Replicon Accession Replicon Name Locus tag RefSeq Accession RefSeq GI (protein ID) Category Start Stop Gene name altGeneName Product name altProteinName Product Name Rating Nucleotide Sequence Amino Acid Sequence comment evidenceReferences genomicContext homology structureFeature pathway ecNumber functionClass localization localizationClassConfidence geneOntology tigrfamAccession tigrfamName tigrfamFunction tigrfamIsologyType tigrfamSignificance tigrfamEcNumber tigrfamRole tigrfamSubRole pfam pfamDescription cog cogDescription COG_Category primaryFunctionClassID NC_008027 Chromosome PSEEN0001 YP_605815 104779317 Protein 552 2078 dnaA Chromosomal replication initiator protein DnaA Class 2 GTGTCAGTGGAACTTTGGCAGCAGTGCGTGGAGCTTCTGCGCGATGAACTGCCTGCCCAGCAATTCAACACCTGGATCCGTCCGCTACAGGTCGAAGCCGAAGGCGACGAGTTGCGCGTCTATGCGCCCAACCGCTTCGTGCTCGACTGGGTTAATGAAAAGTACCTGGGTCGTCTGCTCGAGCTGCTGGGCGAACACGGCAATGGCCTTGCGCCCGCTCTGTCTCTATTAATAGGCAGCCGTCGCAGCTCGGCACCGCGCGCCGCCCCCAACGCGCCAGTCAGCGCAGCGGTCGCCGCGACCATGGCGCAGCAAACACAACAGGCTGCGCAGGTCGTGGTGCCGAGCGAACCCATCGTCGTGCCGGTGGCTGAGCCTGTGCTGAGTGAGGTAGAAGAGCCGTCCAGCCGGGACAGCTTCGACAGCATGAGCGATTCGGGTTCGGTGCCAGCGGCCAGCGGCCGTACCGAACAGCGCACCGTGCAGGTCGAAGGGGCGCTCAAGCACACCAGCTACCTGAACCGCACCTTCACCTTCGAAACCTTCGTGGAAGGCAAGTCGAACCAACTGGCGCGCGCCGCCGCCTGGCAGGTCGCCGACAACCCCAAGCACGGCTACAACCCGCTCTTCCTTTATGGCGGTGTCGGCTTGGGTAAGACGCACTTGATGCACGCTGTGGGTAACCACCTGCTCAAGAAGAACCCGAATGCCAAGGTGGTCTACCTGCATTCCGAGCGTTTCGTCGCCGACATGGTCAAGGCGCTGCAACTCAACGCCATCAACGAGTTCAAGCGCTTCTACCGTTCGGTCGACGCGCTGCTCATCGATGACATCCAGTTCTTCGCCCGCAAGGAGCGTTCGCAGGAGGAGTTTTTCCACACCTTCAACGCCCTGCTCGAAGGTGGCCAGCAGGTGATCCTCACCAGCGACCGCTACCCGAAGGAAATCGAAGGCCTGGAAGAGCGCCTGAAGTCGCGTTTCGGCTGGGGGCTGACGGTGGCCGTCGAGCCGCCGGAGCTGGAAACCCGCGTGGCGATCTTGATGAAGAAGGCCGACCAGGCCAAGGTCGAGCTGCCGCATGACGCCGCGTTCTTCATCGCCCAGCGCATCCGCTCCAACGTGCGTGAACTCGAAGGTGCCCTGAAGCGGGTAATTGCCCACTCGCACTTCATGGGCCGCGATATCACCATCGAGCTGATCCGTGAATCGCTCAAGGATCTGCTGGCGCTGCAGGACAAGCTGGTCAGTGTGGATAACATCCAGCGCACCGTGGCCGAGTACTACAAGATCAAGATCTCCGATCTGCTGTCCAAGCGCCGGTCGCGCTCCGTTGCGCGTCCACGCCAGGTGGCCATGGCGTTGTCGAAAGAGCTGACCAACCACAGTCTGCCGGAGATCGGCGACATGTTTGGCGGCCGCGACCACACCACCGTGCTGCACGCTTGCCGCAAGATCAACGAATTGAAGGAATCCGACGCGGACATCCGCGAGGACTACAAGAACCTGCTGCGCACGCTGACGACCTGA MSVELWQQCVELLRDELPAQQFNTWIRPLQVEAEGDELRVYAPNRFVLDWVNEKYLGRLLELLGEHGNGLAPALSLLIGSRRSSAPRAAPNAPVSAAVAATMAQQTQQAAQVVVPSEPIVVPVAEPVLSEVEEPSSRDSFDSMSDSGSVPAASGRTEQRTVQVEGALKHTSYLNRTFTFETFVEGKSNQLARAAAWQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHTFNALLEGGQQVILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVELPHDAAFFIAQRIRSNVRELEGALKRVIAHSHFMGRDITIELIRESLKDLLALQDKLVSVDNIQRTVAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDMFGGRDHTTVLHACRKINELKESDADIREDYKNLLRTLTT inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 5.2 : Cell cycle physiology ;function prediction: 3.1.2 : Transcriptional level ;function prediction: 2.1.1 : DNA replication ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ; 3.6.-.- ; Cytoplasmic Class 3 GO:0006275 ; TIGR00362 DnaA chromosomal replication initiator protein DnaA equivalog 1.2e-170 DNA metabolism DNA replication, recombination, and repair PF00308PF08299 Bac_DnaA, Bacterial dnaA protein..Bac_DnaA_C, Bacterial dnaA protein helix-turn-helix domain.. COG0593 DnaA, ATPase involved in DNA replication initiation [DNA replication, recombination, and repair]. DNA replication, recombination, and repair NC_008027 Chromosome PSEEN0002 YP_605816 104779318 Protein 2119 3222 dnaN DNA polymerase III, beta chain Class 3 ATGCATTTCACCATTCAACGCGAAGCCCTGTTGAAACCCCTGCAACTGGTCGCCGGCGTCGTCGAGCGCCGCCAGACCTTGCCGGTCCTGTCCAACGTCCTGCTGGTCGTGCAAGGCCAGCAGCTGTCGTTGACCGGTACCGACCTGGAAGTCGAACTGGTTGGCCGCGTTCAACTGGAAGAGCCTGCGGAGCCGGGCGAGATTACTGTCCCGGCGCGCAAGCTGATGGACATCTGCAAGAGCCTGCCCAGCGATGCGCTGATCGATATCAAGGTCGATGAGCAGAAGTTGCTGGTCAAGGCCGGTCGCAGCCGTTTCACCTTGTCCACCCTGCCGGCCAATGACTTCCCGACTGTCGAAGAAGGTCCTGGCTCGCTGACCTGCCAGCTGGAGCAGAGCAAACTGCGCCGCCTGATCGAGCGCACCAGCTTCGCCATGGCCCAGCAAGACGTGCGCTACTACCTCAACGGCATGTTGCTGGAAGTGTCCCCCGGCACCCTGCGTGCCGTGGCCACCGACGGTCACCGTTTGGCGTTGTGTGCCATGCAGGCACCGATCGACCAAGCTGATCGCCACCAGGTCATCGTGCCACGCAAAGGTATCCTCGAGCTGGCGCGCCTGCTCACCGATCCGGAAGGTACAGTCAGCATCGTCCTGGGCCAGCACCACATTCGCGCCACCACCGGTGAGTTCACCTTCACCTCCAAGCTGGTCGATGGCAAATTCCCGGACTACGAGCGCGTCCTGCCCAAGGGCGGTGACAAGCTGGTGATCGGCGATCGTCAGGCGCTTCGTGAAGCGTTTAGCCGTACCGCGATCCTGTCCAACGAGAAGTACCGCGGTATCCGCCTGCAACTGGCCGCCGGCCAGCTGAAAATCCAGGCCAACAACCCGGAGCAGGAAGAAGCGGAAGAAGAAATCAGCGTCGACTACAACGGCAGTTCGCTGGAGATTGGTTTCAACGTCAGCTACCTGCTGGACGTGCTGGGCGTCATGACCACTGAACAGGTTCGCCTGATTCTGTCGGATTCCAACAGCAGTGCCCTGCTGCAGGAAGCTGGCAATGACGACTCGTCCTACGTTGTCATGCCGATGCGTCTGTAA MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVQGQQLSLTGTDLEVELVGRVQLEEPAEPGEITVPARKLMDICKSLPSDALIDIKVDEQKLLVKAGRSRFTLSTLPANDFPTVEEGPGSLTCQLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSPGTLRAVATDGHRLALCAMQAPIDQADRHQVIVPRKGILELARLLTDPEGTVSIVLGQHHIRATTGEFTFTSKLVDGKFPDYERVLPKGGDKLVIGDRQALREAFSRTAILSNEKYRGIRLQLAAGQLKIQANNPEQEEAEEEISVDYNGSSLEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALLQEAGNDDSSYVVMPMRL inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 2.1.1 : DNA replication ;Evidence 2b : Function of strongly homologous gene ; 2.7.7.7 ; Cytoplasmic Class 3 GO:0009360 ; TIGR00663 dnan DNA polymerase III, beta subunit equivalog 4.3e-116 2.7.7.7 DNA metabolism DNA replication, recombination, and repair PF00712PF02767PF02768 DNA_pol3_beta, DNA polymerase III beta subunit, N-terminal domain. A dimer of the beta subunit of DNA polymerase beta forms a ring which encircles duplex DNA. Each monomer contains three domains of identical topology and DNA clamp fold..DNA_pol3_beta_2, DNA polymerase III beta subunit, central domain. A dimer of the beta subunit of DNA polymerase beta forms a ring which encircles duplex DNA. Each monomer contains three domains of identical topology and DNA clamp fold..DNA_pol3_beta_3, DNA polymerase III beta subunit, C-terminal domain. A dimer of the beta subunit of DNA polymerase beta forms a ring which encircles duplex DNA. Each monomer contains three domains of identical topology and DNA clamp fold.. COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) [DNA replication, recombination, and repair]. DNA replication, recombination, and repair NC_008027 Chromosome PSEEN0003 YP_605817 104779319 Protein 3238 4341 recF DNA replication, recombinaison and repair protein Class 3 ATGTCCCTTCGACGTCTTTCGGTCACCGCGGTGCGCAACTTGCACCCGGTGACCCTCTCACCCTCCCCCCGCATCAACATCCTTTACGGCGCCAATGGCAGCGGCAAGACCAGCGTGCTCGAAGCCGTGCACCTGCTGGGTCTTGCTCGATCGTTTCGTAGCACCCGCTTGAACCCGGTCATCCAGTACGAGCAGCAAACCTGCACGGTGTTTGGCCAGGTCGAGTTGGCTGAGGGTGGTACCAGCAATCTCGGGGTATCCCGGGAGCGTCAGGGGGAGTTCACTATCCGCATCGACGGGCAGAATGCGCGCAGCGCCGCGCAGCTGGCCGAAATGCTGCCTCTGCAGTTGATCAACCCGGACAGTTTCCGCCTGCTCGAGGGCGCCCCCAAAGTACGCCGGCAGTTCCTCGATTGGGGCGTGTTCCACGTGGAACCACGTTTCATGGCAACCTGGCAGCGCCTGCAGAAGGCCCTGCGGCAGCGGAACTCATGGCTGCGGCATGGTACACTTGACGCCGTTTCGCAAGCCGCCTGGGATCGGGAGTTATGCCTCGCCAGTGCGGAGATAGATGAATACCGTCGCAATTACATCAAGGCCTTGAAGCCTGTCTTCGAGCGAACCCTGAGCGAGCTGGTCGAACTGGACGGGCTGACCCTGAGCTACTACCGAGGCTGGGACAAGGACCGGGAACTTAACGAAGTCCTGGCGACCTCTCTCCTCCGTGACCAGCAGATGGGCCATACCCAAGCCGGGCCACAGCGTGCTGACCTGCGCCTTCGATTGGGTGCGAACAACGCGGCTGACATTCTCTCGCGGGGCCAGCAGAAGCTGGTGGTGTGCGCCCTGCGGATCGCCCAAGGGCACCTGGTCAGCCAGGTCCGCCGCGGTCAGTGTATTTATCTGGTGGATGACTTGCCGTCCGAGTTGGACGAACAGCATCGCCGCGCCCTGTGCCGCTTGCTTGAAGAATTGAACTGCCAGGTGTTCATCACCTGTGTAGACCACGAATTTCTGAGGGAAGGCTGGCAGACGGAAACGCCAGTCGCTTTGTTCCACGTGGAACAGGGCCGTATCACCCAGACCCACGACCATCGGGAGTGA MSLRRLSVTAVRNLHPVTLSPSPRINILYGANGSGKTSVLEAVHLLGLARSFRSTRLNPVIQYEQQTCTVFGQVELAEGGTSNLGVSRERQGEFTIRIDGQNARSAAQLAEMLPLQLINPDSFRLLEGAPKVRRQFLDWGVFHVEPRFMATWQRLQKALRQRNSWLRHGTLDAVSQAAWDRELCLASAEIDEYRRNYIKALKPVFERTLSELVELDGLTLSYYRGWDKDRELNEVLATSLLRDQQMGHTQAGPQRADLRLRLGANNAADILSRGQQKLVVCALRIAQGHLVSQVRRGQCIYLVDDLPSELDEQHRRALCRLLEELNCQVFITCVDHEFLREGWQTETPVALFHVEQGRITQTHDHRE inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 2.1.3 : DNA recombination ;function prediction: 5.8 : SOS response ;Evidence 2b : Function of strongly homologous gene ; 3.6.-.- ; Cytoplasmic Class 3 GO:0009432 ; TIGR00611 recf DNA replication and repair protein RecF subfamily 6.1e-138 DNA metabolism DNA replication, recombination, and repair PF02463 SMC_N, RecF/RecN/SMC N terminal domain. This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.. COG1195 RecF, Recombinational DNA repair ATPase (RecF pathway) [DNA replication, recombination, and repair]. DNA replication, recombination, and repair NC_008027 Chromosome PSEEN0004 YP_605818 104779320 Protein 4346 6766 gyrB DNA gyrase, subunit B Class 2 ATGAGCGAAAATCAAACGTACGACTCCTCCAGCATCAAGGTGCTGAAAGGGCTGGATGCCGTACGCAAGCGTCCCGGCATGTACATTGGCGACACCGATGACGGCAGCGGCCTGCACCACATGGTGTTCGAGGTGGTCGACAACTCGATCGACGAAGCCCTGGCCGGGCACTGCGATGACATCACCGTCATCATTCACACCGACGAATCCATCAGCGTCCGTGACAACGGTCGTGGCATTCCGGTCGACGTGCATAAAGAAGAAGGCGTATCCGCAGCCGAGGTCATCATGACCGTGCTGCACGCCGGCGGTAAGTTCGACGACAACTCCTACAAGGTTTCCGGCGGTCTGCACGGTGTAGGTGTTTCGGTGGTAAACGCTCTATCCGAAAAGCTGGTGCTCACCGTTCGCCGCAGCGGCAAGATCTGGGAACAGACGTATGTCCACGGTGTTCCACAGGCACCGATGGCCGTGGTGGGTGAAAGCGAAACCACCGGTACCCACATTCACTTCAAGCCTTCGGCTGAAACCTTCAAGAACATTCACTTCAGCTGGGATATCCTCGCCAAGCGTATCCGCGAGCTGTCGTTCCTGAACTCCGGTGTCGGTATCCTGCTGAAGGATGAGCGCAGCGGCAAGGAAGAGTTCTTCAAGTATGAAGGCGGCCTGCGTGCTTTCGTTGAATACCTGAACACCAACAAGACCCCGGTCAACTCCCAGGTCTTCCACTTCAACGTCCAGCGTGACGATGGCGTGGGTGTCGAAGTCGCCCTGCAATGGAACGACAGCTTCAACGAAAACCTGCTGTGCTTCACCAACAACATTCCCCAGCGCGACGGTGGTACTCACCTGGTCGGCTTCCGCTCTTCGCTCACCCGTAGCCTGAACAGCTACATCGAGCAGGAAGGCCTGGCGAAGAAGAACAAGGTTGCTACCACCGGTGACGACGCCCGTGAAGGCCTGACCGCGATCATTTCGGTCAAGGTGCCGGACCCCAAGTTCAGCTCGCAGACCAAGGACAAGCTGGTTTCCTCGGAGGTGAAGACCGCCGTGGAACAGGAGATGAACAAGTACTTCGCCGACTTCCTGTTGGAGAACCCCAACGAAGCCAAGGCCGTGGTCGGCAAGATGATCGACGCCGCCCGTGCCCGTGAAGCGGCACGTAAAGCGCGTGAGATGACCCGCCGTAAAGGTGCCCTGGACATCGCCGGCCTGCCGGGCAAACTGGCCGACTGCCAGGAGAAGGACCCTGCCCTTTCCGAACTGTACCTGGTGGAGGGTGACTCCGCAGGTGGTTCGGCCAAGCAAGGTCGCAACCGCCGCACTCAGGCAATCCTGCCGCTCAAGGGCAAGATCCTCAACGTCGAGAAGGCACGCTTTGACAAGATGATCTCTTCGCAGGAGGTCGGCACGCTGATCACCGCGCTGGGCTGTGGTATCGGCCGCGAAGAGTACAACATCGACAAGCTGCGTTATCACAACATCATCATCATGACCGATGCTGACGTCGACGGTTCGCACATCCGTACCCTGCTGCTGACGTTCTTCTTCCGCCAGTTGCCGGAGCTGGTCGAGCGTGGCTACATCTATATCGCCCAGCCGCCGCTGTACAAGGTGAAAAAGGGCAAGCAGGAGCAGTACATCAAGGACGACGAGGCCATGGAAGAATACATGACCCAGTCGGCCCTGGAAGATGCCAGCCTGCACCTGGACGAGTCGGCGCCAGCCGTTTCGGGCGTGCAGCTCGAGGCGTTGGTGAACGAATTCCGCACCGTGATGAAGACCCTGAAGCGTCTGTCGCGTCTGTACCCGGAAGAGCTCACCGAACACTTCATCTACCTGCCGGAAGTCACCCTGGAGCAACTGGCCAACCATGCCACCATGCAGGGCTGGCTGAGCAAGTTCCAGGAGCGCCTGAACAACAGCCAGAAGTCCGGCCTCAGCTATGTGGCCAGCCTGCGCGAAGACAAGGAGCGCAACATCTGGCTGCCTGAAGTGGAAATCACTTCCCACGGCCTGGCCAGCTACGTCACCTTCAACCGTGAGTTCTTCGGTAGCAACGACTACCGCTCGGTGGTCAACCTGGGCGCCAAGCTCGGTACGTTGCTCGGCGAGGGTGCCTACGTTCAGCGTGGCGAGCGCCGCAAAGCGGTCACCGAGTTCAAGGAAGGCCTGGATTGGCTGATGAACGAAAGCACCAAGCGCCACACCATCCAGCGATATAAAGGGCTGGGTGAGATGAACCCGGACCAGCTGTGGGAAACCACCATGGACCCGACCGTGCGCCGCATGCTCAAGGTGACTATCGAGGACGCAATCGCTGCCGACCAGCTGTTCAACACCCTGATGGGTGATGCAGTCGAGCCGCGCCGTGACTTCATTGAAAGCAACGCGTTGTCGGTGTCCAACCTGGACTTCTGA MSENQTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDITVIIHTDESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSEKLVLTVRRSGKIWEQTYVHGVPQAPMAVVGESETTGTHIHFKPSAETFKNIHFSWDILAKRIRELSFLNSGVGILLKDERSGKEEFFKYEGGLRAFVEYLNTNKTPVNSQVFHFNVQRDDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSSLTRSLNSYIEQEGLAKKNKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMNKYFADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSELYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELVERGYIYIAQPPLYKVKKGKQEQYIKDDEAMEEYMTQSALEDASLHLDESAPAVSGVQLEALVNEFRTVMKTLKRLSRLYPEELTEHFIYLPEVTLEQLANHATMQGWLSKFQERLNNSQKSGLSYVASLREDKERNIWLPEVEITSHGLASYVTFNREFFGSNDYRSVVNLGAKLGTLLGEGAYVQRGERRKAVTEFKEGLDWLMNESTKRHTIQRYKGLGEMNPDQLWETTMDPTVRRMLKVTIEDAIAADQLFNTLMGDAVEPRRDFIESNALSVSNLDF inference: ab initio prediction:AMIGene:2.0 ;function prediction: 3.1.1.1 : DNA bending, supercoiling, inversion ;inference: non-experimental evidence, no additional details recorded ;function prediction: 2.1 : DNA related ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ; 5.99.1.3 ; Periplasmic Class 3 GO:0009387 ; TIGR01059 gyrB DNA gyrase, B subunit equivalog 0 5.99.1.3 DNA metabolism DNA replication, recombination, and repair PF00204PF00986PF02518 DNA_gyraseB, DNA gyrase B. This family represents the second domain of DNA gyrase B which has a ribosomal S5 domain 2-like fold. This family is structurally related to pfam01119..DNA_gyraseB_C, DNA gyrase B subunit, carboxyl terminus. The amino terminus of eukaryotic and prokaryotic DNA topoisomerase II are similar, but they have a different carboxyl terminus. The amino-terminal portion of the DNA gyrase B protein is thought to catalyse the ATP-dependent super-coiling of DNA. See pfam00204. The carboxyl-terminal end supports the complexation with the DNA gyrase A protein and the ATP-independent relaxation. This family also contains Topoisomerase IV. This is a bacterial enzyme that is closely related to DNA gyrase,..HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. This family represents the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90.. COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair]. DNA replication, recombination, and repair NC_008027 Chromosome PSEEN0005 YP_605819 104779321 Protein 8141 6840 sigma-54 dependent transcriptional regulator Class 3 ATGCTAGCCGCTTCCCATCCTGCGATCTTCGCGCTGGTGTCCTACCTCGAACACGATGTGCTGCCCAGCATCGTGCTGGATACTGACTACAACATCCTGGCAGCCAACGCGGCGTACCGTCGCCAGTTTGGCACCGAGGAGCACGCGCCCATCGGCGAAAAGTGCCATCGAGTCTCGCACCACTATGCCGTCCCTTGCGACCAGGCCGGGGAACATTGTCCGCTGCGCAAGTCACTGGACAGCAAGGTGCCCGAGCGCGTTCTCCACATCCATCACACCCCACGCGGGCCTGAACATGTGGATGTGGAACTGCGCCCGATCCTCGATGACGAGGGTAGGGTAGTAGCCTTCGTCGAGCGCCTGACCAGCGTCACCCTGGCATCGGCTCAACCTCAACAGCAAGGGCTGGTTGGCCGAGCACCCGCGTTCAAGGCCGCCGTGGCCAGTTTGCAGCGCGCGGCGCCTGCACAGATTCCGGTATTGCTTCAGGGTGAGTCCGGCACTGGCAAGGAACTGTTCGCCCGTGCCTTGCACCTGGGTAGCCCACGCGCCAATGGCCCCCTGGTGGTGGTGGACTGCACCGGGTTGACCGAGTCGTTGTTCGAGAGTGAATTGTTCGGCTATGAGAAGGGCGCCTTCACCGGCGCGACTCAACGCAAGATCGGCCTGGCCGAAGCCGCTCACGGTGGCACCCTGTTCCTCGATGAGATCGGTGAGGTACCGCTGGCCATGCAGGTAAAGCTGCTGCGCCTGATCGAGTCCGGCAGCTTCCGCCCGGTCGGCAGCACACGCACGGTCCACTCAGATTTTCGCCTGGTCTCGGCCACGCACAAACCACTGAAAGAGATGGCCACTGAAGGGACGTTCCGCGAAGACCTCTATTACCGCATCAGTGGATTCCCGATCCGCTTGCCATCACTGCGCGAACGGGTCGAAGACTTGCCACTGCTCTGTGAAAGTCTGCTGCAACGAATGGCCGGCAAGCAATCGCCAAAAGTTACGGCTGAGGCGCTCGAGCAGCTGAACCTGCACACCTTCCCAGGCAACATCCGTGAACTCAGGAATATTCTGGAACGCGCCCGGCTGTTCACGGATGACGGTCTGATCCGCCCTGAGCATCTTCCAGAAGATATGTACCCGGCCGCAAAGCCGGCATGTTCACGAGGGCGGGGCAGGAATGAAATGGCCGACCTGGCCCATGCCTTGGAAACCTTCAATGGCTCCCGTAGCGAGTTGGCCGATCATCTGGGGATGAGCGAACGCACGTTGTACCGTCGGCTGAAGGCGCTGGGCATTTCATAG MLAASHPAIFALVSYLEHDVLPSIVLDTDYNILAANAAYRRQFGTEEHAPIGEKCHRVSHHYAVPCDQAGEHCPLRKSLDSKVPERVLHIHHTPRGPEHVDVELRPILDDEGRVVAFVERLTSVTLASAQPQQQGLVGRAPAFKAAVASLQRAAPAQIPVLLQGESGTGKELFARALHLGSPRANGPLVVVDCTGLTESLFESELFGYEKGAFTGATQRKIGLAEAAHGGTLFLDEIGEVPLAMQVKLLRLIESGSFRPVGSTRTVHSDFRLVSATHKPLKEMATEGTFREDLYYRISGFPIRLPSLRERVEDLPLLCESLLQRMAGKQSPKVTAEALEQLNLHTFPGNIRELRNILERARLFTDDGLIRPEHLPEDMYPAAKPACSRGRGRNEMADLAHALETFNGSRSELADHLGMSERTLYRRLKALGIS inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 3.1.2 : Transcriptional level ;function prediction: 2.2.2 : Transcription related ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ; Cytoplasmic Class 3 GO:0006808 ; TIGR01818 ntrC nitrogen regulation protein NR(I) equivalog 6.5e-40 Signal transduction Two-component systems PF00158PF08448PF07728PF00004PF02954 Sigma54_activat, Sigma-54 interaction domain..PAS_4, PAS fold. The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs. The PAS fold appears in archaea, eubacteria and eukarya..AAA_5, ATPase family associated with various cellular activities (AAA). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model..AAA, ATPase family associated with various cellular activities (AAA). AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes..HTH_8, Bacterial regulatory protein, Fis family.. COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]. Transcription / Signal transduction mechanisms NC_008027 Chromosome PSEEN0007 YP_605820 104779322 Protein 8388 9272 metallo-beta-lactamase family protein Class 3 ATGATCATCGGCAACAACCTTCACGTTGAAGCGTTCTTCGACAAAGCGACCTGGACCATCAGCTACCTGGTCATGGATGGCGAGACCCGCCAATGCGCGCTGATCGACAGCGTGCTGGACTACGATCCAAAGTCCGGACGTACCTGCACCCATTCGGCGGACCAGATGATTGCCCGCGTCGAGGCGCTGGGTGCCAAGGTGCAATGGCTGCTCGATACCCATGTGCACGCCGACCATCTGTCTGCGGCGGCCTATCTCAAGCAGAAGCTTGGCGGCAGCATCGCCATTGGTGCGCAGATCACCCAGGTGCAGAAAGTCTTCGGGACTTTGTTCAATGCCGAGCCTGGCTTTGCCCGGGACGGCAGCCAGTTTGATGTCCTGTTCGTGGATGAAGAGGGTTTCCGCATCGGCAACCTGCATGCGCGCGCACTGCACACCCCTGGTCATACACCGGCTTGCATGAGCTACATGGTCGAGGACGCAGGCGAGATCGCCGTGTTCGTCGGCGACACCTTGTTCACGCCCGACTATGGCACCGCCCGTTGCGACTTCCCAGGCGCCAGCGCGAGAACCCTGTACCAGTCGATCCGTCGGCTGCTTGCCTTCCCTGACCAGACCCGCCTGTTCATGTGCCATGACTACCTTCCCGGTGGCCGTGAACTGCGCTACGTCACCACCGTGGCCGAGCAACGCGCCGACAACATTCATATCCATGAAGGTGTCAGTGAAGAGAGCTTCGTCGAGATGCGCGAAGCCCGCGACAAGACCCTCGACATGCCGGTGCTGATCCTGCCCTCGGTGCAGATCAACATGCGCAGCGGGCAGTTCCCCGAACCCGAAGCGAACGGTGTGAGCTACCTGAAGATCCCGCTGAACAAGCTGTAA MIIGNNLHVEAFFDKATWTISYLVMDGETRQCALIDSVLDYDPKSGRTCTHSADQMIARVEALGAKVQWLLDTHVHADHLSAAAYLKQKLGGSIAIGAQITQVQKVFGTLFNAEPGFARDGSQFDVLFVDEEGFRIGNLHARALHTPGHTPACMSYMVEDAGEIAVFVGDTLFTPDYGTARCDFPGASARTLYQSIRRLLAFPDQTRLFMCHDYLPGGRELRYVTTVAEQRADNIHIHEGVSEESFVEMREARDKTLDMPVLILPSVQINMRSGQFPEPEANGVSYLKIPLNKL inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 5.6.4 : Drug resistance/sensitivity ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ; Unknown Class 3 PF00753 Lactamase_B, Metallo-beta-lactamase superfamily.. COG0491 GloB, Zn-dependent hydrolases, including glyoxylases [General function prediction only]. General function prediction only NC_008027 Chromosome PSEEN0008 YP_605821 104779323 Protein 9314 10594 hypothetical protein Class 4 ATGCCTGCCTTGCTGTCCCCTGCCGATACCTCCCGTGCCGACCACCATAAGGTGGTGATCGTCGGCGCTGGTGCCGCCGGCATCGCCACCGCCTCCAGCCTGATCGCCCGTGATCCGTCGCTGGATATCGCCTTGATCGACCCCGCCGAAGTCCACTACTACCAGCCCGGCTGGACCATGGTCGGCGCGGGTGTGTTCAAGGCACCAAGCACCGCCCACACCATGGCCGCGACCCTGCCCCGTGGCGTGCGCTGGATCAAGGCGCGGGTCGAAGGTTTCGACCCCCAGGGGCAACTGGTGATGCTTGATGATGGCCGTGCCGTCAGCTATGAACAGCTGGTGGTCTGCCCAGGGCTCAAGCTTGATTGGAATGCCATCGAAGGCTTGAGCGAAACGCTGGGGCGTAACGGCGTCACCTCCAATTATCGCTACGACCTGGCGCCCTACACGTGGCAACTGGTGCAGAAGCTGAAGCACGGACGCGCCCTCTTCACCCAACCACCGATGCCGATCAAGTGCGCGGGAGCACCACAGAAAGCGCTGTACCTGTCCTGCGACTACTGGTTACGCAATGGCCACCTTGGCAATGTCAGGGCCAGCTTCTTCAATGCCGGTGCTGTGCTGTTCGGGGTCGTGGACTATGTCCCGGCCCTGATGAGCTACATCGACAAGTACGCGGTCGACCTCAATTACCAGCATCGCCTGGTGGCTGTGGACGGCCCGAACAAGCGCGCCACCTTCATGCGCACTCTTCCCGATGGCAGCACCGAGACCCGCGTCGAAGCGTTCGACATGCTGCATGTGGTACCGCCGCAAGTGGCGCCGGACTTCATCCGCCAGAGCCCACTGGCCGACGCCGGCGGCTGGGTGGACGTCGACCCGCACACCCTGCGCCATCGCCAGTTCGGCAATGTCCATGCCCTGGGTGACGTGGCCAACACCACCAACGCCAAGACTGCGGCCGCCGCACGCAAGCAGGCGCCGGTGGTGGCCAACAATGTGCTGGTGGCGCTCGGTCGCTTGTCGACCCTGGCGCAGTACGACGGCTACGGCTCATGCCCATTGACGGTGGAGCGCGGCAAGATCGTCCTCGCTGAGTTCACCTACGGGGGCAAGGTGGCGCCGAGCTTCCCGCGCTGGCTGCTCGACGGACGCAAGCCGACCCGCCTCGCCTGGCTGCTCAAGGCGCGGATCCTGCCACCGCTGTACTGGAAGGCGATGCTCAAGGGGCGTGAATGGCTGGCACGGCCGAAACCGCTGGTAGCCGAGGCGCAACAGTGA MPALLSPADTSRADHHKVVIVGAGAAGIATASSLIARDPSLDIALIDPAEVHYYQPGWTMVGAGVFKAPSTAHTMAATLPRGVRWIKARVEGFDPQGQLVMLDDGRAVSYEQLVVCPGLKLDWNAIEGLSETLGRNGVTSNYRYDLAPYTWQLVQKLKHGRALFTQPPMPIKCAGAPQKALYLSCDYWLRNGHLGNVRASFFNAGAVLFGVVDYVPALMSYIDKYAVDLNYQHRLVAVDGPNKRATFMRTLPDGSTETRVEAFDMLHVVPPQVAPDFIRQSPLADAGGWVDVDPHTLRHRQFGNVHALGDVANTTNAKTAAAARKQAPVVANNVLVALGRLSTLAQYDGYGSCPLTVERGKIVLAEFTYGGKVAPSFPRWLLDGRKPTRLAWLLKARILPPLYWKAMLKGREWLARPKPLVAEAQQ inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 4 : Homologs of previously reported genes of unknown function ; Unknown Class 3 PF07992 Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase. This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.. COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only]. General function prediction only NC_008027 Chromosome PSEEN0009 YP_605822 104779324 Protein 10591 11409 hypothetical protein Class 4 GTGATCGAGCATCAATTGCTGGGGGCTGGGCTCGGCGCGATCATTGGGGCGGTACTGGCCCTGACCGGTGCTGGCGGTGGCATCCTCGCGGTGCCGTTGCTGGTCTTCGGGCTTGGGCTGAGCATGGTCGAGGCGGCGCCGATCGGTCTGCTGGCCGTGGGGTTGGCGGCGGCGGTCGGTGGTGTGTTGGGTTTGCGCCAGGGCCTGGTGCGCTACCGGGCGGCCTTGTTCATTGCCGTGATCGGTATCGCTTGCGCACCGTTCGGCCTGATGCTCGCGCACCGTTTGCCCAACGCACCGCTGGCGCTGGTGTTCGCCGGGGTGCTGGTCTATGCCTGCCTGCGCATCTGGCGTAAAGCTACCCGCGAGTTGCGCGGTGAATCGCCCTGCGATGATCGGCAGATCATGCCCTGCGTGCTCAATCCGCTGCAGGGGCGGCTGCGCTGGACCCTGCCCTGCGCCCGGGCTTTGGCGTTCACCGGTATGTTGTCGGGGCTGCTGTCCGGCCTGTTGGGTGTCGGTGGCGGCTTCGTGATCATCCCGGCGTTGAACCGCTACACCAACCTGAACATGAAGAGCATCGTTGCCACCTCGCTGGCGGTGATCGCCCTGGTGTCCACCGGCAGTGTGGTCAGCGCCAGCGTGGCGGGCGTGATGCACTGGCGGGTCGGGGCACCGTTTGCCGTGGGGGCGGTACTGGGCTTGCTGCTGGCGAGGCCACTGGCGGGCAAGCTGGCCGGCCCGCGCCTGCAACAGCTGTTCGCCGTGGTGGGGTGTGGCGCCGCGGTGCTGCTGGCCGGCAAGGCGCTACTCGGCTAG MIEHQLLGAGLGAIIGAVLALTGAGGGILAVPLLVFGLGLSMVEAAPIGLLAVGLAAAVGGVLGLRQGLVRYRAALFIAVIGIACAPFGLMLAHRLPNAPLALVFAGVLVYACLRIWRKATRELRGESPCDDRQIMPCVLNPLQGRLRWTLPCARALAFTGMLSGLLSGLLGVGGGFVIIPALNRYTNLNMKSIVATSLAVIALVSTGSVVSASVAGVMHWRVGAPFAVGAVLGLLLARPLAGKLAGPRLQQLFAVVGCGAAVLLAGKALLG inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 4 : Homologs of previously reported genes of unknown function ; Cytoplasmic Membrane Class 3 PF01925 DUF81, Domain of unknown function DUF81. This integral membrane protein family has no known function. The alignment appears to contain two duplicated modules of three transmembrane helices.. COG0730 COG0730, Predicted permeases [General function prediction only]. General function prediction only NC_008027 Chromosome PSEEN0010 YP_605823 104779325 Protein 12285 11398 transcriptional regulator, LysR family Class 3 ATGTTCGACTGGAACGATCTGCGGTTTTTCCTCGAGTTGCAGCGCAGCGGCCGTCTGCTCACCGCCGCCAAGCGCCTCAACACCACCCACAGCACCGTGGCCCGGCATATCGAGAGCATCGAAAAGCACCTGGGCACCGCGCTGTTCGTCCAGCATGCCCAGGGCTACGAACTCACCCCCTCCGGCCAGGCCCTGCTCAAGCACGCCGAAGCGATGGAAAACGTTGCCCTGCTGGCGCAGGAAGAAATCACCCAGGCCATCACGCCGCTGGGCAAGATTCGCCTGGGGGTGACCGAGGGTATCGGCATCATGTTCTTCACCCCGCGCATGAACGCCTTGTTCCAGCGCTACCCGGGGCTCGAAGTGGAATTGGTGGCCGTGCCGCGCTTCGTCAGCATCCTCAACCGCGAAGCCGAGATCAGCATCCACCTGGAACGCCCCAACGCCGACCTGCTGATCACCCGCAAGCTCACCGACTACCGCCTGGCACTCTACGCCAGCCAAGACTACCTGGACCGCGCACCACCGCTGCAAAGCCGCGAGGACCTGGCCCGGCACAGCTGGATTGGTTACGTCGACGACCTGCTGTTCAGCCAAGAGCTGCTGTTCCTCAACAGCTTCTGCCGAACACCCAACGTGGTGTTCCGCAGCACCAGCGTGATCGCCCAGCAGCACGCCGCCCAGGCCGGGCTGGGTATCGCCGTGCTGCCCAACTACATGGCCCGCCACGACCCGAAGCTGGTGCGCGTGCTGCCCAGCGAGACCATCCAGCGCAGCTATTGGATCTGCACCCGCCGCGAACTGCACAAGTCGGTACGCCTGCGGGTGGTGTGGGACTATCTGCTGGCGCTGTGCGCCGCCGAGCAGGACGAATTGCTAGCCGAGTAG MFDWNDLRFFLELQRSGRLLTAAKRLNTTHSTVARHIESIEKHLGTALFVQHAQGYELTPSGQALLKHAEAMENVALLAQEEITQAITPLGKIRLGVTEGIGIMFFTPRMNALFQRYPGLEVELVAVPRFVSILNREAEISIHLERPNADLLITRKLTDYRLALYASQDYLDRAPPLQSREDLARHSWIGYVDDLLFSQELLFLNSFCRTPNVVFRSTSVIAQQHAAQAGLGIAVLPNYMARHDPKLVRVLPSETIQRSYWICTRRELHKSVRLRVVWDYLLALCAAEQDELLAE inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 3.1.2 : Transcriptional level ;function prediction: 2.2.2 : Transcription related ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ; Cytoplasmic Class 3 PF03466PF00126 LysR_substrate, LysR substrate binding domain. The structure of this domain is known and is similar to the periplasmic binding proteins..HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family.. COG0583 LysR, Transcriptional regulator [Transcription]. Transcription NC_008027 Chromosome PSEEN0012 YP_605824 104779326 Protein 12538 14187 oxidoreductase, GMC family Class 3 ATGCCATCAGCCGATTCTGTCTACGACTACGTGGTCGTGGGTGCCGGGCCCGCCGGGTGCCTGCTGGCCAATCGTTTGTCCGCTGACCCTTCGTGTCGCGTATTGCTGCTCGAGGCGGGTGGTCGTGACAACTATCCCTGGATACACATCCCTGTCGGTTACCTCTACTGCATTGGCAATCCACGCACCGACTGGTGCTTCAAGACCGAGTCCCAACCTGGCCTTAACGGGCGCAGCCTTGGTTATCCACGGGGCAAGGTGCTGGGGGGCTGTTCATCGATCAACGGCATGATCTACATGCGTGGACAGGCCGCCGACTACGACCGCTGGGCCGAGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGCTGCCGTTGTTCAAGGCCAGCGAGAACCACTTCGCCGGCGCCAGTGACAGCCACGGCGCCGAGGGGGAATGGCGGGTCGAACAGCAGCGCTACAGCTGGCCGATTCTTGATGCCTTCCGCGATGCCGCCGAGCAGAGTGGCATCGCCAAGGTGGCCGACTTCAACACAGGCGACAACGCAGGCTGTGGATACTTTCAGGTGAACCAGCGCAGCGGTGTGCGCTGGAACTCAGCCAAGGCGTTTCTCAGGCCTGTCCTCAAGCGGCCGAACCTCACCGTCTTGACCGGTGTGCAGGTCGACCAGGTGCTGCTCGACAACACGCGCGCCCGAGCGGTGAAGGCCTTGTGGCAAGGCGCTTGGCATGAGTTCGCCGCCCGTCGCGAGATCATCCTTTGTGCGGGCTCCGTCGGCTCGCCCGGCATTCTCCAGCGCTCCGGCATCGGCCCGCGCAAACTGCTGGAGGATCTGGGTATCGGTGTGCGCCACGACATGCCGGGTGTCGGCGGCAACCTGCAGGACCATTTGCAATTGCGCCTGATCTACCAGATCAACAACACCCGAACCCTCAACCAGATGGCCAACAGCCTGTGGGGCAAGCTGGGGATGGGCCTTCGTTATGCCTATGACCGCAGCGGCCCATTGGCCATGGCGCCCAGCCAGTTGGGTGCCTTCGCGCGATCAGGCCCTGAGCAGGCAACGGCCAACCTGCAATATCACGTGCAGCCGTTGTCGCTGGACCGCTTCGGTGAACCGCTGCATCGGTTCCCGGCCTTCACCGCCTCGGTATGCAACCTGCGCCCGGCCAGCCGCGGGCGAATCGATATCCGATCGGCGGACATGAATACCGCGCCGCTGATCGATCCCAACTACCTTAGCGCCCCTGAGGACCTGCGCGTCGCCGCCGACGCCATCCGCCTCACCCGGAAGATTGTCCAGGCCCCTGCCCTCGCCGCTTTCGCACCTCGCGAATACCTGCCCGGCCCTGCCCTGCAGAACGAGGAGGACTTGCACCAGGCCGCCGGCCAGATCGGCACCACCATCTTCCACCCGGTCGGCACCTGCCGCATGGGCAGCGGGCCGCTGGACGTTGTGGATAACCAGCTGCGCGTTCACGGCATCCCTGGCCTGCGCGTGGCCGACGCCTCGATCATGCCGCAGATCGTCTCCGGCAATACCTGTTCACCCACGTTGATGATTGCCGAAAAGGCGGCACAACTGATCCTCAAGGGGGCCAATACCCAGACCAACCTCAGCGACGCCAGCGCGATACCGACGCCCTGA MPSADSVYDYVVVGAGPAGCLLANRLSADPSCRVLLLEAGGRDNYPWIHIPVGYLYCIGNPRTDWCFKTESQPGLNGRSLGYPRGKVLGGCSSINGMIYMRGQAADYDRWAEQGNDGWAWKDVLPLFKASENHFAGASDSHGAEGEWRVEQQRYSWPILDAFRDAAEQSGIAKVADFNTGDNAGCGYFQVNQRSGVRWNSAKAFLRPVLKRPNLTVLTGVQVDQVLLDNTRARAVKALWQGAWHEFAARREIILCAGSVGSPGILQRSGIGPRKLLEDLGIGVRHDMPGVGGNLQDHLQLRLIYQINNTRTLNQMANSLWGKLGMGLRYAYDRSGPLAMAPSQLGAFARSGPEQATANLQYHVQPLSLDRFGEPLHRFPAFTASVCNLRPASRGRIDIRSADMNTAPLIDPNYLSAPEDLRVAADAIRLTRKIVQAPALAAFAPREYLPGPALQNEEDLHQAAGQIGTTIFHPVGTCRMGSGPLDVVDNQLRVHGIPGLRVADASIMPQIVSGNTCSPTLMIAEKAAQLILKGANTQTNLSDASAIPTP inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ; 1.-.-.- ; Unknown Class 3 GO:0019285 ; TIGR01810 betA choline dehydrogenase equivalog 3.7e-122 1.1.99.1 Cellular processes Adaptations to atypical conditions PF00732PF05199 GMC_oxred_N, GMC oxidoreductase. This family of proteins bind FAD as a cofactor..GMC_oxred_C, GMC oxidoreductase. This domain found associated with pfam00732.. COG2303 BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]. Amino acid transport and metabolism NC_008027 Chromosome PSEEN0013 YP_605825 104779327 Protein 14285 15904 major facilitator family transporter Class 3 ATGTCGGATTACATCCAGGAACAGGGGGCGGCGGCGAGCAGCCCCAGCCGCCGTGAAGAGCGCAAGATCATTTTCGCGTCATCCCTCGGGACGGTGTTCGAGTGGTATGACTTTTTTCTCTATGGCGCGCTGGCCGCAGTCATCAGCAAGCAGTTCTTTGCCGGCGTCAACGACACCACTGCCTTCATCTTTGCCTTGATGGCCTTCGCGGCCGGTTTCCTGGTGCGCCCGTTCGGGGCGCTGGTGTTCGGCCGGCTGGGTGACATGATTGGACGCAAATACACCTTCCTGGTGACCATTGTGCTGATGGGCCTGTCCACCTTCGCGGTGGGCCTGCTACCGACCTATGCCAGCATCGGCATCGCTGCCCCGATCATTCTGGTTGTGCTGCGCATGCTCCAGGGCCTGGCGCTGGGCGGTGAGTACGGTGGTGCGGCTACCTATGTCGCCGAGCACGCGCCCCATGGCAAGCGTGGTTTCCACACCGGCTTCATCCAGTCCACCGCCACGCTGGGCCTGCTGTTGTCGCTGACCGTGGTCCTGGCCAGCCGCTATATCAGCGGTGACCAGTTTGAAACCTGGGGCTGGCGCCTGCCGTTCCTGCTGTCGATCGTACTGCTGGCGATCTCCACCTGGATCCGCATGAGCATGCATGAGTCGCCGGCCTTCGTGAAAATGAAGGCCCAGGGCAAGGTGAGCAAATCGCCGATTCGTGAGTCGTTCACCTCCTGGCCCAACCTCAAGGTGGTGCTCACCGCGCTGTTCAGTATCAACGCCGGGCAGGCGGTGACCTTCTACACCGCACAGTTCTACGTGCTGTTCTTCATGACCCAGATGCTCAAGATGGACCCCGCCCAGGCCAACACGCTGCTGATCATCAGCGTGGTGATCGGCGCGCCGTTCTTCGTATTCTTCGGCTGGCTGTCGGACCGTGTTGGGCGCAAGCCGATCCTGATGCTTGGCCTGTTGCTGGCGACGGTGCTGTACTTCCCGTTGTTCAAGGCCCTGAGCCACTACGCCAACCCGCAGATCGATGCCGCCAGCCGCCAGGCACCGATTGTCGTCACCGCCGACCCCAAAGGCTGCACCTTCCAGTTCGACCCGGTGGGCAAGGCGCGCTTCGACAGCCCGTGCGACAAGGTCAAGACGTTCCTGGTCAAACAGGGCCTGCCCTATAGCTCGGTGAATGTCGGCGGCAGCGAGGTGATCGTCAGCATCGGTGACAAGACCATCAATGGCTTCGACGAGACGGCCATGCGCAGTGCCATCGATGCGGCGGGTTATCCGGCCAAGGCAGACCCGGCGAACGTGAACCAGGTAATGGTGGTGGTGCTGATCGTCGCCATGATCCTGATCGCCACCATGACCTACGGGCCTCTGGCGGCGGTGATGGTCGAGCTGTTCCCCACGCGTATTCGCTATACCTCGATGTCCCTGCCCTATCACATCGGTAACGGTTGGTTCGGGGGCTTCCTGCCAACGGTGTCGTTCGCGTTGGTGGTGTATACCGGGGATATCTTCTATGGGTTGTGGTATCCGGTGCTAATCACCGGGGTGAGCCTGGTGGTGGGGATCTTCTGTTTGAAAGAGACCCGGGATGTGGATATCGACAAGGTGTGA MSDYIQEQGAAASSPSRREERKIIFASSLGTVFEWYDFFLYGALAAVISKQFFAGVNDTTAFIFALMAFAAGFLVRPFGALVFGRLGDMIGRKYTFLVTIVLMGLSTFAVGLLPTYASIGIAAPIILVVLRMLQGLALGGEYGGAATYVAEHAPHGKRGFHTGFIQSTATLGLLLSLTVVLASRYISGDQFETWGWRLPFLLSIVLLAISTWIRMSMHESPAFVKMKAQGKVSKSPIRESFTSWPNLKVVLTALFSINAGQAVTFYTAQFYVLFFMTQMLKMDPAQANTLLIISVVIGAPFFVFFGWLSDRVGRKPILMLGLLLATVLYFPLFKALSHYANPQIDAASRQAPIVVTADPKGCTFQFDPVGKARFDSPCDKVKTFLVKQGLPYSSVNVGGSEVIVSIGDKTINGFDETAMRSAIDAAGYPAKADPANVNQVMVVVLIVAMILIATMTYGPLAAVMVELFPTRIRYTSMSLPYHIGNGWFGGFLPTVSFALVVYTGDIFYGLWYPVLITGVSLVVGIFCLKETRDVDIDKV inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 4.2.A.1 : The Major Facilitator Superfamily (MFS) ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ; Cytoplasmic Membrane Class 3 TIGR00883 2A0106 metabolite:proton symporter family protein subfamily 1.2e-102 Transport and binding proteins Unknown substrate PF00083PF07690 Sugar_tr, Sugar (and other) transporter..MFS_1, Major Facilitator Superfamily.. COG2814 AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]. Carbohydrate transport and metabolism NC_008027 Chromosome PSEEN0014 YP_605826 104779328 Protein 16896 16126 hdtS N-acylhomoserine lactone synthase Class 2 ATGTCGATCCTGCAGGCGATCAGAATCTTTCTTTTTTACCTGCTGTTGGGCACCAGTTCGCTGCTGTGGTGCTCGCTGAGCTTCTTCGTCGCGCCTTTCCTGCCGTTCCCCAAGCGCTACAAGTTCATCAACGTGTACTGGTGCCGCTGCGCGCTGTTCCTGGTGAAGACGATCCTCGGGATCGACTACAAGATCACCGGCGCCGAACATGTGCCTGATGTGCCGTGCGTGATCCTGTCGAACCACCAGAGCACCTGGGAGACGTTCTTCCTTTCGGCGTACTTCTCGCCGCTGAGCCAGGTACTCAAGCGCGAGCTGCTGTACGTGCCGTTCTTCGGCTGGGCCATGGCCATGCTGCGACCGATCGCCATCGACCGGAAGAACCCGAAAGAGGCCTTGCGCCAGGTTGCCAGCCAGGGTGACGAGTTGCTCAAACAGGGCACCTGGGTGCTGATCTTCCCCGAAGGCACCCGCGTGCCCCACGGCCAGATGGGCAAGTTCTCCCGCGGTGGCACCGCGCTCGCAGTGAATGCCGGCCTGCCGGTGCTGCCGATCGCCCACAACGCCGGCAAGTTCTGGCCCCGTGAAGGCTGGGGCAAGCGCCCGGGCACCATCGAGGTGGTAATTGGCGCGCCGATGTACCCGGAAGGGACGGGGCCACGGGCCATTGCCGAGCTCAACGACCGCGCCCAGGCGTGGAACGAGGCAGCCCAGCGGGCCATGGGTTCGCTGCCGCCGGTGGCGGAAAATCCGGAACAGCAGCACGCCTGA MSILQAIRIFLFYLLLGTSSLLWCSLSFFVAPFLPFPKRYKFINVYWCRCALFLVKTILGIDYKITGAEHVPDVPCVILSNHQSTWETFFLSAYFSPLSQVLKRELLYVPFFGWAMAMLRPIAIDRKNPKEALRQVASQGDELLKQGTWVLIFPEGTRVPHGQMGKFSRGGTALAVNAGLPVLPIAHNAGKFWPREGWGKRPGTIEVVIGAPMYPEGTGPRAIAELNDRAQAWNEAAQRAMGSLPPVAENPEQQHA inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 5.6.3 : Cell killing ;function prediction: 3.1.2.4.4 : Quorum sensing ;function prediction: 1.6.1 : Phospholipid ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ; Unknown Class 3 TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases subfamily_domain 2.8e-28 2.3.1.51 Fatty acid and phospholipid metabolism Biosynthesis PF01553 Acyltransferase, Acyltransferase. This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function. This family also includes tafazzin, the Barth syndrome gene.. COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]. Lipid metabolism NC_008027 Chromosome PSEEN0015 YP_605827 104779329 Protein 17459 16962 histidinol-phosphatase Class 3 GTGATCAACCACGACTCCGACGCCTACATCAAGTCGCTGGAGGAGTGGGTTCCCATTCCCGGCTCGATCGAGGCCATCGCGCAGTTGAGCAAGGCGGGCTGGACGGTGGCTGTTGCCACCAACCAGTCCGGCATTGCCCGTGGCTACTACCCGCTGGAAACCCTCGAGGCCATGCATGCGCGCCTGCGCGCGCTGGTGGCCGAGCTGGGCGGCGAGGTTGGCTTGATCGTGCATTGCCCGCACGGCCCGGATGAAGGCTGCGATTGCCGCAAGCCCAAGCCCGGCATGCTGCGGGCAATCGCCGAGCACTACCAGGTACCGCTGGCCGGCGTATGGTTCGTCGGCGACAGCAAAGGTGACCTGGAGGCGGCCCTGGCCGTCGATGCACAACCCGTGTTGGTAAAAACCGGCAAGGGCGAAAGGACCCTGGAAAAAGGCGTCCCGGAAACTACACTGATTTTCGACGATCTGGCAGCCATCGCCAGAGAACTTATTTAA MINHDSDAYIKSLEEWVPIPGSIEAIAQLSKAGWTVAVATNQSGIARGYYPLETLEAMHARLRALVAELGGEVGLIVHCPHGPDEGCDCRKPKPGMLRAIAEHYQVPLAGVWFVGDSKGDLEAALAVDAQPVLVKTGKGERTLEKGVPETTLIFDDLAAIARELI inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.5.1.16 : Histidine ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ; 3.1.3.15 ; Cytoplasmic Class 3 TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain No data 2.2e-40 No data No data PF00702PF08645 Hydrolase, haloacid dehalogenase-like hydrolase. This family are structurally different from the alpha/ beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment. The rest of the fold is composed of the core alpha/beta domain..PNK3P, Polynucleotide kinase 3 phosphatase. Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin.. COG0241 HisB, Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]. Amino acid transport and metabolism NC_008027 Chromosome PSEEN0016 YP_605828 104779330 Protein 19548 17494 glyS glycyl-tRNA synthetase, beta chain Class 2 ATGAGTGCTCAAGATTTCCTGGTTGAACTGGGCACCGAAGAGCTGCCACCGAAGGCCCTGGCCTCGTTGGGCGATGCGTTCCTCGCCGGCATCGAGAAAGGCTTGCAGGCCGCCGGCCTGAACTACACCAGCAAGCAGGTCTACGCCGCGCCGCGCCGCCTGGCCGTGCTGCTGCGCCAGCTGGACGTGCAACAGCCGGATCGCAGCATCAACATCGACGGCCCGCCCCGCCAGGCGGCCTTCGACGCCGAAGGCAACCCGACTCAAGCCGCCCTGGGCTTCGCCAAGAAGTGCGGCGTGGAGCTGTCGGACATCGACCAGAGCGGCCCGAAGCTGCGCTTCTCGCAGCACATTCCGGGCAAGGCCACCGCCAGCCTGCTGCCCACCATCGTTGAGGATTCGCTCAACGACCTGCCGATCCCCAAGCGCATGCACTGGGGCGCCAGCCGTGAAGAGTTCGTGCGCCCGACGCAATGGCTGGTGATGCTGCTCGGCGACCAGGTCGTCGACTGCACCATCCTCGCCCAGAAAGCCGGCCGTGAATCCCGTGGCCACCGCTTCCACCACCCTGAGAACGTGGTCATCACCACCCCGGCCAACTACGTCGAAGACCTGCGCAAAGCCTACGTGCTGGCCGACTTCGCCGAGCGTCGCGAGCTGATCAGCAAGCGCACCGCGGAACTGGCCATGCAGCAGGAAGGCTCGGCCATCGTGCCGCCGGCGCTGCTGGACGAAGTGACCGCCCTGGTCGAGTGGCCGGTGCCGCTGGTGTGCTCGTTCGAGGAGCGTTTCCTCGAGGTGCCGCAGGAAGCCCTGATCACCACCATGCAGGACAACCAGAAGTACTTCTGCCTGCTGGACAGTGAAGGCAAGCTGCTGCCGCGCTTCATCACCGTGGCCAACGTCGAGAGCCGCGATCCGAAGCAGATCGTCGAAGGCAACGAGAAGGTCGTGCGCCCACGCCTGACCGACGCCGAGTTCTTCTTCAAGCAAGACAAGAAGCAACCGCTGGAAAGCTTCAACGAGCGCCTGAAGAACGTGGTGTTCCAGGCTCAGCTGGGCACCGTGTTCGACAAGGCCGAGCGCGTGTCGAAACTGGCTGCCTTCATTGCCCCGTACATCGGCGGCAGCGCCGCCAACGCTGGCCGTGCCGGCCTGCTGTCCAAGTGCGACCTGGCCTCGGAGATGGTCGGTGAATTCCCTGAAATGCAGGGTATCGCCGGCTACTACTACGCCCTCAACGACGGTGAGCCGCAAGACGTCGCCCTGGCACTGAACGAGCAGTACATGCCGCGCGGCGCTGGCGCCGAGCTGCCGCAAACCCTCACCGGTGCCGCCGTGGCCATCGCCGACAAGCTCGACACCCTGGTCGGCATCTTCGGCATCGGCATGCTGCCCACCGGCAGCAAGGATCCGTACGCCCTGCGCCGTGCCGCCCTGGGCGTGCTGCGCATCCTGATCGAGAAACAGCTGGACCTGGACCTGACCACCGCGGTCGAGTTCGCGGTCAAGCAGTTCGGCACCAAGGTGAAGGCTGCCGGCTTGTCCGAGCAGGTGCTGGAGTTCATCTTCGACCGCCTGCGCGCGCGTTACGAAGACGAAGGCATCGACGTTGCCACCTACCTGTCGGTGCGTGCCCTGAAGCCGGGCTCGGCCCTGGACTTCGACCAGCGCGTACAGGCCGTGCAGGCCTTCCGCAAGCTGCCGGAAGCCAATGCCCTGGCTGCGGCGAACAAGCGCGTGTCGAACCTGCTGGGCAAGGCCGAAGGCGCCATCGCCGACCAGGTCGAGCCCAAGTACTTCGACAACGCCAACGAGTTCTCGCTGTACTCGGCCATCCAGCAGGCCGACCAGGCCGTGCAGCCGATGGCCTCCGCGCGCCAGTACAACGAAGCCCTGGCCCGCCTGGCCGCCCTGCGCGACCCGGTAGACGCCTTCTTCGAAGCGGTACTGGTCAACGCCGAGGACGCCAAGGTACGCGCCAACCGTTATGCCCTGCTCAGCCGCCTGCGCGGCCTGTTCCTGGGCGTGGCCGATATCTCGCTGCTGGGGTAA MSAQDFLVELGTEELPPKALASLGDAFLAGIEKGLQAAGLNYTSKQVYAAPRRLAVLLRQLDVQQPDRSINIDGPPRQAAFDAEGNPTQAALGFAKKCGVELSDIDQSGPKLRFSQHIPGKATASLLPTIVEDSLNDLPIPKRMHWGASREEFVRPTQWLVMLLGDQVVDCTILAQKAGRESRGHRFHHPENVVITTPANYVEDLRKAYVLADFAERRELISKRTAELAMQQEGSAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDSEGKLLPRFITVANVESRDPKQIVEGNEKVVRPRLTDAEFFFKQDKKQPLESFNERLKNVVFQAQLGTVFDKAERVSKLAAFIAPYIGGSAANAGRAGLLSKCDLASEMVGEFPEMQGIAGYYYALNDGEPQDVALALNEQYMPRGAGAELPQTLTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLTTAVEFAVKQFGTKVKAAGLSEQVLEFIFDRLRARYEDEGIDVATYLSVRALKPGSALDFDQRVQAVQAFRKLPEANALAAANKRVSNLLGKAEGAIADQVEPKYFDNANEFSLYSAIQQADQAVQPMASARQYNEALARLAALRDPVDAFFEAVLVNAEDAKVRANRYALLSRLRGLFLGVADISLLG inference: non-experimental evidence, no additional details recorded ;inference: ab initio prediction:AMIGene:2.0 ;function prediction: 2.3.1 : Amino acid-activation ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ; 6.1.1.14 ; Unknown Class 3 GO:0009345 ; TIGR00211 glyS glycyl-tRNA synthetase, beta subunit equivalog_domain 3.5e-226 6.1.1.14 Protein synthesis tRNA aminoacylation PF02092PF05746 tRNA_synt_2f, Glycyl-tRNA synthetase beta subunit..DALR_1, DALR anticodon binding domain. This all alpha helical domain is the anticodon binding domain in Arginyl and glycyl tRNA synthetase. This domain is known as the DALR domain after characteristic conserved amino acids.. COG0751 GlyS, Glycyl-tRNA synthetase, beta subunit [Translation, ribosomal structure and biogenesis]. Translation, ribosomal structure and biogenesis NC_008027 Chromosome PSEEN0017 YP_605829 104779331 Protein 20492 19545 glyQ glycyl-tRNA synthetase, alpha chain Class 2 GTGAGCCAGCCTACGCCAGCCGTGCGTACCTTCCAAGACCTGATCCTCGCCCTGCAGAACTACTGGGCCGAGCAAGGTTGTGTGGTGCTTCAGCCCTACGATATGGAAGTAGGCGCCGGCACTTTCCATACCGCCACCTTCCTGCGCGCCGTGGGCCCGGAGACGTGGAACGCCGCCTATGTGCAGCCTAGCCGTCGCCCCGCCGACGGACGGTATGGTGAAAACCCCAACCGCCTGCAGCACTACTACCAGTTCCAGGTGGTGCTCAAGCCGAACCCGGCCAACTTCCAGGAGCTGTACCTCGGCTCGCTGAAAGCCATCGGCCTGGACCCGCTGGTTCACGACATCCGTTTCGTCGAAGACAACTGGGAATCGCCAACCCTGGGCGCCTGGGGCCTGGGCTGGGAAATCTGGCTGAACGGCATGGAGGTGACCCAGTTCACCTACTTCCAGCAGGTCGGCGGCATCGAGTGCTACCCGGTCACCGGTGAAATCACCTACGGCCTGGAGCGCCTGGCCATGTACCTGCAGGGCGTGGACTCGGTCTACGACCTGGTGTGGGCCGACGGCCCGTTCGGCAAGGTCACCTACGGCGACGTGTTCCACCAGAACGAAGTGGAGCAGTCGACCTACAACTTCGAGCACGCCAACGTCGAGAAACTGTTCGAGCTGTTCGACTTCTATGAGAGCGAAGCGAACCGCCTGATCAAGCTGGACCTGCCGCTGCCCACCTACGAAATGGTCCTGAAGGCCTCGCACACCTTCAACCTGCTGGACGCCCGCCGCGCCATCTCGGTGACCGAGCGCCAGCGCTACATCCTGCGCGTACGCACGCTCGCCCGTGACGTGGCGCAAAGCTACCTGCAAGCCCGCGCACGCCTGGGCTTCCCGATGGCTTCTCCTGAACTGCGTGACGAAGTGTTGGCTAAGCTGGAGGCTGCACAATGA MSQPTPAVRTFQDLILALQNYWAEQGCVVLQPYDMEVGAGTFHTATFLRAVGPETWNAAYVQPSRRPADGRYGENPNRLQHYYQFQVVLKPNPANFQELYLGSLKAIGLDPLVHDIRFVEDNWESPTLGAWGLGWEIWLNGMEVTQFTYFQQVGGIECYPVTGEITYGLERLAMYLQGVDSVYDLVWADGPFGKVTYGDVFHQNEVEQSTYNFEHANVEKLFELFDFYESEANRLIKLDLPLPTYEMVLKASHTFNLLDARRAISVTERQRYILRVRTLARDVAQSYLQARARLGFPMASPELRDEVLAKLEAAQ inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 2.3.1 : Amino acid-activation ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ; 6.1.1.14 ; Cytoplasmic Class 3 GO:0009345 ; TIGR00388 glyQ glycyl-tRNA synthetase, alpha subunit equivalog_domain 6.6e-169 6.1.1.14 Protein synthesis tRNA aminoacylation PF02091 tRNA-synt_2e, Glycyl-tRNA synthetase alpha subunit.. COG0752 GlyQ, Glycyl-tRNA synthetase, alpha subunit [Translation, ribosomal structure and biogenesis]. Translation, ribosomal structure and biogenesis NC_008027 Chromosome PSEEN0018 YP_605830 104779332 Protein 20577 21128 tag 3-methyl-adenine DNA glycosylase I, constitutive Class 2 ATGCCACGCTGCTTTTGGTGTTCCGACGATCCTTTGTACGAGGCCTATCACGACCACGAGTGGGGAACGCCGCAGCGCGACCCGGCGTTGCTCTTCGAGATGCTTTTGCTCGAAGGGTTCCAGGCGGGGCTCTCGTGGATCACCGTATTGAAGAAACGTGAGCGTTATCGTGAAGTGCTGCACGGGTTCGACCCGGTGCAACTGGCGCGCTTGAGCGATGAACGCATCGAGGCGTTGATGCTCGACGCGGGCATCATCCGCAACCGCCTCAAGCTCAAGGCCGTGCGCCGCAACGCCGAGGCCTGGCTGGCTGTGGATAACCCCGCCGAGTGGCTGTGGTCGTTCGTCGGTGGGCAACCGAAGATCAACCATTTCGCCACCCGCAACGATGTGCCGGCGGTGACCGACGAAGCCAAGGCCATGAGCAAGGCCCTGCAGAAGGCCGGCTTCACGTTCGTTGGCCCGACCATCTGCTACGCCTTCATGCAGGCCACCGGCATGGTCATGGACCACACCACCGACTGTGATCGCTACGCCGCGCTGGCGCGCTGA MPRCFWCSDDPLYEAYHDHEWGTPQRDPALLFEMLLLEGFQAGLSWITVLKKRERYREVLHGFDPVQLARLSDERIEALMLDAGIIRNRLKLKAVRRNAEAWLAVDNPAEWLWSFVGGQPKINHFATRNDVPAVTDEAKAMSKALQKAGFTFVGPTICYAFMQATGMVMDHTTDCDRYAALAR inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 2.1.4 : DNA repair ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ; 3.2.2.20 ; Cytoplasmic Membrane Class 3 GO:0008725 ; TIGR00624 tag DNA-3-methyladenine glycosylase I subfamily 1.4e-120 3.2.2.20 DNA metabolism DNA replication, recombination, and repair PF03352 Adenine_glyco, Methyladenine glycosylase. The DNA-3-methyladenine glycosylase I is constitutively expressed and is specific for the alkylated 3-methyladenine DNA.. COG2818 Tag, 3-methyladenine DNA glycosylase [DNA replication, recombination, and repair]. DNA replication, recombination, and repair NC_008027 Chromosome PSEEN0019 YP_605831 104779333 Protein 21170 22057 lipid A biosynthesis lauroyl acyltransferase Class 3 GTGGAAAAGTTCAAGGGCGCCCTGATGGTCGGGGTGCTGCGCCTGTTTGCCAAGCTGCCCTGGGGCGCTGTGCAGCGCGTCGGCGCCGGTATCGGCTGGCTTATGTGGAAAGTCCCCAATGGCTCGCGCAATGTCGTGCGCATCAACCTGGCCAAGTGTTTCCCGGAGATGGACCCGGTTGAGCGCGAGCAACTGGTGGGTCGTGCGTTGAAGGATATCGGCAAGTCGTTCGTCGAGAGCGCCTGCGCCTGGATCTGGCCACCGCAGCGCTCGCTGGAACTGGTCAAGGAAGTGCACGGCCTGGAAGTGCTGGAGCAGGCCCTGGCCTCGGGCAAGGGCGTGGTGGGCATCACCAGCCACCTGGGCAACTGGGAAGTGCTCAACCACTTCTATTGCAACCAGTGCAAACCGATCATCTTCTATCGCCCGCCCAAGTTGAAGGCGGTGGATGACCTGCTGCGTGAGCAGCGCGTGCAGATGGGCAACCGCGTGGCGCCCTCGACCAAGGAAGGCATTCTCAGCGTGATCAAGGAAGTGCGCCGGGGTGGGCAGGTGGGGATTCCCGCGGATCCGGAGCCGGCCGAGTCGGCGGGTGTGTTCGTGCCGTTCCTCGGTACCCAGGCACTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGCGGCAAGGCGGTCGGGGTGTTCCTGCATGCCCTGCGGTTGCCGGATGGGTCAGGCTTCAAGGTGTTCCTCGAGGCGGCGCCGGAAGAGATGTACAGCGAGGATGTGACGGTAGCGGCGGCGGCCATGAGCAAGGTGGTCGAGCGTTATGTGCGCGAGTATCCGAGCCAGTACATGTGGAGCATGAAGCGCTTCAAGAAGCGCCCGGCGGGCGAGGCGCGCTGGTATTGA MEKFKGALMVGVLRLFAKLPWGAVQRVGAGIGWLMWKVPNGSRNVVRINLAKCFPEMDPVEREQLVGRALKDIGKSFVESACAWIWPPQRSLELVKEVHGLEVLEQALASGKGVVGITSHLGNWEVLNHFYCNQCKPIIFYRPPKLKAVDDLLREQRVQMGNRVAPSTKEGILSVIKEVRRGGQVGIPADPEPAESAGVFVPFLGTQALTSKFVPNMLAGGKAVGVFLHALRLPDGSGFKVFLEAAPEEMYSEDVTVAAAAMSKVVERYVREYPSQYMWSMKRFKKRPAGEARWY inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.6.3.3 : Lipid A ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ; Cytoplasmic Membrane Class 3 GO:0009245 ; TIGR02207 lipid_A_htrB lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase subfamily 6.3e-17 2.3.1.- Cell envelope Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides PF03279 Lip_A_acyltrans, Bacterial lipid A biosynthesis acyltransferase.. COG1560 HtrB, Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane]. Cell envelope biogenesis, outer membrane NC_008027 Chromosome PSEEN0021 YP_605832 104779334 Protein 22489 22181 hypothetical protein Class 4 ATGCGTGAATCGCTGGAGAAAATGCTGGCCAAGGGTGTGGATAACCCGCTGCTGCGGTTCGGGCTGGGCAAGGCCTGGCTGGACGAGGGCAATGGCGCTGAAGCGGCGGTGCACCTGGCGGCTTGTGTGCGGCAGGATCCGAAGTACTCGGCGGCGTGGAAGCTGCTGGGGAAGGCGTATCAGCTCAGCGGCGATCTGGCTGGCGCGCGCACGGCCTGGGAAGAGGGGATCGTCGCGGCGCAGGCCCATGGCGACAAGCAGGCCGAGAAAGAGATGACCGTTTTCCTCAAGAAGCTCAACAAGGCTTGA MRESLEKMLAKGVDNPLLRFGLGKAWLDEGNGAEAAVHLAACVRQDPKYSAAWKLLGKAYQLSGDLAGARTAWEEGIVAAQAHGDKQAEKEMTVFLKKLNKA inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 4 : Homologs of previously reported genes of unknown function ; Cytoplasmic Class 3 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only]. General function prediction only NC_008027 Chromosome PSEEN0022 YP_605833 104779335 Protein 23874 22501 trkA potassium transport protein, NAD(P)-binding (Trk family) Class 2 ATGAAGATCATCATCCTCGGCGCAGGGCAGGTGGGCGGCACGCTGGCGGAACACCTGGCCAGCGAAGCCAACGACATCACCGTGGTCGACACCGACAGCGAGCGCCTGCGCGACCTGGGCGACCGCCTGGACATCCGCACCGTGCAGGGCCGCGCGTCGCTGCCGACGGTACTGCGCCAGGCCGGCGCCGACGACGCCGACATGCTGGTGGCGGTAACCAACAGTGACGAGACCAACATGGTCGCCTGCCAGGTCGCCTACTCGCTGTTCCACACCCCGACCAAGATCGCCCGGGTACGCGAGTCGGCCTACCTCACCCGTGAAGAGCTGTTCGACAACGACCACATCCCGGTGGACGTGCTGATCAGCCCCGAGCAGGTGGTGACCAACTACATCAAGCGCCTGATCGAACACCCAGGTTCGCTGCAGGTGATCGACTTCGCCGAGGGCAAGGCCCAGCTGGTGGCGGTCCGGGCCTACTACGGCGGCCCGCTGGTGGGCCAGCAACTGCGCCAGATCCGCGCCCACATGCCCAATGTCGACACCCGCGTGGCGGCGATCTTCCGCCGCGACCGGCCGATCACCCCGCAGGGCGACACGGTGATCGAGGCCGACGACGAAGTGTTCTTCATCGCCGCGAAGAAGGACATCCGCGCAGTGATGGGTGAGCTGCGTCGCATCGACGAGACCAACAAGCGCGTGGTCATCGCCGGTGGCGGGCAGATCGGCGAGCGCCTGGCCGAGGCCATCGAGAGCCGCTACCAGGTGAAGATCATCGAGATGAACCCGGCACGCTGCCGCCACCTCTCGGAAAACCTCGAGAGCACCGTGGTGCTCCAAGGCAGTGCGTCCGACCGGGACCTGATGCTCGAAGAAAACATCGCCGACGCCGACATCTTCCTGGCCCTGACCAACGACGACGAGGCCAACATCATGTCGTCGCTGCTGGCCAAGCGCTTGGGTGCGCGCAAGGTGATGACCATCATCAACAACCCGGCCTACGTCGACCTGGTGCAGGGCGGCGAGATCGACATCGCCATCAGCCCGCAGCTGGCCACCATCGGCACCTTGCTGGCCCACGTGCGCCGCGGCGATATCGTCAGCGTGCACTCGCTGCGCCGGGGCGCGGCCGAGGCCATCGAGGCGGTGGCCCATGGCGATTCGAAGTCGAGCAAGGTGGTGGGCAAGGCCATCGAGGACATCTCGTTGCCGCCAGGCACCACCATCGGCGCGATCATCCGCGACGAGGAAGTGCTGATCGCCCACGATGACACGGTGATCGCGTCGGGCGACCATGTGATCCTGTTCGTTGTGGATAAAAAGCAGATTCGAGACGTGGAGAAACTGTTCCACGTGGGCCTGAGTTTCTTCTAG MKIIILGAGQVGGTLAEHLASEANDITVVDTDSERLRDLGDRLDIRTVQGRASLPTVLRQAGADDADMLVAVTNSDETNMVACQVAYSLFHTPTKIARVRESAYLTREELFDNDHIPVDVLISPEQVVTNYIKRLIEHPGSLQVIDFAEGKAQLVAVRAYYGGPLVGQQLRQIRAHMPNVDTRVAAIFRRDRPITPQGDTVIEADDEVFFIAAKKDIRAVMGELRRIDETNKRVVIAGGGQIGERLAEAIESRYQVKIIEMNPARCRHLSENLESTVVLQGSASDRDLMLEENIADADIFLALTNDDEANIMSSLLAKRLGARKVMTIINNPAYVDLVQGGEIDIAISPQLATIGTLLAHVRRGDIVSVHSLRRGAAEAIEAVAHGDSKSSKVVGKAIEDISLPPGTTIGAIIRDEEVLIAHDDTVIASGDHVILFVVDKKQIRDVEKLFHVGLSFF inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 6.1 : Membrane ;function prediction: 7.3 : Inner membrane ;function prediction: 4.2.A.38 : The K+ Transporter (Trk) Family ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ; Cytoplasmic Class 3 PF02254PF02080 TrkA_N, TrkA-N domain. This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD..TrkA_C, TrkA-C domain. This domain is often found next to the pfam02254 domain. The exact function of this domain is unknown. It has been suggested that it may bind an unidentified ligand. The domain is predicted to adopt an all beta structure.. COG0569 TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]. Inorganic ion transport and metabolism NC_008027 Chromosome PSEEN0023 YP_605834 104779336 Protein 25210 23900 sun Ribosomal RNA small subunit methyltransferase B (rRNA (cytosine-C(5)-)-methyltransferase) (16S rRNA m5C967 methyltransferase) Class 2 ATGAACCCACGCCTGGCCGCCGCCCGTGCCCTTGCCGCCGTGCTCAGCGGCAAGGCCTCGCTGAACAGCTCGCTGCCGGCGCAACTGGACAAGGTCGACGAGCGCGACCGTGGCCTGACCCAGGACCTAGCCTTCGGCACCGCCCGCTGGCAGCCACGCCTGGACCTGCTGGCCGCGCAACTGCTGCAGAAGCCGTTCAAGGCCGCCGATGCCGATGTGCAGGCGCTGCTGCTGGTCGGCCTGTACCAGCTGTTCTACACGCGCATCCCGGCACACGCCGCCCTCGGCGAGACCGTCGGCTGCGCCGACAAGCTCAAGAAGCCATGGGCCAAGGGCCTGCTCAACGCCGTGCTGCGCCGCGCCCAGCGTGAAGGCGAGGAACTGCTCGCCAGCATGGAACGCGACCCGGTGGTGCGCACCGCCCACCCGCGCTGGCTGCAGAAGTCGCTGAAAGCCTTCTGGCCGGAGCAGTGGGAAGCCATCTGCGCCGCCAACAACGCCCACCCGCCGATGATTCTGCGGGTCAATCGCCGCCACCACAGCCGTGACGCCTACCTGTCGTTGCTGGCCGAGGCCGGCATCCAGGCCAGCGCCTGCCAGTTCAGCCGTGACGGCATCGTCCTGGCCGAAGCCTGCGACGTGCGTGGCCTGCCGGGCTTCGCCGACGGTTGGGTGAGCGTGCAGGACGAAGCCGCGCAGCTGTCCGCCGACCTGCTGGAACTGGCCCCCGGCCAGCGCGTGCTCGACGCCTGCTGCGCCCCGGGCGGCAAGACCTGCCACCTACTGGAAGCCGAACCCGGCCTGGCCCACATGGTCGCCATCGACCTGGAAGCCAAGCGACTGGCCCGCGTGCGCGAGAACCTCGACCGCCTGAAGCTCGACGCGGAGCTGATCGCCTGCGACGCCCGTGACACCGCCAGCTGGTGGGACGGCAAGCCATTCCAGCGCATCCTGCTCGACGCGCCATGCTCGGCCACCGGTGTGATCCGCCGTCACCCGGACATCAAGCTGACCCGTCAGGCCGAGGACATCCCGGCCCTGGCCACGCTGCAAGGCGAGCTGCTCGATGCCCTGTGGCCGACCCTGGAAGTGGGCGGCATGTTGCTCTACGCCACCTGCTCGAGCCTGCCGACCGAGAACACCGAAGTGATCGACGCCTTCCTCGCCCGCACCCCCGGTGCCCGCGAGCTGGACCTGGCCACCGAAGCCGGCCTGCGCCAGCCCCACGGCCGCCAGCTGCTGGCCCAGGAAGGCGGCCATGACGGGTTCTATTACGCCAAACTGATCAAGATCGCCGCTTCGCGCGGGTAA MNPRLAAARALAAVLSGKASLNSSLPAQLDKVDERDRGLTQDLAFGTARWQPRLDLLAAQLLQKPFKAADADVQALLLVGLYQLFYTRIPAHAALGETVGCADKLKKPWAKGLLNAVLRRAQREGEELLASMERDPVVRTAHPRWLQKSLKAFWPEQWEAICAANNAHPPMILRVNRRHHSRDAYLSLLAEAGIQASACQFSRDGIVLAEACDVRGLPGFADGWVSVQDEAAQLSADLLELAPGQRVLDACCAPGGKTCHLLEAEPGLAHMVAIDLEAKRLARVRENLDRLKLDAELIACDARDTASWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQAEDIPALATLQGELLDALWPTLEVGGMLLYATCSSLPTENTEVIDAFLARTPGARELDLATEAGLRQPHGRQLLAQEGGHDGFYYAKLIKIAASRG inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 2.2.3 : RNA modification ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ; 2.1.1.