCSSLPTENTEVIDAFLARTPGARELDLATEAGLRQPHGRQLLAQEGGHDGFYYAKLIKIAASRG,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 2.2.3 : RNA modification ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ;",,,,,,2.1.1.- ;,,Cytoplasmic,Class 3,GO:0016434 ;,TIGR00563,rsmB,sun protein,equivalog,9.00E-135,2.1.1.-,Protein synthesis,tRNA and rRNA base modification,PF01189PF01029,"Nol1_Nop2_Fmu, NOL1/NOP2/sun family..NusB, NusB family. The NusB protein is involved in the regulation of rRNA biosynthesis by transcriptional antitermination..",COG0144,"Sun, tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis].","Translation, ribosomal structure and biogenesis"
NC_008027,Chromosome,PSEEN0024,YP_605835,104779337,Protein,26139,25207,fmt,,methionyl-tRNA formyltransferase,,Class 2,ATGCGCATCGTCTTCGCAGGCACTCCAGAGTTTGCCGCCGAACACCTCAAGGCCCTGCTCGACAGCCCGTACGAGATCGTGGCCGTCTACACCCAGCCCGACCGCCCGGCTGGCCGTGGCCAGAAGCTCATGCCGAGCGCAGTGAAGGCACTGGCCGTTGCCCACGACATCCCGGTGTACCAGCCGCAGACCCTGCGCAACCCCGAGGCGCAAGCCGAGCTCGCCGCGCTCAAGCCGGACCTGATGGTGGTGGTCGCCTATGGCCTGATCCTGCCGCAAGTGGTGCTGGATATTCCGCGCCTGGGTTGCATCAACAGCCATGCCTCCCTGCTGCCGCGCTGGCGCGGGGCGGCGCCGATCCAGCGTGCCGTGGAAGCCGGCGACGCCGAGAGCGGCGTGACCGTGATGCGTATGGAAGCGGGCCTGGATACCGGCCCGATGTTGCTCAAGGTGGTTACCCCGATCAGCGCCGAGGACACTGGCGGCACCCTGCACGACCGCCTCGCCGCCATGGGCCCGGGCGCCGTGGTGCAGGCCATCGCCGGCCTGGCCGACGGTTCGCTGCAAGGTGAAGTACAGGACGATACCCTGGCCACTTATGCACACAAGCTGAACAAGGACGAGGCGCGCATCGACTGGAACCGCCCAGCCGTCGAACTGGAACGCCTGATCCGTGCCTTCAACCCGTGGCCGGTGTGCCACAGCACCCTCGACGGCGAAAGCGTGAAGGTGCTGGCCGCCAACTTGTCCACAGGCAAGGGCACTCCTGGTGAGATCCTCTCCGCCAGCAAGGACGGCCTGGTCGTCGCCTGCGGTGATGGCGCCCTGAGCCTGACCCGCCTGCAACTGCCCGGCGGCAAGGCCCTGGCCTTCAGCGACCTGTTCAACAGCCGCCGCGAGAAGTTCGCCGGTGGCAAGGTGCTCGGCCAATGA,MRIVFAGTPEFAAEHLKALLDSPYEIVAVYTQPDRPAGRGQKLMPSAVKALAVAHDIPVYQPQTLRNPEAQAELAALKPDLMVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAAPIQRAVEAGDAESGVTVMRMEAGLDTGPMLLKVVTPISAEDTGGTLHDRLAAMGPGAVVQAIAGLADGSLQGEVQDDTLATYAHKLNKDEARIDWNRPAVELERLIRAFNPWPVCHSTLDGESVKVLAANLSTGKGTPGEILSASKDGLVVACGDGALSLTRLQLPGGKALAFSDLFNSRREKFAGGKVLGQ,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 2.2.5 : tRNA ;function prediction: 2.3.2 : Translation ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ;",,,,,,2.1.2.9 ;,,Unknown,Class 3,GO:0006431 ;,TIGR00460,fmt,methionyl-tRNA formyltransferase,equivalog,1.10E-126,2.1.2.9,Protein synthesis,tRNA aminoacylation,PF00551PF02911,"Formyl_trans_N, Formyl transferase. This family includes the following members. Glycinamide ribonucleotide transformylase catalyses the third step in de novo purine biosynthesis, the transfer of a formyl group to 5'-phosphoribosylglycinamide. Formyltetrahydrofolate deformylase produces formate from formyl- tetrahydrofolate. Methionyl-tRNA formyltransferase transfers a formyl group onto the amino terminus of the acyl moiety of the methionyl aminoacyl-tRNA. Inclusion of the following members is supported by PSI-blast. HOXX_BRAJA (P31907) contains a related domain of unknown function. PRTH_PORGI (P46071) contains a related domain of unknown function. Y09P_MYCTU (Q50721) contains a related domain of unknown function..Formyl_trans_C, Formyl transferase, C-terminal domain..",COG0223,"Fmt, Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis].","Translation, ribosomal structure and biogenesis"
NC_008027,Chromosome,PSEEN0025,YP_605836,104779338,Protein,26709,26203,def-1,,peptide deformylase 1,,Class 2,ATGGCCATCTTGAACATTCTCGAATTCCCCGATCCGCGCCTGCGCACCATTGCCAAACCGGTAACGGAGTTCGACGACGCCCTGCGCCAGTTGATCGACGACATGTTCGAGACCATGTACGAAGCCCCTGGCATCGGCCTGGCGGCCACCCAGGTCAACGTGCACAAGCAGGTCGTGGTGATGGACCTGAGCGAAGACCGCAGCGAACCGCGCGTCTTCATCAACCCCACGGTCGAGGAGCTGACCCACGACATGGGCCAGTACCAGGAAGGCTGCCTGTCGGTGCCCGGCTTCTACGAAAACGTAGACCGCCCGCTGCGTGTGCGGGTCAAGGCCCAGGACCGCGACGGCAAGCCCTATGAACTCGAAGCCGAAGGCCTGCTGGCCGTATGCGTGCAGCACGAGTTCGACCACCTCAACGGCAAGCTGTTCGTCGACTACCTGTCCCAGCTCAAACGCGACCGGATCAAGAAGAAGCTGGAAAAGCAGCACCGCCAGCAAGCCTGA,MAILNILEFPDPRLRTIAKPVTEFDDALRQLIDDMFETMYEAPGIGLAATQVNVHKQVVVMDLSEDRSEPRVFINPTVEELTHDMGQYQEGCLSVPGFYENVDRPLRVRVKAQDRDGKPYELEAEGLLAVCVQHEFDHLNGKLFVDYLSQLKRDRIKKKLEKQHRQQA,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 2.3.3 : Posttranslational modification ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ;",,,,,,3.5.1.88 ;,,Cytoplasmic,Class 3,GO:0042586 ;,TIGR00079,pept_deformyl,peptide deformylase,equivalog,7.40E-77,3.5.1.88,Protein fate,Protein modification and repair,PF01327,"Pep_deformylase, Polypeptide deformylase..",COG0242,"Def, N-formylmethionyl-tRNA deformylase [Translation, ribosomal structure and biogenesis].","Translation, ribosomal structure and biogenesis"
NC_008027,Chromosome,PSEEN0026,YP_605837,104779339,Protein,26917,28014,,,"Smf protein, DNA processing chain A",,Class 3,ATGACCGAACCCCGTTCGTCGCCTTGTTCGCCTGCCGAACTCGAGGCGCGGTTGCGTCTGCATCGGCTTCCCGATGCCGGGCTGCGTCGTTTTCACACCCTCATCGAAGCTTTCGGCAGCGCCTCGTCGGCGCTCACTGCGCCAGCAAGTGCCTGGCGTGCCCTGGGGCTGCCGGCAGCCAGTATCGACGCCCGGCGCAGCCCTGAAGTGCGCGATGGGGCATTGGCCGCAATGGCCTGGTTAGAGCGGCCGGGCCAGCATTTACTGATGTGGGACGAGCCTGGCTACCCGGCGTTGCTGGCCGAGATAGACGATCCGCCGCCCTTGCTGTTCGTCGCTGGAAACCCTGCTTTGCTCGAGCGACCGCAGCTTGCGATTGTGGGCAGCAGGCGTGCTTCACCCCCGGCGCTGGATACGGCGGGCGCGTTTTCCCGTTGCCTTTCCCAGGCCGGGTTCACCATCACCAGCGGGCTGGCGCTGGGCGTGGACGGTGCCGCTCATCGGGCCGCGTTGAAGGCCGGTGGGTACACGATCGGGGTGCTGGGCACGGGGTTGCAAAAATGTTATCCACAGCGCCATCGTGACTTGGCACGGATGATGATCGACAGCGGTAGCGCGCTGGTTTCCGAGTACCCGCTGGACGCCGGGCCGCTGGCGGGTAACTTCCCACGGCGCAATCGGATCATCAGTGGCTTGTCGCTGGGTGTACTGGTGGTCGAGGCCAGCCTGGCCAGCGGCTCGTTGATCACCGCGAGGCTTGCTGCCGAACAGGGGCGGGAGGTGTATGCGATTCCAGGCTCCATCCACCACCCTGGCGTCAAAGGCTGCCACCAGTTGATCCGCGATGGCGCCCTGCTGGTGGAAAGCGTGGAGCAGATCCTCGACAGCCTGGGCGGCTGGCAGAACCTGCCGCCCGCTGTTGTGGATAAACCCGCTCACCCCCTCCTCGCCCTGCTTCATGCCGCGCCCCAGACCAGCGAGGGCCTGGCCCACAGCAGCGGCCTGCCGCTGGCCCAGGTACTGGCCAGCCTGACCGAGCTGGAGCTCGAAGGCCGGGTCAGCAATGAAGCCGGGCGTTGGTTTGCCCGTGCCGGCTAA,MTEPRSSPCSPAELEARLRLHRLPDAGLRRFHTLIEAFGSASSALTAPASAWRALGLPAASIDARRSPEVRDGALAAMAWLERPGQHLLMWDEPGYPALLAEIDDPPPLLFVAGNPALLERPQLAIVGSRRASPPALDTAGAFSRCLSQAGFTITSGLALGVDGAAHRAALKAGGYTIGVLGTGLQKCYPQRHRDLARMMIDSGSALVSEYPLDAGPLAGNFPRRNRIISGLSLGVLVVEASLASGSLITARLAAEQGREVYAIPGSIHHPGVKGCHQLIRDGALLVESVEQILDSLGGWQNLPPAVVDKPAHPLLALLHAAPQTSEGLAHSSGLPLAQVLASLTELELEGRVSNEAGRWFARAG,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 5.4 : Genetic exchange, recombination ;function prediction: 5.11 : DNA uptake ;function prediction: 2.1 : DNA related ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ;",,,,,,,,Unknown,Class 3,,TIGR00732,dprA,DNA protecting protein DprA,equivalog,1.00E-102,,Cellular processes,DNA transformation,PF02481,"SMF, SMF family. The SMF family (DNA processing chain A, dprA) are a group of bacterial proteins. In H. pylori, dprA is required for natural chromosomal and plasmid transformation..",COG0758,"Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion].","DNA replication, recombination, and repair / Intracellular trafficking and secretion"
NC_008027,Chromosome,PSEEN0027,YP_605838,104779340,Protein,28054,28611,,,hypothetical protein,,Class 4,ATGGTGAGCAGTTGGCGTGTGCAGCAAGCCGCGCGCGAGGTGAAGGCGGGTGCGGTGATCGCCTATCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCGTGGAACGAGGACGCGGTGTATCGCCTGCTGGCGCTCAAGTCGCGGCCTGTGGATAAAGGGCTGATCCTGATCGCCGACAACATCCGCCAGTTCGACTTTCTGTTCGAGGATTTCCCGCAGGATTGGATTGATCGCATGAGCGCTACTTGGCCGGGGCCGAACACCTGGCTGGTGCCGCACCAGGACCTGTTGCCCGAGTGGGTGACCGGGCAGCACGACACCGTGGCGCTGCGGGTCAGCGATCACCCACAGGTGCGCGAGCTGTGCGCGTTGGTCGGGCCGTTGATCTCTACCTCCTGCAACCCGGCCGGGCGGCCGGCGGCCAAGAGTAGGTTGCGGGTGGAGCAGTACTTCCACAACGAGCTGGACATGGTGCTGGGTGGGGCGTTGGGTGGGCGGAAGAACCCGAGCCTGATTCGCGACCTGGCGACCGGCGAGGTTGTGCGCCCGGGCTGA,MVSSWRVQQAAREVKAGAVIAYPTEAVWGLGCDPWNEDAVYRLLALKSRPVDKGLILIADNIRQFDFLFEDFPQDWIDRMSATWPGPNTWLVPHQDLLPEWVTGQHDTVALRVSDHPQVRELCALVGPLISTSCNPAGRPAAKSRLRVEQYFHNELDMVLGGALGGRKNPSLIRDLATGEVVRPG,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 4 : Homologs of previously reported genes of unknown function ;",,,,,,,,Unknown,Class 3,,TIGR00057,TIGR00057,Sua5/YciO/YrdC/YwlC family protein,hypoth_equivalog,6.10E-16,,Unknown function,General,PF01300,"Sua5_yciO_yrdC, yrdC domain. This domain has been shown to preferentially bind to dsRNA. The domain is found in SUA5 as well as HypF and YrdC..",COG0009,"SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis].","Translation, ribosomal structure and biogenesis"
NC_008027,Chromosome,PSEEN0028,YP_605839,104779341,Protein,29068,29379,,,hypothetical protein,,Class 4,ATGACCAAAAAGATTGTCCCCGATCCACCACTTCCTAACACCACAACTCACCCCTTCGGCCGCTGCGACGCCGGCCACCCTCCACTCTTCACCGTAAACCCCAACATCGAAGCCCACGACGCCCTGGTACACGTAGCGCTCTACCTGCGCTGTGCCTACGACACCGGCATCAAGGCACTCGACCACCTGCGCGACGAGGGGCGTGGCATGTACTGGTCGAGCCTGCATTCGCTGGAAATGGCGGAGGGGTTGGTGGAGGCGATGCTCGATGGCATCGAGTCCGCGCCGGCAGCCGATAGGCCTGTTGGCTGA,MTKKIVPDPPLPNTTTHPFGRCDAGHPPLFTVNPNIEAHDALVHVALYLRCAYDTGIKALDHLRDEGRGMYWSSLHSLEMAEGLVEAMLDGIESAPAADRPVG,"inference: ab initio prediction:AMIGene:2.0 ;Evidence 4 : Homologs of previously reported genes of unknown function ;inference: non-experimental evidence, no additional details recorded ;",,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,,,,,
NC_008027,Chromosome,PSEEN0029,YP_605840,104779342,Protein,30454,29477,qor,,"quinone oxidoreductase, NADPH-dependent",,Class 2,ATGGCCAAGCGTATCCAGTTCAGCCAGCATGGCGGCCCGGAAGTCCTGCAACTGGTGGAGTTCGACCCGGCACCGCCCGGCCCGCAGCAGGTGCGGGTGCGTAACCATGCGATCGGTTTGAACTTCATCGACACCTATTTCCGCAGCGGGCTGTATGCGCCGCCAGCTCTACCTTCCGGGCTGGGCACTGAAGCGGCCGGCGTGGTCGAGGCGGTGGGCGAGGGTGTCAGCCGGATCAAGGTCGGCGACCGCGTGGCGTACGCCGGTGGGCCGCTTGGGGCCTACAGCGAGGTGCATACGTTGCCAGAGGCCAATCTGGTGAAGCTGCCCGAAGCGATCAGCTTCGAACAGGCGGCGGCGGTGATGCTCAAGGGGCTGACCACGCAATACCTGCTCAAGCAGACCTATGCCGTGCAGCCGGGGGACTTCGTGCTGTTCCATGCCGCCGCTGGCGGTGTGGGCTCGCTGGCGTGCCAGTGGGCCAAGGCGCTGGGCGCGAAGCTGATCGGCACCGTGAGTTCTCCTGAGAAAGCCGAACGGGCCAAGGCGCTCGGGGCCTGGGCGACCATCGACTACAGCCAAGAAGACGTGGCCAAGCGTGTGCTGGAACTGACCGACGGTCAAAAGTGCTCGGTGGTGTATGACGGCGTGGGGGCGGATACCTGGCTGACCTCGCTGGATTGCCTGAGGCCGCGAGGGTTGATGGTGAGCTTCGGCAATGCCTCCGGCGCGGTGAGCGGGGTCAACTTGGGGATCCTGTCGCAAAAGGGGTCGTTGTATGTCACCCGGCCGACACTGGGGAGCTACGCCAACAATGCCGAGAACACCCAGGCCATGGCCGATGACCTGTTCGCGATGATCGCCAGTGGCAAGCTGGTTGTGGATATCCAGCAGCGGTATCCGTTGAGCGAGGCGGCCAAGGCGCAGGCGGAGTTGTCGGCGCGGCGGACGGTCGGCTCGACTGTTTTGCTGCCTTGA,MAKRIQFSQHGGPEVLQLVEFDPAPPGPQQVRVRNHAIGLNFIDTYFRSGLYAPPALPSGLGTEAAGVVEAVGEGVSRIKVGDRVAYAGGPLGAYSEVHTLPEANLVKLPEAISFEQAAAVMLKGLTTQYLLKQTYAVQPGDFVLFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAERAKALGAWATIDYSQEDVAKRVLELTDGQKCSVVYDGVGADTWLTSLDCLRPRGLMVSFGNASGAVSGVNLGILSQKGSLYVTRPTLGSYANNAENTQAMADDLFAMIASGKLVVDIQQRYPLSEAAKAQAELSARRTVGSTVLLP,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.4.3 : Electron carrier ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ;",,,,,,1.6.5.5 ;,,Unknown,Class 3,,TIGR01751,crot-CoA-red,crotonyl-CoA reductase,No data,2.60E-10,,No data,No data,PF00107PF08240,"ADH_zinc_N, Zinc-binding dehydrogenase..ADH_N, Alcohol dehydrogenase GroES-like domain. This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure..",COG0604,"Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only].",Energy production and conversion / General function prediction only
NC_008027,Chromosome,PSEEN0030,YP_605841,104779343,Protein,30587,31498,hemF,,coproporphyrinogen III oxidase,,Class 2,ATGACCAGCCGCACCGAGGCCGTAAAAGCCTACCTGCTCGACCTGCAAGACCGCATCTGCTCTGCCCTCGAAACCGAAGACGGCGGCGCCCGCTTCGTCGAGGATGCCTGGGTGCGCGATGCCGGTGGCGGCGGTCGCACGCGGGTGATCGGCGAGGGCAAGGTGATCGAGAAAGGCGGGGTGAACTTCTCCCACGTGTTCGGCGCCGGCCTGCCACCGTCGGCCAGTGCCCACCGCCCGGAGCTGGCGGGCCGTGGCTTCGAGGCCCTGGGCGTGTCGCTGGTGATCCACCCGCACAACCCGCACGTACCGACTTCCCACGCCAACGTGCGCTTCTTCATCGCCGAAAAAGAAGGCGAAGAGGCCGTGTGGTGGTTCGGCGGCGGCTTCGACCTGACCCCGTACTACGGCAACGAGGAAGATTGCGTCCACTGGCACCGCGTTGCCGAACAGGCCTGCGCGCCGTTCGGCGCCGATGTCTATCCACGCTACAAGGCCTGGTGCGACCGCTACTTCCACCTCAAGCACCGTGGCGAGCCGCGCGGCATTGGCGGCCTGTTCTTCGATGACCTGAACGAGTGGGACTTCGACACCTGCTTCGCCTTCATGCGCGCCATCGGCGACGCCTACGTCGACGCCTACCTGCCGATCATCCAGCGCCGCAAGGACACGCCGTATACCGCCAAGCAGCGTGAATTCCAGGAATACCGCCGTGGCCGCTACGTTGAGTTCAACCTGGTCTACGACCGTGGCACGCTGTTCGGTTTGCAGTCCGGTGGCCGCACCGAGTCGATCCTGATGTCGCTGCCGCCGCAGGTACGTTGGGGATACGATTGGAAAGCCGAGCCTGGCAGCGAGGAAGCGCGCCTGACCGACTATTTCCTGCAGGACCGCGACTGGCTCGCCCAGTAA,MTSRTEAVKAYLLDLQDRICSALETEDGGARFVEDAWVRDAGGGGRTRVIGEGKVIEKGGVNFSHVFGAGLPPSASAHRPELAGRGFEALGVSLVIHPHNPHVPTSHANVRFFIAEKEGEEAVWWFGGGFDLTPYYGNEEDCVHWHRVAEQACAPFGADVYPRYKAWCDRYFHLKHRGEPRGIGGLFFDDLNEWDFDTCFAFMRAIGDAYVDAYLPIIQRRKDTPYTAKQREFQEYRRGRYVEFNLVYDRGTLFGLQSGGRTESILMSLPPQVRWGYDWKAEPGSEEARLTDYFLQDRDWLAQ,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.5.3.12 : Heme, porphyrin ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ;",,,,,,1.3.3.3 ;,,Cytoplasmic,Class 3,,,,,,,,,,PF01218,"Coprogen_oxidas, Coproporphyrinogen III oxidase..",COG0408,"HemF, Coproporphyrinogen III oxidase [Coenzyme metabolism].",Coenzyme metabolism
NC_008027,Chromosome,PSEEN0031,YP_605842,104779344,Protein,31503,32348,aroE,,shikimate 5-dehydrogenase,,Class 2,GTGGATAACCGAGGAGCCCCCATGGACCAGTACGTCGTATTCGGCAACCCCATCGGCCACAGCAAGTCGCCGCTGATCCACCGCCTGTTCGCCGACCAGACCGGCCAGGACCTGGAGTACGCCACCCTGCTCGCGCCGCTGGACGAGTTCAGTGACTGCGCCACAGGCTTCTTCAAGCAAGGCAGCGGCGCCAACGTCACCGTACCGTTCAAGGAAGAGGCCTATCGCTTGTGTGACAGCCTTACCCCAAGGGCACAGCGTGCAGGCGCGGTGAATACCCTGACCAAGCTGGCCGACGGCACCCTGCAGGGTGACAACACCGACGGCGCGGGGCTGGTGCGGGACCTGACGGTAAACGCCGGGGTGACCTTGGCGGGCAAGCGCATCCTTATCCTTGGCGCCGGTGGCGCGGTACGCGGTGTGCTGGAGCCGATCCTGGCGCACAACCCGCAATCGCTGGTGATCGCCAACCGTACCGTTGAGAAAGCCGAGCAGCTGGCGCGGGAGTTCGATGAACTTGGGCCGGTGGTGGCCAGTGGTTTCAGCTGGTTGCAGGAGCCGGTGGACGTGATCATCAATGCCACCTCGGCGAGCCTGGCCGGCGAGTTGCCGCCGATTGCCGACAGCCTGGTCGAGGCGGGGCGCACGGTCTGCTACGACATGATGTATGGCAAGGAGCCGACGCCTTTCTGCCAGTGGGCGAGCAAGCTGGGGGCGGCCAAGGTGCTTGATGGGCTGGGGATGCTGGCCGAGCAGGCAGCCGAGGCGTTCTTTATCTGGCGGGGGGTGCGTCCGGACACGGCGCCTGTGCTGGATGAACTGCGTCGGCAATTGGCGCGCAGTTGA,MDNRGAPMDQYVVFGNPIGHSKSPLIHRLFADQTGQDLEYATLLAPLDEFSDCATGFFKQGSGANVTVPFKEEAYRLCDSLTPRAQRAGAVNTLTKLADGTLQGDNTDGAGLVRDLTVNAGVTLAGKRILILGAGGAVRGVLEPILAHNPQSLVIANRTVEKAEQLAREFDELGPVVASGFSWLQEPVDVIINATSASLAGELPPIADSLVEAGRTVCYDMMYGKEPTPFCQWASKLGAAKVLDGLGMLAEQAAEAFFIWRGVRPDTAPVLDELRRQLARS,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.5.1.20 : Chorismate ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ;",,,,,,1.1.1.25 ;,,Cytoplasmic,Class 3,GO:0009423 ;,TIGR00507,aroE,shikimate 5-dehydrogenase,equivalog_domain,5.70E-102,1.1.1.25,Amino acid biosynthesis,Aromatic amino acid family,PF08501PF01488,"Shikimate_dh_N, Shikimate dehydrogenase substrate binding domain. This domain is the substrate binding domain of shikimate dehydrogenase..Shikimate_DH, Shikimate / quinate 5-dehydrogenase. This family contains both shikimate and quinate dehydrogenases. Shikimate 5-dehydrogenase catalyses the conversion of shikimate to 5-dehydroshikimate. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites 3-dehydroquinate and dehydroshikimate..",COG0169,"AroE, Shikimate 5-dehydrogenase [Amino acid transport and metabolism].",Amino acid transport and metabolism
NC_008027,Chromosome,PSEEN0032,YP_605843,104779345,Protein,34232,32667,,,sulfate transporter,,Class 3,ATGCCCCGTCCACACCACCTGCTGCCCTTCCTCGCCTGGCTCCCCCGCCAATCGGGTCGCAGCCTGCGCCAGGACCTGCTGGTAGGCCTGAGCGGCGCCATCCTCGCCCTGCCGCAATCGATCGCCTACGCCCTGATCGCCGGCCTGCCCGCCGAATACGGCCTGTACGCCGCCATCGTGCCGGTGCTGGTCGCCTGCCTGTGGGGCTCGTCCTGGCACCTGATCTGCGGCCCCACCGCCGCCATTTCCATCGTCCTCTATGCCAGCATCAGCCCACTGGCCGTGGCCGGCAGCGCCGACTACGTGACCCTGGTGCTGCTGCTGACCTTCCTCGGCGGCGTCTTCCAGCTCATGCTGGGGCTGCTGCGCTTCGGCGCGCTGGTCAACTTCGTCTCCCATTCGGTGGTGCTGGGCTTCACCCTCGGTGCTGCCATCGTCATCGCGCTGGGGCAACTGCCCAATCTGCTGGGCCTGGACCTGCCAAGCCAGGCCACGGCTCTGAAGACCGTGCAGGAACTGACCGGCCATGTTGGTGAGGTGGACATGCCATCGCTGATTCTGGGACTGAGCACCCTGGTGATTGGCGTGGTGTTGAAGCTATGGCGCCCGCGCTGGCCGAGCCTGTTGATAAGTTTGCTGCTGGTCAGCCTGGCGGCCTGGCTGTTGCCCGGCGTGTTCGGCCATGTACCACGCGTGCCCGCTTTCGTCGGCCAGTTGCCACCGCTCAGCCCGCTGCCGTTACTCGATGTGGAACTTATCCTGCGCCTGCTGCCCAGTGCCGTGGCTGTCGGCATGCTCGGGCTGGTCACCAGCCTGTCCATCGCCCGTTCCCTGTCCGCCCGTTCCGAGCAACTGATCGACGCCAACCAGGAGATCCGCGCCCAGGGCCTGTCGAACATCGTCGGGGCATTGTTCTCCGGCTATCTGTCCTCCGGCTCCTTTACCCGCTCCGGGCTCAGCTACGACGCAGGCGCCCGCTCGCCATTGGCCGGAGTGTTCTCGGCGCTGTGGGTGACGCTGTTCGCGGTCGCTGGTGCCGGGCTGATCGCTCATCTGCCGATCCCGGCGATGGCGGGCAGCATCCTACTGATCTGCTGGGGGCTGGTGGACCATCGCGGCATCCGCGCGCTGTTCCGGGTCAGCCGTTCGGAGTTCCTGGTAATGGCGCTGACCGCCGCCGCGACGCTGCTGCTGGAGCTGCAAACGGCGATCTACGCCGGGGTGCTGGCATCGCTGTTCTTCTACCTCAAGCGCACTTCGCGGCCACGGGTGCAGCAGAGCCGGGAAGGGGAGGCGGATGTGTTGCGGGTGGGCGGGTCGATCTTCTTCGGCGCGGCGCATTACCTGCAGGTGCGCTTGCAGCGCTGCCAGGGGCCGCATGTGGTGATCGATGCGCGGCAGGTGAACTTCATCGATTACTCGGGTGTGGATATGTTGCACCGCGAGGCGCGGCGGTTGCTGCGCAATGGCGGGAGCCTGACATTGCGGCGAGCGCGGCCGCAGGTGATAGAGGAACTGCAGAAGCTGGAAGGCCTGGCGAGCTGCCCAATACGCTTCGAGGGCTGA,MPRPHHLLPFLAWLPRQSGRSLRQDLLVGLSGAILALPQSIAYALIAGLPAEYGLYAAIVPVLVACLWGSSWHLICGPTAAISIVLYASISPLAVAGSADYVTLVLLLTFLGGVFQLMLGLLRFGALVNFVSHSVVLGFTLGAAIVIALGQLPNLLGLDLPSQATALKTVQELTGHVGEVDMPSLILGLSTLVIGVVLKLWRPRWPSLLISLLLVSLAAWLLPGVFGHVPRVPAFVGQLPPLSPLPLLDVELILRLLPSAVAVGMLGLVTSLSIARSLSARSEQLIDANQEIRAQGLSNIVGALFSGYLSSGSFTRSGLSYDAGARSPLAGVFSALWVTLFAVAGAGLIAHLPIPAMAGSILLICWGLVDHRGIRALFRVSRSEFLVMALTAAATLLLELQTAIYAGVLASLFFYLKRTSRPRVQQSREGEADVLRVGGSIFFGAAHYLQVRLQRCQGPHVVIDARQVNFIDYSGVDMLHREARRLLRNGGSLTLRRARPQVIEELQKLEGLASCPIRFEG,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 4.2.A.53 : The Sulfate Permease (SulP) Family ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ;",,,,,,,,Cytoplasmic Membrane,Class 3,GO:0016020 ;,TIGR00815,sulP,sulfate permease,subfamily,8.50E-98,,Transport and binding proteins,Anions,PF00916PF01740,"Sulfate_transp, Sulfate transporter family. Mutations in human diastrophic dysplasia protein lead to several diseases..STAS, STAS domain. The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C terminal region of Sulphate transporters and bacterial antisigma factor antagonists. It has been suggested that this domain may have a general NTP binding function..",COG0659,"SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].",Inorganic ion transport and metabolism