- ; Cytoplasmic Class 3 GO:0016434 ; TIGR00563 rsmB sun protein equivalog 9e-135 2.1.1.- Protein synthesis tRNA and rRNA base modification PF01189PF01029 Nol1_Nop2_Fmu, NOL1/NOP2/sun family..NusB, NusB family. The NusB protein is involved in the regulation of rRNA biosynthesis by transcriptional antitermination.. COG0144 Sun, tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]. Translation, ribosomal structure and biogenesis NC_008027 Chromosome PSEEN0024 YP_605835 104779337 Protein 26139 25207 fmt methionyl-tRNA formyltransferase Class 2 ATGCGCATCGTCTTCGCAGGCACTCCAGAGTTTGCCGCCGAACACCTCAAGGCCCTGCTCGACAGCCCGTACGAGATCGTGGCCGTCTACACCCAGCCCGACCGCCCGGCTGGCCGTGGCCAGAAGCTCATGCCGAGCGCAGTGAAGGCACTGGCCGTTGCCCACGACATCCCGGTGTACCAGCCGCAGACCCTGCGCAACCCCGAGGCGCAAGCCGAGCTCGCCGCGCTCAAGCCGGACCTGATGGTGGTGGTCGCCTATGGCCTGATCCTGCCGCAAGTGGTGCTGGATATTCCGCGCCTGGGTTGCATCAACAGCCATGCCTCCCTGCTGCCGCGCTGGCGCGGGGCGGCGCCGATCCAGCGTGCCGTGGAAGCCGGCGACGCCGAGAGCGGCGTGACCGTGATGCGTATGGAAGCGGGCCTGGATACCGGCCCGATGTTGCTCAAGGTGGTTACCCCGATCAGCGCCGAGGACACTGGCGGCACCCTGCACGACCGCCTCGCCGCCATGGGCCCGGGCGCCGTGGTGCAGGCCATCGCCGGCCTGGCCGACGGTTCGCTGCAAGGTGAAGTACAGGACGATACCCTGGCCACTTATGCACACAAGCTGAACAAGGACGAGGCGCGCATCGACTGGAACCGCCCAGCCGTCGAACTGGAACGCCTGATCCGTGCCTTCAACCCGTGGCCGGTGTGCCACAGCACCCTCGACGGCGAAAGCGTGAAGGTGCTGGCCGCCAACTTGTCCACAGGCAAGGGCACTCCTGGTGAGATCCTCTCCGCCAGCAAGGACGGCCTGGTCGTCGCCTGCGGTGATGGCGCCCTGAGCCTGACCCGCCTGCAACTGCCCGGCGGCAAGGCCCTGGCCTTCAGCGACCTGTTCAACAGCCGCCGCGAGAAGTTCGCCGGTGGCAAGGTGCTCGGCCAATGA MRIVFAGTPEFAAEHLKALLDSPYEIVAVYTQPDRPAGRGQKLMPSAVKALAVAHDIPVYQPQTLRNPEAQAELAALKPDLMVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAAPIQRAVEAGDAESGVTVMRMEAGLDTGPMLLKVVTPISAEDTGGTLHDRLAAMGPGAVVQAIAGLADGSLQGEVQDDTLATYAHKLNKDEARIDWNRPAVELERLIRAFNPWPVCHSTLDGESVKVLAANLSTGKGTPGEILSASKDGLVVACGDGALSLTRLQLPGGKALAFSDLFNSRREKFAGGKVLGQ inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 2.2.5 : tRNA ;function prediction: 2.3.2 : Translation ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ; 2.1.2.9 ; Unknown Class 3 GO:0006431 ; TIGR00460 fmt methionyl-tRNA formyltransferase equivalog 1.1e-126 2.1.2.9 Protein synthesis tRNA aminoacylation PF00551PF02911 Formyl_trans_N, Formyl transferase. This family includes the following members. Glycinamide ribonucleotide transformylase catalyses the third step in de novo purine biosynthesis, the transfer of a formyl group to 5'-phosphoribosylglycinamide. Formyltetrahydrofolate deformylase produces formate from formyl- tetrahydrofolate. Methionyl-tRNA formyltransferase transfers a formyl group onto the amino terminus of the acyl moiety of the methionyl aminoacyl-tRNA. Inclusion of the following members is supported by PSI-blast. HOXX_BRAJA (P31907) contains a related domain of unknown function. PRTH_PORGI (P46071) contains a related domain of unknown function. Y09P_MYCTU (Q50721) contains a related domain of unknown function..Formyl_trans_C, Formyl transferase, C-terminal domain.. COG0223 Fmt, Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis]. Translation, ribosomal structure and biogenesis NC_008027 Chromosome PSEEN0025 YP_605836 104779338 Protein 26709 26203 def-1 peptide deformylase 1 Class 2 ATGGCCATCTTGAACATTCTCGAATTCCCCGATCCGCGCCTGCGCACCATTGCCAAACCGGTAACGGAGTTCGACGACGCCCTGCGCCAGTTGATCGACGACATGTTCGAGACCATGTACGAAGCCCCTGGCATCGGCCTGGCGGCCACCCAGGTCAACGTGCACAAGCAGGTCGTGGTGATGGACCTGAGCGAAGACCGCAGCGAACCGCGCGTCTTCATCAACCCCACGGTCGAGGAGCTGACCCACGACATGGGCCAGTACCAGGAAGGCTGCCTGTCGGTGCCCGGCTTCTACGAAAACGTAGACCGCCCGCTGCGTGTGCGGGTCAAGGCCCAGGACCGCGACGGCAAGCCCTATGAACTCGAAGCCGAAGGCCTGCTGGCCGTATGCGTGCAGCACGAGTTCGACCACCTCAACGGCAAGCTGTTCGTCGACTACCTGTCCCAGCTCAAACGCGACCGGATCAAGAAGAAGCTGGAAAAGCAGCACCGCCAGCAAGCCTGA MAILNILEFPDPRLRTIAKPVTEFDDALRQLIDDMFETMYEAPGIGLAATQVNVHKQVVVMDLSEDRSEPRVFINPTVEELTHDMGQYQEGCLSVPGFYENVDRPLRVRVKAQDRDGKPYELEAEGLLAVCVQHEFDHLNGKLFVDYLSQLKRDRIKKKLEKQHRQQA inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 2.3.3 : Posttranslational modification ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ; 3.5.1.88 ; Cytoplasmic Class 3 GO:0042586 ; TIGR00079 pept_deformyl peptide deformylase equivalog 7.4e-77 3.5.1.88 Protein fate Protein modification and repair PF01327 Pep_deformylase, Polypeptide deformylase.. COG0242 Def, N-formylmethionyl-tRNA deformylase [Translation, ribosomal structure and biogenesis]. Translation, ribosomal structure and biogenesis NC_008027 Chromosome PSEEN0026 YP_605837 104779339 Protein 26917 28014 Smf protein, DNA processing chain A Class 3 ATGACCGAACCCCGTTCGTCGCCTTGTTCGCCTGCCGAACTCGAGGCGCGGTTGCGTCTGCATCGGCTTCCCGATGCCGGGCTGCGTCGTTTTCACACCCTCATCGAAGCTTTCGGCAGCGCCTCGTCGGCGCTCACTGCGCCAGCAAGTGCCTGGCGTGCCCTGGGGCTGCCGGCAGCCAGTATCGACGCCCGGCGCAGCCCTGAAGTGCGCGATGGGGCATTGGCCGCAATGGCCTGGTTAGAGCGGCCGGGCCAGCATTTACTGATGTGGGACGAGCCTGGCTACCCGGCGTTGCTGGCCGAGATAGACGATCCGCCGCCCTTGCTGTTCGTCGCTGGAAACCCTGCTTTGCTCGAGCGACCGCAGCTTGCGATTGTGGGCAGCAGGCGTGCTTCACCCCCGGCGCTGGATACGGCGGGCGCGTTTTCCCGTTGCCTTTCCCAGGCCGGGTTCACCATCACCAGCGGGCTGGCGCTGGGCGTGGACGGTGCCGCTCATCGGGCCGCGTTGAAGGCCGGTGGGTACACGATCGGGGTGCTGGGCACGGGGTTGCAAAAATGTTATCCACAGCGCCATCGTGACTTGGCACGGATGATGATCGACAGCGGTAGCGCGCTGGTTTCCGAGTACCCGCTGGACGCCGGGCCGCTGGCGGGTAACTTCCCACGGCGCAATCGGATCATCAGTGGCTTGTCGCTGGGTGTACTGGTGGTCGAGGCCAGCCTGGCCAGCGGCTCGTTGATCACCGCGAGGCTTGCTGCCGAACAGGGGCGGGAGGTGTATGCGATTCCAGGCTCCATCCACCACCCTGGCGTCAAAGGCTGCCACCAGTTGATCCGCGATGGCGCCCTGCTGGTGGAAAGCGTGGAGCAGATCCTCGACAGCCTGGGCGGCTGGCAGAACCTGCCGCCCGCTGTTGTGGATAAACCCGCTCACCCCCTCCTCGCCCTGCTTCATGCCGCGCCCCAGACCAGCGAGGGCCTGGCCCACAGCAGCGGCCTGCCGCTGGCCCAGGTACTGGCCAGCCTGACCGAGCTGGAGCTCGAAGGCCGGGTCAGCAATGAAGCCGGGCGTTGGTTTGCCCGTGCCGGCTAA MTEPRSSPCSPAELEARLRLHRLPDAGLRRFHTLIEAFGSASSALTAPASAWRALGLPAASIDARRSPEVRDGALAAMAWLERPGQHLLMWDEPGYPALLAEIDDPPPLLFVAGNPALLERPQLAIVGSRRASPPALDTAGAFSRCLSQAGFTITSGLALGVDGAAHRAALKAGGYTIGVLGTGLQKCYPQRHRDLARMMIDSGSALVSEYPLDAGPLAGNFPRRNRIISGLSLGVLVVEASLASGSLITARLAAEQGREVYAIPGSIHHPGVKGCHQLIRDGALLVESVEQILDSLGGWQNLPPAVVDKPAHPLLALLHAAPQTSEGLAHSSGLPLAQVLASLTELELEGRVSNEAGRWFARAG inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 5.4 : Genetic exchange, recombination ;function prediction: 5.11 : DNA uptake ;function prediction: 2.1 : DNA related ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ; Unknown Class 3 TIGR00732 dprA DNA protecting protein DprA equivalog 1e-102 Cellular processes DNA transformation PF02481 SMF, SMF family. The SMF family (DNA processing chain A, dprA) are a group of bacterial proteins. In H. pylori, dprA is required for natural chromosomal and plasmid transformation.. COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion]. DNA replication, recombination, and repair / Intracellular trafficking and secretion NC_008027 Chromosome PSEEN0027 YP_605838 104779340 Protein 28054 28611 hypothetical protein Class 4 ATGGTGAGCAGTTGGCGTGTGCAGCAAGCCGCGCGCGAGGTGAAGGCGGGTGCGGTGATCGCCTATCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCGTGGAACGAGGACGCGGTGTATCGCCTGCTGGCGCTCAAGTCGCGGCCTGTGGATAAAGGGCTGATCCTGATCGCCGACAACATCCGCCAGTTCGACTTTCTGTTCGAGGATTTCCCGCAGGATTGGATTGATCGCATGAGCGCTACTTGGCCGGGGCCGAACACCTGGCTGGTGCCGCACCAGGACCTGTTGCCCGAGTGGGTGACCGGGCAGCACGACACCGTGGCGCTGCGGGTCAGCGATCACCCACAGGTGCGCGAGCTGTGCGCGTTGGTCGGGCCGTTGATCTCTACCTCCTGCAACCCGGCCGGGCGGCCGGCGGCCAAGAGTAGGTTGCGGGTGGAGCAGTACTTCCACAACGAGCTGGACATGGTGCTGGGTGGGGCGTTGGGTGGGCGGAAGAACCCGAGCCTGATTCGCGACCTGGCGACCGGCGAGGTTGTGCGCCCGGGCTGA MVSSWRVQQAAREVKAGAVIAYPTEAVWGLGCDPWNEDAVYRLLALKSRPVDKGLILIADNIRQFDFLFEDFPQDWIDRMSATWPGPNTWLVPHQDLLPEWVTGQHDTVALRVSDHPQVRELCALVGPLISTSCNPAGRPAAKSRLRVEQYFHNELDMVLGGALGGRKNPSLIRDLATGEVVRPG inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 4 : Homologs of previously reported genes of unknown function ; Unknown Class 3 TIGR00057 TIGR00057 Sua5/YciO/YrdC/YwlC family protein hypoth_equivalog 6.1e-16 Unknown function General PF01300 Sua5_yciO_yrdC, yrdC domain. This domain has been shown to preferentially bind to dsRNA. The domain is found in SUA5 as well as HypF and YrdC.. COG0009 SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]. Translation, ribosomal structure and biogenesis NC_008027 Chromosome PSEEN0028 YP_605839 104779341 Protein 29068 29379 hypothetical protein Class 4 ATGACCAAAAAGATTGTCCCCGATCCACCACTTCCTAACACCACAACTCACCCCTTCGGCCGCTGCGACGCCGGCCACCCTCCACTCTTCACCGTAAACCCCAACATCGAAGCCCACGACGCCCTGGTACACGTAGCGCTCTACCTGCGCTGTGCCTACGACACCGGCATCAAGGCACTCGACCACCTGCGCGACGAGGGGCGTGGCATGTACTGGTCGAGCCTGCATTCGCTGGAAATGGCGGAGGGGTTGGTGGAGGCGATGCTCGATGGCATCGAGTCCGCGCCGGCAGCCGATAGGCCTGTTGGCTGA MTKKIVPDPPLPNTTTHPFGRCDAGHPPLFTVNPNIEAHDALVHVALYLRCAYDTGIKALDHLRDEGRGMYWSSLHSLEMAEGLVEAMLDGIESAPAADRPVG inference: ab initio prediction:AMIGene:2.0 ;Evidence 4 : Homologs of previously reported genes of unknown function ;inference: non-experimental evidence, no additional details recorded ; Cytoplasmic Class 3 NC_008027 Chromosome PSEEN0029 YP_605840 104779342 Protein 30454 29477 qor quinone oxidoreductase, NADPH-dependent Class 2 ATGGCCAAGCGTATCCAGTTCAGCCAGCATGGCGGCCCGGAAGTCCTGCAACTGGTGGAGTTCGACCCGGCACCGCCCGGCCCGCAGCAGGTGCGGGTGCGTAACCATGCGATCGGTTTGAACTTCATCGACACCTATTTCCGCAGCGGGCTGTATGCGCCGCCAGCTCTACCTTCCGGGCTGGGCACTGAAGCGGCCGGCGTGGTCGAGGCGGTGGGCGAGGGTGTCAGCCGGATCAAGGTCGGCGACCGCGTGGCGTACGCCGGTGGGCCGCTTGGGGCCTACAGCGAGGTGCATACGTTGCCAGAGGCCAATCTGGTGAAGCTGCCCGAAGCGATCAGCTTCGAACAGGCGGCGGCGGTGATGCTCAAGGGGCTGACCACGCAATACCTGCTCAAGCAGACCTATGCCGTGCAGCCGGGGGACTTCGTGCTGTTCCATGCCGCCGCTGGCGGTGTGGGCTCGCTGGCGTGCCAGTGGGCCAAGGCGCTGGGCGCGAAGCTGATCGGCACCGTGAGTTCTCCTGAGAAAGCCGAACGGGCCAAGGCGCTCGGGGCCTGGGCGACCATCGACTACAGCCAAGAAGACGTGGCCAAGCGTGTGCTGGAACTGACCGACGGTCAAAAGTGCTCGGTGGTGTATGACGGCGTGGGGGCGGATACCTGGCTGACCTCGCTGGATTGCCTGAGGCCGCGAGGGTTGATGGTGAGCTTCGGCAATGCCTCCGGCGCGGTGAGCGGGGTCAACTTGGGGATCCTGTCGCAAAAGGGGTCGTTGTATGTCACCCGGCCGACACTGGGGAGCTACGCCAACAATGCCGAGAACACCCAGGCCATGGCCGATGACCTGTTCGCGATGATCGCCAGTGGCAAGCTGGTTGTGGATATCCAGCAGCGGTATCCGTTGAGCGAGGCGGCCAAGGCGCAGGCGGAGTTGTCGGCGCGGCGGACGGTCGGCTCGACTGTTTTGCTGCCTTGA MAKRIQFSQHGGPEVLQLVEFDPAPPGPQQVRVRNHAIGLNFIDTYFRSGLYAPPALPSGLGTEAAGVVEAVGEGVSRIKVGDRVAYAGGPLGAYSEVHTLPEANLVKLPEAISFEQAAAVMLKGLTTQYLLKQTYAVQPGDFVLFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAERAKALGAWATIDYSQEDVAKRVLELTDGQKCSVVYDGVGADTWLTSLDCLRPRGLMVSFGNASGAVSGVNLGILSQKGSLYVTRPTLGSYANNAENTQAMADDLFAMIASGKLVVDIQQRYPLSEAAKAQAELSARRTVGSTVLLP inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.4.3 : Electron carrier ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ; 1.6.5.5 ; Unknown Class 3 TIGR01751 crot-CoA-red crotonyl-CoA reductase No data 2.6e-10 No data No data PF00107PF08240 ADH_zinc_N, Zinc-binding dehydrogenase..ADH_N, Alcohol dehydrogenase GroES-like domain. This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure.. COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]. Energy production and conversion / General function prediction only NC_008027 Chromosome PSEEN0030 YP_605841 104779343 Protein 30587 31498 hemF coproporphyrinogen III oxidase Class 2 ATGACCAGCCGCACCGAGGCCGTAAAAGCCTACCTGCTCGACCTGCAAGACCGCATCTGCTCTGCCCTCGAAACCGAAGACGGCGGCGCCCGCTTCGTCGAGGATGCCTGGGTGCGCGATGCCGGTGGCGGCGGTCGCACGCGGGTGATCGGCGAGGGCAAGGTGATCGAGAAAGGCGGGGTGAACTTCTCCCACGTGTTCGGCGCCGGCCTGCCACCGTCGGCCAGTGCCCACCGCCCGGAGCTGGCGGGCCGTGGCTTCGAGGCCCTGGGCGTGTCGCTGGTGATCCACCCGCACAACCCGCACGTACCGACTTCCCACGCCAACGTGCGCTTCTTCATCGCCGAAAAAGAAGGCGAAGAGGCCGTGTGGTGGTTCGGCGGCGGCTTCGACCTGACCCCGTACTACGGCAACGAGGAAGATTGCGTCCACTGGCACCGCGTTGCCGAACAGGCCTGCGCGCCGTTCGGCGCCGATGTCTATCCACGCTACAAGGCCTGGTGCGACCGCTACTTCCACCTCAAGCACCGTGGCGAGCCGCGCGGCATTGGCGGCCTGTTCTTCGATGACCTGAACGAGTGGGACTTCGACACCTGCTTCGCCTTCATGCGCGCCATCGGCGACGCCTACGTCGACGCCTACCTGCCGATCATCCAGCGCCGCAAGGACACGCCGTATACCGCCAAGCAGCGTGAATTCCAGGAATACCGCCGTGGCCGCTACGTTGAGTTCAACCTGGTCTACGACCGTGGCACGCTGTTCGGTTTGCAGTCCGGTGGCCGCACCGAGTCGATCCTGATGTCGCTGCCGCCGCAGGTACGTTGGGGATACGATTGGAAAGCCGAGCCTGGCAGCGAGGAAGCGCGCCTGACCGACTATTTCCTGCAGGACCGCGACTGGCTCGCCCAGTAA MTSRTEAVKAYLLDLQDRICSALETEDGGARFVEDAWVRDAGGGGRTRVIGEGKVIEKGGVNFSHVFGAGLPPSASAHRPELAGRGFEALGVSLVIHPHNPHVPTSHANVRFFIAEKEGEEAVWWFGGGFDLTPYYGNEEDCVHWHRVAEQACAPFGADVYPRYKAWCDRYFHLKHRGEPRGIGGLFFDDLNEWDFDTCFAFMRAIGDAYVDAYLPIIQRRKDTPYTAKQREFQEYRRGRYVEFNLVYDRGTLFGLQSGGRTESILMSLPPQVRWGYDWKAEPGSEEARLTDYFLQDRDWLAQ inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.5.3.12 : Heme, porphyrin ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ; 1.3.3.3 ; Cytoplasmic Class 3 PF01218 Coprogen_oxidas, Coproporphyrinogen III oxidase.. COG0408 HemF, Coproporphyrinogen III oxidase [Coenzyme metabolism]. Coenzyme metabolism NC_008027 Chromosome PSEEN0031 YP_605842 104779344 Protein 31503 32348 aroE shikimate 5-dehydrogenase Class 2 GTGGATAACCGAGGAGCCCCCATGGACCAGTACGTCGTATTCGGCAACCCCATCGGCCACAGCAAGTCGCCGCTGATCCACCGCCTGTTCGCCGACCAGACCGGCCAGGACCTGGAGTACGCCACCCTGCTCGCGCCGCTGGACGAGTTCAGTGACTGCGCCACAGGCTTCTTCAAGCAAGGCAGCGGCGCCAACGTCACCGTACCGTTCAAGGAAGAGGCCTATCGCTTGTGTGACAGCCTTACCCCAAGGGCACAGCGTGCAGGCGCGGTGAATACCCTGACCAAGCTGGCCGACGGCACCCTGCAGGGTGACAACACCGACGGCGCGGGGCTGGTGCGGGACCTGACGGTAAACGCCGGGGTGACCTTGGCGGGCAAGCGCATCCTTATCCTTGGCGCCGGTGGCGCGGTACGCGGTGTGCTGGAGCCGATCCTGGCGCACAACCCGCAATCGCTGGTGATCGCCAACCGTACCGTTGAGAAAGCCGAGCAGCTGGCGCGGGAGTTCGATGAACTTGGGCCGGTGGTGGCCAGTGGTTTCAGCTGGTTGCAGGAGCCGGTGGACGTGATCATCAATGCCACCTCGGCGAGCCTGGCCGGCGAGTTGCCGCCGATTGCCGACAGCCTGGTCGAGGCGGGGCGCACGGTCTGCTACGACATGATGTATGGCAAGGAGCCGACGCCTTTCTGCCAGTGGGCGAGCAAGCTGGGGGCGGCCAAGGTGCTTGATGGGCTGGGGATGCTGGCCGAGCAGGCAGCCGAGGCGTTCTTTATCTGGCGGGGGGTGCGTCCGGACACGGCGCCTGTGCTGGATGAACTGCGTCGGCAATTGGCGCGCAGTTGA MDNRGAPMDQYVVFGNPIGHSKSPLIHRLFADQTGQDLEYATLLAPLDEFSDCATGFFKQGSGANVTVPFKEEAYRLCDSLTPRAQRAGAVNTLTKLADGTLQGDNTDGAGLVRDLTVNAGVTLAGKRILILGAGGAVRGVLEPILAHNPQSLVIANRTVEKAEQLAREFDELGPVVASGFSWLQEPVDVIINATSASLAGELPPIADSLVEAGRTVCYDMMYGKEPTPFCQWASKLGAAKVLDGLGMLAEQAAEAFFIWRGVRPDTAPVLDELRRQLARS inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.5.1.20 : Chorismate ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ; 1.1.1.25 ; Cytoplasmic Class 3 GO:0009423 ; TIGR00507 aroE shikimate 5-dehydrogenase equivalog_domain 5.7e-102 1.1.1.25 Amino acid biosynthesis Aromatic amino acid family PF08501PF01488 Shikimate_dh_N, Shikimate dehydrogenase substrate binding domain. This domain is the substrate binding domain of shikimate dehydrogenase..Shikimate_DH, Shikimate / quinate 5-dehydrogenase. This family contains both shikimate and quinate dehydrogenases. Shikimate 5-dehydrogenase catalyses the conversion of shikimate to 5-dehydroshikimate. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites 3-dehydroquinate and dehydroshikimate.. COG0169 AroE, Shikimate 5-dehydrogenase [Amino acid transport and metabolism]. Amino acid transport and metabolism NC_008027 Chromosome PSEEN0032 YP_605843 104779345 Protein 34232 32667 sulfate transporter Class 3 ATGCCCCGTCCACACCACCTGCTGCCCTTCCTCGCCTGGCTCCCCCGCCAATCGGGTCGCAGCCTGCGCCAGGACCTGCTGGTAGGCCTGAGCGGCGCCATCCTCGCCCTGCCGCAATCGATCGCCTACGCCCTGATCGCCGGCCTGCCCGCCGAATACGGCCTGTACGCCGCCATCGTGCCGGTGCTGGTCGCCTGCCTGTGGGGCTCGTCCTGGCACCTGATCTGCGGCCCCACCGCCGCCATTTCCATCGTCCTCTATGCCAGCATCAGCCCACTGGCCGTGGCCGGCAGCGCCGACTACGTGACCCTGGTGCTGCTGCTGACCTTCCTCGGCGGCGTCTTCCAGCTCATGCTGGGGCTGCTGCGCTTCGGCGCGCTGGTCAACTTCGTCTCCCATTCGGTGGTGCTGGGCTTCACCCTCGGTGCTGCCATCGTCATCGCGCTGGGGCAACTGCCCAATCTGCTGGGCCTGGACCTGCCAAGCCAGGCCACGGCTCTGAAGACCGTGCAGGAACTGACCGGCCATGTTGGTGAGGTGGACATGCCATCGCTGATTCTGGGACTGAGCACCCTGGTGATTGGCGTGGTGTTGAAGCTATGGCGCCCGCGCTGGCCGAGCCTGTTGATAAGTTTGCTGCTGGTCAGCCTGGCGGCCTGGCTGTTGCCCGGCGTGTTCGGCCATGTACCACGCGTGCCCGCTTTCGTCGGCCAGTTGCCACCGCTCAGCCCGCTGCCGTTACTCGATGTGGAACTTATCCTGCGCCTGCTGCCCAGTGCCGTGGCTGTCGGCATGCTCGGGCTGGTCACCAGCCTGTCCATCGCCCGTTCCCTGTCCGCCCGTTCCGAGCAACTGATCGACGCCAACCAGGAGATCCGCGCCCAGGGCCTGTCGAACATCGTCGGGGCATTGTTCTCCGGCTATCTGTCCTCCGGCTCCTTTACCCGCTCCGGGCTCAGCTACGACGCAGGCGCCCGCTCGCCATTGGCCGGAGTGTTCTCGGCGCTGTGGGTGACGCTGTTCGCGGTCGCTGGTGCCGGGCTGATCGCTCATCTGCCGATCCCGGCGATGGCGGGCAGCATCCTACTGATCTGCTGGGGGCTGGTGGACCATCGCGGCATCCGCGCGCTGTTCCGGGTCAGCCGTTCGGAGTTCCTGGTAATGGCGCTGACCGCCGCCGCGACGCTGCTGCTGGAGCTGCAAACGGCGATCTACGCCGGGGTGCTGGCATCGCTGTTCTTCTACCTCAAGCGCACTTCGCGGCCACGGGTGCAGCAGAGCCGGGAAGGGGAGGCGGATGTGTTGCGGGTGGGCGGGTCGATCTTCTTCGGCGCGGCGCATTACCTGCAGGTGCGCTTGCAGCGCTGCCAGGGGCCGCATGTGGTGATCGATGCGCGGCAGGTGAACTTCATCGATTACTCGGGTGTGGATATGTTGCACCGCGAGGCGCGGCGGTTGCTGCGCAATGGCGGGAGCCTGACATTGCGGCGAGCGCGGCCGCAGGTGATAGAGGAACTGCAGAAGCTGGAAGGCCTGGCGAGCTGCCCAATACGCTTCGAGGGCTGA MPRPHHLLPFLAWLPRQSGRSLRQDLLVGLSGAILALPQSIAYALIAGLPAEYGLYAAIVPVLVACLWGSSWHLICGPTAAISIVLYASISPLAVAGSADYVTLVLLLTFLGGVFQLMLGLLRFGALVNFVSHSVVLGFTLGAAIVIALGQLPNLLGLDLPSQATALKTVQELTGHVGEVDMPSLILGLSTLVIGVVLKLWRPRWPSLLISLLLVSLAAWLLPGVFGHVPRVPAFVGQLPPLSPLPLLDVELILRLLPSAVAVGMLGLVTSLSIARSLSARSEQLIDANQEIRAQGLSNIVGALFSGYLSSGSFTRSGLSYDAGARSPLAGVFSALWVTLFAVAGAGLIAHLPIPAMAGSILLICWGLVDHRGIRALFRVSRSEFLVMALTAAATLLLELQTAIYAGVLASLFFYLKRTSRPRVQQSREGEADVLRVGGSIFFGAAHYLQVRLQRCQGPHVVIDARQVNFIDYSGVDMLHREARRLLRNGGSLTLRRARPQVIEELQKLEGLASCPIRFEG inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 4.2.A.53 : The Sulfate Permease (SulP) Family ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ; Cytoplasmic Membrane Class 3 GO:0016020 ; TIGR00815 sulP sulfate permease subfamily 8.5e-98 Transport and binding proteins Anions PF00916PF01740 Sulfate_transp, Sulfate transporter family. Mutations in human diastrophic dysplasia protein lead to several diseases..STAS, STAS domain. The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C terminal region of Sulphate transporters and bacterial antisigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.. COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]. Inorganic ion transport and metabolism NC_008027 Chromosome PSEEN0033 YP_605844 104779346 Protein 35306 34383 glycine betaine-binding protein Class 3 ATGCAGAAGTTCTCCACCGCCGTGCTCGCCCTGGCCCTGAGCCTGGGCACGGCCCACGCCGCCGACGGCAACGTGCAATGCAGCACCGTGAAACTGGCCGACCCTGGCTGGAGCGATATCGCCAGTACCAACGCCGTCGCTCGCCTGCTCCTGGAAAACCTGGGCTACCAGGTGAAGATCGACAGCCTGGCCGTGCCGATAATCTACGGCGGCCTGAAGGACGGCCGGGTGGACGCCTTTCTCGGCAACTGGATGCCGGCGCAGCAGGGCTTTCATGACAAATTCATCGCCAATGGCGACGTGCAGCAGCTGGCGCGCAACCTGGAGGGCACCGAGTTCACCCTGGCGGTGCCCGATTATGTGTGGGAAGCCGGCGTGAAGGACTTCGCCGACCTGCACAAGTACGCTGACAAGTTCGACAAGAAGCTCTACGGCATCGGCTCCGGCGCGCCGGCCAACCTGTCGCTGAAGGAGATCATCGACAAGAACGACTTCGCGCTTGGGCAGTGGAAGCTGGTCGAATCCAGCGAGCAGGCGATGCTGGCCCAGGTGGACCGGGCGGTGAAAAAGCAGCAGTTCATCACCTTCCTGGGCTGGACCCCGCATCCGATGAACGTGAAGTTGAAGATGCATTACCTCACGGGTGGCGAACAATGGTTTGGCAGCAAAGGCGATGTGTACACGCTGACCCGCAAGGGCTATCCACAGGCTTGCCCGAATGCAGCGAAGTTGCTGAGCAACCTGACGTTCACGCTGGAGATGGAGAACAGCATCATGGCCGAGGTTGTGGATAAGAAGGTGAGCTTTGATGAAGCGGCCAGGAGGTGGGTGAAGGCTCATCCGGAATTGCTGGACGGTTGGCTGGCCGGAGTGACCTCCAAGGACGGTGGAGATGCATCAGAAGTGCTCAAGGCCAAGCTCTGA MQKFSTAVLALALSLGTAHAADGNVQCSTVKLADPGWSDIASTNAVARLLLENLGYQVKIDSLAVPIIYGGLKDGRVDAFLGNWMPAQQGFHDKFIANGDVQQLARNLEGTEFTLAVPDYVWEAGVKDFADLHKYADKFDKKLYGIGSGAPANLSLKEIIDKNDFALGQWKLVESSEQAMLAQVDRAVKKQQFITFLGWTPHPMNVKLKMHYLTGGEQWFGSKGDVYTLTRKGYPQACPNAAKLLSNLTFTLEMENSIMAEVVDKKVSFDEAARRWVKAHPELLDGWLAGVTSKDGGDASEVLKAKL inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 4.3.A.1.p : periplasmic binding component ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ; Unknown Class 3 PF04069 OpuAC, Substrate binding domain of ABC-type glycine betaine transport system. Part of a high affinity multicomponent binding-protein-dependent transport system involved in bacterial osmoregulation. This domain is often fused to the permease component of the transporter complex. Family members are often integral membrane proteins or predicted to be attached to the membrane by a lipid anchor. Glycine betaine is involved in protection from high osmolarity environments for example in Bacillus subtilis. The family member OpuBC is closely related, and involved in choline transport. Choline is necessary for the biosynthesis of glycine betaine. L-carnitine is important for osmoregulation in Listeria monocytogenes. Family also contains proteins binding l-proline (ProX), histidine (HisX) and taurine (TauA).. COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components [Amino acid transport and metabolism]. Amino acid transport and metabolism NC_008027 Chromosome PSEEN0034 YP_605845 104779347 Protein 36838 35321 betC choline sulfatase Class 2 ATGAAACAACCCAACATCCTGTTCATCATGGCCGACCAGATGGCCGCGCCGCTGCTGCCGATCTACACCCCATCGCCGATCAAGATGCCCAACCTGGCGCGCCTCGCCGAGCAGGCCGTGGTGTTCGACTCCGCCTACTGCAACAGCCCGCTGTGCGCGCCCTCGCGCTTCACCCTGGTCAGCGGCCAGTTGCCCAGCCGCATCGGCGCCTACGACAACGCCGCCGACTTTCCTGCCGACATTCCGACTTACGCCCACTACCTGCGCCGCCTCGGCTACCGCACCGCGCTCTCGGGCAAGATGCACTTCTGCGGCCCGGACCAGCTGCACGGCTACGAGGAGCGCCTGACCAGCGACATCTACCCGGCCGACTACGGCTGGGCGGTGAACTGGGACGCGCCAGACCAACGCCCGAGCTGGTACCACAACATGTCCTCGGTGCTGCAGGCCGGGCCGTGCGTACGCACCAACCAGCTGGATTTCGATGAGGAAGTGGTGTTCAAGGCACGCCAGTATCTCTACGACCATGTGCGCGAAGACCATGGCCGGCCTTTCTGCCTGACCGTGTCGATGACCCACCCCCACGACCCGTACACCATCCCCAAACGCTACTGGGATCTCTACGAGGCTGTGGATATCCCGCTGCCCCGCGACGTGATCGCCCAAAGCCAGCAAGACCCGCATTCGCAACGCCTGCTCAAGGTCTACGACCTGTGGGACAAGCCGCTGCCCGTGGACAAGATCCGCGATGCCCGCCGCGCCTACTTCGGCGCCTGCAGCTACATCGACGACAATATCGGCCTGCTTGTGCAGACGCTGGAAGACTGCGGCCTGGCCGACGACACCCTGATCGTCTTCTCCGGCGACCACGGCGACATGCTTGGCGAGCGAGGGCTCTGGTACAAGATGCACTGGTTCGAGATGTCGGCGCGGGTGCCGCTGCTGATCCACGCGCCCAAGCGCTTCGCACCCGCGCGGATCAGCGCCAGCGTATCCACCTGCGACCTGCTGCCGACCCTGGTCGAACTGGCCGGCGGCGCTGTGGATAAAGACCTGCACCTGGACGGCCGCTCACTGCTCGGGCACCTGCAAGGGCAGGGCGGGCATGACGAGGTGATCGGCGAATACATGGCCGAGGGTACCGTCGGCCCGCTGATGATGATCCGCCGCGGCGCCTACAAGTTCGTGTACAGCGAAGACGACCCCTGTTTACTCTACGACCTGAGCCGCGACCCGCACGAGCGGGAGAACCTCACCGGCAGCCCGGACCACCAGGTGCTGCTGCAGGCATTTGTCGATGAAGCGAAGCAACGCTGGGATATCCCCAGCCTGCGCCAGCAGGTGCTGGCCAGCCAGCGCCGCCGCCGCCTGGTGGCCGAGGCGCTGGCCATCGGCACGCTGAAAAGCTGGGACCACCAACCCTTGGTGGACGCCAGCCAACAGTACATGCGCAACCACATCGATCTCGACGACCTCGAGCGCAAGGCACGTTATCCACAGCCCGCACCCCTGGATTGA MKQPNILFIMADQMAAPLLPIYTPSPIKMPNLARLAEQAVVFDSAYCNSPLCAPSRFTLVSGQLPSRIGAYDNAADFPADIPTYAHYLRRLGYRTALSGKMHFCGPDQLHGYEERLTSDIYPADYGWAVNWDAPDQRPSWYHNMSSVLQAGPCVRTNQLDFDEEVVFKARQYLYDHVREDHGRPFCLTVSMTHPHDPYTIPKRYWDLYEAVDIPLPRDVIAQSQQDPHSQRLLKVYDLWDKPLPVDKIRDARRAYFGACSYIDDNIGLLVQTLEDCGLADDTLIVFSGDHGDMLGERGLWYKMHWFEMSARVPLLIHAPKRFAPARISASVSTCDLLPTLVELAGGAVDKDLHLDGRSLLGHLQGQGGHDEVIGEYMAEGTVGPLMMIRRGAYKFVYSEDDPCLLYDLSRDPHERENLTGSPDHQVLLQAFVDEAKQRWDIPSLRQQVLASQRRRRLVAEALAIGTLKSWDHQPLVDASQQYMRNHIDLDDLERKARYPQPAPLD inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.8.2 : Sulfur metabolism ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ; 3.1.6.6 ; Cytoplasmic Class 3 PF00884 Sulfatase, Sulfatase.. COG3119 AslA, Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism]. Inorganic ion transport and metabolism NC_008027 Chromosome PSEEN0035 YP_605846 104779348 Protein 36948 37844 transcriptional regulator, LysR family Class 3 ATGTTTGAGCACCTTGCCGACCTGTCCCTCGATGCCTTGCGCGTGTTCGAGGCCGCCGCACGTCTGCGCGGCTTTACCGCTGCCGCCGTGGAGCTGGGCACCACGCAGCCGGCGGTGAGCCAGCAGGTAAAGCGCCTGGAGGCGCAGTTGGGAACGCGGTTGTTCGACCGTATCTACCGGGGCATCGAGCTGACCGAAGCGGGCCAGCTGCTGTTCGAACAGGTACATCAGGGGTTGCAGGCCATGGATGATGGTGTTGCCCAGGCCAGTGGTCGTGGGCAGCGCGAGGTGTTGCAGGTGGCCACCGACTTCGCCTTTGCCGCGTTCTGGCTAATGCCGCGCTTGCAGCGTTTTCACGAGGCCAATCCACAGGTGGACGTGAGCCTGGTGACCGGCGAGCGCAGCCAGGGGATGTTGCGCCCGGACATCGATGTGGCGGTGCTGTTTGGCGATGGGCGTTTCCATCAGGGCGAGAGCCGCTGGTTGTTTGACGAGGAGGTCTTCCCGGTCTGCAGCCCACGGCTGATTCATGGCAAACCCTTGTCAGCCGTGGCTTTGCAACGATTGCCGTTGCTGCATCTGAAGGGTGAGCAGGCCAGTCGCTGGTTCGATTGGGCGGGGGTGTTTCGGGGGCTTGGCGTGGACAGCCCTCCTCCGTCCGGGCAACTGCGGTTCGATAACTACACGCTGCTGATTCAGGCGGCGATTGCCGGGCAAGGCGTGGCGATTGGCTGGGCACACCTGGTCGATGGGCTGGTCGAGCAAGGGTTGTTGTGTCGGCCTATGGAAGGCAGTTTGCGGTCGGCGCGGGGGTACTACGTGGTGCTGCCGCAGCGCAAACGGCGTGGGGCGCTGATCCATCGGTTCGTGGATTGGCTGGAGCATGAGCGCCTGTAG MFEHLADLSLDALRVFEAAARLRGFTAAAVELGTTQPAVSQQVKRLEAQLGTRLFDRIYRGIELTEAGQLLFEQVHQGLQAMDDGVAQASGRGQREVLQVATDFAFAAFWLMPRLQRFHEANPQVDVSLVTGERSQGMLRPDIDVAVLFGDGRFHQGESRWLFDEEVFPVCSPRLIHGKPLSAVALQRLPLLHLKGEQASRWFDWAGVFRGLGVDSPPPSGQLRFDNYTLLIQAAIAGQGVAIGWAHLVDGLVEQGLLCRPMEGSLRSARGYYVVLPQRKRRGALIHRFVDWLEHERL inference: non-experimental evidence, no additional details recorded ;inference: ab initio prediction:AMIGene:2.0 ;function prediction: 3.1.2 : Transcriptional level ;function prediction: 2.2.2 : Transcription related ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ; Cytoplasmic Class 3 TIGR02036 dsdC D-serine deaminase transcriptional activator equivalog 1.4e-16 Regulatory functions DNA interactions PF03466PF00126 LysR_substrate, LysR substrate binding domain. The structure of this domain is known and is similar to the periplasmic binding proteins..HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family.. COG0583 LysR, Transcriptional regulator [Transcription]. Transcription NC_008027 Chromosome PSEEN0036 YP_605847 104779349 Protein 37975 38307 hypothetical protein Class 4 GTGCAAAGGATCAAGGGCTATCACGCCCACGTGTACTACGACGCATCGACCATGGAACAGGCCCGTGAGCTGTGCGAGGAGGCGACGCGGCTGTTCCCCGTGACCATGGGGCGCATGCACCAGAAGCCGGTCGGGCCGCACCCGGACTGGAGCTGTCAGCTGGCCTTCGGGCCGGAGGTGGTGGGTGTGGTGTTGCCGTGGCTGGCGCTGTATCGCAAGGGGCTGGTGGTGTTCCTGCACCCGGAAACCGGGGATGAGCTGGCGGATCACCGCGATCATGCGATCTGGATGGGAGCGATCAGGCCGTTGGATCTTTCGATCTTCGAAGGTTAG MQRIKGYHAHVYYDASTMEQARELCEEATRLFPVTMGRMHQKPVGPHPDWSCQLAFGPEVVGVVLPWLALYRKGLVVFLHPETGDELADHRDHAIWMGAIRPLDLSIFEG inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 4 : Homologs of previously reported genes of unknown function ; Cytoplasmic Class 3 PF08883 DOPA_dioxygen, Dopa 4,5-dioxygenase family. This family of proteins are related to a DOPA 4,5-dioxygenase that is involved in synthesis of betalain. DOPA-dioxygenase is the key enzyme involved in betalain biosynthesis. It converts 3,4-dihydroxyphenylalanine to betalamic acid, a yellow chromophore.. COG3805 DodA, Aromatic ring-cleaving dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism]. Secondary metabolites biosynthesis, transport, and catabolism NC_008027 Chromosome PSEEN0037 YP_605848 104779350 Protein 39217 38408 trpA tryptophan synthase alpha subunit Class 2 ATGAGCCGTCTCGAACAACGCTTCGCCGAATTGAAGGCCGAAGGCCGCTCCGCCCTGGTCACCTTCGTCACCGCCGGCGACCCGGGCTACGACGCCTCGCTGGAGATCCTCAAGGGCCTGCCGGCCGCTGGCGCCGATGTGATCGAACTGGGCATGCCGTTCACCGACCCGATGGCCGACGGCGTCGCTATCCAGCTCGCCACCCTGCGTGCCCTGGAAGCCGGTCAGACACTGGCCAAGACCCTGCAGATGGTTCGCGAATTCCGTGTCGGCAACCAGACCACGCCCATCGTGCTGATGGGTTACTACAACCCGATCCACCGTTTCGGCGTTGAGCAGTTCGTCGCCGAGGCGAAAGAGGCGGGCGTAGACGGCCTGATCATCGTCGACCTGCCTCCGGAGCACGACGCCGAACTGGCCACCCCAGCCCAGGCCGCAGGCATCGACTTCATCCGCCTGACCACCCCGACTACCGACGATGCGCGCCTGCCGCGCGTGCTGGAGCGCAGCTCCGGGTTCGTCTACTACGTGTCGGTGGCCGGGGTGACCGGTGCGGGCTCGGCGACCACCGAACATGTGACCGAAGCCATTGCGCGCCTGCGCCGGCATACCGACCTGCCGATCAGCGTCGGTTTCGGCATCCGCACACCGGAGCAGGCTGCTGCCATTGCCCGCCTGGCTGATGGCGTGGTGGTCGGTTCGGCGCTGGTCGACAAGATCGCCCAGGCCAAGGATGCCGGCCAGGCGGTGAAGGATGTGTTGAGCCTGTGCTCGGCGCTGGCCGACGGCGTACGCGCCGCTCGCGTCTGA MSRLEQRFAELKAEGRSALVTFVTAGDPGYDASLEILKGLPAAGADVIELGMPFTDPMADGVAIQLATLRALEAGQTLAKTLQMVREFRVGNQTTPIVLMGYYNPIHRFGVEQFVAEAKEAGVDGLIIVDLPPEHDAELATPAQAAGIDFIRLTTPTTDDARLPRVLERSSGFVYYVSVAGVTGAGSATTEHVTEAIARLRRHTDLPISVGFGIRTPEQAAAIARLADGVVVGSALVDKIAQAKDAGQAVKDVLSLCSALADGVRAARV inference: non-experimental evidence, no additional details recorded ;inference: ab initio prediction:AMIGene:2.0 ;function prediction: 1.5.1.15 : Tryptophan ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ; 4.2.1.20 ; Cytoplasmic Class 3 GO:0004834 ; TIGR00262 trpA tryptophan synthase, alpha subunit equivalog 5.4e-80 4.2.1.20 Amino acid biosynthesis Aromatic amino acid family PF00290PF01884 Trp_syntA, Tryptophan synthase alpha chain..PcrB, PcrB family. This family contains proteins that are related to PcrB. The function of these proteins is unknown.. COG0159 TrpA, Tryptophan synthase alpha chain [Amino acid transport and metabolism]. Amino acid transport and metabolism NC_008027 Chromosome PSEEN0038 YP_605849 104779351 Protein 40431 39214 trpB tryptophan synthase beta subunit Class 2 ATGACCCAGACCCAATACCGCGCCGGCCCCGATGCCAACGGCCTGTTCGGCTCGTTCGGCGGCCGCTACGTGGCCGAAACCCTGATGCCCCTGGTGCTGGACCTGGCCCGCGAATACGAAGCCGCCAAGGCCGACCCCAAGTTCCTCGAAGAACTCGCCTACTTCCAGCGCGACTACATCGGCCGCCCCAACCCGCTGTACTTCGCCGAGCGCCTGACCGAGCACTGCGGCGGCGCGAAGATCTTCTTCAAGCGTGAAGAGCTCAACCACACCGGCGCGCACAAGGTGAACAACTGCATCGGCCAGGTGCTGCTGGCCAAGCGCATGGGCAAGAAACGCCTGATCGCCGAGACCGGCGCCGGCATGCACGGTGTGGCCACCGCCACCGTCGCCGCGCGCTTCGGCCTGCCTTGCGTGATCTACATGGGTGCCACCGACATTGAGCGCCAGCAGGCCAACGTGTTCCGCATGAAGCTGCTGGGCGCCGAGATCGTCCCGGTCACCGCCGGCACCGGCACCCTCAAGGACGCCATGAACGAGGCCCTGCGCGACTGGGTCACCAACGTCGAGGACACCTTCTACCTGATCGGCACCGTGGCCGGCCCGCACCCGTACCCGGCGATGGTCCGCGACTTCCAGTCGATCATCGGCAAGGAAACCCGCGCCCAGCTGCAGGAGAAGGAAGGGCGCCTGCCCGACAGCCTGATCGCCTGCGTCGGCGGCGGCTCCAATGCCATGGGCCTGTTCCACGACTTCCTCGATGATGCCAGTGTGCAGATCATCGGCGTCGAAGCCGGCGGTCACGGCGTGCACACCGACAAGCACGCGGCCAGCCTCAACGGCGGCGTGCCGGGCGTACTGCACGGCAACCGCACCTACCTGCTGCAGGACGACGACGGCCAGATCACCGACGCCCACTCGATCTCGGCAGGCCTGGACTACCCTGGCATCGGCCCGGAGCACGCCTACCTGCATGAAGTGAAGCGTGTGGAGTACGTCAGCATCACCGACGACGAAGCACTCGACGCCTTCCACGCCACCTGCCGCCTGGAAGGCATCATCCCGGCGCTGGAAAGCTCCCACGCCCTGGCCGAGGCGATCAAGCGCGCGCCGAAGCTGCCCAAGGACCACCTGATGGTGATCTGCCTGTCCGGTCGCGGCGACAAGGACATGCAAACCGTGATGAACCACATGGCCGCCCAGGAGAAACAGGCATGA