NC_008027,Chromosome,PSEEN0033,YP_605844,104779346,Protein,35306,34383,,,glycine betaine-binding protein,,Class 3,ATGCAGAAGTTCTCCACCGCCGTGCTCGCCCTGGCCCTGAGCCTGGGCACGGCCCACGCCGCCGACGGCAACGTGCAATGCAGCACCGTGAAACTGGCCGACCCTGGCTGGAGCGATATCGCCAGTACCAACGCCGTCGCTCGCCTGCTCCTGGAAAACCTGGGCTACCAGGTGAAGATCGACAGCCTGGCCGTGCCGATAATCTACGGCGGCCTGAAGGACGGCCGGGTGGACGCCTTTCTCGGCAACTGGATGCCGGCGCAGCAGGGCTTTCATGACAAATTCATCGCCAATGGCGACGTGCAGCAGCTGGCGCGCAACCTGGAGGGCACCGAGTTCACCCTGGCGGTGCCCGATTATGTGTGGGAAGCCGGCGTGAAGGACTTCGCCGACCTGCACAAGTACGCTGACAAGTTCGACAAGAAGCTCTACGGCATCGGCTCCGGCGCGCCGGCCAACCTGTCGCTGAAGGAGATCATCGACAAGAACGACTTCGCGCTTGGGCAGTGGAAGCTGGTCGAATCCAGCGAGCAGGCGATGCTGGCCCAGGTGGACCGGGCGGTGAAAAAGCAGCAGTTCATCACCTTCCTGGGCTGGACCCCGCATCCGATGAACGTGAAGTTGAAGATGCATTACCTCACGGGTGGCGAACAATGGTTTGGCAGCAAAGGCGATGTGTACACGCTGACCCGCAAGGGCTATCCACAGGCTTGCCCGAATGCAGCGAAGTTGCTGAGCAACCTGACGTTCACGCTGGAGATGGAGAACAGCATCATGGCCGAGGTTGTGGATAAGAAGGTGAGCTTTGATGAAGCGGCCAGGAGGTGGGTGAAGGCTCATCCGGAATTGCTGGACGGTTGGCTGGCCGGAGTGACCTCCAAGGACGGTGGAGATGCATCAGAAGTGCTCAAGGCCAAGCTCTGA,MQKFSTAVLALALSLGTAHAADGNVQCSTVKLADPGWSDIASTNAVARLLLENLGYQVKIDSLAVPIIYGGLKDGRVDAFLGNWMPAQQGFHDKFIANGDVQQLARNLEGTEFTLAVPDYVWEAGVKDFADLHKYADKFDKKLYGIGSGAPANLSLKEIIDKNDFALGQWKLVESSEQAMLAQVDRAVKKQQFITFLGWTPHPMNVKLKMHYLTGGEQWFGSKGDVYTLTRKGYPQACPNAAKLLSNLTFTLEMENSIMAEVVDKKVSFDEAARRWVKAHPELLDGWLAGVTSKDGGDASEVLKAKL,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 4.3.A.1.p : periplasmic binding component ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ;",,,,,,,,Unknown,Class 3,,,,,,,,,,PF04069,"OpuAC, Substrate binding domain of ABC-type glycine betaine transport system. Part of a high affinity multicomponent binding-protein-dependent transport system involved in bacterial osmoregulation. This domain is often fused to the permease component of the transporter complex. Family members are often integral membrane proteins or predicted to be attached to the membrane by a lipid anchor. Glycine betaine is involved in protection from high osmolarity environments for example in Bacillus subtilis. The family member OpuBC is closely related, and involved in choline transport. Choline is necessary for the biosynthesis of glycine betaine. L-carnitine is important for osmoregulation in Listeria monocytogenes. Family also contains proteins binding l-proline (ProX), histidine (HisX) and taurine (TauA)..",COG2113,"ProX, ABC-type proline/glycine betaine transport systems, periplasmic components [Amino acid transport and metabolism].",Amino acid transport and metabolism
NC_008027,Chromosome,PSEEN0034,YP_605845,104779347,Protein,36838,35321,betC,,choline sulfatase,,Class 2,ATGAAACAACCCAACATCCTGTTCATCATGGCCGACCAGATGGCCGCGCCGCTGCTGCCGATCTACACCCCATCGCCGATCAAGATGCCCAACCTGGCGCGCCTCGCCGAGCAGGCCGTGGTGTTCGACTCCGCCTACTGCAACAGCCCGCTGTGCGCGCCCTCGCGCTTCACCCTGGTCAGCGGCCAGTTGCCCAGCCGCATCGGCGCCTACGACAACGCCGCCGACTTTCCTGCCGACATTCCGACTTACGCCCACTACCTGCGCCGCCTCGGCTACCGCACCGCGCTCTCGGGCAAGATGCACTTCTGCGGCCCGGACCAGCTGCACGGCTACGAGGAGCGCCTGACCAGCGACATCTACCCGGCCGACTACGGCTGGGCGGTGAACTGGGACGCGCCAGACCAACGCCCGAGCTGGTACCACAACATGTCCTCGGTGCTGCAGGCCGGGCCGTGCGTACGCACCAACCAGCTGGATTTCGATGAGGAAGTGGTGTTCAAGGCACGCCAGTATCTCTACGACCATGTGCGCGAAGACCATGGCCGGCCTTTCTGCCTGACCGTGTCGATGACCCACCCCCACGACCCGTACACCATCCCCAAACGCTACTGGGATCTCTACGAGGCTGTGGATATCCCGCTGCCCCGCGACGTGATCGCCCAAAGCCAGCAAGACCCGCATTCGCAACGCCTGCTCAAGGTCTACGACCTGTGGGACAAGCCGCTGCCCGTGGACAAGATCCGCGATGCCCGCCGCGCCTACTTCGGCGCCTGCAGCTACATCGACGACAATATCGGCCTGCTTGTGCAGACGCTGGAAGACTGCGGCCTGGCCGACGACACCCTGATCGTCTTCTCCGGCGACCACGGCGACATGCTTGGCGAGCGAGGGCTCTGGTACAAGATGCACTGGTTCGAGATGTCGGCGCGGGTGCCGCTGCTGATCCACGCGCCCAAGCGCTTCGCACCCGCGCGGATCAGCGCCAGCGTATCCACCTGCGACCTGCTGCCGACCCTGGTCGAACTGGCCGGCGGCGCTGTGGATAAAGACCTGCACCTGGACGGCCGCTCACTGCTCGGGCACCTGCAAGGGCAGGGCGGGCATGACGAGGTGATCGGCGAATACATGGCCGAGGGTACCGTCGGCCCGCTGATGATGATCCGCCGCGGCGCCTACAAGTTCGTGTACAGCGAAGACGACCCCTGTTTACTCTACGACCTGAGCCGCGACCCGCACGAGCGGGAGAACCTCACCGGCAGCCCGGACCACCAGGTGCTGCTGCAGGCATTTGTCGATGAAGCGAAGCAACGCTGGGATATCCCCAGCCTGCGCCAGCAGGTGCTGGCCAGCCAGCGCCGCCGCCGCCTGGTGGCCGAGGCGCTGGCCATCGGCACGCTGAAAAGCTGGGACCACCAACCCTTGGTGGACGCCAGCCAACAGTACATGCGCAACCACATCGATCTCGACGACCTCGAGCGCAAGGCACGTTATCCACAGCCCGCACCCCTGGATTGA,MKQPNILFIMADQMAAPLLPIYTPSPIKMPNLARLAEQAVVFDSAYCNSPLCAPSRFTLVSGQLPSRIGAYDNAADFPADIPTYAHYLRRLGYRTALSGKMHFCGPDQLHGYEERLTSDIYPADYGWAVNWDAPDQRPSWYHNMSSVLQAGPCVRTNQLDFDEEVVFKARQYLYDHVREDHGRPFCLTVSMTHPHDPYTIPKRYWDLYEAVDIPLPRDVIAQSQQDPHSQRLLKVYDLWDKPLPVDKIRDARRAYFGACSYIDDNIGLLVQTLEDCGLADDTLIVFSGDHGDMLGERGLWYKMHWFEMSARVPLLIHAPKRFAPARISASVSTCDLLPTLVELAGGAVDKDLHLDGRSLLGHLQGQGGHDEVIGEYMAEGTVGPLMMIRRGAYKFVYSEDDPCLLYDLSRDPHERENLTGSPDHQVLLQAFVDEAKQRWDIPSLRQQVLASQRRRRLVAEALAIGTLKSWDHQPLVDASQQYMRNHIDLDDLERKARYPQPAPLD,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.8.2 : Sulfur metabolism ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ;",,,,,,3.1.6.6 ;,,Cytoplasmic,Class 3,,,,,,,,,,PF00884,"Sulfatase, Sulfatase..",COG3119,"AslA, Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism].",Inorganic ion transport and metabolism
NC_008027,Chromosome,PSEEN0035,YP_605846,104779348,Protein,36948,37844,,,"transcriptional regulator, LysR family",,Class 3,ATGTTTGAGCACCTTGCCGACCTGTCCCTCGATGCCTTGCGCGTGTTCGAGGCCGCCGCACGTCTGCGCGGCTTTACCGCTGCCGCCGTGGAGCTGGGCACCACGCAGCCGGCGGTGAGCCAGCAGGTAAAGCGCCTGGAGGCGCAGTTGGGAACGCGGTTGTTCGACCGTATCTACCGGGGCATCGAGCTGACCGAAGCGGGCCAGCTGCTGTTCGAACAGGTACATCAGGGGTTGCAGGCCATGGATGATGGTGTTGCCCAGGCCAGTGGTCGTGGGCAGCGCGAGGTGTTGCAGGTGGCCACCGACTTCGCCTTTGCCGCGTTCTGGCTAATGCCGCGCTTGCAGCGTTTTCACGAGGCCAATCCACAGGTGGACGTGAGCCTGGTGACCGGCGAGCGCAGCCAGGGGATGTTGCGCCCGGACATCGATGTGGCGGTGCTGTTTGGCGATGGGCGTTTCCATCAGGGCGAGAGCCGCTGGTTGTTTGACGAGGAGGTCTTCCCGGTCTGCAGCCCACGGCTGATTCATGGCAAACCCTTGTCAGCCGTGGCTTTGCAACGATTGCCGTTGCTGCATCTGAAGGGTGAGCAGGCCAGTCGCTGGTTCGATTGGGCGGGGGTGTTTCGGGGGCTTGGCGTGGACAGCCCTCCTCCGTCCGGGCAACTGCGGTTCGATAACTACACGCTGCTGATTCAGGCGGCGATTGCCGGGCAAGGCGTGGCGATTGGCTGGGCACACCTGGTCGATGGGCTGGTCGAGCAAGGGTTGTTGTGTCGGCCTATGGAAGGCAGTTTGCGGTCGGCGCGGGGGTACTACGTGGTGCTGCCGCAGCGCAAACGGCGTGGGGCGCTGATCCATCGGTTCGTGGATTGGCTGGAGCATGAGCGCCTGTAG,MFEHLADLSLDALRVFEAAARLRGFTAAAVELGTTQPAVSQQVKRLEAQLGTRLFDRIYRGIELTEAGQLLFEQVHQGLQAMDDGVAQASGRGQREVLQVATDFAFAAFWLMPRLQRFHEANPQVDVSLVTGERSQGMLRPDIDVAVLFGDGRFHQGESRWLFDEEVFPVCSPRLIHGKPLSAVALQRLPLLHLKGEQASRWFDWAGVFRGLGVDSPPPSGQLRFDNYTLLIQAAIAGQGVAIGWAHLVDGLVEQGLLCRPMEGSLRSARGYYVVLPQRKRRGALIHRFVDWLEHERL,"inference: non-experimental evidence, no additional details recorded ;inference: ab initio prediction:AMIGene:2.0 ;function prediction: 3.1.2 : Transcriptional level ;function prediction: 2.2.2 : Transcription related ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ;",,,,,,,,Cytoplasmic,Class 3,,TIGR02036,dsdC,D-serine deaminase transcriptional activator,equivalog,1.40E-16,,Regulatory functions,DNA interactions,PF03466PF00126,"LysR_substrate, LysR substrate binding domain. The structure of this domain is known and is similar to the periplasmic binding proteins..HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family..",COG0583,"LysR, Transcriptional regulator [Transcription].",Transcription
NC_008027,Chromosome,PSEEN0036,YP_605847,104779349,Protein,37975,38307,,,hypothetical protein,,Class 4,GTGCAAAGGATCAAGGGCTATCACGCCCACGTGTACTACGACGCATCGACCATGGAACAGGCCCGTGAGCTGTGCGAGGAGGCGACGCGGCTGTTCCCCGTGACCATGGGGCGCATGCACCAGAAGCCGGTCGGGCCGCACCCGGACTGGAGCTGTCAGCTGGCCTTCGGGCCGGAGGTGGTGGGTGTGGTGTTGCCGTGGCTGGCGCTGTATCGCAAGGGGCTGGTGGTGTTCCTGCACCCGGAAACCGGGGATGAGCTGGCGGATCACCGCGATCATGCGATCTGGATGGGAGCGATCAGGCCGTTGGATCTTTCGATCTTCGAAGGTTAG,MQRIKGYHAHVYYDASTMEQARELCEEATRLFPVTMGRMHQKPVGPHPDWSCQLAFGPEVVGVVLPWLALYRKGLVVFLHPETGDELADHRDHAIWMGAIRPLDLSIFEG,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 4 : Homologs of previously reported genes of unknown function ;",,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,PF08883,"DOPA_dioxygen, Dopa 4,5-dioxygenase family. This family of proteins are related to a DOPA 4,5-dioxygenase that is involved in synthesis of betalain. DOPA-dioxygenase is the key enzyme involved in betalain biosynthesis. It converts 3,4-dihydroxyphenylalanine to betalamic acid, a yellow chromophore..",COG3805,"DodA, Aromatic ring-cleaving dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism].","Secondary metabolites biosynthesis, transport, and catabolism"
NC_008027,Chromosome,PSEEN0037,YP_605848,104779350,Protein,39217,38408,trpA,,tryptophan synthase alpha subunit,,Class 2,ATGAGCCGTCTCGAACAACGCTTCGCCGAATTGAAGGCCGAAGGCCGCTCCGCCCTGGTCACCTTCGTCACCGCCGGCGACCCGGGCTACGACGCCTCGCTGGAGATCCTCAAGGGCCTGCCGGCCGCTGGCGCCGATGTGATCGAACTGGGCATGCCGTTCACCGACCCGATGGCCGACGGCGTCGCTATCCAGCTCGCCACCCTGCGTGCCCTGGAAGCCGGTCAGACACTGGCCAAGACCCTGCAGATGGTTCGCGAATTCCGTGTCGGCAACCAGACCACGCCCATCGTGCTGATGGGTTACTACAACCCGATCCACCGTTTCGGCGTTGAGCAGTTCGTCGCCGAGGCGAAAGAGGCGGGCGTAGACGGCCTGATCATCGTCGACCTGCCTCCGGAGCACGACGCCGAACTGGCCACCCCAGCCCAGGCCGCAGGCATCGACTTCATCCGCCTGACCACCCCGACTACCGACGATGCGCGCCTGCCGCGCGTGCTGGAGCGCAGCTCCGGGTTCGTCTACTACGTGTCGGTGGCCGGGGTGACCGGTGCGGGCTCGGCGACCACCGAACATGTGACCGAAGCCATTGCGCGCCTGCGCCGGCATACCGACCTGCCGATCAGCGTCGGTTTCGGCATCCGCACACCGGAGCAGGCTGCTGCCATTGCCCGCCTGGCTGATGGCGTGGTGGTCGGTTCGGCGCTGGTCGACAAGATCGCCCAGGCCAAGGATGCCGGCCAGGCGGTGAAGGATGTGTTGAGCCTGTGCTCGGCGCTGGCCGACGGCGTACGCGCCGCTCGCGTCTGA,MSRLEQRFAELKAEGRSALVTFVTAGDPGYDASLEILKGLPAAGADVIELGMPFTDPMADGVAIQLATLRALEAGQTLAKTLQMVREFRVGNQTTPIVLMGYYNPIHRFGVEQFVAEAKEAGVDGLIIVDLPPEHDAELATPAQAAGIDFIRLTTPTTDDARLPRVLERSSGFVYYVSVAGVTGAGSATTEHVTEAIARLRRHTDLPISVGFGIRTPEQAAAIARLADGVVVGSALVDKIAQAKDAGQAVKDVLSLCSALADGVRAARV,"inference: non-experimental evidence, no additional details recorded ;inference: ab initio prediction:AMIGene:2.0 ;function prediction: 1.5.1.15 : Tryptophan ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ;",,,,,,4.2.1.20 ;,,Cytoplasmic,Class 3,GO:0004834 ;,TIGR00262,trpA,"tryptophan synthase, alpha subunit",equivalog,5.40E-80,4.2.1.20,Amino acid biosynthesis,Aromatic amino acid family,PF00290PF01884,"Trp_syntA, Tryptophan synthase alpha chain..PcrB, PcrB family. This family contains proteins that are related to PcrB. The function of these proteins is unknown..",COG0159,"TrpA, Tryptophan synthase alpha chain [Amino acid transport and metabolism].",Amino acid transport and metabolism