MTQTQYRAGPDANGLFGSFGGRYVAETLMPLVLDLAREYEAAKADPKFLEELAYFQRDYIGRPNPLYFAERLTEHCGGAKIFFKREELNHTGAHKVNNCIGQVLLAKRMGKKRLIAETGAGMHGVATATVAARFGLPCVIYMGATDIERQQANVFRMKLLGAEIVPVTAGTGTLKDAMNEALRDWVTNVEDTFYLIGTVAGPHPYPAMVRDFQSIIGKETRAQLQEKEGRLPDSLIACVGGGSNAMGLFHDFLDDASVQIIGVEAGGHGVHTDKHAASLNGGVPGVLHGNRTYLLQDDDGQITDAHSISAGLDYPGIGPEHAYLHEVKRVEYVSITDDEALDAFHATCRLEGIIPALESSHALAEAIKRAPKLPKDHLMVICLSGRGDKDMQTVMNHMAAQEKQA inference: non-experimental evidence, no additional details recorded ;inference: ab initio prediction:AMIGene:2.0 ;function prediction: 1.5.1.15 : Tryptophan ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ; 4.2.1.20 ; Cytoplasmic Class 3 GO:0004834 ; TIGR00263 trpB tryptophan synthase, beta subunit equivalog 3.9e-287 4.2.1.20 Amino acid biosynthesis Aromatic amino acid family PF00291 PALP, Pyridoxal-phosphate dependent enzyme. Members of this family are all pyridoxal-phosphate dependent enzymes. This family includes: serine dehydratase EC:4.2.1.13 P20132, threonine dehydratase EC:4.2.1.16, tryptophan synthase beta chain EC:4.2.1.20, threonine synthase EC:4.2.99.2, cysteine synthase EC:4.2.99.8 P11096, cystathionine beta-synthase EC:4.2.1.22, 1-aminocyclopropane-1-carboxylate deaminase EC:4.1.99.4.. COG0133 TrpB, Tryptophan synthase beta chain [Amino acid transport and metabolism]. Amino acid transport and metabolism NC_008027 Chromosome PSEEN0039 YP_605850 104779352 Protein 40543 41439 trpI transcriptional regulator TrpI Class 2 ATGGCCCAGGACCTTCCTCCTCTCAACGCCCTGCGGGCCTTCGAGGCAACCGCCCGGCTCAATAGCGTCAGCCAGGCGGCCGAAGCGCTTCATGTTACCCACGGTGCCGTCAGCCGGCAGATCAAGGTGCTCGAGGAGCATCTGGGCGTGGCGCTGTTCGTCAAGGATGGTCGTGGCGTCAAACTCACAGATGCCGGCATGCGCCTACGCGATGTGAGTGCCGAGGCCTTCGACCGGTTGCGAAGTGTCTGCGCCGAGCTTTCCCGCGATGCCGACGAAGCACCCTTCGTGCTCGGCTGCTCCGGCAGCTTGCTGGCCCGCTGGTTCATCCCGCGCCTGGGGCGCTTGAAAGCCGACCTGCCGGAATTGCGCCTGCACTTGTCAGCGGGCGAAGGTGATCTAGATCCTCGCCGCCCGGGGTTGGACGCCCTGCTGGTGTACGCCGAGCCGCCTTGGCCGGCGGACATGCAGGTGCACGTGCTTGCTGAAGAGCGGATCGGCCCGGTGATGAGTCCGCACTTTGAAGGCTTCGATCGGTTGAAGGCCGCGCCAGCCGTGGCTTTGCAACGAGAAGCAGTACTTCACACGACCTCTCGGCCCCAGGCTTGGCCGACCTGGGCACAGCAACATGGCATCGAGCCTGGCGCGCTGAGTTACGGCCAGGCATTCGAGCATCTGTACTACCTGTTGGAGGCTGCGGTGGCTGGGCTTGGCGTGGCCATTGCGCCACAACCGCTGGTTGCGGACGACCTGAAAGCCGGACGGCTGGCCGCACCGTGGGGATTTTCCCCCACCCGTGCGGCGTTGGCCTTGTGGGTACCCCGGCGCGCCGCCGACGGGCGCGCCGAGCAGCTGGCGCAGTGGCTGCGCCGCGAGTTGCAGCAGCAGGCGGGCTAG MAQDLPPLNALRAFEATARLNSVSQAAEALHVTHGAVSRQIKVLEEHLGVALFVKDGRGVKLTDAGMRLRDVSAEAFDRLRSVCAELSRDADEAPFVLGCSGSLLARWFIPRLGRLKADLPELRLHLSAGEGDLDPRRPGLDALLVYAEPPWPADMQVHVLAEERIGPVMSPHFEGFDRLKAAPAVALQREAVLHTTSRPQAWPTWAQQHGIEPGALSYGQAFEHLYYLLEAAVAGLGVAIAPQPLVADDLKAGRLAAPWGFSPTRAALALWVPRRAADGRAEQLAQWLRRELQQQAG inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 3.1.2.2 : Activator ;function prediction: 2.2.2 : Transcription related ;function prediction: 1.5.1.15 : Tryptophan ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ; Cytoplasmic Class 3 TIGR02036 dsdC D-serine deaminase transcriptional activator equivalog 1.3e-11 Regulatory functions DNA interactions PF00126PF03466 HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family..LysR_substrate, LysR substrate binding domain. The structure of this domain is known and is similar to the periplasmic binding proteins.. COG0583 LysR, Transcriptional regulator [Transcription]. Transcription NC_008027 Chromosome PSEEN0040 YP_605851 104779353 Protein 41759 41436 hypothetical protein Class 4 ATGGCCCACAACTCGCTGCGCAACGCCTCGCTGGAAAGCATGGAAGCGGAGATCGAGAGCCTGCTCAAGACGCTGGAGCACCTCAAGCACGATGCCTCGGAAGAGTCCCACAAGACCATGAAGGCGCTGCGCGGCAATGCCGAGAACGCCCTCAAGCACTCGCGCAGCCTGCTCAGCGATGCCTATTCGGAGGTGAAGACCCGCACCCGTCAGACAGGTGTCGCCACCCGCGACTATGCCCAGCAGCACCCCTGGACCACTGCCGGCGTGGCCATCGGCGCCCTGGGCCTGCTGGCCGCCTACCTGATGTGCCGCCGCGACTAG MAHNSLRNASLESMEAEIESLLKTLEHLKHDASEESHKTMKALRGNAENALKHSRSLLSDAYSEVKTRTRQTGVATRDYAQQHPWTTAGVAIGALGLLAAYLMCRRD inference: ab initio prediction:AMIGene:2.0 ;Evidence 4 : Homologs of previously reported genes of unknown function ;inference: non-experimental evidence, no additional details recorded ; Unknown Class 3 PF05957 DUF883, Bacterial protein of unknown function (DUF883). This family consists of several hypothetical bacterial proteins of unknown function.. COG4575 ElaB, Uncharacterized conserved protein [Function unknown]. Function unknown NC_008027 Chromosome PSEEN0041 YP_605852 104779354 Protein 41877 42092 hypothetical protein Class 4 ATGTCCGATCATCACACCTACAAGAAGATCGAGCTGGTCGGGTCCTCGCCCACCAGCATCGAAGAGGCGATCAACAATGCCCTGGCCGAGGCCGGCAAGAGCATCAAGCACCTGGAGTGGTTCGAGGTGGTTGATACTCGCGGGCATATCCGCGACAACAAGGCCGCGCACTTCCAGGTGACGCTTAAGGTTGGGTTCCGCATCGCCAACAGCTGA MSDHHTYKKIELVGSSPTSIEEAINNALAEAGKSIKHLEWFEVVDTRGHIRDNKAAHFQVTLKVGFRIANS inference: non-experimental evidence, no additional details recorded ;inference: ab initio prediction:AMIGene:2.0 ;Evidence 4 : Homologs of previously reported genes of unknown function ; Unknown Class 3 PF07311 DUF1458, Protein of unknown function (DUF1458). This family consists of several hypothetical bacterial proteins as well as one archaeal sequence. Members of this family are typically of around 70 residues in length. The function of this family is unknown.. COG3360 COG3360, Uncharacterized conserved protein [Function unknown]. Function unknown NC_008027 Chromosome PSEEN0042 YP_605853 104779355 Protein 42186 42407 hypothetical protein Class 4 ATGAAGAAGTTGATGCTGGCTGTAGGGCTGATGGTGTTGGCCGGTGGCGCGATGGCGGCGGGCAAGCCGTGCGAGGAGCTCAAGGCGGAGATTGCAGCGAAGCTGGATGCCAAGGGTGTGAAGGGTTACACGCTGGAGATCGTCAAGAAGGGCGACCCGGCGGGCAAGGTGGTGGGGACCTGTGAGGGCGGGGCCAAGGAGATTGTCTACCGGCGTGGTTGA MKKLMLAVGLMVLAGGAMAAGKPCEELKAEIAAKLDAKGVKGYTLEIVKKGDPAGKVVGTCEGGAKEIVYRRG inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 4 : Homologs of previously reported genes of unknown function ; Unknown Class 3 PF06649 DUF1161, Protein of unknown function (DUF1161). This family consists of several short, hypothetical bacterial proteins of unknown function.. NC_008027 Chromosome PSEEN0043 YP_605854 104779356 Protein 43524 42529 luciferase-like monooxygenase Class 3 ATGACGCACCTGCGTGACCTGAAGATTTCCACCCTCGACCTCGTGCCCGTGCGCGCCGACGGCGGCCCGGCGCAGTCGCTGCGCAACTCGCTGGACCTGGCACAGCATGTCGAGCGTTTCGGTTACAACCGTTTCTGGGTGGCCGAACACCACAACATGGATGGCATCGCCAGCTCCGCCACCGCCGTGCTGATGGGCTACCTGGCGGGCGGCACCTCGACGATTCGCATCGGCTCCGGCGGCGTGATGCTGCCCAACCACGCACCGCTGGTGATCGCCGAACAGTTCGGCACCCTGGCCAGCCTGTACCCTGGCCGCATCGACCTGGGCCTGGGCCGTGCCCCCGGCTCCGACCAGATGACCGCCCGCGCCCTGCGCCGCGAGCGTTCTGGCAGTGCCGACGACTTCCCGGACGATGTCGAGGAGCTGTCGCGCTACCTGGGCCCGCGCACCGACGACCAGAAGGTCATCGCCGTGCCCGGCCACGACACCGAAGTGCCGATGTGGCTGCTCGGCTCCAGCCTGTTCAGCGCCCAGCTGGCCGGCATGCGCGGCATGCCCTATGCCTTCGCCTCGCACTTCGCGCCGCGCTACATGCACGAGGCGATCCGCATCTACCGCGACCACTTCAAGCCCTCGACGACGCTGGACAAGCCCTACGTGATGCTGGGCATCCCGATGGTGGTGGCCGAGACCGACGAGAAAGCCGAGTACCTGGCGACCTCGGTGTACCAGCGCATCCTCGCGCTGATCCGTGGCCAGAGCCTGATGCAGCGCCCGCCTGTAGAGAGCATGAATGGCCTGTGGCTGCCCCATGAGCGCGATGCGGTGAGCAGCTTCCTGGGGTTGGCGATGATTGGCAGCCCGCAGAAAGTGCGGGCCAAGGTGGAGGTGCTACTGGAGCAGACCGGTGCGGATGAGCTGATCTTCACCAGCGACCTGTATGAGCATGCCGACCGGATCAGGTCTTACGAGCTGATGGCGCAGGCCCTGTAG MTHLRDLKISTLDLVPVRADGGPAQSLRNSLDLAQHVERFGYNRFWVAEHHNMDGIASSATAVLMGYLAGGTSTIRIGSGGVMLPNHAPLVIAEQFGTLASLYPGRIDLGLGRAPGSDQMTARALRRERSGSADDFPDDVEELSRYLGPRTDDQKVIAVPGHDTEVPMWLLGSSLFSAQLAGMRGMPYAFASHFAPRYMHEAIRIYRDHFKPSTTLDKPYVMLGIPMVVAETDEKAEYLATSVYQRILALIRGQSLMQRPPVESMNGLWLPHERDAVSSFLGLAMIGSPQKVRAKVEVLLEQTGADELIFTSDLYEHADRIRSYELMAQAL inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ; Unknown Class 3 PF00296 Bac_luciferase, Luciferase-like monooxygenase.. COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases [Energy production and conversion]. Energy production and conversion NC_008027 Chromosome PSEEN0044 YP_605855 104779357 Protein 43688 43921 hypothetical protein Class 4 ATGATCCGCGTAGCAATCGCCGTGCTGGCATCCCTGCTGGCCACGGCCGCACTGGCCGCCCCCAAGCCGTGCGAAGAACTGAAGGCCGAGATCGAAGCGAAGATCCAGGCGCGCGGGGTAACCTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAGCGACCCGAACATGGTCGTGGGCAGCTGCGATGGCGGGACGAAGAAGATCATCTACCAGAAGAATGACCGGTAG MIRVAIAVLASLLATAALAAPKPCEELKAEIEAKIQARGVTSYTLEIVPNSEVSDPNMVVGSCDGGTKKIIYQKNDR inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 4 : Homologs of previously reported genes of unknown function ; Unknown Class 3 PF06649 DUF1161, Protein of unknown function (DUF1161). This family consists of several short, hypothetical bacterial proteins of unknown function.. NC_008027 Chromosome PSEEN0045 YP_605856 104779358 Protein 44409 43996 lipoprotein Class 3 ATGCGCCAGCCCATGATGCTGTTCGCCATCAGCGCACTCGGGGCCTGCGCCAGCCCCTTGCCCCCCGTCGACCCGTCCAAGGCCTGGGTCGACCTTTATACCATCACCCCCGGTCGCACCATCATGGCCGACCGCCTGGACGGTAAGCGTCTGGATGATGGCCGCTACTTCCAGTTGACGCCCGGCAAGCATGAACTGGTGGTGCGTTTCGACTTCGAGGTTTATTCCGGCGGTTTCACCACCGACCCCACTGAAAGAACCTGCTACCTCACCGTGCGTTTCAACGACTTCAAGGCTGGCGAACGTTACCGGCTGGAAGCCCGGGCGCCGGTGATGCAGCCGCAGGTGCTGCTGTACGACGCCAGTCGCAAGGTGGTGGTGGATGAACCCAGCGAGGTGTTCTGCATTCCTTGA MRQPMMLFAISALGACASPLPPVDPSKAWVDLYTITPGRTIMADRLDGKRLDDGRYFQLTPGKHELVVRFDFEVYSGGFTTDPTERTCYLTVRFNDFKAGERYRLEARAPVMQPQVLLYDASRKVVVDEPSEVFCIP inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.6.10 : Lipoprotein ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ; Unknown Class 3 NC_008027 Chromosome PSEEN0046 YP_605857 104779359 Protein 44878 44465 lipoprotein Class 3 ATGCGTACTCTGTTTGCCGCCAGCACGCTCGTGCTGCTTTCAGGCTGTTCCACATTGCCAGACCCAGACCCGAAACAGGCCTGGATCGACCTGGCCCCAGGCAACAACGACTCGCTGCACGCGCTGCAAGTGGACGAACGCGACTGGGCCGACACCCGTTATTTCGAAGTGCAGCCCGGCAACCACGAGCTGACCGTGCGCTACCAATTCCCGGTGACGCCCAGCAACATCGGCGCGGTGGACGAACCGCTGTGGCGCGACTGCCAGCTCAACCTGACGTTCAAGGACTTCGCCGCCGGCCAGCGCTATCAGATGCAGGCGGGCAGCATTGGCTTCCGCCCCTGGATCAAGCTCTACGACCAGCAGCAGAAACTGCTCGGCCAAGGTGAGCCGGCAGGTTGCCAACGCAGCTGA MRTLFAASTLVLLSGCSTLPDPDPKQAWIDLAPGNNDSLHALQVDERDWADTRYFEVQPGNHELTVRYQFPVTPSNIGAVDEPLWRDCQLNLTFKDFAAGQRYQMQAGSIGFRPWIKLYDQQQKLLGQGEPAGCQRS inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.6.10 : Lipoprotein ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ; Unknown Class 3 NC_008027 Chromosome PSEEN0047 YP_605858 104779360 Protein 44967 46085 hypothetical protein Class 4 ATGCGCTGCAGCCGTCGGGCTCTCGACCGCGTTTTCATCCGGTTTGTTCCCGTGGCGGTCGCGCTCCTGCTGAACGGTTGCTCCAGCATGGGTTACTACGGGCAGTTGGCCGAGGGCCAATGGCAGTTGTTGCGGGCGCGCCAGCCGGTGGCGCAGGTGATCGCCGACCCTGCCACCCAGCCGGTGTTGCGTCAGCGTCTGCATTTCGCCGAGCAAGCCCGGGTATTTGCCAGCGAGCACCTGAAGCTGCCGGACAACGGCAGCTACCGCGTCTATGCCGACCTGGGGCGGCCTTACGTGGTGTGGAATGTATTCGCCACCCCGGAGCTTTCCTTGCAGCCGGTGACCCATTGCTTCCCCATCGCCGGTTGCGTGGCTTATCGCGGCTATTACCAGCAAGGTGATGCCCGTGGCGCGGCGGCGCTGATGCGCCAGGAAGGGCTGGATGTCTACGTGGGCGGCGTGGAGGCCTACTCGACACTGGGCTGGTTCGATGACCCTATCCTTTCGAGCATGGTGGGTTGGGGGAATGAGCGGCTGGCCACGGTGATCTTCCATGAGCTGGCGCACCAGCGTTTCTATGTGCAGGACGACACCGAGTTCAACGAGTCGTTTGCCTCCTTCGTCGAGCAGGAAGGATCGCGGCAATGGCGCATGGCGCGTGGGCTGGCAGCGGTCGAGGATGGCAGCGTGAAACAGCGCGAGGGGTTCACCCGGCTGATATTGGCCAGCCGTGAGCGGTTGCAGGCGATCTATGCCGGGCCGCTGGACGAGGCGGGCAAGCGGGCGGCCAAGCAGGCGGAGTTTGAACGGTTGCGCAGGGAGTACCGCGAGGTGCGGGACCGGGAGTGGGCTGGGGATCGAAGGTTTGATGCCTGGATCTATGCGCCGATGAACAATGCCAAGTTGCTGCCGTTTGGGCTGTATGACCAGTGGGTGCCTGTGTTTTCGCGGCTGTTCCAGGATGTTGGCGGAGACTGGTCACGGTTCTATGAGCGGGTCGAGGCGTTGGGGCGGCTTTCGATCGAAGAACGCAAGGCGGCGTTGACGCGATTGCAGCAACCTGGGGCCGCGTTGCGGCCCATCGCCGGCAAGCCGGCTCCTACAGGTGCTGACTAG MRCSRRALDRVFIRFVPVAVALLLNGCSSMGYYGQLAEGQWQLLRARQPVAQVIADPATQPVLRQRLHFAEQARVFASEHLKLPDNGSYRVYADLGRPYVVWNVFATPELSLQPVTHCFPIAGCVAYRGYYQQGDARGAAALMRQEGLDVYVGGVEAYSTLGWFDDPILSSMVGWGNERLATVIFHELAHQRFYVQDDTEFNESFASFVEQEGSRQWRMARGLAAVEDGSVKQREGFTRLILASRERLQAIYAGPLDEAGKRAAKQAEFERLRREYREVRDREWAGDRRFDAWIYAPMNNAKLLPFGLYDQWVPVFSRLFQDVGGDWSRFYERVEALGRLSIEERKAALTRLQQPGAALRPIAGKPAPTGAD inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 4 : Homologs of previously reported genes of unknown function ; Cytoplasmic Class 3 PF01433 Peptidase_M1, Peptidase family M1. Members of this family are aminopeptidases. The members differ widely in specificity, hydrolysing acidic, basic or neutral N-terminal residues. This family includes leukotriene-A4 hydrolase, this enzyme also has an aminopeptidase activity.. COG4324 COG4324, Predicted aminopeptidase [General function prediction only]. General function prediction only NC_008027 Chromosome PSEEN0048 YP_605859 104779361 Protein 46742 46092 hydrolase, HAD family Class 3 ATGCATCAGCAGAACATCCTCTTCGACCTCGACGGCACCCTGACCGACCCGCGCTCAGGCATCACCCGTTCGATCCAGTACGCCCTGGCCAAGCTGGGCATCGACGAGCCCGACCTGGCCCGCCTCGAGCACTTCATCGGTCCACCCCTGTTGCAAGCCTTCATGCAGTTCTACGGTTTCGACGAGGCCAAGGCGTGGCAGGCGGTGAACTTCTACCGTGAGCGCTTCAAGGTGACCGGGCTGTACGAAAACCTGGTATTCGACGGTGTGCCTGAGCTGCTGCAAGCCCTCAATGCCCAAGGCCGCACCCTGTACATCGCCACCTCCAAGCCGTGGGAATATGCCCGTGAAATCGCCCGGCACTTCGCCTTCGCCCAGCACTTCAAGGTGATCTACGGCAGCGAACTGGACGGTACCCGCACCAACAAGGTCGAGCTGATTCGCCATCTGCTGGATGAAGAAGGGCTGGACCCGGCGCAGACCCTGATGATCGGTGACCGCAAGCACGACCTGATCGGCGCCCGCAGCAATGGGCTTCAGGCGGTAGCGGTGGGGTACGGGTTCGGCAGTCGGGAGGAGTTGGTGGCCGAGGCGCCAGCGTTCCACTTCGAGACACTGGCCGAGTTGCACCAGGCGTTCATGCACGGTTGA MHQQNILFDLDGTLTDPRSGITRSIQYALAKLGIDEPDLARLEHFIGPPLLQAFMQFYGFDEAKAWQAVNFYRERFKVTGLYENLVFDGVPELLQALNAQGRTLYIATSKPWEYAREIARHFAFAQHFKVIYGSELDGTRTNKVELIRHLLDEEGLDPAQTLMIGDRKHDLIGARSNGLQAVAVGYGFGSREELVAEAPAFHFETLAELHQAFMHG inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ; Cytoplasmic Class 3 TIGR01454 AHBA_synth_RP AHBA synthesis related protein No data 3.2e-13 No data No data PF00702 Hydrolase, haloacid dehalogenase-like hydrolase. This family are structurally different from the alpha/ beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment. The rest of the fold is composed of the core alpha/beta domain.. COG0546 Gph, Predicted phosphatases [General function prediction only]. General function prediction only NC_008027 Chromosome PSEEN0049 YP_605860 104779362 Protein 47347 46799 transferase Class 3 ATGGCCCTCCGGACCTTCCAGCAACACACGCCGAAAGTGGGAGCACGGGCCTTCGTCGACCGTTCGGCGGTGGTCATCGGCGACGTCGAGATCGGCGCGGACAGCTCGATCTGGCCGCTGACCGTAGTACGCGGCGACATGCACCGCATCCGCATCGGCGCGCGCACCAGCGTGCAGGACGGCAGTGTGCTGCACATCACCCACGCCGGGCCGTTCAACCCTGACGGTTTCCCGCTGATCATCGGCGACGAGGTGACCATCGGTCATAAAGTCATGCTGCATGGTTGCACCCTGGGCAACCGCATCCTGGTAGGCATGGGCAGCACGATCATGGACGGCGCCATCGTCGAGGATGAGGTGATCATCGGCGCCGGCAGCCTGGTTCCACCAGGAAAGCGCCTGGTCAGCGGCTACCTGTACATGGGCAGCCCGGTGAAGCAGGTGCGCCTGCTGAGCGAGCAGGAACACGCGTTCTTCCCCTACAGCGCCGGCAACTACGTGAAGCTCAAGGACCAACACCTGGCCGAAGGCTACGACCAACCGGAATGA MALRTFQQHTPKVGARAFVDRSAVVIGDVEIGADSSIWPLTVVRGDMHRIRIGARTSVQDGSVLHITHAGPFNPDGFPLIIGDEVTIGHKVMLHGCTLGNRILVGMGSTIMDGAIVEDEVIIGAGSLVPPGKRLVSGYLYMGSPVKQVRLLSEQEHAFFPYSAGNYVKLKDQHLAEGYDQPE inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ; Unknown Class 3 TIGR02287 PaaY phenylacetic acid degradation protein PaaY No data 1.9e-12 No data No data COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction only]. General function prediction only NC_008027 Chromosome PSEEN0050 YP_605861 104779363 Protein 47450 49501 prlC oligopeptidase A Class 2 