NC_008027,Chromosome,PSEEN0038,YP_605849,104779351,Protein,40431,39214,trpB,,tryptophan synthase beta subunit,,Class 2,ATGACCCAGACCCAATACCGCGCCGGCCCCGATGCCAACGGCCTGTTCGGCTCGTTCGGCGGCCGCTACGTGGCCGAAACCCTGATGCCCCTGGTGCTGGACCTGGCCCGCGAATACGAAGCCGCCAAGGCCGACCCCAAGTTCCTCGAAGAACTCGCCTACTTCCAGCGCGACTACATCGGCCGCCCCAACCCGCTGTACTTCGCCGAGCGCCTGACCGAGCACTGCGGCGGCGCGAAGATCTTCTTCAAGCGTGAAGAGCTCAACCACACCGGCGCGCACAAGGTGAACAACTGCATCGGCCAGGTGCTGCTGGCCAAGCGCATGGGCAAGAAACGCCTGATCGCCGAGACCGGCGCCGGCATGCACGGTGTGGCCACCGCCACCGTCGCCGCGCGCTTCGGCCTGCCTTGCGTGATCTACATGGGTGCCACCGACATTGAGCGCCAGCAGGCCAACGTGTTCCGCATGAAGCTGCTGGGCGCCGAGATCGTCCCGGTCACCGCCGGCACCGGCACCCTCAAGGACGCCATGAACGAGGCCCTGCGCGACTGGGTCACCAACGTCGAGGACACCTTCTACCTGATCGGCACCGTGGCCGGCCCGCACCCGTACCCGGCGATGGTCCGCGACTTCCAGTCGATCATCGGCAAGGAAACCCGCGCCCAGCTGCAGGAGAAGGAAGGGCGCCTGCCCGACAGCCTGATCGCCTGCGTCGGCGGCGGCTCCAATGCCATGGGCCTGTTCCACGACTTCCTCGATGATGCCAGTGTGCAGATCATCGGCGTCGAAGCCGGCGGTCACGGCGTGCACACCGACAAGCACGCGGCCAGCCTCAACGGCGGCGTGCCGGGCGTACTGCACGGCAACCGCACCTACCTGCTGCAGGACGACGACGGCCAGATCACCGACGCCCACTCGATCTCGGCAGGCCTGGACTACCCTGGCATCGGCCCGGAGCACGCCTACCTGCATGAAGTGAAGCGTGTGGAGTACGTCAGCATCACCGACGACGAAGCACTCGACGCCTTCCACGCCACCTGCCGCCTGGAAGGCATCATCCCGGCGCTGGAAAGCTCCCACGCCCTGGCCGAGGCGATCAAGCGCGCGCCGAAGCTGCCCAAGGACCACCTGATGGTGATCTGCCTGTCCGGTCGCGGCGACAAGGACATGCAAACCGTGATGAACCACATGGCCGCCCAGGAGAAACAGGCATGA,MTQTQYRAGPDANGLFGSFGGRYVAETLMPLVLDLAREYEAAKADPKFLEELAYFQRDYIGRPNPLYFAERLTEHCGGAKIFFKREELNHTGAHKVNNCIGQVLLAKRMGKKRLIAETGAGMHGVATATVAARFGLPCVIYMGATDIERQQANVFRMKLLGAEIVPVTAGTGTLKDAMNEALRDWVTNVEDTFYLIGTVAGPHPYPAMVRDFQSIIGKETRAQLQEKEGRLPDSLIACVGGGSNAMGLFHDFLDDASVQIIGVEAGGHGVHTDKHAASLNGGVPGVLHGNRTYLLQDDDGQITDAHSISAGLDYPGIGPEHAYLHEVKRVEYVSITDDEALDAFHATCRLEGIIPALESSHALAEAIKRAPKLPKDHLMVICLSGRGDKDMQTVMNHMAAQEKQA,"inference: non-experimental evidence, no additional details recorded ;inference: ab initio prediction:AMIGene:2.0 ;function prediction: 1.5.1.15 : Tryptophan ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ;",,,,,,4.2.1.20 ;,,Cytoplasmic,Class 3,GO:0004834 ;,TIGR00263,trpB,"tryptophan synthase, beta subunit",equivalog,3.90E-287,4.2.1.20,Amino acid biosynthesis,Aromatic amino acid family,PF00291,"PALP, Pyridoxal-phosphate dependent enzyme. Members of this family are all pyridoxal-phosphate dependent enzymes. This family includes: serine dehydratase EC:4.2.1.13 P20132, threonine dehydratase EC:4.2.1.16, tryptophan synthase beta chain EC:4.2.1.20, threonine synthase EC:4.2.99.2, cysteine synthase EC:4.2.99.8 P11096, cystathionine beta-synthase EC:4.2.1.22, 1-aminocyclopropane-1-carboxylate deaminase EC:4.1.99.4..",COG0133,"TrpB, Tryptophan synthase beta chain [Amino acid transport and metabolism].",Amino acid transport and metabolism
NC_008027,Chromosome,PSEEN0039,YP_605850,104779352,Protein,40543,41439,trpI,,transcriptional regulator TrpI,,Class 2,ATGGCCCAGGACCTTCCTCCTCTCAACGCCCTGCGGGCCTTCGAGGCAACCGCCCGGCTCAATAGCGTCAGCCAGGCGGCCGAAGCGCTTCATGTTACCCACGGTGCCGTCAGCCGGCAGATCAAGGTGCTCGAGGAGCATCTGGGCGTGGCGCTGTTCGTCAAGGATGGTCGTGGCGTCAAACTCACAGATGCCGGCATGCGCCTACGCGATGTGAGTGCCGAGGCCTTCGACCGGTTGCGAAGTGTCTGCGCCGAGCTTTCCCGCGATGCCGACGAAGCACCCTTCGTGCTCGGCTGCTCCGGCAGCTTGCTGGCCCGCTGGTTCATCCCGCGCCTGGGGCGCTTGAAAGCCGACCTGCCGGAATTGCGCCTGCACTTGTCAGCGGGCGAAGGTGATCTAGATCCTCGCCGCCCGGGGTTGGACGCCCTGCTGGTGTACGCCGAGCCGCCTTGGCCGGCGGACATGCAGGTGCACGTGCTTGCTGAAGAGCGGATCGGCCCGGTGATGAGTCCGCACTTTGAAGGCTTCGATCGGTTGAAGGCCGCGCCAGCCGTGGCTTTGCAACGAGAAGCAGTACTTCACACGACCTCTCGGCCCCAGGCTTGGCCGACCTGGGCACAGCAACATGGCATCGAGCCTGGCGCGCTGAGTTACGGCCAGGCATTCGAGCATCTGTACTACCTGTTGGAGGCTGCGGTGGCTGGGCTTGGCGTGGCCATTGCGCCACAACCGCTGGTTGCGGACGACCTGAAAGCCGGACGGCTGGCCGCACCGTGGGGATTTTCCCCCACCCGTGCGGCGTTGGCCTTGTGGGTACCCCGGCGCGCCGCCGACGGGCGCGCCGAGCAGCTGGCGCAGTGGCTGCGCCGCGAGTTGCAGCAGCAGGCGGGCTAG,MAQDLPPLNALRAFEATARLNSVSQAAEALHVTHGAVSRQIKVLEEHLGVALFVKDGRGVKLTDAGMRLRDVSAEAFDRLRSVCAELSRDADEAPFVLGCSGSLLARWFIPRLGRLKADLPELRLHLSAGEGDLDPRRPGLDALLVYAEPPWPADMQVHVLAEERIGPVMSPHFEGFDRLKAAPAVALQREAVLHTTSRPQAWPTWAQQHGIEPGALSYGQAFEHLYYLLEAAVAGLGVAIAPQPLVADDLKAGRLAAPWGFSPTRAALALWVPRRAADGRAEQLAQWLRRELQQQAG,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 3.1.2.2 : Activator ;function prediction: 2.2.2 : Transcription related ;function prediction: 1.5.1.15 : Tryptophan ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ;",,,,,,,,Cytoplasmic,Class 3,,TIGR02036,dsdC,D-serine deaminase transcriptional activator,equivalog,1.30E-11,,Regulatory functions,DNA interactions,PF00126PF03466,"HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family..LysR_substrate, LysR substrate binding domain. The structure of this domain is known and is similar to the periplasmic binding proteins..",COG0583,"LysR, Transcriptional regulator [Transcription].",Transcription
NC_008027,Chromosome,PSEEN0040,YP_605851,104779353,Protein,41759,41436,,,hypothetical protein,,Class 4,ATGGCCCACAACTCGCTGCGCAACGCCTCGCTGGAAAGCATGGAAGCGGAGATCGAGAGCCTGCTCAAGACGCTGGAGCACCTCAAGCACGATGCCTCGGAAGAGTCCCACAAGACCATGAAGGCGCTGCGCGGCAATGCCGAGAACGCCCTCAAGCACTCGCGCAGCCTGCTCAGCGATGCCTATTCGGAGGTGAAGACCCGCACCCGTCAGACAGGTGTCGCCACCCGCGACTATGCCCAGCAGCACCCCTGGACCACTGCCGGCGTGGCCATCGGCGCCCTGGGCCTGCTGGCCGCCTACCTGATGTGCCGCCGCGACTAG,MAHNSLRNASLESMEAEIESLLKTLEHLKHDASEESHKTMKALRGNAENALKHSRSLLSDAYSEVKTRTRQTGVATRDYAQQHPWTTAGVAIGALGLLAAYLMCRRD,"inference: ab initio prediction:AMIGene:2.0 ;Evidence 4 : Homologs of previously reported genes of unknown function ;inference: non-experimental evidence, no additional details recorded ;",,,,,,,,Unknown,Class 3,,,,,,,,,,PF05957,"DUF883, Bacterial protein of unknown function (DUF883). This family consists of several hypothetical bacterial proteins of unknown function..",COG4575,"ElaB, Uncharacterized conserved protein [Function unknown].",Function unknown
NC_008027,Chromosome,PSEEN0041,YP_605852,104779354,Protein,41877,42092,,,hypothetical protein,,Class 4,ATGTCCGATCATCACACCTACAAGAAGATCGAGCTGGTCGGGTCCTCGCCCACCAGCATCGAAGAGGCGATCAACAATGCCCTGGCCGAGGCCGGCAAGAGCATCAAGCACCTGGAGTGGTTCGAGGTGGTTGATACTCGCGGGCATATCCGCGACAACAAGGCCGCGCACTTCCAGGTGACGCTTAAGGTTGGGTTCCGCATCGCCAACAGCTGA,MSDHHTYKKIELVGSSPTSIEEAINNALAEAGKSIKHLEWFEVVDTRGHIRDNKAAHFQVTLKVGFRIANS,"inference: non-experimental evidence, no additional details recorded ;inference: ab initio prediction:AMIGene:2.0 ;Evidence 4 : Homologs of previously reported genes of unknown function ;",,,,,,,,Unknown,Class 3,,,,,,,,,,PF07311,"DUF1458, Protein of unknown function (DUF1458). This family consists of several hypothetical bacterial proteins as well as one archaeal sequence. Members of this family are typically of around 70 residues in length. The function of this family is unknown..",COG3360,"COG3360, Uncharacterized conserved protein [Function unknown].",Function unknown
NC_008027,Chromosome,PSEEN0042,YP_605853,104779355,Protein,42186,42407,,,hypothetical protein,,Class 4,ATGAAGAAGTTGATGCTGGCTGTAGGGCTGATGGTGTTGGCCGGTGGCGCGATGGCGGCGGGCAAGCCGTGCGAGGAGCTCAAGGCGGAGATTGCAGCGAAGCTGGATGCCAAGGGTGTGAAGGGTTACACGCTGGAGATCGTCAAGAAGGGCGACCCGGCGGGCAAGGTGGTGGGGACCTGTGAGGGCGGGGCCAAGGAGATTGTCTACCGGCGTGGTTGA,MKKLMLAVGLMVLAGGAMAAGKPCEELKAEIAAKLDAKGVKGYTLEIVKKGDPAGKVVGTCEGGAKEIVYRRG,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 4 : Homologs of previously reported genes of unknown function ;",,,,,,,,Unknown,Class 3,,,,,,,,,,PF06649,"DUF1161, Protein of unknown function (DUF1161). This family consists of several short, hypothetical bacterial proteins of unknown function..",,,
NC_008027,Chromosome,PSEEN0043,YP_605854,104779356,Protein,43524,42529,,,luciferase-like monooxygenase,,Class 3,ATGACGCACCTGCGTGACCTGAAGATTTCCACCCTCGACCTCGTGCCCGTGCGCGCCGACGGCGGCCCGGCGCAGTCGCTGCGCAACTCGCTGGACCTGGCACAGCATGTCGAGCGTTTCGGTTACAACCGTTTCTGGGTGGCCGAACACCACAACATGGATGGCATCGCCAGCTCCGCCACCGCCGTGCTGATGGGCTACCTGGCGGGCGGCACCTCGACGATTCGCATCGGCTCCGGCGGCGTGATGCTGCCCAACCACGCACCGCTGGTGATCGCCGAACAGTTCGGCACCCTGGCCAGCCTGTACCCTGGCCGCATCGACCTGGGCCTGGGCCGTGCCCCCGGCTCCGACCAGATGACCGCCCGCGCCCTGCGCCGCGAGCGTTCTGGCAGTGCCGACGACTTCCCGGACGATGTCGAGGAGCTGTCGCGCTACCTGGGCCCGCGCACCGACGACCAGAAGGTCATCGCCGTGCCCGGCCACGACACCGAAGTGCCGATGTGGCTGCTCGGCTCCAGCCTGTTCAGCGCCCAGCTGGCCGGCATGCGCGGCATGCCCTATGCCTTCGCCTCGCACTTCGCGCCGCGCTACATGCACGAGGCGATCCGCATCTACCGCGACCACTTCAAGCCCTCGACGACGCTGGACAAGCCCTACGTGATGCTGGGCATCCCGATGGTGGTGGCCGAGACCGACGAGAAAGCCGAGTACCTGGCGACCTCGGTGTACCAGCGCATCCTCGCGCTGATCCGTGGCCAGAGCCTGATGCAGCGCCCGCCTGTAGAGAGCATGAATGGCCTGTGGCTGCCCCATGAGCGCGATGCGGTGAGCAGCTTCCTGGGGTTGGCGATGATTGGCAGCCCGCAGAAAGTGCGGGCCAAGGTGGAGGTGCTACTGGAGCAGACCGGTGCGGATGAGCTGATCTTCACCAGCGACCTGTATGAGCATGCCGACCGGATCAGGTCTTACGAGCTGATGGCGCAGGCCCTGTAG,MTHLRDLKISTLDLVPVRADGGPAQSLRNSLDLAQHVERFGYNRFWVAEHHNMDGIASSATAVLMGYLAGGTSTIRIGSGGVMLPNHAPLVIAEQFGTLASLYPGRIDLGLGRAPGSDQMTARALRRERSGSADDFPDDVEELSRYLGPRTDDQKVIAVPGHDTEVPMWLLGSSLFSAQLAGMRGMPYAFASHFAPRYMHEAIRIYRDHFKPSTTLDKPYVMLGIPMVVAETDEKAEYLATSVYQRILALIRGQSLMQRPPVESMNGLWLPHERDAVSSFLGLAMIGSPQKVRAKVEVLLEQTGADELIFTSDLYEHADRIRSYELMAQAL,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ;",,,,,,,,Unknown,Class 3,,,,,,,,,,PF00296,"Bac_luciferase, Luciferase-like monooxygenase..",COG2141,"COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases [Energy production and conversion].",Energy production and conversion