GTGAGTGCGAACAACCCGCTGCTGCAGTCCCATGATCTGCCGCCCTTCTCGGCAATCCGCGCCGAGCATGTGCTGCCGGCGATCGAGCAGATCCTCGCCGACAACCGCAAGGCCATCGCCGACCTCCTCGAACAGCAGGGCAAGAACCCGACCTGGGCCGGCCTGGTGCTGGCGATGGACGAGCTCAACGACCGCCTGGGCGCCGCCTGGAGCCCGGTCAGCCACCTCAACGCGGTGTGCAACAGCAAGGAGCTGCGCGAGGCCTACGAGTCGTGCCTGCCGGCCCTGAGCGCCTATTCCACCGAGCTGGGCCAGAACCGCGCCCTGTTCGAAGCGTATGAAGCCCTGGCCGCCAGCCCAGAGGCCGCTGGCTTCGACGTGGCGCAGAAGACCATCATCGACCACGCCCTGCGCGACTTCCGCCTGTCGGGCATCGACCTGCCGGCCGACAAGCAGCAGCGCTACGCCGAAGTGCAGAGCAAGCTCAGCGAGCTGGGCAGCCGCTTCTCCAACCAACTGCTCGACGCCACCCAGGCCTGGACCAAGCACGTCACCGACGAGGCCGCCCTCGCCGGCCTGACCGACTCGGCCAAGGCGCAGATGGCCGCCGCCGCCCAGGCCAAGGGCCTCGACGGCTGGCTGATCACCCTGGAATTCCCCAGCTACTACGCGGTGATGACCTACGCCAGCGACCGCGCCCTGCGCGAAGAGCTGTACGCCGCCTACTGCACCCGCGCCTCCGACCAGGGCCCGAACGCCGGCCAGTTCGACAACGGCCCGGTGATGGAAGAGATCCTCGACCTGCGCCAGGAACTGGCCGGGCTGCTGGGCTACCAGAACTTTGCCGAACTGAGCCTGGCCACCAAGATGGCCGAGTCCAGCGACCAGGTGCTGACGTTCCTGCGTGACCTGGCCAAGCGCAGCAAGCCGTTCGCCGCCCAGGACCTGGAGCAGCTCAAGGCCTATGCCGCCGAGCAGGGTACCCCTGAGCTGGCCAGCTGGGACGCCGGTTACTTCGGCGAGAAGCTGCGCGAGCAGCGCTACAGCGTGTCGCAGGAAGCCCTGCGCGCCTACTTCCCGATCGACAAGGTGCTGACCGGCCTGTTCGCCATCGTCCAGCGCCTGTATGGCATCGAAATCAACGAACTCAAGGGCTTCGACAGCTGGCACCCGGACGTGCGCCTGTTCGAGATCAAGGAGAACGGCCAGCACGTCGGCCGCTTCTTCTTCGACCTCTACGCCCGCGCCAACAAGCGTGGCGGTGCCTGGATGGACGGTGCCCGCGACCATCGCCGTACCGCCGCCGGCGCGCTGCAGAGCCCGGTGGCCAACCTGGTGTGCAACTTCACCCCGGCCACGCCCGGCAAGCCAGCGCTGCTGACCCACGACGAAGTCACCACCCTGTTCCACGAATTTGGCCACGGCCTGCACCATCTGCTGACCCGCATCGAGCATGCCGGTGTATCCGGCATCAACGGTGTGGCCTGGGACGCGGTGGAGCTGCCGAGCCAGTTCATGGAAAACTGGTGCTGGGAGCCGGAAGGCCTGGCGTTGATCTCCGGCCACTACGAAACCGGCGAAGCGCTGCCCCAGGACCTGCTGGACAAGATGCTGGCGGCGAAGAACTTCCAGTCCGGCATGATGATGGTGCGCCAGCTGGAGTTCTCGCTGTTCGACTTCGAGCTGCACGCCACCCATGGCGACGGCCGCGGTGTGCTGCAGGTGCTCGAAGGCGTGCGCGACGAGGTCTCGGTGATGCGTCCGCCGGCCTACAACCGTTTCCCCAACAGTTTCGCCCACATCTTCGCCGGTGGTTACGCGGCGGGTTACTACAGTTACAAGTGGGCCGAAGTGCTGTCGGCCGACGCCTTCTCGCGCTTCGAAGAGGAAGGTGTGCTGAACGCCGAGACGGGCCGCGCCTTCCGCGAAGCCATCCTCGCTCGCGGTGGTTCCCGCGAGCCGATGGTGCTGTTCGTCGACTTCCGTGGCCGTGAACCTTCCATCGATGCATTGCTGCGCCACAGTGGTCTCACCGAGGACGCGGCGGCATGA MSANNPLLQSHDLPPFSAIRAEHVLPAIEQILADNRKAIADLLEQQGKNPTWAGLVLAMDELNDRLGAAWSPVSHLNAVCNSKELREAYESCLPALSAYSTELGQNRALFEAYEALAASPEAAGFDVAQKTIIDHALRDFRLSGIDLPADKQQRYAEVQSKLSELGSRFSNQLLDATQAWTKHVTDEAALAGLTDSAKAQMAAAAQAKGLDGWLITLEFPSYYAVMTYASDRALREELYAAYCTRASDQGPNAGQFDNGPVMEEILDLRQELAGLLGYQNFAELSLATKMAESSDQVLTFLRDLAKRSKPFAAQDLEQLKAYAAEQGTPELASWDAGYFGEKLREQRYSVSQEALRAYFPIDKVLTGLFAIVQRLYGIEINELKGFDSWHPDVRLFEIKENGQHVGRFFFDLYARANKRGGAWMDGARDHRRTAAGALQSPVANLVCNFTPATPGKPALLTHDEVTTLFHEFGHGLHHLLTRIEHAGVSGINGVAWDAVELPSQFMENWCWEPEGLALISGHYETGEALPQDLLDKMLAAKNFQSGMMMVRQLEFSLFDFELHATHGDGRGVLQVLEGVRDEVSVMRPPAYNRFPNSFAHIFAGGYAAGYYSYKWAEVLSADAFSRFEEEGVLNAETGRAFREAILARGGSREPMVLFVDFRGREPSIDALLRHSGLTEDAAA inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.2.3 : Proteins/peptides/glycopeptides ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ; 3.4.24.- ; Cytoplasmic Class 3 PF01432 Peptidase_M3, Peptidase family M3. This is the Thimet oligopeptidase family, large family of mammalian and bacterial oligopeptidases that cleave medium sized peptides. The group also contains mitochondrial intermediate peptidase which is encoded by nuclear DNA but functions within the mitochondria to remove the leader sequence.. COG0339 Dcp, Zn-dependent oligopeptidases [Amino acid transport and metabolism]. Amino acid transport and metabolism NC_008027 Chromosome PSEEN0051 YP_605862 104779364 Protein 49498 49776 hypothetical protein Class 4 ATGAGCGAGGTAGCCGTGAGCAAGAGCAAACGACGCTTCATCGCCGGTGCCGTATGCCCGGCGTGCAGCGAGATGGACAAGCTGATGATGTGGAACGAGGACGGCGTGCCGCACCGCGAGTGCGTGGCCTGCGGGTTCACCGACACCCTGAACGAACAGGGCCTGTCGGTACCCAAGGAGCTGGGCACCCGGGTCAACCACCTGGAACCGAAGGCAGCGCCGGCCAAGGTGCAGACCGTGCAGTTCTTCCCCAATCCGAAGCTGAAGAAGCCAGAGTAA MSEVAVSKSKRRFIAGAVCPACSEMDKLMMWNEDGVPHRECVACGFTDTLNEQGLSVPKELGTRVNHLEPKAAPAKVQTVQFFPNPKLKKPE inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 4 : Homologs of previously reported genes of unknown function ; Cytoplasmic Class 3 TIGR02443 TIGR02443 conserved hypothetical protein No data 1.9e-31 No data No data COG3529 COG3529, Predicted nucleic-acid-binding protein containing a Zn-ribbon domain [General function prediction only]. General function prediction only NC_008027 Chromosome PSEEN0052 YP_605863 104779365 Protein 49978 51033 hypothetical protein Class 4 ATGACCCCTGCCCCCCTCCGTGGTCGCGGCACCGCCGCCAACCCCCACAACCGCTTCGCTCCAAGCCGCTCGGTGGCCGAGGACGACGGCTGGCACCAGGAAGTCCCGCCCACCCAAGGCACCGAAGTGCGGATCGAGACGGCCAAGACCATCATCGCCCGCAACACTTCCCCCGACCTGCCCTTCGACCGTTCCATCAACCCCTATCGCGGCTGTGAGCACGGCTGCATTTACTGTTACGCCCGCCCCAGCCACGCCTACTGGGACCTCTCCCCCGGCCTGGACTTCGAAACCAAGCTGATCGCCAAGACCAACGCCGCCGAAGTGCTCGAGCAGCAACTGAGCAAACCCGGCTACGTCTGTGCGCCGATCAACCTCGGCTCCAACACCGATCCCTACCAGCCCATCGAGCGCGAGCAGCAACTCACCCGGCGCTTGCTCGAAGTGCTGCTGCGCTACCGCCATCCGGTCACCATCGTCACCAAAGGCTCGCTGATACTGCGCGACCTCGACCTGATCAGCGAACTGGCCAGCCAGCGCCTGGCGCGGGTGATGATCAGCCTCACTACCCTCGACGACGAACTCAAGCGCACGCTGGAGCCGCGGGCGGCGGCGCCCAAGGCGCGACTTCGCGCGATCCGGGTATTGCGCGAGGCGGGAGTGCCAGTGGGCGTGCTGTGCTCGCCGATGATTCCGATGATCAACGACAGCGAACTGGAGCGCTTGCTGGAAGCGGCGAAGGAGGCCGGCGCGCAGAGCGCGGCGTACATGATGCTGCGCCTGCCGCTGGAAGTGGCGCCGTTGTTCGAGCAGTGGCTGCAGGATCACTACCCACAGCGCGCCGCTCATGTGTTGAGCCTGATCCGCCAGAGCCGTGGTGGTGAGCTGTATGACAGCCGGTTCGGTGCGCGGATGCGCGGTGAAGGGGTGTTCGCCGAATTGCTGGCGCAGCGCTTTCGCAAGGCGGCCAGACGGTTGGGGTTTGAAGGGCGGGAAGACTTGGCGCTGGACTGCACGGCCTTTTGTCCGCCGGGCTCGCAGATGGCGTTGTTCTGA MTPAPLRGRGTAANPHNRFAPSRSVAEDDGWHQEVPPTQGTEVRIETAKTIIARNTSPDLPFDRSINPYRGCEHGCIYCYARPSHAYWDLSPGLDFETKLIAKTNAAEVLEQQLSKPGYVCAPINLGSNTDPYQPIEREQQLTRRLLEVLLRYRHPVTIVTKGSLILRDLDLISELASQRLARVMISLTTLDDELKRTLEPRAAAPKARLRAIRVLREAGVPVGVLCSPMIPMINDSELERLLEAAKEAGAQSAAYMMLRLPLEVAPLFEQWLQDHYPQRAAHVLSLIRQSRGGELYDSRFGARMRGEGVFAELLAQRFRKAARRLGFEGREDLALDCTAFCPPGSQMALF inference: non-experimental evidence, no additional details recorded ;inference: ab initio prediction:AMIGene:2.0 ;Evidence 4 : Homologs of previously reported genes of unknown function ; Cytoplasmic Class 3 PF04055 Radical_SAM, Radical SAM superfamily.. COG1533 SplB, DNA repair photolyase [DNA replication, recombination, and repair]. DNA replication, recombination, and repair NC_008027 Chromosome PSEEN0053 YP_605864 104779366 Protein 51422 52141 cynT-2 carbonic anhydrase Class 2 ATGCCCATCAAGGACCCATCCAAGGTTGTCCCGGCCGCACCCGCCGAAAGCGCCGATGCCGCCCTGAAGCATATCGTCGACGGCTTCCTGCGGTTCCACACCGAAGTCTTCCCCGAGCAGCAGGAGCTGTTCAAGAAGCTGGCCACCGCGCAAAAGCCGCGGGCCATGTTCATCACCTGCGCCGACTCGCGCATCGTCCCCGAGCTGATCACCCAGAGCTCGCCGGGCGACCTGTTCGTCACCCGTAACGTCGGTAACGTCGTGCCGCCGTATGGCCAGATGAACGGCGGTGTTTCCAGCGCCATCGAATACGCGGTGCTGGCGCTGGGCGTGCACCACATCATCGTCTGCGGCCACTCCGACTGCGGCGCGATGCGCGCGGTGCTCAACCCGCACTCGCTGGACAAGATGCCGACCGTTTCCGCCTGGCTGCGCCATGCCGAAGTGGCACGCACCGTGATCGAGGACAACTGCTCCTGCGGCAGCGAGCACGAAAGCATGCAGTTGCTGACCAAAGAGAACGTCATCGCCCAGCTGCACCACCTGCGCACCCACCCGTCGGTCGCCTCGCGCCTGGCAGCCGGCCAACTGCACATCCATGGCTGGATCTACGACATCGAAACCAGCCAGATCGAAGCCTACAATGCCGCCAGTGATCGCTTCCTGCCACTGACCGCAGGCGAGCCGATCCCCTCCGCTACTCCGAGAGGCCGCTACTAA MPIKDPSKVVPAAPAESADAALKHIVDGFLRFHTEVFPEQQELFKKLATAQKPRAMFITCADSRIVPELITQSSPGDLFVTRNVGNVVPPYGQMNGGVSSAIEYAVLALGVHHIIVCGHSDCGAMRAVLNPHSLDKMPTVSAWLRHAEVARTVIEDNCSCGSEHESMQLLTKENVIAQLHHLRTHPSVASRLAAGQLHIHGWIYDIETSQIEAYNAASDRFLPLTAGEPIPSATPRGRY inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 5.6.2 : Detoxification (xenobiotic metabolism) ;function prediction: 1.7.24 : Cyanate catabolism ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ; 4.2.1.1 ; Unknown Class 3 PF00484 Pro_CA, Carbonic anhydrase.. COG0288 CynT, Carbonic anhydrase [Inorganic ion transport and metabolism]. Inorganic ion transport and metabolism NC_008027 Chromosome PSEEN0054 YP_605865 104779367 Protein 52331 53866 sulfate transporter Class 3 ATGGTGAACAAGACACAGATCAAAGCGGCAGTGCCGCGTGAGTTGCTGGCCTCGGTGGTGGTGTTCCTGGTGGCCCTGCCGTTGTGCATGGGCATTGCCATCGCCTCCGGCATGCCCCCGGCCAAAGGCCTGATCACCGGCATCATCGGCGGAATCGTGGTGGGCTTCCTGGCGGGCTCGCCGCTGCAGGTGAGCGGCCCGGCGGCGGGCCTGGCGGTGCTGGTGTTCGAGCTGGTGCGCCAGCATGGCATGGCGATGCTCGGGCCGATCCTGTTGCTGGCGGGGTTGCTGCAACTGCTGGCCGGACGCTTGCGCTTGGGGTGCTGGTTCCGGGTAACGGCGCCAGCGGTGGTGTACGGCATGCTCGCCGGCATCGGTGTGCTGATCGTGCTGTCCCAGGTGCACGTGATGTTCGACACGGCGCCGCAGCCGTCGGGTGTGGATAACCTGCTGGGCTTCCCGGCGACGCTGGCTTCGGCCCTGCCGCTGGAGCGCGCGGGCAATGGCTGGCAGGCCGGCGCATTGGGCCTGGGCACCATTGCCATCATGTGGGGCTGGGAGCGCTTTCGCCCGCAACGTTTGCGCTTCATCCCTGGTGCGCTGCTCGGGGTCGCAGCGATGACCGCCGTCAGCCTGTGGCTGGCGCTGCCGGTCAATCGCGTGCAGGTACCAGCCGACCTGTCCGAAGCCATCGACTGGCTACGCCCGGACGATCTGCTCAAGCTGGCCGACCCCACGCTGCTGGTGGCAGCTTTCGCCCTCGCATTCATCGCCAGCGCCGAGACCTTGCTGTCCGCAGCCGCGGTGGACCGCATGCACAGCGGCCAGCGTTCGGACTTCGACCGTGAACTGTCGGCGCAGGGCATCGGCAACATGCTCTGCGGTGTGCTCGGCGCGCTGCCTATGACCGGGGTGATCGTGCGCAGCTCGGCCAACGTGCAGGCCGGCGCGCAGACCCGGGCTTCGGCGATCTTGCATGGTGTGTGGTTGCTGGCCTTCGTGGTCGTGTTGAGCAGCGTGCTGCAGCAGATCCCGGTGGCGAGCCTGGCGGGCGTGCTGGTGTACACCGGCGTGAAGCTGGTGGACTTCAAGGCATTCCGCGGCCTGGGCCGTTATGGGCGGATGCCGATGTTCACCTATGCCGCCACGGCACTGGCGATTGTCTTCACCGATTTGCTGACCGGGGTGCTGCTGGGCTTTGCCCTCACCCTGCTGAAGTTGGCGTTCAAGGCGGCGCGATTGAAGATCAACCTGGTGGCGCTGGATGCGCCGGGGCACATGGAGCTGCGCCTGAGCGGGGCGGCGACGTTCCTCAAGGTGCCGGCGCTGACCCAGGTGCTGGAGACCGTGCCGGAAGGGACGACGCTACATGTACCCTTAGGCAACCTGAGCTATATCGACCATTCCTGCCTGGAGTTGCTGGAGGACTGGGGGCGCAGTGGCGCGGTCAAGGGGGCGCGGTTGGTGCTGGAAGAGCGGCGGCTGAAGCGGCGGGTCGAGGGGCGGCTGCGGACTACGGCAGGGCTTGGGGCTTGA MVNKTQIKAAVPRELLASVVVFLVALPLCMGIAIASGMPPAKGLITGIIGGIVVGFLAGSPLQVSGPAAGLAVLVFELVRQHGMAMLGPILLLAGLLQLLAGRLRLGCWFRVTAPAVVYGMLAGIGVLIVLSQVHVMFDTAPQPSGVDNLLGFPATLASALPLERAGNGWQAGALGLGTIAIMWGWERFRPQRLRFIPGALLGVAAMTAVSLWLALPVNRVQVPADLSEAIDWLRPDDLLKLADPTLLVAAFALAFIASAETLLSAAAVDRMHSGQRSDFDRELSAQGIGNMLCGVLGALPMTGVIVRSSANVQAGAQTRASAILHGVWLLAFVVVLSSVLQQIPVASLAGVLVYTGVKLVDFKAFRGLGRYGRMPMFTYAATALAIVFTDLLTGVLLGFALTLLKLAFKAARLKINLVALDAPGHMELRLSGAATFLKVPALTQVLETVPEGTTLHVPLGNLSYIDHSCLELLEDWGRSGAVKGARLVLEERRLKRRVEGRLRTTAGLGA inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 4.2.A.53 : The Sulfate Permease (SulP) Family ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ; Cytoplasmic Membrane Class 3 GO:0016020 ; TIGR00815 sulP sulfate permease subfamily 4.9e-26 Transport and binding proteins Anions PF00916PF00860 Sulfate_transp, Sulfate transporter family. Mutations in human diastrophic dysplasia protein lead to several diseases..Xan_ur_permease, Permease family. This family includes permeases for diverse substrates such as xanthine, uracil and vitamin C. However many members of this family are functionally uncharacterised and may transport other substrates. Members of this family have ten predicted transmembrane helices.. COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]. Inorganic ion transport and metabolism NC_008027 Chromosome PSEEN0055 YP_605866 104779368 Protein 54583 53942 hypothetical protein Class 4 ATGAACATCGCTGCTGTACGCGAGCAGATCGAAACCGCCCATCAACATGAGAGCCGCACAGGCCAACTGAAAGCCCGCCTCGAACTGCAATTGCCGCACCTGCATCCATCGATTCAACTACCCCAGCAGGATGCCCAGGGTACCTTGGCGCGCTTCGTCGGCGCCTACATCAACGAGGTTCCGGAACTGCTCGAGGCCGCGCACAACGTGGCACTCGAAGCCGGTATCGAGTCGCAGATCAAACCGGTGCTGAAGATCGCCGAAGCCTACTTCCTGCAGCCGCCCAGCGTGATGGCCGGGCATGTCGGTCTCGACTGCCTGCTGGACGAGGCCTACCTGGCGCACCGCCTGGTCGAGGAGGTCAACGACCTGTACATCCGCCACTTCCAGCAGCCGCTGATTCCGGTGGATACCACGGTGGCCAACCTGATCGCCCACCAGTTGATCGGCGAGACTTTTGCCAACCAGCTGGACGAGGTGGTGCACCATTCGGTGGATGAAATGCTCGATGACGAAAGCTTCGCCGCTGAATCTGTGGAGGCTTATCGCGACAAGCTGTCGAGCCCGGAAACCGGCGCGGCGTGGAAACGCTGGCCGTGCCTGTCGCGCCAACTTGGGGTCGAGCTGGGCCAATCGGCTTGA MNIAAVREQIETAHQHESRTGQLKARLELQLPHLHPSIQLPQQDAQGTLARFVGAYINEVPELLEAAHNVALEAGIESQIKPVLKIAEAYFLQPPSVMAGHVGLDCLLDEAYLAHRLVEEVNDLYIRHFQQPLIPVDTTVANLIAHQLIGETFANQLDEVVHHSVDEMLDDESFAAESVEAYRDKLSSPETGAAWKRWPCLSRQLGVELGQSA inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 4 : Homologs of previously reported genes of unknown function ; Cytoplasmic Class 3 NC_008027 Chromosome PSEEN0056 YP_605867 104779369 Protein 54963 56090 coxB cytochrome c oxidase, subunit II Class 3 ATGATGCGACATCCACATGTCTGGATGGGCCTGTTGCTGTGGTCAATGTTTGGTCAGGCACAGGCGGCATGGACCGTGAACATGGCTCCCGGGGCGACGGACGTCTCCCACGCCGTGTTCGACCTGCACATGACCATCTTCTGGATCTGCGTGATCATCGGCATCGTGGTGTTCGGCGCGATGTTCTGGTCGATGGTCATCCATCGCCGCTCCACTGGCCAGCAGCCCGCGCATTTTCACGAGCACACCTGGGTTGAGATTCTCTGGACCGTCGTCCCCTTCCTGATCCTCGTGGCCATGGCCATCCCGGCCACCAAGACCCTGATCGAAATCTACGACGCCAGTGAGTCGGACATCGACATCCAGGTCACCGGCTACCAGTGGAAGTGGCACTACAAGTACCTGGGCCAGGACGTGGAGTTCTTCAGCAACCTGGCCACCCCCGCCGACCAGATCCACAACAAGGCGCCCAAGGACGAGCACTACCTGCTCGAAGTCGACCAGCCGCTGGTGCTGCCGGTGGGGGCCAAGGTGCGCTTCCTGGTCACCGCCGCCGATGTCATCCATTCCTGGTGGGTACCTGCCTTCGCGGTCAAGCGCGACGCCATCCCCGGCTTCGTCAACGAGGCTTGGACCCGCATCGAGAAACCCGGCATCTACCGTGGCCAGTGCACCGAGCTGTGCGGCAAGGACCACGGTTTCATGCCGGTGGTGGTGGAGGTGAAGTCCAAGGCTGACTACGAGACCTGGCTGGGCGAGCGCAAGGCCGAGGCGGCCAAGCTCAAGGAGCTGACCAGCAAGGACTGGACCCTGCAGGAGCTGGTCGAACGCGGCGACAAGGTCTACCACACCACTTGCGTGGCCTGTCACCAGGCCGAAGGCCAGGGCCTGCCGCCGATGTTCCCGGCGCTCAAGGGTTCGAAGATCGCCACCGGGCCGAAGGAAGGCCACCTGAGCATTGTCTTTCACGGTAAGCCCGGCACGGCCATGGCCGCATTCGGCAAGCAACTCTCGGAAGTCGACATCGCCGCCGTGGTCACCTACGAGCGCAACGCCTGGGGCAACAACAAGGGCGACATGGTCACGCCGAAGGACGTGCTGGCGCTCAAGCAGGCGGAAAGCAAATGA MMRHPHVWMGLLLWSMFGQAQAAWTVNMAPGATDVSHAVFDLHMTIFWICVIIGIVVFGAMFWSMVIHRRSTGQQPAHFHEHTWVEILWTVVPFLILVAMAIPATKTLIEIYDASESDIDIQVTGYQWKWHYKYLGQDVEFFSNLATPADQIHNKAPKDEHYLLEVDQPLVLPVGAKVRFLVTAADVIHSWWVPAFAVKRDAIPGFVNEAWTRIEKPGIYRGQCTELCGKDHGFMPVVVEVKSKADYETWLGERKAEAAKLKELTSKDWTLQELVERGDKVYHTTCVACHQAEGQGLPPMFPALKGSKIATGPKEGHLSIVFHGKPGTAMAAFGKQLSEVDIAAVVTYERNAWGNNKGDMVTPKDVLALKQAESK inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.4.2 : Electron acceptor ;Evidence 2b : Function of strongly homologous gene ; 1.9.3.1 ; Cytoplasmic Membrane Class 3 GO:0016682 ; TIGR01432 QOXA quinol oxidase AA3, subunit II No data 2.7e-08 No data No data PF00116PF02790PF00034 COX2, Cytochrome C oxidase subunit II, periplasmic domain..COX2_TM, Cytochrome C oxidase subunit II, transmembrane domain. The N-terminal domain of cytochrome C oxidase contains two transmembrane alpha-helices..Cytochrom_C, Cytochrome c. The Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included.. COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion]. Energy production and conversion NC_008027 Chromosome PSEEN0057 YP_605868 104779370 Protein 56122 57711 coxA cytochrome c oxidase, subunit I Class 2 ATGAGTGCAGTGATCGACGACCACGCCCACGGTCATGAACACGCCCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCACAAGGACATCGGCACGATGTACCTGTGGTTCGCCTTCACCATGTTCCTGCTCGGCGGCTCGTTCGCCATGGTGATCCGCGCCGAGCTGTTCCAGCCCGGGCTGCAGATCGTCGAGCCGGCGTTCTTCAACCAGATGACCACCATGCACGGGCTGATCATGGTGTTCGGCGCGGTGATGCCGGCGTTCGTCGGGCTGGCCAACTGGATGATCCCGCTGATGATCGGCGCCCCGGACATGGCCCTGCCGCGAATGAACAACTTCAGCTTCTGGCTGCTGCCGGCGGCGTTCCTGCTGCTGGTCTCGACCCTGTTCAGCCCTGGCGGCGGGCCCAACTTCGGCTGGACCTTCTACGCGCCGCTGTCGACCACCTACGCCCCGGCCAGCGTCACCTTCTTCATCTTTGCCATCCACCTGATGGGCATCAGCTCGATCATGGGCGCGATCAACGTGATCGCCACCATCCTCAACCTGCGCGCCCCGGGCATGACCCTGATGAAGATGCCGCTGTTCGTCTGGACCTGGCTGATCACCGCGTTCCTGCTGATCGCGGTGATGCCGGTGCTGGCCGGCGTGGTGACCATGATGCTGATGGACATCCACTTCGGCACCAGCTTCTTCAGTGCCGCCGGTGGTGGTGACCCGGTGCTGTTCCAGCATGTGTTCTGGTTCTTCGGCCACCCCGAGGTGTACATCATGATCCTGCCCGCCTTCGGCGCGGTCAGCTCGATCATCCCGGCGTTCTCGCGCAAGCCGCTGTTCGGCTACACCTCGATGGTCTACGCCACCGGCGCGATCGCCTTCCTGTCGTTCATCGTCTGGGCCCACCACATGTTCGTGGTCGGTATCCCGGTGGTGGGCGAGCTGTTCTTCATGTACGCCACCATGCTGATCGCCGTGCCCACCGGGGTGAAGGTGTTCAACTGGGTCAGCACCATGTGGGAGGGCTCGCTGACCTTCGAGACGCCGATGCTGTTCGCCATCGCCTTCGTCATCCTGTTCACCATCGGTGGCTTCTCCGGGTTGATGCTGGCCATCGCCCCGGCGGACTTCCAGTACCACGACACTTACTTCGTGGTCGCCCACTTCCACTACGTGCTGGTGCCCGGGGCGATCTTCGGTATCTTCGCCTCGGCCTACTACTGGCTGCCGAAATGGACCGGGCACATGTATGACGAAACCCTCGGCAAGCTGCACTTCTGGTTGTCGTTCATCGGCATGAACATGGCCTTCTTCCCCATGCACTTCGTCGGTCTGGCCGGCATGCCACGGCGGATCCCCGACTACAACCTGCAATTTGCCGACTTCAACATGGTCTCGTCGATCGGCGCCTTCATGTTCGGTGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCCGCGGCGGTGCGCCGGCAGCGGCCAAGCCCTGGGACGGTGCCGAGGGGCTGGAGTGGTCGATTCCGTCGCCGGCGCCTTATCACACCTTCCAGACCCCTCCGGAAGTGAAGTAG