NC_008027,Chromosome,PSEEN0044,YP_605855,104779357,Protein,43688,43921,,,hypothetical protein,,Class 4,ATGATCCGCGTAGCAATCGCCGTGCTGGCATCCCTGCTGGCCACGGCCGCACTGGCCGCCCCCAAGCCGTGCGAAGAACTGAAGGCCGAGATCGAAGCGAAGATCCAGGCGCGCGGGGTAACCTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAGCGACCCGAACATGGTCGTGGGCAGCTGCGATGGCGGGACGAAGAAGATCATCTACCAGAAGAATGACCGGTAG,MIRVAIAVLASLLATAALAAPKPCEELKAEIEAKIQARGVTSYTLEIVPNSEVSDPNMVVGSCDGGTKKIIYQKNDR,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 4 : Homologs of previously reported genes of unknown function ;",,,,,,,,Unknown,Class 3,,,,,,,,,,PF06649,"DUF1161, Protein of unknown function (DUF1161). This family consists of several short, hypothetical bacterial proteins of unknown function..",,,
NC_008027,Chromosome,PSEEN0045,YP_605856,104779358,Protein,44409,43996,,,lipoprotein,,Class 3,ATGCGCCAGCCCATGATGCTGTTCGCCATCAGCGCACTCGGGGCCTGCGCCAGCCCCTTGCCCCCCGTCGACCCGTCCAAGGCCTGGGTCGACCTTTATACCATCACCCCCGGTCGCACCATCATGGCCGACCGCCTGGACGGTAAGCGTCTGGATGATGGCCGCTACTTCCAGTTGACGCCCGGCAAGCATGAACTGGTGGTGCGTTTCGACTTCGAGGTTTATTCCGGCGGTTTCACCACCGACCCCACTGAAAGAACCTGCTACCTCACCGTGCGTTTCAACGACTTCAAGGCTGGCGAACGTTACCGGCTGGAAGCCCGGGCGCCGGTGATGCAGCCGCAGGTGCTGCTGTACGACGCCAGTCGCAAGGTGGTGGTGGATGAACCCAGCGAGGTGTTCTGCATTCCTTGA,MRQPMMLFAISALGACASPLPPVDPSKAWVDLYTITPGRTIMADRLDGKRLDDGRYFQLTPGKHELVVRFDFEVYSGGFTTDPTERTCYLTVRFNDFKAGERYRLEARAPVMQPQVLLYDASRKVVVDEPSEVFCIP,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.6.10 : Lipoprotein ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ;",,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_008027,Chromosome,PSEEN0046,YP_605857,104779359,Protein,44878,44465,,,lipoprotein,,Class 3,ATGCGTACTCTGTTTGCCGCCAGCACGCTCGTGCTGCTTTCAGGCTGTTCCACATTGCCAGACCCAGACCCGAAACAGGCCTGGATCGACCTGGCCCCAGGCAACAACGACTCGCTGCACGCGCTGCAAGTGGACGAACGCGACTGGGCCGACACCCGTTATTTCGAAGTGCAGCCCGGCAACCACGAGCTGACCGTGCGCTACCAATTCCCGGTGACGCCCAGCAACATCGGCGCGGTGGACGAACCGCTGTGGCGCGACTGCCAGCTCAACCTGACGTTCAAGGACTTCGCCGCCGGCCAGCGCTATCAGATGCAGGCGGGCAGCATTGGCTTCCGCCCCTGGATCAAGCTCTACGACCAGCAGCAGAAACTGCTCGGCCAAGGTGAGCCGGCAGGTTGCCAACGCAGCTGA,MRTLFAASTLVLLSGCSTLPDPDPKQAWIDLAPGNNDSLHALQVDERDWADTRYFEVQPGNHELTVRYQFPVTPSNIGAVDEPLWRDCQLNLTFKDFAAGQRYQMQAGSIGFRPWIKLYDQQQKLLGQGEPAGCQRS,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.6.10 : Lipoprotein ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ;",,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_008027,Chromosome,PSEEN0047,YP_605858,104779360,Protein,44967,46085,,,hypothetical protein,,Class 4,ATGCGCTGCAGCCGTCGGGCTCTCGACCGCGTTTTCATCCGGTTTGTTCCCGTGGCGGTCGCGCTCCTGCTGAACGGTTGCTCCAGCATGGGTTACTACGGGCAGTTGGCCGAGGGCCAATGGCAGTTGTTGCGGGCGCGCCAGCCGGTGGCGCAGGTGATCGCCGACCCTGCCACCCAGCCGGTGTTGCGTCAGCGTCTGCATTTCGCCGAGCAAGCCCGGGTATTTGCCAGCGAGCACCTGAAGCTGCCGGACAACGGCAGCTACCGCGTCTATGCCGACCTGGGGCGGCCTTACGTGGTGTGGAATGTATTCGCCACCCCGGAGCTTTCCTTGCAGCCGGTGACCCATTGCTTCCCCATCGCCGGTTGCGTGGCTTATCGCGGCTATTACCAGCAAGGTGATGCCCGTGGCGCGGCGGCGCTGATGCGCCAGGAAGGGCTGGATGTCTACGTGGGCGGCGTGGAGGCCTACTCGACACTGGGCTGGTTCGATGACCCTATCCTTTCGAGCATGGTGGGTTGGGGGAATGAGCGGCTGGCCACGGTGATCTTCCATGAGCTGGCGCACCAGCGTTTCTATGTGCAGGACGACACCGAGTTCAACGAGTCGTTTGCCTCCTTCGTCGAGCAGGAAGGATCGCGGCAATGGCGCATGGCGCGTGGGCTGGCAGCGGTCGAGGATGGCAGCGTGAAACAGCGCGAGGGGTTCACCCGGCTGATATTGGCCAGCCGTGAGCGGTTGCAGGCGATCTATGCCGGGCCGCTGGACGAGGCGGGCAAGCGGGCGGCCAAGCAGGCGGAGTTTGAACGGTTGCGCAGGGAGTACCGCGAGGTGCGGGACCGGGAGTGGGCTGGGGATCGAAGGTTTGATGCCTGGATCTATGCGCCGATGAACAATGCCAAGTTGCTGCCGTTTGGGCTGTATGACCAGTGGGTGCCTGTGTTTTCGCGGCTGTTCCAGGATGTTGGCGGAGACTGGTCACGGTTCTATGAGCGGGTCGAGGCGTTGGGGCGGCTTTCGATCGAAGAACGCAAGGCGGCGTTGACGCGATTGCAGCAACCTGGGGCCGCGTTGCGGCCCATCGCCGGCAAGCCGGCTCCTACAGGTGCTGACTAG,MRCSRRALDRVFIRFVPVAVALLLNGCSSMGYYGQLAEGQWQLLRARQPVAQVIADPATQPVLRQRLHFAEQARVFASEHLKLPDNGSYRVYADLGRPYVVWNVFATPELSLQPVTHCFPIAGCVAYRGYYQQGDARGAAALMRQEGLDVYVGGVEAYSTLGWFDDPILSSMVGWGNERLATVIFHELAHQRFYVQDDTEFNESFASFVEQEGSRQWRMARGLAAVEDGSVKQREGFTRLILASRERLQAIYAGPLDEAGKRAAKQAEFERLRREYREVRDREWAGDRRFDAWIYAPMNNAKLLPFGLYDQWVPVFSRLFQDVGGDWSRFYERVEALGRLSIEERKAALTRLQQPGAALRPIAGKPAPTGAD,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 4 : Homologs of previously reported genes of unknown function ;",,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,PF01433,"Peptidase_M1, Peptidase family M1. Members of this family are aminopeptidases. The members differ widely in specificity, hydrolysing acidic, basic or neutral N-terminal residues. This family includes leukotriene-A4 hydrolase, this enzyme also has an aminopeptidase activity..",COG4324,"COG4324, Predicted aminopeptidase [General function prediction only].",General function prediction only
NC_008027,Chromosome,PSEEN0048,YP_605859,104779361,Protein,46742,46092,,,"hydrolase, HAD family",,Class 3,ATGCATCAGCAGAACATCCTCTTCGACCTCGACGGCACCCTGACCGACCCGCGCTCAGGCATCACCCGTTCGATCCAGTACGCCCTGGCCAAGCTGGGCATCGACGAGCCCGACCTGGCCCGCCTCGAGCACTTCATCGGTCCACCCCTGTTGCAAGCCTTCATGCAGTTCTACGGTTTCGACGAGGCCAAGGCGTGGCAGGCGGTGAACTTCTACCGTGAGCGCTTCAAGGTGACCGGGCTGTACGAAAACCTGGTATTCGACGGTGTGCCTGAGCTGCTGCAAGCCCTCAATGCCCAAGGCCGCACCCTGTACATCGCCACCTCCAAGCCGTGGGAATATGCCCGTGAAATCGCCCGGCACTTCGCCTTCGCCCAGCACTTCAAGGTGATCTACGGCAGCGAACTGGACGGTACCCGCACCAACAAGGTCGAGCTGATTCGCCATCTGCTGGATGAAGAAGGGCTGGACCCGGCGCAGACCCTGATGATCGGTGACCGCAAGCACGACCTGATCGGCGCCCGCAGCAATGGGCTTCAGGCGGTAGCGGTGGGGTACGGGTTCGGCAGTCGGGAGGAGTTGGTGGCCGAGGCGCCAGCGTTCCACTTCGAGACACTGGCCGAGTTGCACCAGGCGTTCATGCACGGTTGA,MHQQNILFDLDGTLTDPRSGITRSIQYALAKLGIDEPDLARLEHFIGPPLLQAFMQFYGFDEAKAWQAVNFYRERFKVTGLYENLVFDGVPELLQALNAQGRTLYIATSKPWEYAREIARHFAFAQHFKVIYGSELDGTRTNKVELIRHLLDEEGLDPAQTLMIGDRKHDLIGARSNGLQAVAVGYGFGSREELVAEAPAFHFETLAELHQAFMHG,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ;",,,,,,,,Cytoplasmic,Class 3,,TIGR01454,AHBA_synth_RP,AHBA synthesis related protein,No data,3.20E-13,,No data,No data,PF00702,"Hydrolase, haloacid dehalogenase-like hydrolase. This family are structurally different from the alpha/ beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment. The rest of the fold is composed of the core alpha/beta domain..",COG0546,"Gph, Predicted phosphatases [General function prediction only].",General function prediction only
NC_008027,Chromosome,PSEEN0049,YP_605860,104779362,Protein,47347,46799,,,transferase,,Class 3,ATGGCCCTCCGGACCTTCCAGCAACACACGCCGAAAGTGGGAGCACGGGCCTTCGTCGACCGTTCGGCGGTGGTCATCGGCGACGTCGAGATCGGCGCGGACAGCTCGATCTGGCCGCTGACCGTAGTACGCGGCGACATGCACCGCATCCGCATCGGCGCGCGCACCAGCGTGCAGGACGGCAGTGTGCTGCACATCACCCACGCCGGGCCGTTCAACCCTGACGGTTTCCCGCTGATCATCGGCGACGAGGTGACCATCGGTCATAAAGTCATGCTGCATGGTTGCACCCTGGGCAACCGCATCCTGGTAGGCATGGGCAGCACGATCATGGACGGCGCCATCGTCGAGGATGAGGTGATCATCGGCGCCGGCAGCCTGGTTCCACCAGGAAAGCGCCTGGTCAGCGGCTACCTGTACATGGGCAGCCCGGTGAAGCAGGTGCGCCTGCTGAGCGAGCAGGAACACGCGTTCTTCCCCTACAGCGCCGGCAACTACGTGAAGCTCAAGGACCAACACCTGGCCGAAGGCTACGACCAACCGGAATGA,MALRTFQQHTPKVGARAFVDRSAVVIGDVEIGADSSIWPLTVVRGDMHRIRIGARTSVQDGSVLHITHAGPFNPDGFPLIIGDEVTIGHKVMLHGCTLGNRILVGMGSTIMDGAIVEDEVIIGAGSLVPPGKRLVSGYLYMGSPVKQVRLLSEQEHAFFPYSAGNYVKLKDQHLAEGYDQPE,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ;",,,,,,,,Unknown,Class 3,,TIGR02287,PaaY,phenylacetic acid degradation protein PaaY,No data,1.90E-12,,No data,No data,,,COG0663,"PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction only].",General function prediction only
NC_008027,Chromosome,PSEEN0050,YP_605861,104779363,Protein,47450,49501,prlC,,oligopeptidase A,,Class 2,GTGAGTGCGAACAACCCGCTGCTGCAGTCCCATGATCTGCCGCCCTTCTCGGCAATCCGCGCCGAGCATGTGCTGCCGGCGATCGAGCAGATCCTCGCCGACAACCGCAAGGCCATCGCCGACCTCCTCGAACAGCAGGGCAAGAACCCGACCTGGGCCGGCCTGGTGCTGGCGATGGACGAGCTCAACGACCGCCTGGGCGCCGCCTGGAGCCCGGTCAGCCACCTCAACGCGGTGTGCAACAGCAAGGAGCTGCGCGAGGCCTACGAGTCGTGCCTGCCGGCCCTGAGCGCCTATTCCACCGAGCTGGGCCAGAACCGCGCCCTGTTCGAAGCGTATGAAGCCCTGGCCGCCAGCCCAGAGGCCGCTGGCTTCGACGTGGCGCAGAAGACCATCATCGACCACGCCCTGCGCGACTTCCGCCTGTCGGGCATCGACCTGCCGGCCGACAAGCAGCAGCGCTACGCCGAAGTGCAGAGCAAGCTCAGCGAGCTGGGCAGCCGCTTCTCCAACCAACTGCTCGACGCCACCCAGGCCTGGACCAAGCACGTCACCGACGAGGCCGCCCTCGCCGGCCTGACCGACTCGGCCAAGGCGCAGATGGCCGCCGCCGCCCAGGCCAAGGGCCTCGACGGCTGGCTGATCACCCTGGAATTCCCCAGCTACTACGCGGTGATGACCTACGCCAGCGACCGCGCCCTGCGCGAAGAGCTGTACGCCGCCTACTGCACCCGCGCCTCCGACCAGGGCCCGAACGCCGGCCAGTTCGACAACGGCCCGGTGATGGAAGAGATCCTCGACCTGCGCCAGGAACTGGCCGGGCTGCTGGGCTACCAGAACTTTGCCGAACTGAGCCTGGCCACCAAGATGGCCGAGTCCAGCGACCAGGTGCTGACGTTCCTGCGTGACCTGGCCAAGCGCAGCAAGCCGTTCGCCGCCCAGGACCTGGAGCAGCTCAAGGCCTATGCCGCCGAGCAGGGTACCCCTGAGCTGGCCAGCTGGGACGCCGGTTACTTCGGCGAGAAGCTGCGCGAGCAGCGCTACAGCGTGTCGCAGGAAGCCCTGCGCGCCTACTTCCCGATCGACAAGGTGCTGACCGGCCTGTTCGCCATCGTCCAGCGCCTGTATGGCATCGAAATCAACGAACTCAAGGGCTTCGACAGCTGGCACCCGGACGTGCGCCTGTTCGAGATCAAGGAGAACGGCCAGCACGTCGGCCGCTTCTTCTTCGACCTCTACGCCCGCGCCAACAAGCGTGGCGGTGCCTGGATGGACGGTGCCCGCGACCATCGCCGTACCGCCGCCGGCGCGCTGCAGAGCCCGGTGGCCAACCTGGTGTGCAACTTCACCCCGGCCACGCCCGGCAAGCCAGCGCTGCTGACCCACGACGAAGTCACCACCCTGTTCCACGAATTTGGCCACGGCCTGCACCATCTGCTGACCCGCATCGAGCATGCCGGTGTATCCGGCATCAACGGTGTGGCCTGGGACGCGGTGGAGCTGCCGAGCCAGTTCATGGAAAACTGGTGCTGGGAGCCGGAAGGCCTGGCGTTGATCTCCGGCCACTACGAAACCGGCGAAGCGCTGCCCCAGGACCTGCTGGACAAGATGCTGGCGGCGAAGAACTTCCAGTCCGGCATGATGATGGTGCGCCAGCTGGAGTTCTCGCTGTTCGACTTCGAGCTGCACGCCACCCATGGCGACGGCCGCGGTGTGCTGCAGGTGCTCGAAGGCGTGCGCGACGAGGTCTCGGTGATGCGTCCGCCGGCCTACAACCGTTTCCCCAACAGTTTCGCCCACATCTTCGCCGGTGGTTACGCGGCGGGTTACTACAGTTACAAGTGGGCCGAAGTGCTGTCGGCCGACGCCTTCTCGCGCTTCGAAGAGGAAGGTGTGCTGAACGCCGAGACGGGCCGCGCCTTCCGCGAAGCCATCCTCGCTCGCGGTGGTTCCCGCGAGCCGATGGTGCTGTTCGTCGACTTCCGTGGCCGTGAACCTTCCATCGATGCATTGCTGCGCCACAGTGGTCTCACCGAGGACGCGGCGGCATGA,MSANNPLLQSHDLPPFSAIRAEHVLPAIEQILADNRKAIADLLEQQGKNPTWAGLVLAMDELNDRLGAAWSPVSHLNAVCNSKELREAYESCLPALSAYSTELGQNRALFEAYEALAASPEAAGFDVAQKTIIDHALRDFRLSGIDLPADKQQRYAEVQSKLSELGSRFSNQLLDATQAWTKHVTDEAALAGLTDSAKAQMAAAAQAKGLDGWLITLEFPSYYAVMTYASDRALREELYAAYCTRASDQGPNAGQFDNGPVMEEILDLRQELAGLLGYQNFAELSLATKMAESSDQVLTFLRDLAKRSKPFAAQDLEQLKAYAAEQGTPELASWDAGYFGEKLREQRYSVSQEALRAYFPIDKVLTGLFAIVQRLYGIEINELKGFDSWHPDVRLFEIKENGQHVGRFFFDLYARANKRGGAWMDGARDHRRTAAGALQSPVANLVCNFTPATPGKPALLTHDEVTTLFHEFGHGLHHLLTRIEHAGVSGINGVAWDAVELPSQFMENWCWEPEGLALISGHYETGEALPQDLLDKMLAAKNFQSGMMMVRQLEFSLFDFELHATHGDGRGVLQVLEGVRDEVSVMRPPAYNRFPNSFAHIFAGGYAAGYYSYKWAEVLSADAFSRFEEEGVLNAETGRAFREAILARGGSREPMVLFVDFRGREPSIDALLRHSGLTEDAAA,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.2.3 : Proteins/peptides/glycopeptides ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ;",,,,,,3.4.24.- ;,,Cytoplasmic,Class 3,,,,,,,,,,PF01432,"Peptidase_M3, Peptidase family M3. This is the Thimet oligopeptidase family, large family of mammalian and bacterial oligopeptidases that cleave medium sized peptides. The group also contains mitochondrial intermediate peptidase which is encoded by nuclear DNA but functions within the mitochondria to remove the leader sequence..",COG0339,"Dcp, Zn-dependent oligopeptidases [Amino acid transport and metabolism].",Amino acid transport and metabolism
NC_008027,Chromosome,PSEEN0051,YP_605862,104779364,Protein,49498,49776,,,hypothetical protein,,Class 4,ATGAGCGAGGTAGCCGTGAGCAAGAGCAAACGACGCTTCATCGCCGGTGCCGTATGCCCGGCGTGCAGCGAGATGGACAAGCTGATGATGTGGAACGAGGACGGCGTGCCGCACCGCGAGTGCGTGGCCTGCGGGTTCACCGACACCCTGAACGAACAGGGCCTGTCGGTACCCAAGGAGCTGGGCACCCGGGTCAACCACCTGGAACCGAAGGCAGCGCCGGCCAAGGTGCAGACCGTGCAGTTCTTCCCCAATCCGAAGCTGAAGAAGCCAGAGTAA,MSEVAVSKSKRRFIAGAVCPACSEMDKLMMWNEDGVPHRECVACGFTDTLNEQGLSVPKELGTRVNHLEPKAAPAKVQTVQFFPNPKLKKPE,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 4 : Homologs of previously reported genes of unknown function ;",,,,,,,,Cytoplasmic,Class 3,,TIGR02443,TIGR02443,conserved hypothetical protein,No data,1.90E-31,,No data,No data,,,COG3529,"COG3529, Predicted nucleic-acid-binding protein containing a Zn-ribbon domain [General function prediction only].",General function prediction only
NC_008027,Chromosome,PSEEN0052,YP_605863,104779365,Protein,49978,51033,,,hypothetical protein,,Class 4,ATGACCCCTGCCCCCCTCCGTGGTCGCGGCACCGCCGCCAACCCCCACAACCGCTTCGCTCCAAGCCGCTCGGTGGCCGAGGACGACGGCTGGCACCAGGAAGTCCCGCCCACCCAAGGCACCGAAGTGCGGATCGAGACGGCCAAGACCATCATCGCCCGCAACACTTCCCCCGACCTGCCCTTCGACCGTTCCATCAACCCCTATCGCGGCTGTGAGCACGGCTGCATTTACTGTTACGCCCGCCCCAGCCACGCCTACTGGGACCTCTCCCCCGGCCTGGACTTCGAAACCAAGCTGATCGCCAAGACCAACGCCGCCGAAGTGCTCGAGCAGCAACTGAGCAAACCCGGCTACGTCTGTGCGCCGATCAACCTCGGCTCCAACACCGATCCCTACCAGCCCATCGAGCGCGAGCAGCAACTCACCCGGCGCTTGCTCGAAGTGCTGCTGCGCTACCGCCATCCGGTCACCATCGTCACCAAAGGCTCGCTGATACTGCGCGACCTCGACCTGATCAGCGAACTGGCCAGCCAGCGCCTGGCGCGGGTGATGATCAGCCTCACTACCCTCGACGACGAACTCAAGCGCACGCTGGAGCCGCGGGCGGCGGCGCCCAAGGCGCGACTTCGCGCGATCCGGGTATTGCGCGAGGCGGGAGTGCCAGTGGGCGTGCTGTGCTCGCCGATGATTCCGATGATCAACGACAGCGAACTGGAGCGCTTGCTGGAAGCGGCGAAGGAGGCCGGCGCGCAGAGCGCGGCGTACATGATGCTGCGCCTGCCGCTGGAAGTGGCGCCGTTGTTCGAGCAGTGGCTGCAGGATCACTACCCACAGCGCGCCGCTCATGTGTTGAGCCTGATCCGCCAGAGCCGTGGTGGTGAGCTGTATGACAGCCGGTTCGGTGCGCGGATGCGCGGTGAAGGGGTGTTCGCCGAATTGCTGGCGCAGCGCTTTCGCAAGGCGGCCAGACGGTTGGGGTTTGAAGGGCGGGAAGACTTGGCGCTGGACTGCACGGCCTTTTGTCCGCCGGGCTCGCAGATGGCGTTGTTCTGA,MTPAPLRGRGTAANPHNRFAPSRSVAEDDGWHQEVPPTQGTEVRIETAKTIIARNTSPDLPFDRSINPYRGCEHGCIYCYARPSHAYWDLSPGLDFETKLIAKTNAAEVLEQQLSKPGYVCAPINLGSNTDPYQPIEREQQLTRRLLEVLLRYRHPVTIVTKGSLILRDLDLISELASQRLARVMISLTTLDDELKRTLEPRAAAPKARLRAIRVLREAGVPVGVLCSPMIPMINDSELERLLEAAKEAGAQSAAYMMLRLPLEVAPLFEQWLQDHYPQRAAHVLSLIRQSRGGELYDSRFGARMRGEGVFAELLAQRFRKAARRLGFEGREDLALDCTAFCPPGSQMALF,"inference: non-experimental evidence, no additional details recorded ;inference: ab initio prediction:AMIGene:2.0 ;Evidence 4 : Homologs of previously reported genes of unknown function ;",,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,PF04055,"Radical_SAM, Radical SAM superfamily..",COG1533,"SplB, DNA repair photolyase [DNA replication, recombination, and repair].","DNA replication, recombination, and repair"
NC_008027,Chromosome,PSEEN0053,YP_605864,104779366,Protein,51422,52141,cynT-2,,carbonic anhydrase,,Class 2,ATGCCCATCAAGGACCCATCCAAGGTTGTCCCGGCCGCACCCGCCGAAAGCGCCGATGCCGCCCTGAAGCATATCGTCGACGGCTTCCTGCGGTTCCACACCGAAGTCTTCCCCGAGCAGCAGGAGCTGTTCAAGAAGCTGGCCACCGCGCAAAAGCCGCGGGCCATGTTCATCACCTGCGCCGACTCGCGCATCGTCCCCGAGCTGATCACCCAGAGCTCGCCGGGCGACCTGTTCGTCACCCGTAACGTCGGTAACGTCGTGCCGCCGTATGGCCAGATGAACGGCGGTGTTTCCAGCGCCATCGAATACGCGGTGCTGGCGCTGGGCGTGCACCACATCATCGTCTGCGGCCACTCCGACTGCGGCGCGATGCGCGCGGTGCTCAACCCGCACTCGCTGGACAAGATGCCGACCGTTTCCGCCTGGCTGCGCCATGCCGAAGTGGCACGCACCGTGATCGAGGACAACTGCTCCTGCGGCAGCGAGCACGAAAGCATGCAGTTGCTGACCAAAGAGAACGTCATCGCCCAGCTGCACCACCTGCGCACCCACCCGTCGGTCGCCTCGCGCCTGGCAGCCGGCCAACTGCACATCCATGGCTGGATCTACGACATCGAAACCAGCCAGATCGAAGCCTACAATGCCGCCAGTGATCGCTTCCTGCCACTGACCGCAGGCGAGCCGATCCCCTCCGCTACTCCGAGAGGCCGCTACTAA,MPIKDPSKVVPAAPAESADAALKHIVDGFLRFHTEVFPEQQELFKKLATAQKPRAMFITCADSRIVPELITQSSPGDLFVTRNVGNVVPPYGQMNGGVSSAIEYAVLALGVHHIIVCGHSDCGAMRAVLNPHSLDKMPTVSAWLRHAEVARTVIEDNCSCGSEHESMQLLTKENVIAQLHHLRTHPSVASRLAAGQLHIHGWIYDIETSQIEAYNAASDRFLPLTAGEPIPSATPRGRY,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 5.6.2 : Detoxification (xenobiotic metabolism) ;function prediction: 1.7.24 : Cyanate catabolism ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ;",,,,,,4.2.1.1 ;,,Unknown,Class 3,,,,,,,,,,PF00484,"Pro_CA, Carbonic anhydrase..",COG0288,"CynT, Carbonic anhydrase [Inorganic ion transport and metabolism].",Inorganic ion transport and metabolism
NC_008027,Chromosome,PSEEN0054,YP_605865,104779367,Protein,52331,53866,,,sulfate transporter,,Class 3,ATGGTGAACAAGACACAGATCAAAGCGGCAGTGCCGCGTGAGTTGCTGGCCTCGGTGGTGGTGTTCCTGGTGGCCCTGCCGTTGTGCATGGGCATTGCCATCGCCTCCGGCATGCCCCCGGCCAAAGGCCTGATCACCGGCATCATCGGCGGAATCGTGGTGGGCTTCCTGGCGGGCTCGCCGCTGCAGGTGAGCGGCCCGGCGGCGGGCCTGGCGGTGCTGGTGTTCGAGCTGGTGCGCCAGCATGGCATGGCGATGCTCGGGCCGATCCTGTTGCTGGCGGGGTTGCTGCAACTGCTGGCCGGACGCTTGCGCTTGGGGTGCTGGTTCCGGGTAACGGCGCCAGCGGTGGTGTACGGCATGCTCGCCGGCATCGGTGTGCTGATCGTGCTGTCCCAGGTGCACGTGATGTTCGACACGGCGCCGCAGCCGTCGGGTGTGGATAACCTGCTGGGCTTCCCGGCGACGCTGGCTTCGGCCCTGCCGCTGGAGCGCGCGGGCAATGGCTGGCAGGCCGGCGCATTGGGCCTGGGCACCATTGCCATCATGTGGGGCTGGGAGCGCTTTCGCCCGCAACGTTTGCGCTTCATCCCTGGTGCGCTGCTCGGGGTCGCAGCGATGACCGCCGTCAGCCTGTGGCTGGCGCTGCCGGTCAATCGCGTGCAGGTACCAGCCGACCTGTCCGAAGCCATCGACTGGCTACGCCCGGACGATCTGCTCAAGCTGGCCGACCCCACGCTGCTGGTGGCAGCTTTCGCCCTCGCATTCATCGCCAGCGCCGAGACCTTGCTGTCCGCAGCCGCGGTGGACCGCATGCACAGCGGCCAGCGTTCGGACTTCGACCGTGAACTGTCGGCGCAGGGCATCGGCAACATGCTCTGCGGTGTGCTCGGCGCGCTGCCTATGACCGGGGTGATCGTGCGCAGCTCGGCCAACGTGCAGGCCGGCGCGCAGACCCGGGCTTCGGCGATCTTGCATGGTGTGTGGTTGCTGGCCTTCGTGGTCGTGTTGAGCAGCGTGCTGCAGCAGATCCCGGTGGCGAGCCTGGCGGGCGTGCTGGTGTACACCGGCGTGAAGCTGGTGGACTTCAAGGCATTCCGCGGCCTGGGCCGTTATGGGCGGATGCCGATGTTCACCTATGCCGCCACGGCACTGGCGATTGTCTTCACCGATTTGCTGACCGGGGTGCTGCTGGGCTTTGCCCTCACCCTGCTGAAGTTGGCGTTCAAGGCGGCGCGATTGAAGATCAACCTGGTGGCGCTGGATGCGCCGGGGCACATGGAGCTGCGCCTGAGCGGGGCGGCGACGTTCCTCAAGGTGCCGGCGCTGACCCAGGTGCTGGAGACCGTGCCGGAAGGGACGACGCTACATGTACCCTTAGGCAACCTGAGCTATATCGACCATTCCTGCCTGGAGTTGCTGGAGGACTGGGGGCGCAGTGGCGCGGTCAAGGGGGCGCGGTTGGTGCTGGAAGAGCGGCGGCTGAAGCGGCGGGTCGAGGGGCGGCTGCGGACTACGGCAGGGCTTGGGGCTTGA,MVNKTQIKAAVPRELLASVVVFLVALPLCMGIAIASGMPPAKGLITGIIGGIVVGFLAGSPLQVSGPAAGLAVLVFELVRQHGMAMLGPILLLAGLLQLLAGRLRLGCWFRVTAPAVVYGMLAGIGVLIVLSQVHVMFDTAPQPSGVDNLLGFPATLASALPLERAGNGWQAGALGLGTIAIMWGWERFRPQRLRFIPGALLGVAAMTAVSLWLALPVNRVQVPADLSEAIDWLRPDDLLKLADPTLLVAAFALAFIASAETLLSAAAVDRMHSGQRSDFDRELSAQGIGNMLCGVLGALPMTGVIVRSSANVQAGAQTRASAILHGVWLLAFVVVLSSVLQQIPVASLAGVLVYTGVKLVDFKAFRGLGRYGRMPMFTYAATALAIVFTDLLTGVLLGFALTLLKLAFKAARLKINLVALDAPGHMELRLSGAATFLKVPALTQVLETVPEGTTLHVPLGNLSYIDHSCLELLEDWGRSGAVKGARLVLEERRLKRRVEGRLRTTAGLGA,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 4.2.A.53 : The Sulfate Permease (SulP) Family ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ;",,,,,,,,Cytoplasmic Membrane,Class 3,GO:0016020 ;,TIGR00815,sulP,sulfate permease,subfamily,4.90E-26,,Transport and binding proteins,Anions,PF00916PF00860,"Sulfate_transp, Sulfate transporter family. Mutations in human diastrophic dysplasia protein lead to several diseases..Xan_ur_permease, Permease family. This family includes permeases for diverse substrates such as xanthine, uracil and vitamin C. However many members of this family are functionally uncharacterised and may transport other substrates. Members of this family have ten predicted transmembrane helices..",COG0659,"SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].",Inorganic ion transport and metabolism
NC_008027,Chromosome,PSEEN0055,YP_605866,104779368,Protein,54583,53942,,,hypothetical protein,,Class 4,ATGAACATCGCTGCTGTACGCGAGCAGATCGAAACCGCCCATCAACATGAGAGCCGCACAGGCCAACTGAAAGCCCGCCTCGAACTGCAATTGCCGCACCTGCATCCATCGATTCAACTACCCCAGCAGGATGCCCAGGGTACCTTGGCGCGCTTCGTCGGCGCCTACATCAACGAGGTTCCGGAACTGCTCGAGGCCGCGCACAACGTGGCACTCGAAGCCGGTATCGAGTCGCAGATCAAACCGGTGCTGAAGATCGCCGAAGCCTACTTCCTGCAGCCGCCCAGCGTGATGGCCGGGCATGTCGGTCTCGACTGCCTGCTGGACGAGGCCTACCTGGCGCACCGCCTGGTCGAGGAGGTCAACGACCTGTACATCCGCCACTTCCAGCAGCCGCTGATTCCGGTGGATACCACGGTGGCCAACCTGATCGCCCACCAGTTGATCGGCGAGACTTTTGCCAACCAGCTGGACGAGGTGGTGCACCATTCGGTGGATGAAATGCTCGATGACGAAAGCTTCGCCGCTGAATCTGTGGAGGCTTATCGCGACAAGCTGTCGAGCCCGGAAACCGGCGCGGCGTGGAAACGCTGGCCGTGCCTGTCGCGCCAACTTGGGGTCGAGCTGGGCCAATCGGCTTGA,MNIAAVREQIETAHQHESRTGQLKARLELQLPHLHPSIQLPQQDAQGTLARFVGAYINEVPELLEAAHNVALEAGIESQIKPVLKIAEAYFLQPPSVMAGHVGLDCLLDEAYLAHRLVEEVNDLYIRHFQQPLIPVDTTVANLIAHQLIGETFANQLDEVVHHSVDEMLDDESFAAESVEAYRDKLSSPETGAAWKRWPCLSRQLGVELGQSA,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 4 : Homologs of previously reported genes of unknown function ;",,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,,,,,
NC_008027,Chromosome,PSEEN0056,YP_605867,104779369,Protein,54963,56090,coxB,,"cytochrome c oxidase, subunit II",,Class 3,ATGATGCGACATCCACATGTCTGGATGGGCCTGTTGCTGTGGTCAATGTTTGGTCAGGCACAGGCGGCATGGACCGTGAACATGGCTCCCGGGGCGACGGACGTCTCCCACGCCGTGTTCGACCTGCACATGACCATCTTCTGGATCTGCGTGATCATCGGCATCGTGGTGTTCGGCGCGATGTTCTGGTCGATGGTCATCCATCGCCGCTCCACTGGCCAGCAGCCCGCGCATTTTCACGAGCACACCTGGGTTGAGATTCTCTGGACCGTCGTCCCCTTCCTGATCCTCGTGGCCATGGCCATCCCGGCCACCAAGACCCTGATCGAAATCTACGACGCCAGTGAGTCGGACATCGACATCCAGGTCACCGGCTACCAGTGGAAGTGGCACTACAAGTACCTGGGCCAGGACGTGGAGTTCTTCAGCAACCTGGCCACCCCCGCCGACCAGATCCACAACAAGGCGCCCAAGGACGAGCACTACCTGCTCGAAGTCGACCAGCCGCTGGTGCTGCCGGTGGGGGCCAAGGTGCGCTTCCTGGTCACCGCCGCCGATGTCATCCATTCCTGGTGGGTACCTGCCTTCGCGGTCAAGCGCGACGCCATCCCCGGCTTCGTCAACGAGGCTTGGACCCGCATCGAGAAACCCGGCATCTACCGTGGCCAGTGCACCGAGCTGTGCGGCAAGGACCACGGTTTCATGCCGGTGGTGGTGGAGGTGAAGTCCAAGGCTGACTACGAGACCTGGCTGGGCGAGCGCAAGGCCGAGGCGGCCAAGCTCAAGGAGCTGACCAGCAAGGACTGGACCCTGCAGGAGCTGGTCGAACGCGGCGACAAGGTCTACCACACCACTTGCGTGGCCTGTCACCAGGCCGAAGGCCAGGGCCTGCCGCCGATGTTCCCGGCGCTCAAGGGTTCGAAGATCGCCACCGGGCCGAAGGAAGGCCACCTGAGCATTGTCTTTCACGGTAAGCCCGGCACGGCCATGGCCGCATTCGGCAAGCAACTCTCGGAAGTCGACATCGCCGCCGTGGTCACCTACGAGCGCAACGCCTGGGGCAACAACAAGGGCGACATGGTCACGCCGAAGGACGTGCTGGCGCTCAAGCAGGCGGAAAGCAAATGA,MMRHPHVWMGLLLWSMFGQAQAAWTVNMAPGATDVSHAVFDLHMTIFWICVIIGIVVFGAMFWSMVIHRRSTGQQPAHFHEHTWVEILWTVVPFLILVAMAIPATKTLIEIYDASESDIDIQVTGYQWKWHYKYLGQDVEFFSNLATPADQIHNKAPKDEHYLLEVDQPLVLPVGAKVRFLVTAADVIHSWWVPAFAVKRDAIPGFVNEAWTRIEKPGIYRGQCTELCGKDHGFMPVVVEVKSKADYETWLGERKAEAAKLKELTSKDWTLQELVERGDKVYHTTCVACHQAEGQGLPPMFPALKGSKIATGPKEGHLSIVFHGKPGTAMAAFGKQLSEVDIAAVVTYERNAWGNNKGDMVTPKDVLALKQAESK,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.4.2 : Electron acceptor ;Evidence 2b : Function of strongly homologous gene ;",,,,,,1.9.3.1 ;,,Cytoplasmic Membrane,Class 3,GO:0016682 ;,TIGR01432,QOXA,"quinol oxidase AA3, subunit II",No data,2.70E-08,,No data,No data,PF00116PF02790PF00034,"COX2, Cytochrome C oxidase subunit II, periplasmic domain..COX2_TM, Cytochrome C oxidase subunit II, transmembrane domain. The N-terminal domain of cytochrome C oxidase contains two transmembrane alpha-helices..Cytochrom_C, Cytochrome c. The Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included..",COG1622,"CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion].",Energy production and conversion
NC_008027,Chromosome,PSEEN0057,YP_605868,104779370,Protein,56122,57711,coxA,,"cytochrome c oxidase, subunit I",,Class 2,ATGAGTGCAGTGATCGACGACCACGCCCACGGTCATGAACACGCCCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCACAAGGACATCGGCACGATGTACCTGTGGTTCGCCTTCACCATGTTCCTGCTCGGCGGCTCGTTCGCCATGGTGATCCGCGCCGAGCTGTTCCAGCCCGGGCTGCAGATCGTCGAGCCGGCGTTCTTCAACCAGATGACCACCATGCACGGGCTGATCATGGTGTTCGGCGCGGTGATGCCGGCGTTCGTCGGGCTGGCCAACTGGATGATCCCGCTGATGATCGGCGCCCCGGACATGGCCCTGCCGCGAATGAACAACTTCAGCTTCTGGCTGCTGCCGGCGGCGTTCCTGCTGCTGGTCTCGACCCTGTTCAGCCCTGGCGGCGGGCCCAACTTCGGCTGGACCTTCTACGCGCCGCTGTCGACCACCTACGCCCCGGCCAGCGTCACCTTCTTCATCTTTGCCATCCACCTGATGGGCATCAGCTCGATCATGGGCGCGATCAACGTGATCGCCACCATCCTCAACCTGCGCGCCCCGGGCATGACCCTGATGAAGATGCCGCTGTTCGTCTGGACCTGGCTGATCACCGCGTTCCTGCTGATCGCGGTGATGCCGGTGCTGGCCGGCGTGGTGACCATGATGCTGATGGACATCCACTTCGGCACCAGCTTCTTCAGTGCCGCCGGTGGTGGTGACCCGGTGCTGTTCCAGCATGTGTTCTGGTTCTTCGGCCACCCCGAGGTGTACATCATGATCCTGCCCGCCTTCGGCGCGGTCAGCTCGATCATCCCGGCGTTCTCGCGCAAGCCGCTGTTCGGCTACACCTCGATGGTCTACGCCACCGGCGCGATCGCCTTCCTGTCGTTCATCGTCTGGGCCCACCACATGTTCGTGGTCGGTATCCCGGTGGTGGGCGAGCTGTTCTTCATGTACGCCACCATGCTGATCGCCGTGCCCACCGGGGTGAAGGTGTTCAACTGGGTCAGCACCATGTGGGAGGGCTCGCTGACCTTCGAGACGCCGATGCTGTTCGCCATCGCCTTCGTCATCCTGTTCACCATCGGTGGCTTCTCCGGGTTGATGCTGGCCATCGCCCCGGCGGACTTCCAGTACCACGACACTTACTTCGTGGTCGCCCACTTCCACTACGTGCTGGTGCCCGGGGCGATCTTCGGTATCTTCGCCTCGGCCTACTACTGGCTGCCGAAATGGACCGGGCACATGTATGACGAAACCCTCGGCAAGCTGCACTTCTGGTTGTCGTTCATCGGCATGAACATGGCCTTCTTCCCCATGCACTTCGTCGGTCTGGCCGGCATGCCACGGCGGATCCCCGACTACAACCTGCAATTTGCCGACTTCAACATGGTCTCGTCGATCGGCGCCTTCATGTTCGGTGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCCGCGGCGGTGCGCCGGCAGCGGCCAAGCCCTGGGACGGTGCCGAGGGGCTGGAGTGGTCGATTCCGTCGCCGGCGCCTTATCACACCTTCCAGACCCCTCCGGAAGTGAAGTAG,MSAVIDDHAHGHEHAHGPAKGLMRWVLTTNHKDIGTMYLWFAFTMFLLGGSFAMVIRAELFQPGLQIVEPAFFNQMTTMHGLIMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPAAFLLLVSTLFSPGGGPNFGWTFYAPLSTTYAPASVTFFIFAIHLMGISSIMGAINVIATILNLRAPGMTLMKMPLFVWTWLITAFLLIAVMPVLAGVVTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGHPEVYIMILPAFGAVSSIIPAFSRKPLFGYTSMVYATGAIAFLSFIVWAHHMFVVGIPVVGELFFMYATMLIAVPTGVKVFNWVSTMWEGSLTFETPMLFAIAFVILFTIGGFSGLMLAIAPADFQYHDTYFVVAHFHYVLVPGAIFGIFASAYYWLPKWTGHMYDETLGKLHFWLSFIGMNMAFFPMHFVGLAGMPRRIPDYNLQFADFNMVSSIGAFMFGATQIFFLFIVIKCIRGGAPAAAKPWDGAEGLEWSIPSPAPYHTFQTPPEVK,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.4.2 : Electron acceptor ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ;",,,,,,1.9.3.1 ;,,Cytoplasmic Membrane,Class 3,,,,,,,,,,PF00115,"COX1, Cytochrome C and Quinol oxidase polypeptide I..",COG0843,"CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 [Energy production and conversion].",Energy production and conversion
NC_008027,Chromosome,PSEEN0058,YP_605869,104779371,Protein,57722,58279,,,cytochrome c oxidase assembly protein,,Class 3,ATGGACGGCCTGTCGCTCAAACGCCTGGTCACCCGCCTGCTGATGCTGACCGTGGTGATGTTCGCCTTCGGCTTTGCCCTGGTGCCGATCTACGACGTGATGTGCAAGGCCTTTGGCATCAACGGCAAGACCGGTGGGCAGTACGAGGGCAGCCAGGTGAGTGACCCGTCGCGCTCGGTGCGGGTGCAGTTCATGTCGACCAACGCCGGTGACATGAGCTGGGAGTTCCACTCCACCGCCGACCAGCTCGAGGTCAACCCGGGGGCGGTGAACCAGATGATCTTCATCGCCCGCAACCCGACCGACAAACCCATGAGCGCCCAGGCCATCCCCAGCATCACCCCGGCCGAGGCCGCGGCGTATTTCCACAAGACCGAGTGCTTCTGTTTCACCCAGCAGGTGCTGCAGCCGGGCGAGCGCATCGAGATGCCGGTGCGTTTCATCGTCGACCGCGACCTGCCGGAGGCGGTGAAGCACCTGACCCTGGCCTACACCCTGTTCGACATCACCGCTCGCCACCCCCCGGTCGCCCATGTCGCGACCGAGGCCGCCCGTTGA,MDGLSLKRLVTRLLMLTVVMFAFGFALVPIYDVMCKAFGINGKTGGQYEGSQVSDPSRSVRVQFMSTNAGDMSWEFHSTADQLEVNPGAVNQMIFIARNPTDKPMSAQAIPSITPAEAAAYFHKTECFCFTQQVLQPGERIEMPVRFIVDRDLPEAVKHLTLAYTLFDITARHPPVAHVATEAAR,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.6.15.1 : Cytochromes ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ;",,,,,,,,Unknown,Class 3,,,,,,,,,,PF04442,"CtaG_Cox11, Cytochrome c oxidase assembly protein CtaG / Cox11. Cytochrome c oxidase assembly protein is essential for the assembly of functional cytochrome oxidase protein. In eukaryotes it is an integral protein of the mitochondrial inner membrane. Cox11 is essential for the insertion of Cu(I) ions to form the CuB site. This is essential for the stability of other structures in subunit I, for example haems a and a3, and the magnesium/manganese centre. Cox11 is probably only required in sub-stoichiometric amounts relative to the structural units. The C terminal region of the protein is known to form a dimer. Each monomer coordinates one Cu(I) ion via three conserved cysteine residues (111, 208 and 210) in Saccharomyces cerevisiae. Met 224 is also thought to play a role in copper transfer or stabilising the copper site..",COG3175,"COX11, Cytochrome oxidase assembly factor [Posttranslational modification, protein turnover, chaperones].","Posttranslational modification, protein turnover, chaperones"
NC_008027,Chromosome,PSEEN0059,YP_605870,104779372,Protein,58296,59183,,,"cytochrome c oxidase, subunit III",,Class 3,ATGGCAAGCCACGAGCATTACTACGTCCCGGCGCAGAGCAAGTGGCCGATCATCGCCACGATCGGCATGTTCATTACCGTGTTCGGCCTGGGGACCTGGTTCAACGACCTCAAGGCCGGGCACCCGGAATCCCACGGGCCGCTGATCTTCTTCGTCGGCGGGCTGTTCCTGGCGTACATGTTGTTCGGCTGGTTCGGCGCGGTGGTCAAGGAGAGCCATGCGGGGCTGTACAGCTCGCAGATGGACCGCTCGTTCCGCTGGGGCATGAGCTGGTTCATCTTTTCCGAGGTGATGTTCTTCCTGGCGTTCTTCGGGGCGCTGTTCTATGTGCGGGTGCTGGCAGGGCCATGGCTGGGGGGCGAGGGGCACAAGGGCGTGGCGCACATGCTCTGGCCTAACTTCGAGTTTGTCTGGCCACTGCTGCACACGCCTGACCCGAAACTGTTCCCGCCGCCCAAGGAGGTGATCGATCCGTGGCACCTGCCGCTGATCAACACCATCCTGCTGGTGAGTTCCAGCGTGACCGTGACCATCGCCCACCACGCCTTGCGCAAGGGGCATCGCGGCCCGCTGAAACTGTGGCTGGGGCTGACGATTCTGCTGGGGCTGTCGTTCCTGGCGTTGCAGGCCTACGAGTACCACGAGGCCTACACCAAGCTGGGGCTGACGCTGGGGTCTGGGGTCTATGGCGCGACGTTCTTCATGCTCACGGGCTTCCACGGCGCGCATGTGACGTTGGGCACGATAATCCTGTTCGTGATGTTCTGCCGGGTGCTGCGGGGGCACTTCAACCCGGAGAAGCACTTCGGGTTCGAGGCGGCGAGTTGGTACTGGCACTTCGTCGATGTGGTGTGGGTGGGGTTGTTCATCTTTGTTTATGTGCTGTAG,MASHEHYYVPAQSKWPIIATIGMFITVFGLGTWFNDLKAGHPESHGPLIFFVGGLFLAYMLFGWFGAVVKESHAGLYSSQMDRSFRWGMSWFIFSEVMFFLAFFGALFYVRVLAGPWLGGEGHKGVAHMLWPNFEFVWPLLHTPDPKLFPPPKEVIDPWHLPLINTILLVSSSVTVTIAHHALRKGHRGPLKLWLGLTILLGLSFLALQAYEYHEAYTKLGLTLGSGVYGATFFMLTGFHGAHVTLGTIILFVMFCRVLRGHFNPEKHFGFEAASWYWHFVDVVWVGLFIFVYVL,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.4.2 : Electron acceptor ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ;",,,,,,1.9.3.1 ;,,Cytoplasmic Membrane,Class 3,,,,,,,,,,PF00510,"COX3, Cytochrome c oxidase subunit III..",COG1845,"CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 [Energy production and conversion].",Energy production and conversion
NC_008027,Chromosome,PSEEN0060,YP_605871,104779373,Protein,59484,59281,,,hypothetical protein,,Class 4,ATGCTCAAGGCCGCGATAGTCCTGATGCTGCTGGCCACGGTCGCCAGCCTGTTCAGTGGCCTGGTATTCCTGGTCAAGGACGACGACCATTCGACCCGCCTGCTCAAGGCCCTGACCGTGCGTGTCACCCTGGCAGCCCTGACCATCGGGCTGGTCGCCTGGGGCTTCATCAGCGGCCAACTGGTGTCGCACGCCCCCTTCTAA,MLKAAIVLMLLATVASLFSGLVFLVKDDDHSTRLLKALTVRVTLAALTIGLVAWGFISGQLVSHAPF,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 4 : Homologs of previously reported genes of unknown function ;",,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_008027,Chromosome,PSEEN0061,YP_605872,104779374,Protein,59547,60290,,,hypothetical protein,,Class 4,ATGAGGCCGTTCCGTCCGGGCTGGATCCCGACCCTGGTGGTGCTCGCGCTGCTGCCGGGGCTGATCGCGCTTGGCTGCTGGCAACTGCGCCGCGCCGACGAAAAGCGCGCCCTGCTCGATACCTACACCGAACGCCAGATCGAGGCGCCGGTGGCTGCCGCGCAGCTACGCCAGTTGCCGGATCCTGCCTTCTACCCGGTGCACCTCTACGGCAGTTTCGACGCCGAGCACAGCCTGCTGCTGGATAACCAGATGCGCGATGGCAAACCCGGCGTCGAGCTGTTGCAGCCGTTCCACGACCAGGCCAGCGGGCAGTGGCTGCTGGTCAATCGCGGCTGGCTGCCCTGGCCGGATCGCCGTGTGCCGGTGCGCTTCGACACCCCCGATCAGCCGCTGGCGCTGGAAGCCTTGGTGTATGTCGCGCCCGGCAAGACGTTCCAGCTCCACCCCGACTCGACCGAAGGCCGCTGGCCGCATCTGCTCACCGCCATCGACCCGACTGCGCTGTGGCAACAACTGGGACGGGAAGGTTTCGCCCATGAACTGCGCCTGCAACCGGGCCCAGCTAGTTATCGGCTGGACTGGCCGGTAGTCGCCATGGGCCCCGAGAAGCACCTGGGCTACGCCGTGCAGTGGTTCGCCCTGGCCACGGCATTGCTGCTGCTCTACCTCTATTTCGGCTGGCATCACAACGACAAGGAGAACCGCCATGGCCGCCGCCACGAGTCCATTGCACGCACCTGA,MRPFRPGWIPTLVVLALLPGLIALGCWQLRRADEKRALLDTYTERQIEAPVAAAQLRQLPDPAFYPVHLYGSFDAEHSLLLDNQMRDGKPGVELLQPFHDQASGQWLLVNRGWLPWPDRRVPVRFDTPDQPLALEALVYVAPGKTFQLHPDSTEGRWPHLLTAIDPTALWQQLGREGFAHELRLQPGPASYRLDWPVVAMGPEKHLGYAVQWFALATALLLLYLYFGWHHNDKENRHGRRHESIART,"inference: non-experimental evidence, no additional details recorded ;inference: ab initio prediction:AMIGene:2.0 ;Evidence 4 : Homologs of previously reported genes of unknown function ;",,,,,,,,Unknown,Class 3,,,,,,,,,,,,COG3346,"COG3346, Uncharacterized conserved protein [Function unknown].",Function unknown
NC_008027,Chromosome,PSEEN0062,YP_605873,104779375,Protein,60256,60834,,,hypothetical protein,,Class 4,ATGGCCGCCGCCACGAGTCCATTGCACGCACCTGAAGGCCGCAAGGCCCGCGGGCGCCTGCAGTTGCTGCTGATCCTGTTCGTCGTGCTCGGGCCGATGATCCTCGCCACCAGCATGTACAAGCTGCAGTTCTGGGTACCGGACGGGCGCAGCTACCACGGCGTGATGATCGGCAACGGCCTGGGCCGCGCCGATATCGGCATCGACGCCCAGGACGAGCGCTGGCAACTGCTGGTCAGTGCCCCCGAGGCCTGCGCCGAAGACTGCCGGCAGTTGGTGTACCTGGCCCGGCAGATCCAGGTTGGCCTGGGGCGCGACGCCAGCCGCGCCAGCCATGCCCTGGCCTCGGCCCGGCCGTTGGAGGGCGATTACCAAGGCGTGCTCGACCGCGAGTACCCGCAGCTGCAGCGCTATCCGCTGGACGCCGAGCGTTACCGGCAAAAGGTGAGTGAACCGGGGCCGCAACTGTGGATCGTCGACCCCCACGGCAACCTGGTGCTGCGCTACGACGCCAAGGTCAACGGCAAGCAAGTGCTGGACGATCTGCGCCACCTGCTCAAGCTGTCCAACATCGGCTAG,MAAATSPLHAPEGRKARGRLQLLLILFVVLGPMILATSMYKLQFWVPDGRSYHGVMIGNGLGRADIGIDAQDERWQLLVSAPEACAEDCRQLVYLARQIQVGLGRDASRASHALASARPLEGDYQGVLDREYPQLQRYPLDAERYRQKVSEPGPQLWIVDPHGNLVLRYDAKVNGKQVLDDLRHLLKLSNIG,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 4 : Homologs of previously reported genes of unknown function ;",,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_008027,Chromosome,PSEEN0063,YP_605874,104779376,Protein,60844,61917,,,cytochrome oxidase assembly protein,,Class 3,ATGGCCAGACCCGGATTCCGCCTCGCTGTGTTCGCCACCCTGTTGGCGTTGCTGGTCGTGCTGCTCGGTGCCTATACCCGCCTGACCCACGCTGGCCTCGGCTGCCCGGACTGGCCGGGCTGCTACGGCTTCATCAGCGTGCCCAAGACCGATGCGCAGCTGGCCCATGCCGAGCTGCACTTCCCCGAGCACCCGGTCGAGGAAGCCAAGGGTTGGGCGGAGATGGTCCATCGCTATTTCGCCGGGACCCTGGCGATGGTGATCGCCCTGCTCGCCTTCCACGCCGTGCGCCGGCATGCCCGCGATGGCCAGCCTTATCGCTTGCCGCTGCTATTGCTGGGGGTCGTGCTGGCCCAGGCGGCGTTCGGCATGTGGACGGTGACCTTGAAACTCTGGCCCCAGGTAGTCACGGCGCACTTGCTCGGGGGCTTCACCACGGTCAGCTTGCTTTTCCTGCTATCCCTGCGTCTATCCCGGGCCTTTGCGCCCTTGCCGAAACTGCCCCTGAGCCTACGCCGTATCGCTGCGTTGGCACTGCTGGTGGTGATCGGCCAGATCGCCTTGGGCGGCTGGGTCAGTTCCAACTATGCGGCGGTGGCCTGTATCGACTTGCCCACCTGCCACGGTCAATGGTGGCCGGCGGCGGACTTCAGCAACGGTTTCCACCTCACCCAGCACGTCGGCCCCAACTACCTGGGCGGGCAGCTGGATAGCGATGCGCGCACGGCAATCCATATCAGCCATCGTCTCGGTGCCTTGTTGGTCACGCTGGTGCTGCTGATGCTCAGCTGGAAGCTGCATCGCAATGGCCTGACCGGCTTGGCGCGCCTGGTACTGCTGGCGCTGGCGCTGCAAATCGGGCTGGGCGTGAGCAACGTGTTGCTGCACCTGCCGCTGGCCGTGGCCGTGGCCCACAACGCTGGCGGCATCCTGCTGCTGCTGAGCATGGTGCTGGTGAACTACCGCATCCGCGTGGCCGACAAAGTACGTGTCGGTCTTGGCTGGCGTCTCACCCCGGTGAGCAACGTCGGGCTCTCCCATCACATGAGGAATGATTCGTGGCGACGCTTCTGA,MARPGFRLAVFATLLALLVVLLGAYTRLTHAGLGCPDWPGCYGFISVPKTDAQLAHAELHFPEHPVEEAKGWAEMVHRYFAGTLAMVIALLAFHAVRRHARDGQPYRLPLLLLGVVLAQAAFGMWTVTLKLWPQVVTAHLLGGFTTVSLLFLLSLRLSRAFAPLPKLPLSLRRIAALALLVVIGQIALGGWVSSNYAAVACIDLPTCHGQWWPAADFSNGFHLTQHVGPNYLGGQLDSDARTAIHISHRLGALLVTLVLLMLSWKLHRNGLTGLARLVLLALALQIGLGVSNVLLHLPLAVAVAHNAGGILLLLSMVLVNYRIRVADKVRVGLGWRLTPVSNVGLSHHMRNDSWRRF,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.6.15.1 : Cytochromes ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ;",,,,,,,,Cytoplasmic Membrane,Class 3,,,,,,,,,,PF02628,"COX15-CtaA, Cytochrome oxidase assembly protein. This is a family of integral membrane proteins. CtaA is required for cytochrome aa3 oxidase assembly in Bacillus subtilis. COX15 is required for cytochrome c oxidase assembly in yeast..",COG1612,"CtaA, Uncharacterized protein required for cytochrome oxidase assembly [Posttranslational modification, protein turnover, chaperones].","Posttranslational modification, protein turnover, chaperones"
NC_008027,Chromosome,PSEEN0064,YP_605875,104779377,Protein,61902,62801,,,protoheme IX farnesyltransferase,,Class 3,GTGGCGACGCTTCTGAGCACGGAACGCCCGCGCACCGGCTGGCGCGACTACATGGAGTTGACCAAGCCCAAGGTGGTGGTGCTGATGCTGATCACCTCGCTGGTGGGCATGTTTCTCGCCACCCGCGCCGGCGTCGCCTGGAGCGTGCTGCTGTTCGGCAACCTGGGGATCGGCCTGTGCGCCGGGGGCGCGGCGGTGGTCAACCACGTGGTGGACCGGCGCATCGACGCGCTGATGGCCCGCACCCACAAACGCCCGCTAGCCCAGGGCCGGGTCGCGCCGCTACCGGCCCTGGCCTTCGCCTTGCTGTTGGCAGTGATGGGCCTGGCATTGCTGCTGGCGTTCACCAATACCCTCACCGCCTGGCTGACCCTGGCTTCGCTATTGGGTTATGCGGTGCTCTACACCGGCTTTCTCAAGCGCGCGACGCCGCAGAACATCGTGATCGGCGGCCTGGCCGGCGCGGCCCCGCCGTTGCTGGGTTGGGTGGCGGTGAGCGGGCATGTGAGCGCCGAGCCGCTGTTGCTGGTGCTGATCATTTTCGCCTGGACCCCGCCGCACTTCTGGGCCCTGGCCATCCACCGCAAGGCCGAGTACGAAAAAGCCGATATTCCCATGCTGCCGGTGACCCATGGCGAGCATTACACCGCGCTGCATATCCTGCTCTACACCCTGATTCTGCTGGCTGTCAGCCTGTTGCCCTATGCCATCCACATGAGTGGCCCGCTTTACCTGGCCTGTGCCCTGGCCCTGGGCCTGCGCTTCCTGCATTGGGCCTGGGTGTTGTACCGTGGCACCCGGCCGCACGCGGCGATCAAGACGTTCAAGTACTCTATCGGCTATCTGTTCGCCCTGTTCATCGCGCTGCTCGTTGACCACTACCTGTTGCTGAACCTATGA,MATLLSTERPRTGWRDYMELTKPKVVVLMLITSLVGMFLATRAGVAWSVLLFGNLGIGLCAGGAAVVNHVVDRRIDALMARTHKRPLAQGRVAPLPALAFALLLAVMGLALLLAFTNTLTAWLTLASLLGYAVLYTGFLKRATPQNIVIGGLAGAAPPLLGWVAVSGHVSAEPLLLVLIIFAWTPPHFWALAIHRKAEYEKADIPMLPVTHGEHYTALHILLYTLILLAVSLLPYAIHMSGPLYLACALALGLRFLHWAWVLYRGTRPHAAIKTFKYSIGYLFALFIALLVDHYLLLNL,"inference: non-experimental evidence, no additional details recorded ;inference: ab initio prediction:AMIGene:2.0 ;function prediction: 1.5.3.12 : Heme, porphyrin ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ;",,,,,,2.5.1.- ;,,Cytoplasmic Membrane,Class 3,GO:0008495 ;,TIGR01473,cyoE_ctaB,protoheme IX farnesyltransferase,equivalog,5.90E-143,2.5.1.-,"Biosynthesis of cofactors, prosthetic groups, and carriers","Heme, porphyrin, and cobalamin",PF01040,"UbiA, UbiA prenyltransferase family..",COG0109,"CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) [Posttranslational modification, protein turnover, chaperones].","Posttranslational modification, protein turnover, chaperones"
NC_008027,Chromosome,PSEEN0065,YP_605876,104779378,Protein,62798,63430,,,"electron transport protein, Sco1/SenC family",,Class 3,ATGACCCGAACCCAGAAAACCGTCTTCATCCTCGTTGCCCTGGTCGCGCTGATCATGGGCCTGACCGTCAACAAGGTGCTCAGCGACCGCGGTCAGCTGAACCCCACCGAACTGATCGACGCCGGCATCATCCTGTTGCCACAAAGCCGCACGGTGCCAGACGTGAAGATGACCGACCAGAACGGTCAGCCCGTCGCGCTGGACCAGCTCAAGGGCAAATGGTCGTTACTGTTCTTCGGCTACACCTACTGCCCGGACATCTGCCCGACCACCCTCGCCCAGCTTCGCCAGGTGAAGAGCGAGCTGCCCAAGGAGGCCATCGAGCGCCTGCAGGTGGTGTTGGTGAGCGTGGACCCGCACCGTGACACGCCGAACCAGCTCAAGCAGTACCTGGGCTATTTCGACAAGGATTTCGTCGGGGTGGCGGGGTCGATCGAGGACACGCAGAAGCTGGCCAATGCCCTGAGCATTCCGTTCATTCCGGCTGATACCAGCAAGCCGGGGTATACCGTGGACCACAGCGGCAACCTGGCGGTGGTCGGGCCGGATGGGCGCCAGCGCGGGTTCATTCGTGCGCCGTTCAACAACCAGAAGCTGGTGGCGCAGTTGCCGGGGCTGGTCGAACGGGATTGA,MTRTQKTVFILVALVALIMGLTVNKVLSDRGQLNPTELIDAGIILLPQSRTVPDVKMTDQNGQPVALDQLKGKWSLLFFGYTYCPDICPTTLAQLRQVKSELPKEAIERLQVVLVSVDPHRDTPNQLKQYLGYFDKDFVGVAGSIEDTQKLANALSIPFIPADTSKPGYTVDHSGNLAVVGPDGRQRGFIRAPFNNQKLVAQLPGLVERD,"inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.4.3 : Electron carrier ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ;",,,,,,,,Unknown,Class 3,,,,,,,,,,PF02630PF00578,"SCO1-SenC, SCO1/SenC. This family is involved in biogenesis of respiratory and photosynthetic systems. SCO1 is required for a post-translational step in the accumulation of subunits COXI and COXII of cytochrome c oxidase. SenC is required for optimal cytochrome c oxidase activity and maximal induction of genes encoding the light-harvesting and reaction centre complexes of R. capsulatus..AhpC-TSA, AhpC/TSA family. This family contains proteins related to alkyl hydroperoxide reductase (AhpC) and thiol specific antioxidant (TSA)..",COG1999,"COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems [General function prediction only].",General function prediction only
NC_008027,Chromosome,PSEEN0066,YP_605877,104779379,Protein,64355,63585,,,D-methionine-binding lipoprotein MetQ,,Class 3,ATGAAGAAGCTGCTTGCTGTTGTCGCCGCCGTCGCGGCCTTCTCGGCCCACGCCGAAACCCTGACCGTCGCCGCCACCCCGGTGCCGCACGCCGAGATCCTCAAGTTCGTCCAGCCACAGCTGGCCAAAGAGGGCGTGGAACTGAAGGTCAAGGAATTCACCGACTACATCCAGCCGAACGTGCAGGTTGCGGAAAAACGCCTGGACGCCAACTTCTTCCAGCACCAGCCGTACCTGGACGAGTTCAACAAGGCCAAGGGCACCCAGCTGGTCAGCGTCACCGGCGTGCACCTGGAGCCGCTGGGCGCCTACTCCACCAAGCTGAAGAAGCTCGACGAGCTGGCTGACGGCGCCACCGTGGTCATCCCCAACGACGCCACCAACGGCGGCCGCGCCCTGCTGCTGCTGGACAAGGCCGGCGTGATCAAGCTCAAGGACAACAAGAACATCCTGTCGACCGTGAAGGACATCACCGGCAACGACAAGAAGTTGAAGTTCCGCGAGCTGGAAGCGGCCACCATCCCGCGTGTGCTGACCCAGGTCGACCTGGCGCTGATCAACACCAACTATGCGCTGGAAGCCAAGCTGAACCCGGAGAAGGACGCGCTGGTCATCGAAGGCAGCGACTCGCCTTACGTGAACATCCTGGTTGCCCGCCCGGACAACAAGGACGCGGATGCCATGAAGAAGCTGGCCGCGGCCCTGCACTCGCCTGAGGTGAAGCAGTTCATCACCGAGAAG