MSAVIDDHAHGHEHAHGPAKGLMRWVLTTNHKDIGTMYLWFAFTMFLLGGSFAMVIRAELFQPGLQIVEPAFFNQMTTMHGLIMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPAAFLLLVSTLFSPGGGPNFGWTFYAPLSTTYAPASVTFFIFAIHLMGISSIMGAINVIATILNLRAPGMTLMKMPLFVWTWLITAFLLIAVMPVLAGVVTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGHPEVYIMILPAFGAVSSIIPAFSRKPLFGYTSMVYATGAIAFLSFIVWAHHMFVVGIPVVGELFFMYATMLIAVPTGVKVFNWVSTMWEGSLTFETPMLFAIAFVILFTIGGFSGLMLAIAPADFQYHDTYFVVAHFHYVLVPGAIFGIFASAYYWLPKWTGHMYDETLGKLHFWLSFIGMNMAFFPMHFVGLAGMPRRIPDYNLQFADFNMVSSIGAFMFGATQIFFLFIVIKCIRGGAPAAAKPWDGAEGLEWSIPSPAPYHTFQTPPEVK inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.4.2 : Electron acceptor ;Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism ; 1.9.3.1 ; Cytoplasmic Membrane Class 3 PF00115 COX1, Cytochrome C and Quinol oxidase polypeptide I.. COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 [Energy production and conversion]. Energy production and conversion NC_008027 Chromosome PSEEN0058 YP_605869 104779371 Protein 57722 58279 cytochrome c oxidase assembly protein Class 3 ATGGACGGCCTGTCGCTCAAACGCCTGGTCACCCGCCTGCTGATGCTGACCGTGGTGATGTTCGCCTTCGGCTTTGCCCTGGTGCCGATCTACGACGTGATGTGCAAGGCCTTTGGCATCAACGGCAAGACCGGTGGGCAGTACGAGGGCAGCCAGGTGAGTGACCCGTCGCGCTCGGTGCGGGTGCAGTTCATGTCGACCAACGCCGGTGACATGAGCTGGGAGTTCCACTCCACCGCCGACCAGCTCGAGGTCAACCCGGGGGCGGTGAACCAGATGATCTTCATCGCCCGCAACCCGACCGACAAACCCATGAGCGCCCAGGCCATCCCCAGCATCACCCCGGCCGAGGCCGCGGCGTATTTCCACAAGACCGAGTGCTTCTGTTTCACCCAGCAGGTGCTGCAGCCGGGCGAGCGCATCGAGATGCCGGTGCGTTTCATCGTCGACCGCGACCTGCCGGAGGCGGTGAAGCACCTGACCCTGGCCTACACCCTGTTCGACATCACCGCTCGCCACCCCCCGGTCGCCCATGTCGCGACCGAGGCCGCCCGTTGA MDGLSLKRLVTRLLMLTVVMFAFGFALVPIYDVMCKAFGINGKTGGQYEGSQVSDPSRSVRVQFMSTNAGDMSWEFHSTADQLEVNPGAVNQMIFIARNPTDKPMSAQAIPSITPAEAAAYFHKTECFCFTQQVLQPGERIEMPVRFIVDRDLPEAVKHLTLAYTLFDITARHPPVAHVATEAAR inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.6.15.1 : Cytochromes ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ; Unknown Class 3 PF04442 CtaG_Cox11, Cytochrome c oxidase assembly protein CtaG / Cox11. Cytochrome c oxidase assembly protein is essential for the assembly of functional cytochrome oxidase protein. In eukaryotes it is an integral protein of the mitochondrial inner membrane. Cox11 is essential for the insertion of Cu(I) ions to form the CuB site. This is essential for the stability of other structures in subunit I, for example haems a and a3, and the magnesium/manganese centre. Cox11 is probably only required in sub-stoichiometric amounts relative to the structural units. The C terminal region of the protein is known to form a dimer. Each monomer coordinates one Cu(I) ion via three conserved cysteine residues (111, 208 and 210) in Saccharomyces cerevisiae. Met 224 is also thought to play a role in copper transfer or stabilising the copper site.. COG3175 COX11, Cytochrome oxidase assembly factor [Posttranslational modification, protein turnover, chaperones]. Posttranslational modification, protein turnover, chaperones NC_008027 Chromosome PSEEN0059 YP_605870 104779372 Protein 58296 59183 cytochrome c oxidase, subunit III Class 3 ATGGCAAGCCACGAGCATTACTACGTCCCGGCGCAGAGCAAGTGGCCGATCATCGCCACGATCGGCATGTTCATTACCGTGTTCGGCCTGGGGACCTGGTTCAACGACCTCAAGGCCGGGCACCCGGAATCCCACGGGCCGCTGATCTTCTTCGTCGGCGGGCTGTTCCTGGCGTACATGTTGTTCGGCTGGTTCGGCGCGGTGGTCAAGGAGAGCCATGCGGGGCTGTACAGCTCGCAGATGGACCGCTCGTTCCGCTGGGGCATGAGCTGGTTCATCTTTTCCGAGGTGATGTTCTTCCTGGCGTTCTTCGGGGCGCTGTTCTATGTGCGGGTGCTGGCAGGGCCATGGCTGGGGGGCGAGGGGCACAAGGGCGTGGCGCACATGCTCTGGCCTAACTTCGAGTTTGTCTGGCCACTGCTGCACACGCCTGACCCGAAACTGTTCCCGCCGCCCAAGGAGGTGATCGATCCGTGGCACCTGCCGCTGATCAACACCATCCTGCTGGTGAGTTCCAGCGTGACCGTGACCATCGCCCACCACGCCTTGCGCAAGGGGCATCGCGGCCCGCTGAAACTGTGGCTGGGGCTGACGATTCTGCTGGGGCTGTCGTTCCTGGCGTTGCAGGCCTACGAGTACCACGAGGCCTACACCAAGCTGGGGCTGACGCTGGGGTCTGGGGTCTATGGCGCGACGTTCTTCATGCTCACGGGCTTCCACGGCGCGCATGTGACGTTGGGCACGATAATCCTGTTCGTGATGTTCTGCCGGGTGCTGCGGGGGCACTTCAACCCGGAGAAGCACTTCGGGTTCGAGGCGGCGAGTTGGTACTGGCACTTCGTCGATGTGGTGTGGGTGGGGTTGTTCATCTTTGTTTATGTGCTGTAG MASHEHYYVPAQSKWPIIATIGMFITVFGLGTWFNDLKAGHPESHGPLIFFVGGLFLAYMLFGWFGAVVKESHAGLYSSQMDRSFRWGMSWFIFSEVMFFLAFFGALFYVRVLAGPWLGGEGHKGVAHMLWPNFEFVWPLLHTPDPKLFPPPKEVIDPWHLPLINTILLVSSSVTVTIAHHALRKGHRGPLKLWLGLTILLGLSFLALQAYEYHEAYTKLGLTLGSGVYGATFFMLTGFHGAHVTLGTIILFVMFCRVLRGHFNPEKHFGFEAASWYWHFVDVVWVGLFIFVYVL inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.4.2 : Electron acceptor ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ; 1.9.3.1 ; Cytoplasmic Membrane Class 3 PF00510 COX3, Cytochrome c oxidase subunit III.. COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 [Energy production and conversion]. Energy production and conversion NC_008027 Chromosome PSEEN0060 YP_605871 104779373 Protein 59484 59281 hypothetical protein Class 4 ATGCTCAAGGCCGCGATAGTCCTGATGCTGCTGGCCACGGTCGCCAGCCTGTTCAGTGGCCTGGTATTCCTGGTCAAGGACGACGACCATTCGACCCGCCTGCTCAAGGCCCTGACCGTGCGTGTCACCCTGGCAGCCCTGACCATCGGGCTGGTCGCCTGGGGCTTCATCAGCGGCCAACTGGTGTCGCACGCCCCCTTCTAA MLKAAIVLMLLATVASLFSGLVFLVKDDDHSTRLLKALTVRVTLAALTIGLVAWGFISGQLVSHAPF inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 4 : Homologs of previously reported genes of unknown function ; Unknown Class 3 NC_008027 Chromosome PSEEN0061 YP_605872 104779374 Protein 59547 60290 hypothetical protein Class 4 ATGAGGCCGTTCCGTCCGGGCTGGATCCCGACCCTGGTGGTGCTCGCGCTGCTGCCGGGGCTGATCGCGCTTGGCTGCTGGCAACTGCGCCGCGCCGACGAAAAGCGCGCCCTGCTCGATACCTACACCGAACGCCAGATCGAGGCGCCGGTGGCTGCCGCGCAGCTACGCCAGTTGCCGGATCCTGCCTTCTACCCGGTGCACCTCTACGGCAGTTTCGACGCCGAGCACAGCCTGCTGCTGGATAACCAGATGCGCGATGGCAAACCCGGCGTCGAGCTGTTGCAGCCGTTCCACGACCAGGCCAGCGGGCAGTGGCTGCTGGTCAATCGCGGCTGGCTGCCCTGGCCGGATCGCCGTGTGCCGGTGCGCTTCGACACCCCCGATCAGCCGCTGGCGCTGGAAGCCTTGGTGTATGTCGCGCCCGGCAAGACGTTCCAGCTCCACCCCGACTCGACCGAAGGCCGCTGGCCGCATCTGCTCACCGCCATCGACCCGACTGCGCTGTGGCAACAACTGGGACGGGAAGGTTTCGCCCATGAACTGCGCCTGCAACCGGGCCCAGCTAGTTATCGGCTGGACTGGCCGGTAGTCGCCATGGGCCCCGAGAAGCACCTGGGCTACGCCGTGCAGTGGTTCGCCCTGGCCACGGCATTGCTGCTGCTCTACCTCTATTTCGGCTGGCATCACAACGACAAGGAGAACCGCCATGGCCGCCGCCACGAGTCCATTGCACGCACCTGA MRPFRPGWIPTLVVLALLPGLIALGCWQLRRADEKRALLDTYTERQIEAPVAAAQLRQLPDPAFYPVHLYGSFDAEHSLLLDNQMRDGKPGVELLQPFHDQASGQWLLVNRGWLPWPDRRVPVRFDTPDQPLALEALVYVAPGKTFQLHPDSTEGRWPHLLTAIDPTALWQQLGREGFAHELRLQPGPASYRLDWPVVAMGPEKHLGYAVQWFALATALLLLYLYFGWHHNDKENRHGRRHESIART inference: non-experimental evidence, no additional details recorded ;inference: ab initio prediction:AMIGene:2.0 ;Evidence 4 : Homologs of previously reported genes of unknown function ; Unknown Class 3 COG3346 COG3346, Uncharacterized conserved protein [Function unknown]. Function unknown NC_008027 Chromosome PSEEN0062 YP_605873 104779375 Protein 60256 60834 hypothetical protein Class 4 ATGGCCGCCGCCACGAGTCCATTGCACGCACCTGAAGGCCGCAAGGCCCGCGGGCGCCTGCAGTTGCTGCTGATCCTGTTCGTCGTGCTCGGGCCGATGATCCTCGCCACCAGCATGTACAAGCTGCAGTTCTGGGTACCGGACGGGCGCAGCTACCACGGCGTGATGATCGGCAACGGCCTGGGCCGCGCCGATATCGGCATCGACGCCCAGGACGAGCGCTGGCAACTGCTGGTCAGTGCCCCCGAGGCCTGCGCCGAAGACTGCCGGCAGTTGGTGTACCTGGCCCGGCAGATCCAGGTTGGCCTGGGGCGCGACGCCAGCCGCGCCAGCCATGCCCTGGCCTCGGCCCGGCCGTTGGAGGGCGATTACCAAGGCGTGCTCGACCGCGAGTACCCGCAGCTGCAGCGCTATCCGCTGGACGCCGAGCGTTACCGGCAAAAGGTGAGTGAACCGGGGCCGCAACTGTGGATCGTCGACCCCCACGGCAACCTGGTGCTGCGCTACGACGCCAAGGTCAACGGCAAGCAAGTGCTGGACGATCTGCGCCACCTGCTCAAGCTGTCCAACATCGGCTAG MAAATSPLHAPEGRKARGRLQLLLILFVVLGPMILATSMYKLQFWVPDGRSYHGVMIGNGLGRADIGIDAQDERWQLLVSAPEACAEDCRQLVYLARQIQVGLGRDASRASHALASARPLEGDYQGVLDREYPQLQRYPLDAERYRQKVSEPGPQLWIVDPHGNLVLRYDAKVNGKQVLDDLRHLLKLSNIG inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;Evidence 4 : Homologs of previously reported genes of unknown function ; Unknown Class 3 NC_008027 Chromosome PSEEN0063 YP_605874 104779376 Protein 60844 61917 cytochrome oxidase assembly protein Class 3 ATGGCCAGACCCGGATTCCGCCTCGCTGTGTTCGCCACCCTGTTGGCGTTGCTGGTCGTGCTGCTCGGTGCCTATACCCGCCTGACCCACGCTGGCCTCGGCTGCCCGGACTGGCCGGGCTGCTACGGCTTCATCAGCGTGCCCAAGACCGATGCGCAGCTGGCCCATGCCGAGCTGCACTTCCCCGAGCACCCGGTCGAGGAAGCCAAGGGTTGGGCGGAGATGGTCCATCGCTATTTCGCCGGGACCCTGGCGATGGTGATCGCCCTGCTCGCCTTCCACGCCGTGCGCCGGCATGCCCGCGATGGCCAGCCTTATCGCTTGCCGCTGCTATTGCTGGGGGTCGTGCTGGCCCAGGCGGCGTTCGGCATGTGGACGGTGACCTTGAAACTCTGGCCCCAGGTAGTCACGGCGCACTTGCTCGGGGGCTTCACCACGGTCAGCTTGCTTTTCCTGCTATCCCTGCGTCTATCCCGGGCCTTTGCGCCCTTGCCGAAACTGCCCCTGAGCCTACGCCGTATCGCTGCGTTGGCACTGCTGGTGGTGATCGGCCAGATCGCCTTGGGCGGCTGGGTCAGTTCCAACTATGCGGCGGTGGCCTGTATCGACTTGCCCACCTGCCACGGTCAATGGTGGCCGGCGGCGGACTTCAGCAACGGTTTCCACCTCACCCAGCACGTCGGCCCCAACTACCTGGGCGGGCAGCTGGATAGCGATGCGCGCACGGCAATCCATATCAGCCATCGTCTCGGTGCCTTGTTGGTCACGCTGGTGCTGCTGATGCTCAGCTGGAAGCTGCATCGCAATGGCCTGACCGGCTTGGCGCGCCTGGTACTGCTGGCGCTGGCGCTGCAAATCGGGCTGGGCGTGAGCAACGTGTTGCTGCACCTGCCGCTGGCCGTGGCCGTGGCCCACAACGCTGGCGGCATCCTGCTGCTGCTGAGCATGGTGCTGGTGAACTACCGCATCCGCGTGGCCGACAAAGTACGTGTCGGTCTTGGCTGGCGTCTCACCCCGGTGAGCAACGTCGGGCTCTCCCATCACATGAGGAATGATTCGTGGCGACGCTTCTGA MARPGFRLAVFATLLALLVVLLGAYTRLTHAGLGCPDWPGCYGFISVPKTDAQLAHAELHFPEHPVEEAKGWAEMVHRYFAGTLAMVIALLAFHAVRRHARDGQPYRLPLLLLGVVLAQAAFGMWTVTLKLWPQVVTAHLLGGFTTVSLLFLLSLRLSRAFAPLPKLPLSLRRIAALALLVVIGQIALGGWVSSNYAAVACIDLPTCHGQWWPAADFSNGFHLTQHVGPNYLGGQLDSDARTAIHISHRLGALLVTLVLLMLSWKLHRNGLTGLARLVLLALALQIGLGVSNVLLHLPLAVAVAHNAGGILLLLSMVLVNYRIRVADKVRVGLGWRLTPVSNVGLSHHMRNDSWRRF inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.6.15.1 : Cytochromes ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ; Cytoplasmic Membrane Class 3 PF02628 COX15-CtaA, Cytochrome oxidase assembly protein. This is a family of integral membrane proteins. CtaA is required for cytochrome aa3 oxidase assembly in Bacillus subtilis. COX15 is required for cytochrome c oxidase assembly in yeast.. COG1612 CtaA, Uncharacterized protein required for cytochrome oxidase assembly [Posttranslational modification, protein turnover, chaperones]. Posttranslational modification, protein turnover, chaperones NC_008027 Chromosome PSEEN0064 YP_605875 104779377 Protein 61902 62801 protoheme IX farnesyltransferase Class 3 GTGGCGACGCTTCTGAGCACGGAACGCCCGCGCACCGGCTGGCGCGACTACATGGAGTTGACCAAGCCCAAGGTGGTGGTGCTGATGCTGATCACCTCGCTGGTGGGCATGTTTCTCGCCACCCGCGCCGGCGTCGCCTGGAGCGTGCTGCTGTTCGGCAACCTGGGGATCGGCCTGTGCGCCGGGGGCGCGGCGGTGGTCAACCACGTGGTGGACCGGCGCATCGACGCGCTGATGGCCCGCACCCACAAACGCCCGCTAGCCCAGGGCCGGGTCGCGCCGCTACCGGCCCTGGCCTTCGCCTTGCTGTTGGCAGTGATGGGCCTGGCATTGCTGCTGGCGTTCACCAATACCCTCACCGCCTGGCTGACCCTGGCTTCGCTATTGGGTTATGCGGTGCTCTACACCGGCTTTCTCAAGCGCGCGACGCCGCAGAACATCGTGATCGGCGGCCTGGCCGGCGCGGCCCCGCCGTTGCTGGGTTGGGTGGCGGTGAGCGGGCATGTGAGCGCCGAGCCGCTGTTGCTGGTGCTGATCATTTTCGCCTGGACCCCGCCGCACTTCTGGGCCCTGGCCATCCACCGCAAGGCCGAGTACGAAAAAGCCGATATTCCCATGCTGCCGGTGACCCATGGCGAGCATTACACCGCGCTGCATATCCTGCTCTACACCCTGATTCTGCTGGCTGTCAGCCTGTTGCCCTATGCCATCCACATGAGTGGCCCGCTTTACCTGGCCTGTGCCCTGGCCCTGGGCCTGCGCTTCCTGCATTGGGCCTGGGTGTTGTACCGTGGCACCCGGCCGCACGCGGCGATCAAGACGTTCAAGTACTCTATCGGCTATCTGTTCGCCCTGTTCATCGCGCTGCTCGTTGACCACTACCTGTTGCTGAACCTATGA MATLLSTERPRTGWRDYMELTKPKVVVLMLITSLVGMFLATRAGVAWSVLLFGNLGIGLCAGGAAVVNHVVDRRIDALMARTHKRPLAQGRVAPLPALAFALLLAVMGLALLLAFTNTLTAWLTLASLLGYAVLYTGFLKRATPQNIVIGGLAGAAPPLLGWVAVSGHVSAEPLLLVLIIFAWTPPHFWALAIHRKAEYEKADIPMLPVTHGEHYTALHILLYTLILLAVSLLPYAIHMSGPLYLACALALGLRFLHWAWVLYRGTRPHAAIKTFKYSIGYLFALFIALLVDHYLLLNL inference: non-experimental evidence, no additional details recorded ;inference: ab initio prediction:AMIGene:2.0 ;function prediction: 1.5.3.12 : Heme, porphyrin ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ; 2.5.1.- ; Cytoplasmic Membrane Class 3 GO:0008495 ; TIGR01473 cyoE_ctaB protoheme IX farnesyltransferase equivalog 5.9e-143 2.5.1.- Biosynthesis of cofactors, prosthetic groups, and carriers Heme, porphyrin, and cobalamin PF01040 UbiA, UbiA prenyltransferase family.. COG0109 CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) [Posttranslational modification, protein turnover, chaperones]. Posttranslational modification, protein turnover, chaperones NC_008027 Chromosome PSEEN0065 YP_605876 104779378 Protein 62798 63430 electron transport protein, Sco1/SenC family Class 3 ATGACCCGAACCCAGAAAACCGTCTTCATCCTCGTTGCCCTGGTCGCGCTGATCATGGGCCTGACCGTCAACAAGGTGCTCAGCGACCGCGGTCAGCTGAACCCCACCGAACTGATCGACGCCGGCATCATCCTGTTGCCACAAAGCCGCACGGTGCCAGACGTGAAGATGACCGACCAGAACGGTCAGCCCGTCGCGCTGGACCAGCTCAAGGGCAAATGGTCGTTACTGTTCTTCGGCTACACCTACTGCCCGGACATCTGCCCGACCACCCTCGCCCAGCTTCGCCAGGTGAAGAGCGAGCTGCCCAAGGAGGCCATCGAGCGCCTGCAGGTGGTGTTGGTGAGCGTGGACCCGCACCGTGACACGCCGAACCAGCTCAAGCAGTACCTGGGCTATTTCGACAAGGATTTCGTCGGGGTGGCGGGGTCGATCGAGGACACGCAGAAGCTGGCCAATGCCCTGAGCATTCCGTTCATTCCGGCTGATACCAGCAAGCCGGGGTATACCGTGGACCACAGCGGCAACCTGGCGGTGGTCGGGCCGGATGGGCGCCAGCGCGGGTTCATTCGTGCGCCGTTCAACAACCAGAAGCTGGTGGCGCAGTTGCCGGGGCTGGTCGAACGGGATTGA MTRTQKTVFILVALVALIMGLTVNKVLSDRGQLNPTELIDAGIILLPQSRTVPDVKMTDQNGQPVALDQLKGKWSLLFFGYTYCPDICPTTLAQLRQVKSELPKEAIERLQVVLVSVDPHRDTPNQLKQYLGYFDKDFVGVAGSIEDTQKLANALSIPFIPADTSKPGYTVDHSGNLAVVGPDGRQRGFIRAPFNNQKLVAQLPGLVERD inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 1.4.3 : Electron carrier ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology ; Unknown Class 3 PF02630PF00578 SCO1-SenC, SCO1/SenC. This family is involved in biogenesis of respiratory and photosynthetic systems. SCO1 is required for a post-translational step in the accumulation of subunits COXI and COXII of cytochrome c oxidase. SenC is required for optimal cytochrome c oxidase activity and maximal induction of genes encoding the light-harvesting and reaction centre complexes of R. capsulatus..AhpC-TSA, AhpC/TSA family. This family contains proteins related to alkyl hydroperoxide reductase (AhpC) and thiol specific antioxidant (TSA).. COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems [General function prediction only]. General function prediction only NC_008027 Chromosome PSEEN0066 YP_605877 104779379 Protein 64355 63585 D-methionine-binding lipoprotein MetQ Class 3 ATGAAGAAGCTGCTTGCTGTTGTCGCCGCCGTCGCGGCCTTCTCGGCCCACGCCGAAACCCTGACCGTCGCCGCCACCCCGGTGCCGCACGCCGAGATCCTCAAGTTCGTCCAGCCACAGCTGGCCAAAGAGGGCGTGGAACTGAAGGTCAAGGAATTCACCGACTACATCCAGCCGAACGTGCAGGTTGCGGAAAAACGCCTGGACGCCAACTTCTTCCAGCACCAGCCGTACCTGGACGAGTTCAACAAGGCCAAGGGCACCCAGCTGGTCAGCGTCACCGGCGTGCACCTGGAGCCGCTGGGCGCCTACTCCACCAAGCTGAAGAAGCTCGACGAGCTGGCTGACGGCGCCACCGTGGTCATCCCCAACGACGCCACCAACGGCGGCCGCGCCCTGCTGCTGCTGGACAAGGCCGGCGTGATCAAGCTCAAGGACAACAAGAACATCCTGTCGACCGTGAAGGACATCACCGGCAACGACAAGAAGTTGAAGTTCCGCGAGCTGGAAGCGGCCACCATCCCGCGTGTGCTGACCCAGGTCGACCTGGCGCTGATCAACACCAACTATGCGCTGGAAGCCAAGCTGAACCCGGAGAAGGACGCGCTGGTCATCGAAGGCAGCGACTCGCCTTACGTGAACATCCTGGTTGCCCGCCCGGACAACAAGGACGCGGATGCCATGAAGAAGCTGGCCGCGGCCCTGCACTCGCCTGAGGTGAAGCAGTTCATCACCGAGAAGTACAAGGGCGCGGTGATTCCGGCGTTCTAA MKKLLAVVAAVAAFSAHAETLTVAATPVPHAEILKFVQPQLAKEGVELKVKEFTDYIQPNVQVAEKRLDANFFQHQPYLDEFNKAKGTQLVSVTGVHLEPLGAYSTKLKKLDELADGATVVIPNDATNGGRALLLLDKAGVIKLKDNKNILSTVKDITGNDKKLKFRELEAATIPRVLTQVDLALINTNYALEAKLNPEKDALVIEGSDSPYVNILVARPDNKDADAMKKLAAALHSPEVKQFITEKYKGAVIPAF inference: ab initio prediction:AMIGene:2.0 ;inference: non-experimental evidence, no additional details recorded ;function prediction: 4.3.A.1.p : periplasmic binding component ;Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature