Replicon Accession,Replicon Name,Locus tag,RefSeq Accession,RefSeq GI (protein ID),Category,Start,Stop,Gene name,altGeneName,Product name,altProteinName,Product Name Rating,Nucleotide Sequence,Amino Acid Sequence,comment,evidenceReferences,genomicContext,homology,structureFeature,pathway,ecNumber,functionClass,localization,localizationClassConfidence,geneOntology,tigrfamAccession,tigrfamName,tigrfamFunction,tigrfamIsologyType,tigrfamSignificance,tigrfamEcNumber,tigrfamRole,tigrfamSubRole,pfam,pfamDescription,cog,cogDescription,COG_Category,primaryFunctionClassID
NC_009439,Chromosome,Pmen_0001,YP_001185508,146305043,Protein,82,1566,,,chromosomal replication initiator protein DnaA,,,GTGGAACTATGGCAGCAGTGCGTCGAGCTTCTGCGCGACGAATTGCCGGCTCAGCAATTCAACACCTGGATCCGTCCTCTGCAGGTCGAAGCCGAAGGCGACGAGCTGCGCGTCTACGCGCCCAATCGTTTTGTGCTCGACTGGGTCAACGAAAAGTACCTGAGCCGCCTGCTCGAGTTGCTGGGTGAGCGCGCCGGGGGCCTGGTGCCGGCGCTTTCCTTATTGATAGGCAGCAAGCGAGCGGCTACCGCTCGGGTCGCACCTACCGCGCCCTTGCCTGCCGCAGCGCGTGCGGCGCAGGTTCAGGCAGCCGCCACGGCGAGCAAGCCGGTACCACCGCCCGCCCAGGAAGAACCCTCGCGCGCCAGCTTCGACTCCATGGCCGGCGCCGCGCCGCAGCCACCAACCCCAGCCGTCGCACCGCGTGCCGAGCGCACCGTGCAGGTCGAGGGCGGGCTCAAGCACACCAGTTACCTCAACCGCACCTTCACCTTCGACAATTTCGTCGAGGGCAAGTCCAACCAGTTGGCGCGCGCCGCTGCCTGGCAGGTTGCGGACAATCCCAAGCACGGTTACAACCCGCTGTTCCTTTATGGCGGCGTGGGCCTGGGCAAGACGCACCTGATGCACGCCGTGGGTAACCACCTGCTGGCGAAGAACCCCAACGCCAAGGTGGTGTACCTGCATTCCGAGCGCTTCGTCGCCGACATGGTCAAGGCGCTGCAGCTCAACGCCATCAACGAATTCAAACGCTTCTACCGTTCGGTGGACGCGCTGCTGATCGACGATATCCAGTTCTTCGCCAAGAAAGAGCGTTCCCAGGAAGAGTTCTTCCACACCTTCAACGCCCTGCTCGAAGGCGGCCAACAGGTGATCCTCACCAGCGACCGCTACCCGAAGGAGATCGAAGGCCTGGAAGAGCGCTTGAAGTCTCGTTTCGGCTGGGGCCTGACCGTGGCCGTCGAGCCGCCGGAGCTGGAAACCCGCGTGGCGATCCTGATGAAGAAGGCCGACCAGGCCAAGGTCGAGCTGCCGCACGATGCCGCATTCTTCATTGCCCAGCGCATTCGCTCCAACGTGCGTGAGCTGGAAGGTGCGCTGAAACGGGTGATCGCCCACTCGCACTTCATGGGCCGCGATATCACCATCGAGCTGATCCGCGAATCCCTCAAGGATCTGCTGGCCCTGCAGGACAAGCTGGTCAGCATCGACAATATCCAGCGCACCACGGCCGAGTACTACAAGATCAAGATTTCCGATCTGCTGTCCAAGCGTCGCTCACGCTCCATCGCCCGGCCACGCCAGGTGGCCATGGCATTGTCGAAGGAGCTGACCAACCACAGCCTGCCGGAAATCGGTGTGGCCTTCGGCGGTCGCGATCACACCACGGTATTGCACGCATGCCGTAAGATTGCTGAACTTAGGGAATCCGACGCGGACATCCGCGAGGACTACAAGAACCTGCTGCGCACCCTCACTACCTGA,MELWQQCVELLRDELPAQQFNTWIRPLQVEAEGDELRVYAPNRFVLDWVNEKYLSRLLELLGERAGGLVPALSLLIGSKRAATARVAPTAPLPAAARAAQVQAAATASKPVPPPAQEEPSRASFDSMAGAAPQPPTPAVAPRAERTVQVEGGLKHTSYLNRTFTFDNFVEGKSNQLARAAAWQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLAKNPNAKVVYLHSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFAKKERSQEEFFHTFNALLEGGQQVILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVELPHDAAFFIAQRIRSNVRELEGALKRVIAHSHFMGRDITIELIRESLKDLLALQDKLVSIDNIQRTTAEYYKIKISDLLSKRRSRSIARPRQVAMALSKELTNHSLPEIGVAFGGRDHTTVLHACRKIAELRESDADIREDYKNLLRTLTT,TIGRFAM: chromosomal replication initiator protein DnaAPFAM: Chromosomal replication initiator, DnaA C-terminal domain ;,,,,,,,,Cytoplasmic,Class 3,GO:0006275 ;,TIGR00362 ,DnaA ,chromosomal replication initiator protein DnaA ,equivalog ,2e-174 , ,DNA metabolism ,DNA replication, recombination, and repair ,PF00308 PF08299 ,Bac_DnaA, Bacterial dnaA protein.. Bac_DnaA_C, Bacterial dnaA protein helix-turn-helix domain.. ,COG0593 ,DnaA, ATPase involved in DNA replication initiation [DNA replication, recombination, and repair]. ,DNA replication, recombination, and repair 
NC_009439,Chromosome,Pmen_0002,YP_001185509,146305044,Protein,1601,2704,,,DNA polymerase III, beta subunit,,,ATGCATTTCACCATTCAACGCGAAGCCCTGTTGAAACCCCTGCAACTGGTCGCCGGTGTCGTGGAACGACGCCAGACGCTGCCGGTGTTGTCCAACGTCCTGCTGGTGGTCGAAGGCCAGCAGCTCTCGCTTACCGGTACCGACCTGGAGGTCGAACTGGTTGGCCGCGTCACCCTCGAAGACGCTGCCGAGCCGGGCGAAATCACCGTACCGGCGCGCAAGCTGATGGATATCTGCAAGAGCCTGCCGAGCGATGCGCTGATCGATATCCGCGTCGATGACCAGAAGCTGCTGGTCAAGGCCGGGCGCAGTCGTTTCACCCTGTCGACGCTGCCGGCCAATGACTTCCCCACCGTCGAGGAAGGTCCGGGTTCGCTGACCTTCAACCTGCCGCAGGCCAAGCTGCGTCGCCTGATCGAACGCACCAGCTTCGCCATGGCCCAGCAGGACGTGCGCTACTACCTCAACGGCATGCTGCTGGAGGTGCAAAGCGGCATGCTGCGCGCCGTCGCTACCGACGGTCACCGTCTGGCGATGTGCTCCATGGAGGCGGCCATCCAGCAGGACGGCAAGCATCAGGTGATCGTGCCGCGCAAAGGTATTCTCGAGCTGGCCCGTCTGCTCACCGAGCAGGATGCCGAAGTCGCCATCGTGCTGGGGCAGCACCACATTCGCGCCAACACCGGCGAATTCACCTTCACCTCGAAACTGGTGGACGGCAAGTTCCCGGATTACGAGCGCGTGCTGCCGCGTGGCGGTGACAAGCTGGTGCTGGCCGACCGTCAGGGCCTGCGTGAGGCCTTCAGCCGTACCGCGATCCTGTCCAACGAGAAGTACCGTGGCATTCGTCTGACCCTGGCTGCCGGTCTGCTGAAGATCCAGGCCAACAACCCGGAGCAGGAAGAGGCCGAGGAAGAGATCGTCGTCGACTACGCTGGCGGCGGTCTGGAAATCGGTTTCAACGTCAGCTACCTGCTGGACGTACTGGGCGTGATGGGCACCGAGCAGGTACGCCTGATCCTGTCCGATTCCAACAGCAGTGCCCTGCTGCAGGAAGCCGACAACGATGATTCGGCCTATGTCGTCATGCCGATGAGGCTCTAA,MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVTLEDAAEPGEITVPARKLMDICKSLPSDALIDIRVDDQKLLVKAGRSRFTLSTLPANDFPTVEEGPGSLTFNLPQAKLRRLIERTSFAMAQQDVRYYLNGMLLEVQSGMLRAVATDGHRLAMCSMEAAIQQDGKHQVIVPRKGILELARLLTEQDAEVAIVLGQHHIRANTGEFTFTSKLVDGKFPDYERVLPRGGDKLVLADRQGLREAFSRTAILSNEKYRGIRLTLAAGLLKIQANNPEQEEAEEEIVVDYAGGGLEIGFNVSYLLDVLGVMGTEQVRLILSDSNSSALLQEADNDDSAYVVMPMRL,TIGRFAM: DNA polymerase III, beta subunitPFAM: DNA polymerase III, beta chain ;,,,,,,2.7.7.7 ;,,Cytoplasmic,Class 3,GO:0009360 ;,TIGR00663 ,dnan ,DNA polymerase III, beta subunit ,equivalog ,1.9e-117 ,2.7.7.7 ,DNA metabolism ,DNA replication, recombination, and repair ,PF00712 PF02767 PF02768 ,DNA_pol3_beta, DNA polymerase III beta subunit, N-terminal domain. A dimer of the beta subunit of DNA polymerase beta forms a ring which encircles duplex DNA. Each monomer contains three domains of identical topology and DNA clamp fold.. DNA_pol3_beta_2, DNA polymerase III beta subunit, central domain. A dimer of the beta subunit of DNA polymerase beta forms a ring which encircles duplex DNA. Each monomer contains three domains of identical topology and DNA clamp fold.. DNA_pol3_beta_3, DNA polymerase III beta subunit, C-terminal domain. A dimer of the beta subunit of DNA polymerase beta forms a ring which encircles duplex DNA. Each monomer contains three domains of identical topology and DNA clamp fold.. ,COG0592 ,DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) [DNA replication, recombination, and repair]. ,DNA replication, recombination, and repair 
NC_009439,Chromosome,Pmen_0003,YP_001185510,146305045,Protein,2712,3815,,,DNA replication and repair protein RecF,,,ATGTCCCTGAGCCGCATCATGGTCACCGCGGTGCGCAATCTGCACCCGGTGACCCTCTCCCCCTCCCCCCGCATCAACATCCTTCACGGCGCCAACGGCAGCGGCAAGACCAGCGTGCTCGAGGCCATTCATCTGCTCGGCCTCGCCCGCTCCTTCCGCAGCACCCGCCTGCAGCCTGTCATCCATTACGAACAACCGGCCTGCACCGTTTTTGGCCAGGTGCAGTTGGCCGAAGGTGGCTCCAGCAATCTGGGGATTTCGCGTGACCGTCAGGGCGAGCTGCAGATTCGTATCGACGGGCAGAATGCGCGTAGCGCTGCGCAGCTGGCCGATCTGTTGCCTTTGCAGTTGATCAACCCGGACAGCTTTCGCCTGCTGGAAGGCGCACCGAAGATTCGCAGGCAGTTTCTCGATTGGGGGGTGTTCCACGTGGAACATCGTTTTCTCGGCGCCTGGCAACGCCTGCAGAAAGCCCTGCGGCAGCGGAACTCGTGGCTGCGCCATGGTACACTTGACGGTGCTTCGCAGGCCGCATGGGACCGAGAGCTGTGCAGTGCGAGCCAGGAAATCGACACCTACCGTAGAGCCTATATCCAGGCGCTGAAGCCGGTGTTCGAACGCACGTTGGCGGAACTGCTGCAGCTGGAAGGGTTGACCCTGAGCTATTACCGCGGCTGGGACAAGGATCGTGAGCTGAGCGAAGTGCTCGCCTCGTCTCTCCTTCGTGATCAACAGCTCGGGCATACCCAGGCCGGACCGCAGCGCGCCGATCTGCGTCTGCGGCTTGCGGGGCATAACGCGGCGGAAATCCTGTCGCGAGGACAACAGAAACTGGTGGTGTGTGCGTTGCGCATCGCCCAGGGCCACTTGGTCAATGAAGCCAAGCGTGGCCAATGTATCTATCTGGTGGACGATCTACCGTCGGAACTGGATGAGCAGCATCGTCAGGCATTGTGCCGGTTGCTGGAAGATTTGCACTGCCAGGTGTTCATCACCTGTGTGGATCATGAATTGTTGAGGGAAGGCTGGCACACGGATACGCCGGTTGCCATGTTCCACGTGGAACATGGCCGTATCACCCAGACCCAAGACCATCGGGAGTGA,MSLSRIMVTAVRNLHPVTLSPSPRINILHGANGSGKTSVLEAIHLLGLARSFRSTRLQPVIHYEQPACTVFGQVQLAEGGSSNLGISRDRQGELQIRIDGQNARSAAQLADLLPLQLINPDSFRLLEGAPKIRRQFLDWGVFHVEHRFLGAWQRLQKALRQRNSWLRHGTLDGASQAAWDRELCSASQEIDTYRRAYIQALKPVFERTLAELLQLEGLTLSYYRGWDKDRELSEVLASSLLRDQQLGHTQAGPQRADLRLRLAGHNAAEILSRGQQKLVVCALRIAQGHLVNEAKRGQCIYLVDDLPSELDEQHRQALCRLLEDLHCQVFITCVDHELLREGWHTDTPVAMFHVEHGRITQTQDHRE,TIGRFAM: DNA replication and repair protein RecFPFAM: SMC domain protein ;,,,,,,,,Cytoplasmic,Class 3,GO:0009432 ;,TIGR00611 ,recf ,DNA replication and repair protein RecF ,subfamily ,1.1e-141 , ,DNA metabolism ,DNA replication, recombination, and repair ,PF02463 ,SMC_N, RecF/RecN/SMC N terminal domain. This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.. ,COG1195 ,RecF, Recombinational DNA repair ATPase (RecF pathway) [DNA replication, recombination, and repair]. ,DNA replication, recombination, and repair 
NC_009439,Chromosome,Pmen_0004,YP_001185511,146305046,Protein,3820,6240,,,DNA gyrase, B subunit,,,ATGAGCGAGAATCAAACGTACGACTCCTCCAGCATCAAGGTGCTGAAAGGACTGGACGCCGTACGCAAACGTCCCGGGATGTACATCGGTGACACTGACGATGGCAGTGGTCTGCACCACATGGTGTTCGAGGTGGTCGATAACTCCATCGACGAAGCGCTGGCCGGCTATTGCAGCGAGATCGTCATCACCATTCACCCTGACGAATCGATCAGCGTACGTGACAACGGTCGCGGCATTCCGGTGGACATCCACAAGGAAGAAGGCGTTTCCGCGGCCGAGGTCATCATGACCGTGCTGCACGCCGGCGGTAAGTTCGATGACAACACCTACAAGGTGTCCGGCGGTCTGCACGGCGTGGGTGTATCGGTGGTGAACGCGCTGTCCGAAGAGCTGCGCCTGACCATCCGCCGCGCTGGCAAGGTGTGGGAGCAGATCTATCACCACGGCGTGCCGCAAGCGCCGCTGGCTACTGTCGGCGACACCGATGGCACTGGTACCGAGATTCACTTCAAGGCATCTGCCGAGACCTTCAGCAACATCCATTTCAGCTGGGATATCCTGGCCAAGCGCCTGCGCGAGCTGTCGTTCCTCAACTCCGGCGTGGGCATCCTGCTGCGTGACGAGCGTTCCGGCAAGGAAGAGCTGTTCAAGTACGAAGGCGGTCTGAAGGCCTTCGTCGAGTACCTCAACACCAACAAGAACGTGGTGAACCAGGTATTCCACTTCAACATCCAGCGCGAGGAAGATGGTGTTGGCGTGGAAGTGGCCCTGCAGTGGAACGACAGCTTCAACGAGAACATCCTCTGCTTCACCAACAACATTCCGCAGCGTGACGGTGGTACCCACCTGGCAGGCTTCCGCTCTGCCCTCACCCGCCACCTGAACAACTACATCGAGCAGGAAGGTCTGGCGAAGAAGTTCAAGGTCGCCACCACTGGCGATGACGCCCGTGAAGGCCTGACCGCAATCATCTCGGTCAAGGTGCCGGACCCGAAATTCAGCTCGCAGACCAAGGACAAGCTGGTTTCCAGCGAGGTGAAAACCGCTGTCGAGCAGGAGATGGGCAAGTACTTTGCCGACTTCCTGCTGGAGAATCCCAACGAAGCCAAGGCCGTGGTCGGCAAGATGATCGACGCCGCCCGTGCCCGTGAAGCGGCGCGGAAGGCGCGTGAAATGACCCGCCGCAAGGGCGCTCTGGACATTGCCGGTCTGCCCGGCAAACTGGCCGACTGTCAGGAAAAAGACCCGGCGCTGTCCGAACTCTACATCGTGGAGGGTGACTCCGCGGGCGGTTCTGCCAAGCAGGGCCGTAACCGCAAGACCCAGGCGATCCTGCCGCTCAAGGGCAAGATCCTCAACGTCGAGAAGGCGCGCTTCGACAAGATGCTCTCCTCTGCCGAAGTCGGTACCCTGATCACCGCACTGGGCTGCGGTATCGGACGCGAGGAGTACAACATCGACAAGCTGCGCTACCACAACATCATCATCATGACCGATGCTGACGTTGACGGTTCGCACATCCGTACTCTGCTGCTGACCTTCTTCTTCCGTCAGCTGCCGGAGCTGATCGAGCGTGGCTACGTCTACATCGCCCAGCCGCCGCTGTACAAGGTCAAGAAGGGCAAGCAGGAGCAGTACATCAAGGACGACGAGGCCATGGACGAATACATGACCCAGTCGGCCCTGGAAGACGCCAGCCTGCACGTCAACGAGAACGCTCCTGGCCTGTCCGGCGGTGCTCTGGAGAAGCTGGTTGGTGAATACCGCGGCGTGATGAAGACCCTGGACCGCCTGTCGCGCGTGTATCCGAAGGAAATCACCGAGCACTTCGTCTACCTGCCGCGCATCGGCCTTGAACAGCTAGCTGATCATGCCGGCATGCAGGCCTGGCTGGAGCAGTTCAGCGCCCGTCTGAAGACGATGGAAAAGTCCGGCCAGACCTACACTGCCAGCCTGCGCGAAGACCGCGAGCGCCATGTCTGGCTGCCTGAGGTAGAGGTCAAGGCGCATGGTCTGTCCAGCTACACCACCTTCAACCGCGACTTCTTCGCCAGCAATGACTACAAGACAGTCACGGCCCTGGGCGACCAGCTGAACAACCTGCTGGAAGACAGCGCCTACGTACAGCGCGGCGAACGCAAGAAGCCGGTGGCGACCTTCAAGGAAGCGCTGGACTGGCTGATGGCCGAGAGCACCAAGCGCCACAGTATCCAGCGCTATAAGGGTCTCGGCGAAATGAACCCGGATCAGCTGTGGGAAACCACCATGGATCCGGAAGTGCGACGCATGCTCAAGGTGACCATCGAAGACGCCATCGCGGCGGACCAGATCTTCAACACCCTGATGGGCGACGCCGTGGAGCCGCGCCGCGACTTCATCGAGTCCAATGCCCTGGCGGTGTCGAATCTGGACTTCTGA,MSENQTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGYCSEIVITIHPDESISVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVSVVNALSEELRLTIRRAGKVWEQIYHHGVPQAPLATVGDTDGTGTEIHFKASAETFSNIHFSWDILAKRLRELSFLNSGVGILLRDERSGKEELFKYEGGLKAFVEYLNTNKNVVNQVFHFNIQREEDGVGVEVALQWNDSFNENILCFTNNIPQRDGGTHLAGFRSALTRHLNNYIEQEGLAKKFKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNRKTQAILPLKGKILNVEKARFDKMLSSAEVGTLITALGCGIGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYVYIAQPPLYKVKKGKQEQYIKDDEAMDEYMTQSALEDASLHVNENAPGLSGGALEKLVGEYRGVMKTLDRLSRVYPKEITEHFVYLPRIGLEQLADHAGMQAWLEQFSARLKTMEKSGQTYTASLREDRERHVWLPEVEVKAHGLSSYTTFNRDFFASNDYKTVTALGDQLNNLLEDSAYVQRGERKKPVATFKEALDWLMAESTKRHSIQRYKGLGEMNPDQLWETTMDPEVRRMLKVTIEDAIAADQIFNTLMGDAVEPRRDFIESNALAVSNLDF,TIGRFAM: DNA gyrase, B subunitPFAM: DNA gyrase, subunit B domain protein ;,,,,,,5.99.1.3 ;,,Unknown,Class 3,GO:0009387 ;,TIGR01059 ,gyrB ,DNA gyrase, B subunit ,equivalog ,0 ,5.99.1.3 ,DNA metabolism ,DNA replication, recombination, and repair ,PF00204 PF00986 PF02518 ,DNA_gyraseB, DNA gyrase B. This family represents the second domain of DNA gyrase B which has a ribosomal S5 domain 2-like fold. This family is structurally related to pfam01119.. DNA_gyraseB_C, DNA gyrase B subunit, carboxyl terminus. The amino terminus of eukaryotic and prokaryotic DNA topoisomerase II are similar, but they have a different carboxyl terminus. The amino-terminal portion of the DNA gyrase B protein is thought to catalyse the ATP-dependent super-coiling of DNA. See pfam00204. The carboxyl-terminal end supports the complexation with the DNA gyrase A protein and the ATP-independent relaxation. This family also contains Topoisomerase IV. This is a bacterial enzyme that is closely related to DNA gyrase,.. HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. This family represents the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90.. ,COG0187 ,GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair]. ,DNA replication, recombination, and repair 
NC_009439,Chromosome,Pmen_0005,YP_001185512,146305047,Protein,7438,6506,,,phosphatidate cytidylyltransferase,,,ATGGATCGCAATACCCTGCTGCTGTTCGCCGGTATCGGTGCCCTGCTCCTGCTGGCCAGCCTGGTCGGTTTCGTCCTCAAGCGGCGCAGTGGCGATCAACCCAACCCGGTGATCGACAACCTCAACGCGCGGATCAATGCCTGGTGGGTGATGGTGCTGGTGATCGGCATCGCCTTCCTGTTCGGCAACATCGGCGTCGTGGTGCTGTTCTACTTCGTCTCCTTCTACGCCCTGCGCGAGTTCATGACCCTGACGCCAACCCGGCGCAGCGACTATCCGGCGCTGGTGGCGGCCTTCTATTTCGCCCTGCCGATGCAGTACCTGCTGATCGCCCTGGACTGGTACGGCCTGTTCGCCATCTTCATCCCGGTCTACCTGTTCCTGCTGCTGCCGATCCTTGCCTCGCTGGGCGGCGACACCACGCGTTATCTGGAGCGCGCGGCCAAGGCGCAATGGGGCTTGATGATCGCGGTGTACTGCATCTCCTCGGTACCGGCCCTGCTGACCCTGGACATTCCCGGCTACGAGGGGCGCAACCTGCTGCTGATCGCCTGGCTGATCATCGTCGTGCAGCTCTCCGACGTGCTGCAGTACGTGTGCGGCAAGCTGTTCGGCAAGCACAAGATCGCCCCCAGCCTGTCGCCCTCGAAGACCGTGGAAGGCTTCGTCGGCGGCGTCGCCCTGGCCACGCTGATTGGCGGCCTGCTGTGCTGGATTACTCCCTTCGCCTTCTGGCAGGCGGCACTCTTTGCCCTGCTGGTATGCCTGCTCGGCTTCGCCGGTGGCCTGGTGATGTCGGCGATCAAGCGCGACCGCGGGGTGAAGGACTGGGGCCATATGATCGAAGGCCATGGCGGCATGCTCGACCGCCTGGACTCCGTATGTTTCGCCGCACCGGTGTTCTTCCATATGGTGCGTTACTGGTGGGCCTAG,MDRNTLLLFAGIGALLLLASLVGFVLKRRSGDQPNPVIDNLNARINAWWVMVLVIGIAFLFGNIGVVVLFYFVSFYALREFMTLTPTRRSDYPALVAAFYFALPMQYLLIALDWYGLFAIFIPVYLFLLLPILASLGGDTTRYLERAAKAQWGLMIAVYCISSVPALLTLDIPGYEGRNLLLIAWLIIVVQLSDVLQYVCGKLFGKHKIAPSLSPSKTVEGFVGGVALATLIGGLLCWITPFAFWQAALFALLVCLLGFAGGLVMSAIKRDRGVKDWGHMIEGHGGMLDRLDSVCFAAPVFFHMVRYWWA,PFAM: phosphatidate cytidylyltransferase ;,,,,,,,,Cytoplasmic Membrane,Class 3,,,,,,,,,,PF01148 ,CTP_transf_1, Cytidylyltransferase family. The members of this family are integral membrane protein cytidylyltransferases. The family includes phosphatidate cytidylyltransferase EC:2.7.7.41 as well as Sec59 from yeast. Sec59 is a dolichol kinase EC:2.7.1.108.. ,COG4589 ,COG4589, Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase [General function prediction only]. ,General function prediction only 
NC_009439,Chromosome,Pmen_0006,YP_001185513,146305048,Protein,8063,7440,,,phospholipid/glycerol acyltransferase,,,ATGCTCGCCGCATTGACCGCTTTCGCCATCACCTCGGCAGCTCGCCTGCTGACCGGTGCCCGCGCCCTGTGGCTCGGCAGCACCGCGCAGGCGACGCAGCGCCTGTACTACGCCAATCACAGCAGCCATGGCGACTTCGTCCTGCTCTGGGCGTCGCTGCCGCCGGAGTTGCGCAAGCGCACCCGGCCAGTGGCCGGCGCCGACTACTGGCAGAAGCCGGGCGTGCGCAGCTTCCTGATCAATAACGTGTTCAACGGTGTGCTGGTCGACCGCGAACGCAAGGAGGCAGGCGTCAACCCGCTACAGGCGATGCTCGATGCGCTGGACGGCGGCGACTCGCTGATCATCTTCCCCGAAGGCACGCGCAACCTCGGCGACGAGCCGCTGTTGCCGTTCAAGAGCGGCCTCTATCACCTGGCCCAGGCACGTCCGGAAGTGGAGCTGGTGCCAGTGTGGATCGCCAACCTGAATCGGGTGATGCCCAAGGGCCGCGCACTACCGCTGCCCCTGCTATGCACCCTGAGCTTCGGCGCTGCGCTGGAGCGTATCGAGGGGGAGGGCAAGGAGGCCTTCCTGGAACGCGCACGTAACGCCCTGCTGGCACTGGCACCCGAGGAGGCCTGA,MLAALTAFAITSAARLLTGARALWLGSTAQATQRLYYANHSSHGDFVLLWASLPPELRKRTRPVAGADYWQKPGVRSFLINNVFNGVLVDRERKEAGVNPLQAMLDALDGGDSLIIFPEGTRNLGDEPLLPFKSGLYHLAQARPEVELVPVWIANLNRVMPKGRALPLPLLCTLSFGAALERIEGEGKEAFLERARNALLALAPEEA,PFAM: phospholipid/glycerol acyltransferase ;,,,,,,,,Unknown,Class 3,,TIGR00530 ,AGP_acyltrn ,1-acyl-sn-glycerol-3-phosphate acyltransferases ,subfamily_domain ,1.7e-08 ,2.3.1.51 ,Fatty acid and phospholipid metabolism ,Biosynthesis ,PF01553 ,Acyltransferase, Acyltransferase. This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function. This family also includes tafazzin, the Barth syndrome gene.. ,COG0204 ,PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]. ,Lipid metabolism 
NC_009439,Chromosome,Pmen_0007,YP_001185514,146305049,Protein,8507,8073,,,hypothetical protein,,,ATGCAGGCTGATCTGCTGCTGGTCGCCGCGCTGCTACGACGCGGGCGCAGCCTCGACCATTTTTCCAGCGCGCTGAGTTTGGTTGCCGTGATCTTCGGCCTGGCGCCATGGCTGGGTGCACCGCCAAGCCTGATGCTGGCGCTGCTCTGCGCAGCGCTGCTGATCCTCGGCCTGGCCGAGAAGTACTGGGCGCTGCGCGTGGCGCTGGATGCCGAACTGTTCCAGCGTCTGGCGGAGGCGGGCGAACAGCTCGACGGCCAGACTCATGCGCTGGATCAGGCGCGGCAGAAGCTGGGGCTGCAGAATGCGCAGCTGGCTGGCCGCGACTGGAGCCTGCGCGCTCAGGGTGCGCTCGGCCTGCTACGTAAACAGGCGCTGTGCCTGCTGCTACAGAGCGTCATCGTCGTACTCGGATTCTTCATCGTCTTCGCTTAA,MQADLLLVAALLRRGRSLDHFSSALSLVAVIFGLAPWLGAPPSLMLALLCAALLILGLAEKYWALRVALDAELFQRLAEAGEQLDGQTHALDQARQKLGLQNAQLAGRDWSLRAQGALGLLRKQALCLLLQSVIVVLGFFIVFA,,,,,,,,,Cytoplasmic Membrane,Class 3,,,,,,,,,,,,,,
NC_009439,Chromosome,Pmen_0008,YP_001185515,146305050,Protein,9834,8497,,,dual specificity protein phosphatase,,,ATGGACAACACGCGCGAACAGGGATTGTGGAAGCGCGGCGTACTCTGGCTGCTGTTGCTCGGCCCGCTGTTCTTCGCCAGCTACGGCTTCGCCAACTGGCTGACCGGGCAGCGCGATGATGTCGGCAGCCTGGTCTTCGCCTGGGAACCACAGATCCCGCTGTGGCCCTGGACCATCGTGCCGTACTGGTCGATCGACCTGCTCTATGGCCTGTCCTTCCTGTTGCCGGCCTGCCGCCGCGAGATGGATCGCCACGCCCTGCGCCTGCTCGCCGCGCAGGTGATCTGCGTCGCCTGCTTCCTGCTCTGGCCGCTGCGCTTCACCTTCGAGCGGCCGCCGCTGGACGGCGCCTTCGGCCTGATGTTCGACGTGCTGATGGGCTTCGACAAACCCTTCAACCAGGCGCCGTCGCTGCATATCACCCTGCTGGTAATCATCTGGGCGATGTTCGCCAATCACACCCGCGGCCCGTTCTGGCGTGGCCTGCTGCACGGGTGGATGGCGCTGATCGGCATCTCCGTGCTGACCACCTGGCAGCATCACTTCATCGACCTGCCCACCGGGGCGCTGGCGGGCTTCTTCTGCCTGTGGCTGCTGCCGCTGCAGGGCGCTACGCCGCTTACGCAGATGCGCCTCACCAGCGATCCACGGCGTTGGCGCCTGGCGCTGCGCTATGGGCTTGGCGCAACGCTGAGCGCCGTGCTGGCCGTCAAGCTGGGCGGTGCCTGGCTATGGCTGTTCTGGCCAACCGTTGCCCTGGCCATGGTCGCGCTCAACTACCTGTTGTTCGACGCTGCCGGCTTCCAGAAGCAAGCCAACGGCCGCCTCAGCCCGGCCGCGACAGCGTTGCTCGCGCCCTATCTGCTCGGTGCCTGGATCAACTCGCGGCTATGGACCTATCGCCAGCCAATGCCGAGTCAGGTGGTGGAGGGCATCCATCTTGGCCGCCTGCCCGCCACGGGCGAACTCGGTAGCTATGCCGCCATGGTCGACCTGTGCGCCGAACTGCCGCTGCTGCGCACACCTAGCGCCTACTGCAGTCTGCCGTCACTGGACCTGGTGACGCCGGATGCGCTGACCTGCCAACGCGCCGCCGAGGCCATCGAACGTCTGCGCCACGAGGGCCCGCTGCTGGTGTGCTGCGCCCTGGGCTATTCGCGCAGTGCCACAGCCGTGGCCGCCTGGCTGCTGCACAGCGGCCGCTGCCAGAGCGTGGATGCGGCCGTGGCGCTGATCCGCCAGGCGCGGCCACAGGTCGTGCTTGGCCCGCAGCACCTGGCCGCACTGCAGGGCATGCTCGTTGCCAGCCCGGCCCTGGAGGTCGCACATGCAGGCTGA,MDNTREQGLWKRGVLWLLLLGPLFFASYGFANWLTGQRDDVGSLVFAWEPQIPLWPWTIVPYWSIDLLYGLSFLLPACRREMDRHALRLLAAQVICVACFLLWPLRFTFERPPLDGAFGLMFDVLMGFDKPFNQAPSLHITLLVIIWAMFANHTRGPFWRGLLHGWMALIGISVLTTWQHHFIDLPTGALAGFFCLWLLPLQGATPLTQMRLTSDPRRWRLALRYGLGATLSAVLAVKLGGAWLWLFWPTVALAMVALNYLLFDAAGFQKQANGRLSPAATALLAPYLLGAWINSRLWTYRQPMPSQVVEGIHLGRLPATGELGSYAAMVDLCAELPLLRTPSAYCSLPSLDLVTPDALTCQRAAEAIERLRHEGPLLVCCALGYSRSATAVAAWLLHSGRCQSVDAAVALIRQARPQVVLGPQHLAALQGMLVASPALEVAHAG,PFAM: phosphoesterase, PA-phosphatase related ;,,,,,,,,Cytoplasmic Membrane,Class 3,,,,,,,,,,PF00782 ,DSPc, Dual specificity phosphatase, catalytic domain. Ser/Thr and Tyr protein phosphatases. The enzyme's tertiary fold is highly similar to that of tyrosine-specific phosphatases, except for a "recognition" region.. ,COG2453 ,CDC14, Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]. ,Signal transduction mechanisms 
NC_009439,Chromosome,Pmen_0009,YP_001185516,146305051,Protein,11588,9834,,,alpha/beta hydrolase fold,,,ATGCGCCCCGTACAACTGCATACCTTCACCACCCATGACGGCGTCGAACTGAGCTATTGCCACTGGCCGGCAACCGTGCCGGCGGACGGCTCACGTCAGGCCGTGGTGCTGTTTCATCGTGGCCACGAGCACGGCGGGCGCATGGCTCACCTAGTGGACGAGCTGGAGCTGCCGCACTGCGATTTCTTCGCCTGGGACGCCCGCGGCCATGGCCTGTCGCCCGGTGCGCGCGGCGACAGCCCGAGCTTCGCCACCAGCGTGCGCGACGTGCAGACCTTTATCGAGCATATCGGCAGCGCACACGGCATCGCCGAAGAGGACCTGTCGGTGGTGGCGCAAAGCGTCGGCGCGGTGATCGTCTCCACCTGGGCCCATGACTACGCGCCGAAGGTGCGCTGCCTGGTGCTCGCCTCGCCGGCGTTCAAGGTCAAACTCTACGTGCCCTTCGCCCGGCCCGGGCTGAAGCTGCTGCACGCCTGGCGCGGCAACTTCTTCGTCAACAGCTACGTGAAGGCGAGGTTCCTCAGCCACGATCCCGAGCGCATCGCCTCCTTCGAGAACGACTCGCTGATCGCCCGGCCGATCTCGGTGACCATGCTGCTCGGCCTGTACGAGGCCGCCGAGCGCGTCGTCGCCGACGCCCAGGCGATCCAGGTGCCGACCCAGCTGCTGATCTCCGGCGCCGACTTCGTCGTCCACCGCAAACCGCAGGAGGACTTCTTCGAGCGTCTCGGCAGCCTGCGCAAGGAAAAACACCTGCTGCCCGGCTTCTTCCACGACACCCTTGGCGAGCGCGACCGCGCCCATGCCCTGAGCCGCGCGCGGCGCTTTATCCTGCGCAACTTCGAGGAGCCGGTGACGCGCCCCTCGCTGCTCGATGCCGATCGCCTGGGCGCCACCTGCGCCGAAGCCGAAGCGCTGGCCGCGCCGCTGCCAAGGAACTCGCTGCGCGACCTCTACTGGCGTGCCACCCGTGCCGGCATGCGCCTGGGCAGTACGCTGTCGGCCGGAGTGAAGCTGGGCTTCGACACCGGCTTCGATTCTGGCAGCACCCTCGATTACGTCTACCGCAACCAGCCCACCGGCAAGGGCGCGCTGGGCCGCCTGATCGATGCGAACTACCTGGATTCCATCGGCTGGCGCGGCATCCGCCAGCGCAAGCTGCACGCCGAGGAACTGCTGCGCCTGGCCATGACCAGGCTGCGTGAGACGGGCAGGGCGGTGCGCATCGTCGATATCGCCGCCGGCCACGGCCGCTACATCCTCGAATCGCTGGAAGGCCAGCAGCAGCGCCCAGATTCGATCCTGCTGCGCGACTACAGCGACATCAACGTGCGTGACGGCAATGCCCTGATCGAGCAGAAGGGCCTGGCCGACATCGCCCGCTTCGTCAAAGGCGATGCCTTCGACCGTGAGGATCTCGCTGCGCTGGAGCCGAAACCGACCCTGGCAGTGGTCTCCGGCCTGTACGAGCTGTTCGGCAGCAACCAGATGGTCGGCGACTCGCTGGCCGGGCTGGCGGCGGCGGTGGAGGAGGGTGGTTATCTGGTCTACACCGGCCAGCCCTGGCACCCGCAGCTGGAGCTGATCGCCCGCGCCCTGACCAGCCACCGCGACGGCCAGGCCTGGGTCATGCGCCGGCGCAGCCAGGCGGAGATGGATCAGCTGGTGGAAGCGGCGGGCTTTCGCAAGGTGGCGCAGCGCATCGACCAGTGGGGCATCTTCAGCGTATCCCTGGCGCAGCGGGTGAAGTGA,MRPVQLHTFTTHDGVELSYCHWPATVPADGSRQAVVLFHRGHEHGGRMAHLVDELELPHCDFFAWDARGHGLSPGARGDSPSFATSVRDVQTFIEHIGSAHGIAEEDLSVVAQSVGAVIVSTWAHDYAPKVRCLVLASPAFKVKLYVPFARPGLKLLHAWRGNFFVNSYVKARFLSHDPERIASFENDSLIARPISVTMLLGLYEAAERVVADAQAIQVPTQLLISGADFVVHRKPQEDFFERLGSLRKEKHLLPGFFHDTLGERDRAHALSRARRFILRNFEEPVTRPSLLDADRLGATCAEAEALAAPLPRNSLRDLYWRATRAGMRLGSTLSAGVKLGFDTGFDSGSTLDYVYRNQPTGKGALGRLIDANYLDSIGWRGIRQRKLHAEELLRLAMTRLRETGRAVRIVDIAAGHGRYILESLEGQQQRPDSILLRDYSDINVRDGNALIEQKGLADIARFVKGDAFDREDLAALEPKPTLAVVSGLYELFGSNQMVGDSLAGLAAAVEEGGYLVYTGQPWHPQLELIARALTSHRDGQAWVMRRRSQAEMDQLVEAAGFRKVAQRIDQWGIFSVSLAQRVK,PFAM: alpha/beta hydrolase fold ;,,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,PF00561 ,Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.. ,COG2267 ,PldB, Lysophospholipase [Lipid metabolism]. ,Lipid metabolism 
NC_009439,Chromosome,Pmen_0010,YP_001185517,146305052,Protein,12219,11614,,,CDP-alcohol phosphatidyltransferase,,,ATGCCTTCGATCTACCAGCTCAAACCCGCCTTCCAGAACCTGCTGCGCCCCGGCGTCGAACGTCTTTACGCGCGCGGCGTCACCGCCAACCAGGTGACCCTGGCCGCCGCCCTCATCTCCGTGCTGCTCGGCGTTCTACTCGCAGCCTTCAGCCATGTCGTCTGGCTGTTCGCCTTGATCCCCCTGTGGATGCTGCTGCGCATGGCGCTCAATGCCGTCGACGGCATGCTCGCGCGCGAGTTCGGCCAGCAGTCGAAGCTCGGCGCCTACCTCAACGAGCTGTGCGACGTAGTTGCCGACAGTGCGCTGTATCTGCCTTTCGCCCTGCTGCCCGGCGTCTCGCCGCTACTGGTGGTGACCGTGGTGCTACTGGCGGTGATCAGCGAGTACGCCGGCGTGCTCGGGCCCATGATCGGCGCCTCCCGCCGCTATGACGGGCCCATGGGCAAGAGCGACCGCGCCTTCTGCTTCGGCGTGCTCGGTGCCGGCGTCGCCACGGGCCTGCTGCCTGCCTTGTGGATCAACCTGCTGCTGGCGCTGATCCTGGTCTTGCTGCTCTACACGCTCTACAACCGCGTTCGCCAGGGGTTGGCCGAAGCGGCCTGA,MPSIYQLKPAFQNLLRPGVERLYARGVTANQVTLAAALISVLLGVLLAAFSHVVWLFALIPLWMLLRMALNAVDGMLAREFGQQSKLGAYLNELCDVVADSALYLPFALLPGVSPLLVVTVVLLAVISEYAGVLGPMIGASRRYDGPMGKSDRAFCFGVLGAGVATGLLPALWINLLLALILVLLLYTLYNRVRQGLAEAA,PFAM: CDP-alcohol phosphatidyltransferase ;,,,,,,,,Cytoplasmic Membrane,Class 3,,,,,,,,,,PF01066 ,CDP-OH_P_transf, CDP-alcohol phosphatidyltransferase. All of these members have the ability to catalyse the displacement of CMP from a CDP-alcohol by a second alcohol with formation of a phosphodiester bond and concomitant breaking of a phosphoride anhydride bond.. ,COG0558 ,PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism]. ,Lipid metabolism 
NC_009439,Chromosome,Pmen_0011,YP_001185518,146305053,Protein,13197,12430,,,phospholipid/glycerol acyltransferase,,,ATGGCGATATTGCAGGCTCTCAGAATCACGCTTTTCTACCTGCTGCTGTCGTCCAGTTCGTTCTTCTGGTGCCTGATCAGCCTGGTGGTCGCGCCCTTTTTGCCGTTCCGCCAACGCTACCGTTTCGTCGTTCAGGCCTGGTGCAGCTGCGCCGTGTGGCTGGCGAGAGTGATCGTCGGCATTCGCTACGAAGTGCGCGGCCTGGAGAACATCCCCGAACGTCCCTGCGTGATCCTCGCCAACCACCAGAGCACCTGGGAAACCTTCTTTCTTTCCTCCTACTTCGAACCCCTCAGCCAGGTGGTCAAGCGCGAACTGCTGCGCGTGCCGTTCTTCGGCTGGGGCATGGCGCTGCTCAAGCCCATCGCCATCGACCGCAGCAACCCCAAGGCGGCGCTCAAGCAACTGGCCAAGCAGGGCGAAGAGCGCCTCAAACAGGGCGCCTGGGTGCTGGTGTTCCCCGAAGGCACGCGCATTCCTCCTGGACAGATCGGCAAGTTCTCCCGCGGCGGTACGTCCCTGGCGGTGAATGCCGGCCTGCCGGTACTGCCCATCGCGCACAATGCCGGTGAATTCTGGCCCAAGGCAGGCTGGGGCAAACGCCCGGGTACCATCCAGGTGATCATCGGCCAGCCAATGTACGCCGAGGGTGAAGGCCCGCGCGCCATCGCCGAACTCAACGAGCGCGCCTTCCAGTGGGTGTGCCGACAGCAGACCGAACTGCGTGGCGAGGAGCCGCAGCTCAGCCGTCTGAGCGAGCCGGTCTGA,MAILQALRITLFYLLLSSSSFFWCLISLVVAPFLPFRQRYRFVVQAWCSCAVWLARVIVGIRYEVRGLENIPERPCVILANHQSTWETFFLSSYFEPLSQVVKRELLRVPFFGWGMALLKPIAIDRSNPKAALKQLAKQGEERLKQGAWVLVFPEGTRIPPGQIGKFSRGGTSLAVNAGLPVLPIAHNAGEFWPKAGWGKRPGTIQVIIGQPMYAEGEGPRAIAELNERAFQWVCRQQTELRGEEPQLSRLSEPV,PFAM: phospholipid/glycerol acyltransferase ;,,,,,,,,Cytoplasmic Membrane,Class 3,,TIGR00530 ,AGP_acyltrn ,1-acyl-sn-glycerol-3-phosphate acyltransferases ,subfamily_domain ,3.1e-26 ,2.3.1.51 ,Fatty acid and phospholipid metabolism ,Biosynthesis ,PF01553 ,Acyltransferase, Acyltransferase. This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function. This family also includes tafazzin, the Barth syndrome gene.. ,COG0204 ,PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]. ,Lipid metabolism 
NC_009439,Chromosome,Pmen_0012,YP_001185519,146305054,Protein,13741,13211,,,histidinol-phosphate phosphatase family protein,,,ATGAAACTGCTGATCCTCGACCGCGACGGTGTCATCAATGAAGACTCCGACGCCTACATCAAGACGCTCGACGAGTGGATTCCGATTGCCTCGTCGATCACCGCCATCGCGCGCCTGTCGCAAGCGGGCTGGACGGTGGCCGTGGCCACCAACCAGTCCGGCATCGCCCGTGGCTATTACGACCTGGCGACCCTGGAGTCGATGCACGCGCGCCTGCGCGAGCTGGTGGGCGAGCAGGGCGGCGAAGTCGGGCTGATCGTCTACTGCCCGCACGGGCCGGACGATGGCTGCGAGTGCCGCAAGCCCAAGGCGGGCATGCTCAGGCAGATTGCCGCGCACTACGGCACGGATCTGGCAGGAATCTGGTTCGTCGGCGACAGCAGCGGTGACCTGCAGGCCGCACTGGCCGTCGATTGTCAGCCCGTTCTGGTAAAGACTGGCAAGGGCGAACGTACCCTGGCCAAGCCGTTACCGCCGGGAACTCTGGTATTCGATGATCTGGCGGCGGTCGCCGATCAACTGCTCTCATAA,MKLLILDRDGVINEDSDAYIKTLDEWIPIASSITAIARLSQAGWTVAVATNQSGIARGYYDLATLESMHARLRELVGEQGGEVGLIVYCPHGPDDGCECRKPKAGMLRQIAAHYGTDLAGIWFVGDSSGDLQAALAVDCQPVLVKTGKGERTLAKPLPPGTLVFDDLAAVADQLLS,TIGRFAM: histidinol-phosphate phosphatase family protein ;,,,,,,,,Unknown,Class 3,,TIGR01656 ,Histidinol-ppas ,histidinol-phosphate phosphatase family domain ,No data ,8.8e-50 , ,No data ,No data ,PF08645 ,PNK3P, Polynucleotide kinase 3 phosphatase. Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin.. ,COG0241 ,HisB, Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]. ,Amino acid transport and metabolism 
NC_009439,Chromosome,Pmen_0013,YP_001185520,146305055,Protein,15865,13811,,,Glycine--tRNA ligase,,,ATGAGTGCGAAAGATTTCCTGGTCGAACTGGGCACCGAAGAGCTGCCACCGAAAGCCCTGAAAAGCCTCGGTGATGCCTTCCTCGCCGGTATCGAGAAAGGCCTCAAGGCCGCCGGCCTGAACTACGCCGCCAGCCGCGTATATGCGGCGCCGCGGCGCCTGGCGGTGCTGGTGGAGCAGCTGGAAGAGCAGCAGGCCGACCGCAGCATGAACCTCGACGGTCCGCCCATCCAGGCCGCCTTCGATGCCGACGGCAACCCGACCCAGGCCGCCCTGGGCTTTGCCCGCAAATGCGGCGTGGACATCGCCGAGATCGACCGCAGCGGCGCGAAACTGCGTTTCGCCCAGCACATCCCCGGCCAGCCGGCGGTGAACCTGCTGCCGACCATCGTGCAGGACTCGCTGAACGACCTGCCGATTCCCAAGCGCATGCGCTGGGCCGCCCGTCGCGACGAGTTCGTGCGTCCGACCCAGTGGCTGGTGATGCTGTTCGGCGACGCCGTGGTCGACTGCGAGATCCTCGCGCAGAAGGCCGGTCGCGTGTCCCGTGGCCATCGCTTCCACGCCAACCGCGAAGTGCGCATCAGCAGCCCGGCGAACTACGCCGAAGACCTGCGCAGCGCCTATGTGCTGGCCGACTTCGCCGAGCGCCGCGAGATCATCAGCCGCCGCGTCGACGAGCTGGCCGCCGCCGAGCAGGGCACGGCCATCGTACCCCCGGCGCTGCTGGACGAAGTGACCGCCCTGGTGGAATGGCCGGTGCCGCTGGTCTGCTCCTTCGAGGAGCGCTTCCTCGAGGTGCCGCAGGAGGCGCTGATCAGCACCATGCAGGACAACCAGAAGTACTTCTGCCTGCTCGATGCGGGCGGCAAGCTGCTGCCGCGCTTTATCACCGTGGCGAACATCGAAAGCAAGGACCCGGCGCAGATCGTCTCGGGCAACGAGAAAGTCGTGCGTCCGCGCCTGACCGACGCCGAGTTCTTCTTCAAGCAGGACAAGAAGCAGAAGCTCGAAGGCTTCAACCAGCGCCTGGCCAACGTGGTGTTCCAGGCCCAGCTCGGCTCGGTGTTCGACAAGGCCCAGCGGGTATCGGCGCTGGCCGGTTTCATCGCCCGCGAAGTCGGCGGCGACGAGGCCCGCGCCGCCCGTGCCGGCCTGCTGTCCAAGTGCGACCTGGCCACCGAGATGGTCGGCGAATTCCCCGAGATGCAGGGCATCGCCGGCTACTACTACGCGCTCAACGACGGTGAGCCGCAGGACGTCGCCCTGGCCCTGAACGAGCAGTACATGCCGCGCGGTGCCGGCGCCGAATTGCCGAGCACCCTGACCGGTGCCGCCGTGGCCGTGGCCGACAAGCTCGACACCCTGGTCGGCATCTTCGGCATCGGCATGCTGCCGACCGGCTCGAAGGACCCCTACGCCCTGCGTCGCGCCGCCCTCGGCGTGCTGCGCATCCTGATCGAGAAGGGCCTGGATCTGGACCTGGCCGCCGCGGTCGACTTCGCCGTCGCCCAGTACGCCGGCAAGGTCAAGAGCGACGGCCTGGCCGCCCAGGTGCTGGAGTTCATCTTCGACCGCCTGCGTGCACGCTACGAAGACGAAGGTATCGAAGTGGCCGTGTACCAGGCCGTGCGCGCGGTCAATCCGACCTCGCCGCTGGACTTCGACCAGCGCGTGCAGGCCGTGCAGGCCTTCCGCAAGCTGCCGCAGGCCGAGGCCCTGGCCGCTGCCAACAAGCGCGTGTCGAACCTGCTGAGCAAGGCCGAAGGTGGCGTCGCCGCCCAGGTCGAGGCGCACTACTTCGACAACCCCAGCGAGTTCGCCCTGCACGCCGCCATCCAGCAGGCAGACCAGGCCGTACAGCCGCTGGCCGCCGCCCGCCAGTACAACGAGGCCCTGGCCAAGCTGGCCAGCCTGCGCGAGCCGGTGGACGCCTTCTTCGAGGCGGTGCTGGTCAACGCCGAGGATGCGCGCGTGCGCGCCAACCGTTACGCCCTGCTGGCCCGTCTGCGCGGGCTGTTCCTCGGCGTGGCGGACATCTCGGTACTGGGCTGA,MSAKDFLVELGTEELPPKALKSLGDAFLAGIEKGLKAAGLNYAASRVYAAPRRLAVLVEQLEEQQADRSMNLDGPPIQAAFDADGNPTQAALGFARKCGVDIAEIDRSGAKLRFAQHIPGQPAVNLLPTIVQDSLNDLPIPKRMRWAARRDEFVRPTQWLVMLFGDAVVDCEILAQKAGRVSRGHRFHANREVRISSPANYAEDLRSAYVLADFAERREIISRRVDELAAAEQGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALISTMQDNQKYFCLLDAGGKLLPRFITVANIESKDPAQIVSGNEKVVRPRLTDAEFFFKQDKKQKLEGFNQRLANVVFQAQLGSVFDKAQRVSALAGFIAREVGGDEARAARAGLLSKCDLATEMVGEFPEMQGIAGYYYALNDGEPQDVALALNEQYMPRGAGAELPSTLTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKGLDLDLAAAVDFAVAQYAGKVKSDGLAAQVLEFIFDRLRARYEDEGIEVAVYQAVRAVNPTSPLDFDQRVQAVQAFRKLPQAEALAAANKRVSNLLSKAEGGVAAQVEAHYFDNPSEFALHAAIQQADQAVQPLAAARQYNEALAKLASLREPVDAFFEAVLVNAEDARVRANRYALLARLRGLFLGVADISVLG,,,,,,,6.1.1.14 ;,,Cytoplasmic,Class 3,GO:0009345 ;,TIGR00211 ,glyS ,glycyl-tRNA synthetase, beta subunit ,equivalog_domain ,8.2e-231 ,6.1.1.14 ,Protein synthesis ,tRNA aminoacylation ,PF02092 PF05746 ,tRNA_synt_2f, Glycyl-tRNA synthetase beta subunit.. DALR_1, DALR anticodon binding domain. This all alpha helical domain is the anticodon binding domain in Arginyl and glycyl tRNA synthetase. This domain is known as the DALR domain after characteristic conserved amino acids.. ,COG0751 ,GlyS, Glycyl-tRNA synthetase, beta subunit [Translation, ribosomal structure and biogenesis]. ,Translation, ribosomal structure and biogenesis 
NC_009439,Chromosome,Pmen_0014,YP_001185521,146305056,Protein,16809,15862,,,Glycine--tRNA ligase,,,GTGAGCCAGAACAAGCCTGCCGTGCGCACCTTCCAGGACCTGATCCTGGCCCTGCAGAACTACTGGGCCGAGCAGGGCTGCGTGGTGCTGCAACCCTACGACATGGAAGTGGGCGCCGGCACCTTCCACACCGCCACCTTCCTGCGCGCCGTCGGCCCCGAGACCTGGAACGCCGCCTACGTGCAGCCGTCCCGTCGCCCGACCGACGGCCGCTACGGCGAAAACCCCAACCGCCTGCAGCACTATTACCAGTTCCAGGTGGTCTTGAAGCCCAACCCGGAGAACTTCCAGGAGCTGTACCTGGGTTCGCTCAAGGCCATCGGCCTCGACCCGGAAGTGCACGACATCCGCTTCGTCGAGGACAACTGGGAATCGCCCACACTCGGCGCCTGGGGCCTGGGCTGGGAAATCTGGCTCAACGGCATGGAAGTCACCCAGTTCACCTACTTCCAGCAGGTCGGCGGCATCGAGTGCTACCCGGTGACCGGCGAGATCACCTATGGCCTGGAGCGCCTGGCCATGTACCTGCAGGGCGTCGACTCGGTCTACGACCTGATCTGGACCGACGGCCCGTTCGGCACCGTGACTTACGGCGACGTGTTCCACCAGAACGAGGTGGAGCAGTCCACCTACAACTTCGAGCACGCCAACGTCGAGAAGCTGTTCGAGCTGTTCGACTTCTACGAGAGCGAAGCCAACCGCCTGATCGAGCTGGAGCTGCCGCTGCCGACCTACGAGATGGTGCTCAAGGCCTCGCACACCTTCAATCTGCTCGACGCCCGTCGCGCCATTTCGGTGACCGCGCGCCAGCAGTACATCCTGCGCGTGCGCACCCTGGCCCGTGCGGTAGCGCAGAGCTACCTGCAGGCGCGCGCCAAGCTCGGCTTCCCCATGGCCACCCCCGAACTGCGTGACGAAGTACTGGCCAAGCTGGAGGCGCAAGCATGA,MSQNKPAVRTFQDLILALQNYWAEQGCVVLQPYDMEVGAGTFHTATFLRAVGPETWNAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVLKPNPENFQELYLGSLKAIGLDPEVHDIRFVEDNWESPTLGAWGLGWEIWLNGMEVTQFTYFQQVGGIECYPVTGEITYGLERLAMYLQGVDSVYDLIWTDGPFGTVTYGDVFHQNEVEQSTYNFEHANVEKLFELFDFYESEANRLIELELPLPTYEMVLKASHTFNLLDARRAISVTARQQYILRVRTLARAVAQSYLQARAKLGFPMATPELRDEVLAKLEAQA,PFAM: glycyl-tRNA synthetase, alpha subunit ;,,,,,,6.1.1.14 ;,,Cytoplasmic,Class 3,GO:0009345 ;,TIGR00388 ,glyQ ,glycyl-tRNA synthetase, alpha subunit ,equivalog_domain ,1.3e-168 ,6.1.1.14 ,Protein synthesis ,tRNA aminoacylation ,PF02091 ,tRNA-synt_2e, Glycyl-tRNA synthetase alpha subunit.. ,COG0752 ,GlyQ, Glycyl-tRNA synthetase, alpha subunit [Translation, ribosomal structure and biogenesis]. ,Translation, ribosomal structure and biogenesis 
NC_009439,Chromosome,Pmen_0015,YP_001185522,146305057,Protein,17057,17623,,,DNA-3-methyladenine glycosylase I,,,ATGCCCCGCTGCTTCTGGTGTACCGACGATCCGCTGTATCAGGCCTACCACGACGAGGAATGGGGCGTGCCGCAGCGCGATGCGCGCCAGCTGTTCGAGATGCTGCTGCTCGAAGGCGCCCAGGCCGGGCTGTCGTGGATCACCGTGCTGAAGAAGCGCGAGCGCTACCGCCAGGTGCTGCATGGCTTCGACCCCGAACGCCTGGCGCGTTTGAGCGACGAGGAAATCGAGGCGCTGATGCAGGAGCCTGGCATCATCCGCAACCGCCTCAAGCTCAAGGCCGTGCGGCAGAACGCCCAGGCCTGGCTGAAGCTGGAGGATCCGGTGAGCTGGCTCTGGTCCTTCGTCGGCGGCGCGCCGAAGATCAACCATTTCAGCGACCGCAGCCAGATGCTGGCAGTGACGCCCGAGGCCGAGGCGATGAGCAAGGCGTTGCGCAAGGCCGGCTTCAACTTCGTCGGGCCGACCATCTGCTATGCCTTCATGCAGGCCACGGGCATGGTGATGGACCACACCACCGACTGCGACCGTTACCCCGAATTGAGCGGTTCGGCGGCGACTGCCTGA,MPRCFWCTDDPLYQAYHDEEWGVPQRDARQLFEMLLLEGAQAGLSWITVLKKRERYRQVLHGFDPERLARLSDEEIEALMQEPGIIRNRLKLKAVRQNAQAWLKLEDPVSWLWSFVGGAPKINHFSDRSQMLAVTPEAEAMSKALRKAGFNFVGPTICYAFMQATGMVMDHTTDCDRYPELSGSAATA,TIGRFAM: DNA-3-methyladenine glycosylase IPFAM: methyladenine glycosylase ;,,,,,,3.2.2.20 ;,,Unknown,Class 3,GO:0008725 ;,TIGR00624 ,tag ,DNA-3-methyladenine glycosylase I ,subfamily ,4.5e-119 ,3.2.2.20 ,DNA metabolism ,DNA replication, recombination, and repair ,PF03352 ,Adenine_glyco, Methyladenine glycosylase. The DNA-3-methyladenine glycosylase I is constitutively expressed and is specific for the alkylated 3-methyladenine DNA.. ,COG2818 ,Tag, 3-methyladenine DNA glycosylase [DNA replication, recombination, and repair]. ,DNA replication, recombination, and repair 
NC_009439,Chromosome,Pmen_0016,YP_001185523,146305058,Protein,17672,18604,,,lipid A biosynthesis acyltransferase,,,ATGGCAGGTACAATGCCGGCTTTTCATGCAACCCTGGAGTCATTCGTGGAAGCATTCAAAGGCCGGCTGGTGGTCGGCTTTCTCCGTCTGTTCGCCCTGCTGCCCTGGCGCGCCGTGCAAGCGGTGGGCAATGCCATCGGCTGGCTGATGTGGAAATTGCCCAACGGCTCGCGCGACGTGGTGCGCATCAACCTGAGCAAGTGCTTTCCCGAGCTGAACCAGGCCGAACTGGATCGTCTGGTCGGGCAGAGCCTCAAGGACATCGGCAAGACCCTGACCGAAAGCGCCTGCGCCTGGATCTGGCCGGCGCAGAAATCGCTCAAGCTGATCCGCGAAGTGGAAGGCCTGGAGGTGCTGCAGCAGGCGCTGGCCTCGGGCAAGGGCGTGGTGGGCATCACCAGCCACCTGGGCAACTGGGAAGTGCTCAACCACTTCTACTGCAACCAGTGCAAACCGATCATTTTCTACCGCCCGCCCAAGCTCAAGGCCGTCGACGAGCTGCTGCAGCAGCAGCGCGTGCAGATGGGCAACCGCGTGGCGCCCTCGACCAAGGAAGGCATCCTCAGCGTCATCAAGGAAGTGCGCAAGGGCGGCGCCGTGGGCATTCCGGCCGATCCGGAGCCGAGCCGTTCCGCCGGCGTTTTCGTGCCCTTTCTCGGCACCACTGCGCTGACCAGCAAGTTCGTCCCGGGCATGCTCACCGGCGGCAAGGCGGTGGGTGTATTCCTGCATGCGCTGCGTCTGCCCGATGGCAGCGGCTACAAGGTGATCCTCGAGGCGGCGCCCGAAGGCATGTACAGCGAGAACGTGGAAGAAGGCGTGGCGGCGATGAGCGAAGTGGTGTCGCGCTACGTACGCAACTACCCGAGCCAGTACATGTGGAGCATGAAGCGCTTCAAGAAGCGTCCGGACGGCGAGGCCAAGTGGTACTGA,MAGTMPAFHATLESFVEAFKGRLVVGFLRLFALLPWRAVQAVGNAIGWLMWKLPNGSRDVVRINLSKCFPELNQAELDRLVGQSLKDIGKTLTESACAWIWPAQKSLKLIREVEGLEVLQQALASGKGVVGITSHLGNWEVLNHFYCNQCKPIIFYRPPKLKAVDELLQQQRVQMGNRVAPSTKEGILSVIKEVRKGGAVGIPADPEPSRSAGVFVPFLGTTALTSKFVPGMLTGGKAVGVFLHALRLPDGSGYKVILEAAPEGMYSENVEEGVAAMSEVVSRYVRNYPSQYMWSMKRFKKRPDGEAKWY,PFAM: lipid A biosynthesis acyltransferase ;,,,,,,,,Unknown,Class 3,GO:0009245 ;,TIGR02207 ,lipid_A_htrB ,lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase ,subfamily ,2.3e-16 ,2.3.1.- ,Cell envelope ,Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides ,PF03279 ,Lip_A_acyltrans, Bacterial lipid A biosynthesis acyltransferase.. ,COG1560 ,HtrB, Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane]. ,Cell envelope biogenesis, outer membrane 
NC_009439,Chromosome,Pmen_0017,YP_001185524,146305059,Protein,18721,18987,,,type IV pilus assembly PilZ,,,ATGTCGAACCAGCGTCACCAGGTACGAACCCCGATGAAGTGCCGGATCAAGATCAGCCACCCGAGTTTCGGCGAGCTGGTGGCACAGACCCGCGACCTGTCCGATAGCGGTGTCTATGTGAAGCACCCCGACATGACGAGCCTGACCGTCGGTGCCGAAGTGACCGGCCAGGTGCAGGACCTGCCGTTCCCCGCTCCGGTGTTGAAGATGGAGGTGGTGCGTGTGGACTCCGAGGGGGCCGGTCTGCGCTTTCTCGACGAGGATTGA,MSNQRHQVRTPMKCRIKISHPSFGELVAQTRDLSDSGVYVKHPDMTSLTVGAEVTGQVQDLPFPAPVLKMEVVRVDSEGAGLRFLDED,PFAM: type IV pilus assembly PilZ ;,,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,PF07238 ,PilZ, PilZ domain. This domain is found in a wide variety of bacterial signalling proteins.. ,,,
NC_009439,Chromosome,Pmen_0018,YP_001185525,146305060,Protein,19365,19931,,,NLP/P60 protein,,,ATGCAATGCCTTGATTCGGAAGGGCTTCCGCGCAAAGGCCAATCACCAGGGTCACTGGGTTTGAATAAGTTCTTCATGTCACTTTGCCTGGCAGGCGCTCTTTTACTGGGAATCTGTACCCAAGCCTCCGCCACCTTTCGCATTCACACCATTCCTGCCACTGCGCCAGCGGCCGAACCCAAGCCAGCCAGCGAAGTGATCGACCGCGCCCTCGCTGCACTGGGTACGCCTTACCGCTGGGGCGGTAGCAGCCTGCGCCACGGCTTCGATTGCAGCGGCCTGGTGCAATACGCCTTCAAGACCCAGGAAGACCTCGAACTGCCGCGTACCTCCCGCGCGTTGTCGCGCCTGGACGCGCCGTCGGTGAAAAGCAGCGACCTGCAGCCCGGCGATTTGCTGTTCTTCCGCATCCGCAGCCGTTCGGTGGACCACGTGGCCATCTACATCGGCGAGGGTCGTTTCGTCCATGCGCCGCGTCGCGGCACCAAGGTGCGTATCGACCGCCTCAACGATGCCTACTGGCAACGTCATTTCCAACTGGCCAAGCGGGTGGTGTCGCAAGCCTGA,MQCLDSEGLPRKGQSPGSLGLNKFFMSLCLAGALLLGICTQASATFRIHTIPATAPAAEPKPASEVIDRALAALGTPYRWGGSSLRHGFDCSGLVQYAFKTQEDLELPRTSRALSRLDAPSVKSSDLQPGDLLFFRIRSRSVDHVAIYIGEGRFVHAPRRGTKVRIDRLNDAYWQRHFQLAKRVVSQA,PFAM: NLP/P60 protein ;,,,,,,,,Cytoplasmic,Class 3,,TIGR02219 ,phage_NlpC_fam ,putative phage cell wall peptidase, NlpC/P60 family ,hypoth_equivalog ,6.4e-05 , ,Mobile and extrachromosomal element functions ,Prophage functions ,PF00877 ,NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.. ,COG0791 ,Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane]. ,Cell envelope biogenesis, outer membrane 
NC_009439,Chromosome,Pmen_0019,YP_001185526,146305061,Protein,20108,20545,,,Tir chaperone family protein,,,ATGCCCAGTGCTGCCTATTGCCGGTTGGTCGATGACCTTTGCCAGCTGGCTTTGTTGCCGAACCCGAAAGCGCTCTATGAACGAACCGCCCTGACGGTGGGCAAGGTCAACTTCAGCCTCGTCGAGCGCTCAGGCGATCCGTACAGCGAGGTGTTGATCTATACCGACCTGGGACCGTTGCCCAGCCAGCGTCGAGATGCCGTGCTGCTGCGCTTGCTGGATATCAACTTTCACCTGTTCGTCGGTGCTGGCAGTCCCAGCTGTTCCTACAACAGCGAGACCCAGCGCCTGATGCTGGGTGTCAGCCTCCTGCTGCAGGCTGCCACTGGCCAACGCTTGCTGGCACTGCTCGGGCAACTGGCCGACATGGCTCATAACTGGCGTGACGATCATTTCCTGGAGCGCCCGAGCCCACGTCATGCGCAGGTGAGGTTGTGA,MPSAAYCRLVDDLCQLALLPNPKALYERTALTVGKVNFSLVERSGDPYSEVLIYTDLGPLPSQRRDAVLLRLLDINFHLFVGAGSPSCSYNSETQRLMLGVSLLLQAATGQRLLALLGQLADMAHNWRDDHFLERPSPRHAQVRL,PFAM: Tir chaperone family protein ;,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_009439,Chromosome,Pmen_0020,YP_001185527,146305062,Protein,20545,22776,,,hypothetical protein,,,ATGGACAGAATCCACCAGCCCAGTTCAGCCTCAGCACATGGGGTTGGCCACAGCCCAAGCCCATCTGTCACTGGCGCGCGCCCTGCTTCACCGGTATCGCAACCCAGCGTCACGGTGGCCAGCGAGGCACCCTTGCAGGGGCGTCAGGCCGAGCGCGCGGCCAGGCCGCAGAGTGCGCTCGAACGCTACGAATCCACCTTCCCGACGCTACGCGAGTTACGCCAGAAGGCCCAGCGTGAGGCGGCCCGGCAGGCGGACACGGACAGACCGGCCTATCACCCCCTGGAGGCTGCCAAGCGGCGCATGCTGATCGAAGGTGAATTGCTGCGGGCGCACCCTTCGCTGAGCCTGCAGCAGGCGTCGGAGATTCTCAATATGGGGCATGTCGAGCAGCTGGCCTCGCCGATTCCCTATGGCGACAGCCTGGAGAAATTGGCGACCGCGCTTGACCAGTTGTTCGCCCCGGGCCTGCAGGATGAGTTGCCGTCCCTGGTGCAATTGGGCGCGATACTGGACCAGGGCCTTGGTGAGATATCGCGTCACCTGGAAGGGCAGTTGGATCTGTATCGGCAGGTACTGCAGCACACCTTGCTGGATGACACCGAGCGAGCTCAGGTGAAAGCCGGGCAGCAGGCCTTGCAGGCGATGGCAGAGCGCTGGACGGAGGATATCAAGGGCAAGGTGCTGGGCAAGGCACAGGCGCTGGCCGAAAGCCGCCTGCAAGACCAGCAAAGGGCCCAACAGCAAAGCCCGGATCAGATGGAAGTCCAGACCCGGCAGTGGCAAAACATCCGTGACTACCTCAAGAGCGCGCAGGACGCGTTCGATACGCAAGGTGAGTTCGGCACGGCCTTGCAGCATGTCCGGCTCGACAGCCAGGTAGAGGCAATGAATGCCAGTAACCAGGGCCTGTTTTCCGCGATGCGTTCGTTCATGGCCAATGGTGTTCCGCCGGGTATCGCCTCGACATTGCTTTATGTGATGGCGCGCGCCTATGTCTCACCGCAGTTGGCCGGGGCAGAATTCGTCGCTCGTGCGCTGGGCAGTGGCATGGCCATCGGTGCGGTGCATGAGACCCTGGACAACTTCGCCAAACCGGCGGCGCGTGAAGTTTTGGCCTCGCTGGGTATGACGGAGTTGCGCGAGGTCGACCCGAGCGAAGTCATCCCGGACCCACCGCGAGCGGTGATCGTCGAGGGGCGTTACCAGGAACGCGACGCCGGACAAATGGCTGAAGCCCAGGCCGAGGTCGAGCAGGCGCGCAAGGCGTTCTTGAATGCACAGCAGGACTACAAGACCGGGACGCTCAAGGGCGATGCGATCACGCTGACCAGCCTGCCCGGTGCGCAGGCGGCTCGCGAGCTCGTCAATCTGCTGTCTTCACAAAATGCCGCATCAACCGGGGCGATGGCACTGGCTGCGTTTCTGGGCAATGCCGGCATGTATGGCCTGCAGGCGATGGGACAACGGCAGAAGACGTTCAGCCATGAGGGGCATGATCTGCCGACCCACGTACCCAAGCCGGCGCCACAGGAGGCTCTGGGCCGGCGCCTGGGCAATGTGCTCAAGGATGGGCTGTCGACGATCAATCCGCTGGATGCCTCGGTCAGGCAGAAGTACGACAGCAAGGGGTGGAGCGCTGCACTGGGCATGATGGGCTACAACAGCGTCGAAGGTTCCATCAGGCAGCTGGACACCAGTACAACCGGCGGCATGGCCTCGTCCGTGATACTCACGGGGCTGCAGACCTTTCTCATGCAACAGGTGTTCTATGCCAACAAGCCTGCCGGCGACGAGGCCGAGGCGGGCGGCACCGGCCGTTTCGACAACGCGCTGAACAATATCCGTGACCCCGATCGGGAAACCTTGCCCCATGGCTCGCGTCCGGGCACGACAGAGCGCCGGATCGAAAACACCTACGACCGTCTGCGTGGAGTGATTCAAGGGCCACCGCAGGCCGCGACCGAGATCACCGAGGCCGTGACCAGCACGGTCGTGAGCGGTCTTGGGCAACTGGGGCGCCAGGTGGCCGAGCAGGCTTCACGGCAGCAGCAACGGCTTGCGTCCGAGGTCAGCACCAGGGTGTTCAATACGCTTGCAGGCGGGCTCGAGCACGTGGGGCGTCAGGTGGCGGAGCAGGCCATGAGACAGCGCGACCGGTTCAGGGCGGCGGAGCCGCCAGGCGATATCGAAATGGGTTTGCAGGCACCTCGGGATCGAGACAACGTCTGA,MDRIHQPSSASAHGVGHSPSPSVTGARPASPVSQPSVTVASEAPLQGRQAERAARPQSALERYESTFPTLRELRQKAQREAARQADTDRPAYHPLEAAKRRMLIEGELLRAHPSLSLQQASEILNMGHVEQLASPIPYGDSLEKLATALDQLFAPGLQDELPSLVQLGAILDQGLGEISRHLEGQLDLYRQVLQHTLLDDTERAQVKAGQQALQAMAERWTEDIKGKVLGKAQALAESRLQDQQRAQQQSPDQMEVQTRQWQNIRDYLKSAQDAFDTQGEFGTALQHVRLDSQVEAMNASNQGLFSAMRSFMANGVPPGIASTLLYVMARAYVSPQLAGAEFVARALGSGMAIGAVHETLDNFAKPAAREVLASLGMTELREVDPSEVIPDPPRAVIVEGRYQERDAGQMAEAQAEVEQARKAFLNAQQDYKTGTLKGDAITLTSLPGAQAARELVNLLSSQNAASTGAMALAAFLGNAGMYGLQAMGQRQKTFSHEGHDLPTHVPKPAPQEALGRRLGNVLKDGLSTINPLDASVRQKYDSKGWSAALGMMGYNSVEGSIRQLDTSTTGGMASSVILTGLQTFLMQQVFYANKPAGDEAEAGGTGRFDNALNNIRDPDRETLPHGSRPGTTERRIENTYDRLRGVIQGPPQAATEITEAVTSTVVSGLGQLGRQVAEQASRQQQRLASEVSTRVFNTLAGGLEHVGRQVAEQAMRQRDRFRAAEPPGDIEMGLQAPRDRDNV,,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_009439,Chromosome,Pmen_0021,YP_001185528,146305063,Protein,23322,22972,,,hypothetical protein,,,ATGAAACAGGTATCGCAGAAACTGGCGTTCTATGAGCATGTGGCTGCCGAAAGGAGCGCCGTCTGGCCGGTGGCCTCGGGCGTGACCTTTGTGAGCCGGCGAGAGCATCAGGACTGGGGCATCGCTTTACACGTGGAGAGCCTCGCCATGAGCCCCGAGCAATTGCGTAATGCCCTGGAGCGCCGCTTCGTCGAATCCGACCGTTACAGCGACTACTTCCTCTTCCTCAACGTGCAGCAGGACTTCGTGGTTTGGCACGCCAGTCCGGACGTTGAGGGTGTGGGTGACTCCCTGGACGACATCTGCCGAGAACAGCTGCAGTTGGCAGGGCTCGGCCATCTGCAGTCCTGA,MKQVSQKLAFYEHVAAERSAVWPVASGVTFVSRREHQDWGIALHVESLAMSPEQLRNALERRFVESDRYSDYFLFLNVQQDFVVWHASPDVEGVGDSLDDICREQLQLAGLGHLQS,,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_009439,Chromosome,Pmen_0022,YP_001185529,146305064,Protein,23528,23325,,,hypothetical protein,,,ATGACCATTCGTAGTTTGACTGTCCTTCTGGCCCTGAGCTTGTTGGCGGGCTGTGCCAGCAAGATCGGCTGCTCCGGGTACGCCTGCGAACGCCCCGACTCCACGAACCGGGCCCTGGTGATCTGGTGGCCGGAAGACATGCGCCAGGGCCTCAATGATCGCGACCCCGCGCGGGATTACACCGTCGTTCCTCTTAAGGACTGA,MTIRSLTVLLALSLLAGCASKIGCSGYACERPDSTNRALVIWWPEDMRQGLNDRDPARDYTVVPLKD,,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_009439,Chromosome,Pmen_0023,YP_001185530,146305065,Protein,25618,23528,,,type III secretion outer membrane pore, YscC/HrcC family,,,ATGCGCAATACCCTGATATCGCTGTCGTGGTTGTTATGGCTCGTGTCCATACCGGCGCACGCCGTGCCACCCGAGAGCTGGAAACAGACCGCCTATGCCTACGATGCCCGGCAAACCGACCTGAACTCGGCGTTGGCGGACTTCGCCCGGGAGTTCGGTCTATCGCTGGACATGCCGCCCATGGATGGCATCGTCGACGGTCGTATCCGCGCCAGCAACCCGCAGGAATTTCTCGAACGACTCGGGCGTGAATACCAGTTCCAATGGTTCGTTTACAACGAAACGCTCTACATCAGCCCCACCCGCGAACAGACGTCGGCCCGCATCGAGGTCTCGCCGGATGCCGTCGATGACCTGGAAAACGCACTGACCGCCATCGGCCTGCTCGACCCGCGTTTCGGCTGGGGCACGCTACCCGAAGAAGGCCTGGTGCTGGTTCGCGGCCCGGCCCAGTACGTACAGTTCATTCGCGAATACAGCCAGAAGGTCGAAGAACCGGAGAAAGCGGAAAAACAGGACGTCATCGTCTTCACCCTGAAGTATGCCAACGCGGCTGATCGCTCCATTCGTTATCGTGATCAGGAGCTGCGTGTAGCAGGTGTGGCCAGCATCCTTCGCGAACTGCTGGAAACCCGGTCACGGGGTGAACCCATCAGCGGCGTGGGCATTTTCCAACCATCCGGTACGACCCAAGGCCTGGCGCCAACCCGCCCGATGGGGTTGCCTTACGCTGGGATGAGCGGCCTGGATGGCGGCCTCCTCGAGCAGGGACTCGACAATGTACTGGGGCTGGCTCAGTCCTCTTCGCGCAAGCGCAGTGAAAGCCGCAGCCGCTCGCAGATCCGCGTCAGCGCCGACGTGCGCAACAACGCCGTCCTGATCTATGACCTGCCAGAGCGCAAGGCCATCTATCAGGGCCTCATCCAGCAACTGGACGTGCCGCGCAACCTGATCGAGATCGATGCCGTGATTCTCGATATCGACCGTAACGAGCTGGCCGAACTGTCCAGCCGCTGGGCCTTCAACTCCGGCAGCGTCAGCGGCGGCGCCAACCTGTTCGAACCCGGTACCACGTCGACGCTGTTCATCCAGGATGCCGGTCGGTTCGCCGCGGAATTGCGTGCACTGGAGGGAACCGGGGCCGCCTCGATCATGGGCAACCCCTCGATCCTGACCCTGGAAAACCAGCCCGCGGTCATCGACTTCAGCCGCACCGAGTACCTGACGGCGCTGGCCGAGCGCGTTGCCAATATCCAACCCATCACCGCCGGCACCAGCCTGCAGGTGATCCCGAGGTCACTGAATCAGGGCAGCCGCTCCCAGGTCCAGCTGATCGTCGACATCGAAGACGGACAGATCATCGAGTCGAACATCTCCGAGGAGCAGCCGTCGGTACGCCGTGGCAATGTCAGCACCCAGGCAGTGATCGCCGAGCATGGCTCGCTGGTGATCGGCGGTTTCCACAGTCTCGAAGCCAACGACAGGATCAACAAGATTCCCTTGCTCGGCGATATCCCGGTCATCGGTAAATTGCTGTTCCAGTCACGCAATCGCGAATTCAACCGGCGTGAGCGCTTGTTCATCCTCACCCCTCGTCTGATCGGAGATCAGGTGAACCCTGCGCGCTACGTGCAACATGGCAATCCGCATAACCTGGACCGGCAACTTCGCGAGATCGACGAGCGCCGCCGGGGTACCGAACGCCCGAGTCGGGGCGACATCGAACATGCCTTCACCCAGCTGCTCGATGGCATACACCCCTCCGGGTTCGACAGCGCACCCTTGCCGCTCAGGGCAGAAACGCTCTGCAACTCGGATCACGGACTGACGCTGGATGCCGAACGCTCCCAGTGGTTCGCCCGCGATGGTTGGGGTGTAGCAGTGGTCGTGGCACGTAACGACACGGCACAACCGATACGCATCGATGAGAGCCGCTGTGGGGGACGCTGGGCCATGGGGGTCAGTGCCTGGCCACGCGCCTGGCTCCAGCCTGGCGAGGAGAGCGAAGTGTTCATTGCCCTGCGCCAGCCGCAATCGCTGCAAAAAACCGGACAAGGCCGAACTTCATTGCTGCACAGGAGCACCCCTTGA,MRNTLISLSWLLWLVSIPAHAVPPESWKQTAYAYDARQTDLNSALADFAREFGLSLDMPPMDGIVDGRIRASNPQEFLERLGREYQFQWFVYNETLYISPTREQTSARIEVSPDAVDDLENALTAIGLLDPRFGWGTLPEEGLVLVRGPAQYVQFIREYSQKVEEPEKAEKQDVIVFTLKYANAADRSIRYRDQELRVAGVASILRELLETRSRGEPISGVGIFQPSGTTQGLAPTRPMGLPYAGMSGLDGGLLEQGLDNVLGLAQSSSRKRSESRSRSQIRVSADVRNNAVLIYDLPERKAIYQGLIQQLDVPRNLIEIDAVILDIDRNELAELSSRWAFNSGSVSGGANLFEPGTTSTLFIQDAGRFAAELRALEGTGAASIMGNPSILTLENQPAVIDFSRTEYLTALAERVANIQPITAGTSLQVIPRSLNQGSRSQVQLIVDIEDGQIIESNISEEQPSVRRGNVSTQAVIAEHGSLVIGGFHSLEANDRINKIPLLGDIPVIGKLLFQSRNREFNRRERLFILTPRLIGDQVNPARYVQHGNPHNLDRQLREIDERRRGTERPSRGDIEHAFTQLLDGIHPSGFDSAPLPLRAETLCNSDHGLTLDAERSQWFARDGWGVAVVVARNDTAQPIRIDESRCGGRWAMGVSAWPRAWLQPGEESEVFIALRQPQSLQKTGQGRTSLLHRSTP,TIGRFAM: type III secretion outer membrane pore, YscC/HrcC familyPFAM: type II and III secretion system protein ;,,,,,,,,Outer Membrane,Class 3,,,,,,,,,,PF00263 ,Secretin, Bacterial type II and III secretion system protein.. ,COG1450 ,PulD, Type II secretory pathway, component PulD [Cell motility and secretion / Intracellular trafficking and secretion]. ,Cell motility and secretion / Intracellular trafficking and secretion 
NC_009439,Chromosome,Pmen_0024,YP_001185531,146305066,Protein,26045,25620,,,hypothetical protein,,,ATGGAATTCAGTGAATTCTCCGACGTCATCGCCCAATGGTGCGAGGCGTCCGCACTGCCACTCGACTGCTGGATCGACGATGCCAACGCGCGCCTTGCCGAGATGGGCGGCGGCGTCAGATGCAGCCTGGAAGTGCTCAATCCCTTCGAAGCCAGCGACCAACAACGATTGCAGGCGGTGCTGAGCCAGGGCGGTGCCGGCCTGGCCTGTGCCTGCGATGGTGCATTCGCCATCGACCCCGACACCCACGCACTCGTCCTGGTGAACTGGCATCGCGCACCCTGCTCCGTGGATCAGCTGCTGGCCAGCCTGGAAAGGCTGGCCAACCAGCGGGCTGCCCTGATCAGCCTGCTCCACGTATCCATACGCGAGGCGGCGCTCATCGCACCGCAACCGTCCTTCAACGCACTGCATCCGGGAGTGTGA,MEFSEFSDVIAQWCEASALPLDCWIDDANARLAEMGGGVRCSLEVLNPFEASDQQRLQAVLSQGGAGLACACDGAFAIDPDTHALVLVNWHRAPCSVDQLLASLERLANQRAALISLLHVSIREAALIAPQPSFNALHPGV,,,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,,,,,
NC_009439,Chromosome,Pmen_0025,YP_001185532,146305067,Protein,26256,26032,,,hypothetical protein,,,ATGTCAAGCCTAGAAGCCCTGCGTAACCGTCTGGACCGCGCCCAGGAAAGCGCCGTGCGAAACAAGGACGATGCCTTGCTGCAGGCAGCCGAAAGCGCCGATATCAATGACATGCACGCCTACAACGAGGCGGCGCGCAAAGCCCAGCTCGTCAGCACCGTGGTCAGTGAGGAACTGCGCGCTCAACACGGCCTGACCAAAGCGATCATCGATGGAATTCAGTGA,MSSLEALRNRLDRAQESAVRNKDDALLQAAESADINDMHAYNEAARKAQLVSTVVSEELRAQHGLTKAIIDGIQ,,,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,PF06266 ,HrpF, HrpF protein. The species Pseudomonas syringae encompasses plant pathogens with differing host specificities and corresponding pathovar designations. P. syringae requires the Hrp (type III protein secretion) system, encoded by a 25-kb cluster of hrp and hrc genes, in order to elicit the hypersensitive response (HR) in nonhosts or to be pathogenic in hosts. The exact function of HrpF is unknown but the protein is needed for pathogenicity.. ,,,
NC_009439,Chromosome,Pmen_0026,YP_001185533,146305068,Protein,27004,26417,,,type III secretion apparatus protein, HrpE/YscL family,,,GTGCTGACTAAACGCCGCTTCACCCTTGGCTCAGCGGTACTCGAAGAACCGATTCTGCGCCGACAGCTGCTTGCAGAAAGCCTGCGCGCGGACGAGCTTCTGGCCCAAGCACGCCTGCAGGCCGAACAATTGCTGCAGCAGGCCCACGAGCAGCGCCAGCACTACCTCGATGAAGCCGTCGCCCGCTTCTGGAGCGAAGCCAACGCACTGCTTCAGGCGATACAGGAGGAACGCGCAAGTTATCAGCGCGATGCCTTGTCCGCTGTCGACTCGCTATTGAACATCGCCCTGTCGCGTTTGCTGGATGAAACGGATCTGCCGCAGCGGATCAGCGCATTGCTGCGCAACCTGGTCGTTGGCCTGCCAAGCAAGGCGGAGGCGAACCTGGCCTGTCACCCCGAAGCCGCCAGCACGGTTCGCGCCTGGCTGCAGACGATGGGCTTCGACGCGCTCTGGCAGGTGCAGGAAGACCCAGGCATGGCACCTGAATCGCTACGCCTGAGCAACACGCTGGGTACCTTTCACATCGACTGGCCGTCGTTGCGGCGCGGGCTGATACCGAGCCTGCCCGAAGCCCGGCATGCCTAA,MLTKRRFTLGSAVLEEPILRRQLLAESLRADELLAQARLQAEQLLQQAHEQRQHYLDEAVARFWSEANALLQAIQEERASYQRDALSAVDSLLNIALSRLLDETDLPQRISALLRNLVVGLPSKAEANLACHPEAASTVRAWLQTMGFDALWQVQEDPGMAPESLRLSNTLGTFHIDWPSLRRGLIPSLPEARHA,TIGRFAM: type III secretion apparatus protein, HrpE/YscL familyPFAM: HrpE family protein ;,,,,,,,,Cytoplasmic,Class 3,,TIGR02499 ,HrpE_YscL_not ,type III secretion apparatus protein, HrpE/YscL family ,equivalog ,3.8e-31 , ,Protein fate ,Protein and peptide secretion and trafficking ,PF06188 ,HrpE, HrpE protein. This family consists of several bacterial HrpE proteins. The exact function of this family is unknown but it is thought that HrpE is involved in the secretion of HrpZ (harpinPss).. ,,,
NC_009439,Chromosome,Pmen_0027,YP_001185534,146305069,Protein,27527,26994,,,hypothetical protein,,,ATGAGTGATGCTGCCGAGCGCTGGGTGCGCTGGTGGTGCGAGGCCTGGCACTTCGCGCATCCGGGCTGGCGGCGATCATCTCCGGTGCTGGCAGCCGCGGCAGATTGCTCCCATAGCCGTCATGCCGCGCTCGCCCAGTCTCTGGGAATCGGCGCTACGCAACCCCCGCCACCGCATGAGGGTGTCCTGCAATGGCTGGCATTGAACGAGCGCCAGCGCCAGCACGCGCTAGCCCTGGCGCAGCACATCTGTTCGGCGAAAGCCCCCTGCCAGGCCCTGCCTGCCGATGCCGACTGGTGTCGCAGCTTGGGCAAGGCATTGCGTCCCGGCTTGTGGCTGACCGCCGAAGCCACAGATCCCAGGCTGTTGCTCGGCGCCTGGGCCGGACCTGCATGCTGGGAACGCCTGCGCCTGCAGTGGGCGCCCGGTTCGCTGGAAGAACTCCCCCCGGATCTGCCAGCCAGACGCCTGGCCACCCTGTGGGCGGCGGTGCTGTGGCGAACCTCGCAGATGGAGCGCACTCGTGCTGACTAA,MSDAAERWVRWWCEAWHFAHPGWRRSSPVLAAAADCSHSRHAALAQSLGIGATQPPPPHEGVLQWLALNERQRQHALALAQHICSAKAPCQALPADADWCRSLGKALRPGLWLTAEATDPRLLLGAWAGPACWERLRLQWAPGSLEELPPDLPARRLATLWAAVLWRTSQMERTRAD,,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_009439,Chromosome,Pmen_0028,YP_001185535,146305070,Protein,28342,27524,,,type III secretion apparatus lipoprotein, YscJ/HrcJ family,,,GTGAAATGGACGCTCTCCATTGTCGCCCTGTGCCTGCTTCTGTTGAGCGGGTGCAGTGATCGCACCGACCTGTTCAGCGGTCTTTCCGAACTCGATGCCAATGAGGTCATTGCCTCCCTCGGTGAACACCGCATCAGCGCGCGCAAACGCGCGGAGAAGGCGGGTGTGGTGGTGACCGTCGACACCGCAGAGATCAATCGAGCGGTGCGTGTACTGGAAGCAGCCGGGTTACCACGCCGGGCTCGGACCAGCCTGGGTGAAATATTCAAGAAGGAAGGCGTGATCTCCACGCCGCTGGAAGAACGCGCCCGGTACATCTATGCGCTGTCGCAAGAACTGGAATCGACGCTCTCGCAAATCGATGGCGTCATCGTCGCCCGTGTTCACGTCGTGCTGCCCGAGCGCATTGCGCCAGGCGAACCGGTACAGCCGGCATCGGCTGCGGTCTTCATCAAGCATGCCGCCAGCCTGGAGCCCGATGCCGTGCAACGACGGATTCAGCAGATGGTGGTCAGTAGCATCCCCGGCCTGGCCAGTACGGGGGTCGAGAGCAGCGAGAAGTTCTCCATCGTCTTCGTCCCGGCCGCCGAGCTTCAGGATGCAGATACTTTGGTGCCGTTCGGGCCCTTTCTGATCGAAAGCCAGAAACTGGGATTCTGGCAGCTCATGTCCTGGCTCATCCCCCTGGGAGGCCTGCTGCTATTGGCGGTCCTGACACTGCTGGTACGCCAGGACTGGCGCTCGGTATTGCTCCGTCGAGTACGGCCACGACAGCCGGCCAGCCATAACGTCTCGACACTGCCGAGCCGCGTCGCATGA,MKWTLSIVALCLLLLSGCSDRTDLFSGLSELDANEVIASLGEHRISARKRAEKAGVVVTVDTAEINRAVRVLEAAGLPRRARTSLGEIFKKEGVISTPLEERARYIYALSQELESTLSQIDGVIVARVHVVLPERIAPGEPVQPASAAVFIKHAASLEPDAVQRRIQQMVVSSIPGLASTGVESSEKFSIVFVPAAELQDADTLVPFGPFLIESQKLGFWQLMSWLIPLGGLLLLAVLTLLVRQDWRSVLLRRVRPRQPASHNVSTLPSRVA,TIGRFAM: type III secretion apparatus lipoprotein, YscJ/HrcJ familyPFAM: secretory protein YscJ/FliF family protein ;,,,,,,,,Cytoplasmic Membrane,Class 3,,,,,,,,,,PF01514 ,YscJ_FliF, Secretory protein of YscJ/FliF family. This family includes proteins that are related to the YscJ lipoprotein, and the amino terminus of FliF, the flageller M-ring protein. The members of the YscJ family are thought to be involved in secretion of several proteins. The FliF protein ring is thought to be part of the export apparatus for flageller proteins, based on the similarity to YscJ proteins.. ,COG4669 ,EscJ, Type III secretory pathway, lipoprotein EscJ [Intracellular trafficking and secretion]. ,Intracellular trafficking and secretion 
NC_009439,Chromosome,Pmen_0029,YP_001185536,146305071,Protein,28721,28353,,,type III secretion apparatus protein, YscI/HrpB family,,,ATGAGCATTTCCAAGATAGACGGACTGACGAGTCCCGACTTGAAGCTCGACCAGGGACTGGTCAGTGAGCCTTCTCAGGCAGATGTCGATCTCTTTTCCAGCTTGATGCGAGACAACGGCAACACGGCTGACCAGCCCAGCCACCTGGCGGCCGTTATCGCCGAGACGGTGAATGCACGGATGACGTCTGTGGATGACCTCTCGCGGCAAGCCATGCGCCACATGAAGGAGGCCGTGACCGGCAACGATGTAAGCGCCATCACGGATATGAGCCGTGCCCTCTCGCAGTACTCGCTGCAAATGGCGGTAACGACCAAGGTGGTCAGCAAGACAGGGCAGGCACTCGAAAAACTGACCAACATGCAGTAG,MSISKIDGLTSPDLKLDQGLVSEPSQADVDLFSSLMRDNGNTADQPSHLAAVIAETVNARMTSVDDLSRQAMRHMKEAVTGNDVSAITDMSRALSQYSLQMAVTTKVVSKTGQALEKLTNMQ,TIGRFAM: type III secretion apparatus protein, YscI/HrpB family ;,,,,,,,,Unknown,Class 3,GO:0030257 ;,TIGR02497 ,yscI_hrpB_dom ,type III secretion apparatus protein, YscI/HrpB, C-terminal domain ,equivalog_domain ,2e-10 , ,Protein fate ,Protein and peptide secretion and trafficking ,,,,,
NC_009439,Chromosome,Pmen_0030,YP_001185537,146305072,Protein,29664,28765,,,HrpZ family protein,,,GTGAATATGATTAGCAATATGCCGGGGTTGGTGGCCGGCAATTTCAGCAACTTCTCTATTGGCTCGCAAAGCAATAGCGAACGACCGCAGAACATGGACCAGGTGGTGGACAAACTGGCCGACATGTTGAAAGGCAGCGACCTGTCATCCTCCCCGCTGGGACAGATGGTCAAGGACAAGCTCGACGATTCGGGCGGCCTGATGGGCATCCTGAAAAAGGGCGGAATGGAGAACGCAGTCAAGGACGCCCTCAAAGACATCATCAGCGAAAAGCTCGGCGACAACTTCGGTGCCGCCCAGTCGTTCGGCCTGGGTAACGGCTCTGGCACTGGCGGTGCCGGTGGCGCTGGCGGCGGTCAGCAACCCGACCTACTGGAGCGCGTACTCAGCGGGCTGGCCAAGTCGTCCCTGGACGATCTGCTCGGCAAACAGGGTGAGGGTACGAAGTTCTCCAACAAGGACATGCCGATGTTGGAGGAAATCGCCAAGTTCATGGATGACCCGAGAAGCGGGATCAAGCCGCCCGACTCCGGCTCCTGGGCGAATGAGCTCAAGGAAGACAACTACCTGAACAAGGAAGAGACCGCCGCATTCCGAGCCGCCCTCGACCAGGTTGGCGGGGCGCTGGACCAGAAGGCATCCGGTCAGCCGTCTGGCATGCCAGGCGGGCTGGGCATGCCGGGTAACGCCGGGCAGAACATGCTCGGCGGCGAAGGCGGCCTCGGCGGCTCGGGCACGGGTAGCGCGGCGGGCAATCCTCTGCAGCAGCTGAACGACCTGATCCAGGGCCTGCAGGGTCTGGCCTCCCAACTCAGCCTGCAAAACCTCGCCAGTAGTGCAATGGATACGGCCAATGCCCTGGTCGGTGCGATGTTGCCCAACAACAGCCGCACAGCCTGA,MNMISNMPGLVAGNFSNFSIGSQSNSERPQNMDQVVDKLADMLKGSDLSSSPLGQMVKDKLDDSGGLMGILKKGGMENAVKDALKDIISEKLGDNFGAAQSFGLGNGSGTGGAGGAGGGQQPDLLERVLSGLAKSSLDDLLGKQGEGTKFSNKDMPMLEEIAKFMDDPRSGIKPPDSGSWANELKEDNYLNKEETAAFRAALDQVGGALDQKASGQPSGMPGGLGMPGNAGQNMLGGEGGLGGSGTGSAAGNPLQQLNDLIQGLQGLASQLSLQNLASSAMDTANALVGAMLPNNSRTA,PFAM: HrpZ family protein ;,,,,,,,,Unknown,Class 3,,,,,,,,,,PF04877 ,HrpZ, HrpZ. HrpZ from the plant pathogen Pseudomonas syringae binds to lipid bilayers and forms a cation-conducting pore in vivo. This pore-forming activity may allow nutrient release or delivery of virulence factors during bacterial colonisation of host plants.. ,,,
NC_009439,Chromosome,Pmen_0031,YP_001185538,146305073,Protein,30009,29716,,,hypothetical protein,,,ATGGCGATGGACCCAATCAACGGCGGCATGCAGCTGTTCAACCAAGCGACCAGTTCCCTCAACATGAACAACAACATCGCTGACGCGGCAGGCGACAGCAAGTCCTCCAAGGCCATGGAAGATGCCATGGCGCGCTCCGACGCCAGCAGCGCGAGGATGATCGACCTGCAAAGCCGTCACGCCGAGAAGATGAAAGTCGAAAACACCCTGCAGGCCATGCAGTCCGCCGAGGACGATGCTGCCAACAAGAAAATCAGCTCCACCGCACAGAACGCCAAGGGCATCAGCTACTAA,MAMDPINGGMQLFNQATSSLNMNNNIADAAGDSKSSKAMEDAMARSDASSARMIDLQSRHAEKMKVENTLQAMQSAEDDAANKKISSTAQNAKGISY,,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_009439,Chromosome,Pmen_0032,YP_001185539,146305074,Protein,31210,30305,,,sigma54 specific transcriptional regulator, Fis family,,,ATGAGTGAGTTCGATTGGCCGGATGCTTTTTGGATGAATGACGGTGGTTTACCCAATCTCGAAGTCGTGGCAAGCAGCATCTCCGAACTGAATATCGATGTCCTGCTTACCGGCGAAACCGGTTCTGGCAAGGACACACTTGCGCAATACCTGCACAAGCTGTCCGGACGCAAAGGCCCATTCGTGGCAATGAACTGCGCAGCAATTCCGGAATCTCTGTTCGAGAGCGAGCTGTTCGGTGTGACCAGCGGCGCCTACACCGGCGCTGATCACTCCAGAATGGGCTATGTGGAGGCCGCCCAGGGCGGCACGCTGTACCTCGACGAAATCGACAGCATGCCCGCGTTCCTGCAAGCCAAGCTCCTGCGGGTGCTGGAGACCCGCCAGATCGAACGCCTGGGGTCGACCACGCCAGTCCCCTTGGATATCTGCGTCGTGGCCTCCGCGCAACGCTCGTTGGACGCCTTGGTCGAGCAGGGCGAGTTTCGCCGGGATCTCTACTTCCGCCTCAATGTCCTGACGCTGAGGCTGCCCGCGCTGAGACAGAAGCGCGAGTGGATCATCCCGATGTTCGAGCGCTTCGCATTCGAGGCCTCGCAGGACATGGACACGGCGCTACCGGTCATCGACCCTGCCATCGAACATGTACTGCTGAACCATGACTGGCCCGGTAATCTCCGCGAGCTCAAATCTGCGGCGAAGCGCCACGTGCTGGGTATAAACCTTTTGGGTATAGAAGCCGAACAGCCCATCGAGTGCGATCTCAAGTGCCAACTCCGGCTGATCGAAAAGGTGTTGATCCAGGAATCCCTGCAGCGCCACGAACATTGCATCGAGGCCGTGCTCCACGAGTTGGACATTCCCCGGCGCACGCTCTATCACCGCATGAAAGAGCTCGATGTCTGA,MSEFDWPDAFWMNDGGLPNLEVVASSISELNIDVLLTGETGSGKDTLAQYLHKLSGRKGPFVAMNCAAIPESLFESELFGVTSGAYTGADHSRMGYVEAAQGGTLYLDEIDSMPAFLQAKLLRVLETRQIERLGSTTPVPLDICVVASAQRSLDALVEQGEFRRDLYFRLNVLTLRLPALRQKREWIIPMFERFAFEASQDMDTALPVIDPAIEHVLLNHDWPGNLRELKSAAKRHVLGINLLGIEAEQPIECDLKCQLRLIEKVLIQESLQRHEHCIEAVLHELDIPRRTLYHRMKELDV,PFAM: sigma-54 factor, interaction domain-containing protein ;,,,,,,,,Cytoplasmic,Class 3,GO:0006808 ;,TIGR01818 ,ntrC ,nitrogen regulation protein NR(I) ,equivalog ,7.5e-15 , ,Signal transduction ,Two-component systems ,PF00158 PF07728 ,Sigma54_activat, Sigma-54 interaction domain.. AAA_5, ATPase family associated with various cellular activities (AAA). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.. ,COG3829 ,RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]. ,Transcription / Signal transduction mechanisms 
NC_009439,Chromosome,Pmen_0033,YP_001185540,146305075,Protein,32523,31594,,,sigma54 specific transcriptional regulator, Fis family,,,ATGAGTAGGGGGGTCGCCGCAGAAAAAAGTGCGCGCAGACATGGTGGTACGGACGTTCCCGAGTTGGGCATTACGCTATCTGCAGGACATTTCAGAATGGACCTGCTTCTGTGTGGGGAAACTGGAACTGGCAAAGATGTGCTGGCGAGGCACATCCACGATCTGTCCGGCAGGACAGGCGCTTTCGTCGGCATAAACTGCGCCGCCATTCCGGAGGCATTGGCCGAAAGCCAGCTATTCGGTGTTGCCAGCGGTGCTTTCACTGGGGCCAACCGGTCACGCCAGGGTTATATCGAAGCCTCGAACGACGGTACGCTGTACCTCGACGAGATCGACAGCATGCCCCTGCAACTACAGGCGAAGCTGCTGCGCGTGCTTGAGACCCGTGGCGTCGAACGCTTGGGCACGACGAAATTCATCCCTCTCAATCTGCGGATCATCGCCTCGACGCAACGCCCTCTCGAAGAGCTGGTGGAGCAGGGACTGTTTCGCCGCGACCTGCTTTTCCGGCTCAATGCAATGACGCTGTCATTGCCTCCCTTGCGCCAGCGGCGCGAGTTGATCCTGCCGCTGTTCAAGCGATTCACCCGAAGCCTTGGCGCGAAGCAGGCAAATGGCGCACAAGCCCTGGACTCTCAACTGATCCAGCTACTGCTCAGCCACCCCTGGCCGGGCAATATCCGTGAACTGAAGTCCGCCGCCAAACGCTACGTGATAGGACTGCCGCCTATCGATGCCGGCGTCCTTGCTGATCTCGAAGACGGTGATTTTCCCCACGACAGGGGGCTCAAGAAGCGCATGCGCGCTGTGGAGAAAATGCTCATTCAGGACGCCTTGAAGCGTCACAAGAACGGTCTGGAGGCAGTCGCCGAGGAGCTCGGCATATCCCGTCGTACCCTGTATCAGCGAATAAAGGAACTTGACGTCTAG,MSRGVAAEKSARRHGGTDVPELGITLSAGHFRMDLLLCGETGTGKDVLARHIHDLSGRTGAFVGINCAAIPEALAESQLFGVASGAFTGANRSRQGYIEASNDGTLYLDEIDSMPLQLQAKLLRVLETRGVERLGTTKFIPLNLRIIASTQRPLEELVEQGLFRRDLLFRLNAMTLSLPPLRQRRELILPLFKRFTRSLGAKQANGAQALDSQLIQLLLSHPWPGNIRELKSAAKRYVIGLPPIDAGVLADLEDGDFPHDRGLKKRMRAVEKMLIQDALKRHKNGLEAVAEELGISRRTLYQRIKELDV,PFAM: sigma-54 factor, interaction domain-containing protein ;,,,,,,,,Cytoplasmic,Class 3,,TIGR01199 ,HTH_fis ,Helix-turn-helix domain, fis-type ,No data ,5.4e-15 , ,No data ,No data ,PF00158 PF02954 PF07728 ,Sigma54_activat, Sigma-54 interaction domain.. HTH_8, Bacterial regulatory protein, Fis family.. AAA_5, ATPase family associated with various cellular activities (AAA). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.. ,COG3829 ,RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]. ,Transcription / Signal transduction mechanisms 
NC_009439,Chromosome,Pmen_0034,YP_001185541,146305076,Protein,33268,32882,,,hypothetical protein,,,GTGCCGACAACTCACATGCGCCCGGCGGAACATGGACGATCACTTCGAGAAGAGGAGTGGCTGAAGAACGATCAGGCCATCGACCAGGGCCGTTACAGCTCGATCGCCTTGACCGGCAGTTTCGAGCATCAGCACCTCGCTCAATCAGACGGTCAGCTCGCTGCGGCAGCGCAGGAATACCCAAGGCGATGTAAAGGCGTGAGATGCAAAATCGCCGAGCCGTCCCTTACTTCCGCCAAGCCTGCAAAATGCAATCATGGTTTCTGCAAAAAAGCTGGCCGCGTTCTTTTCTGCTTCAACCCAGCAATAGCATTTCGCCACAGACATATACCGCTCGTCGTTTTTTATTTATCCAATCAAACAATAACAGCTCATCTTTTAGGGTAA,MPTTHMRPAEHGRSLREEEWLKNDQAIDQGRYSSIALTGSFEHQHLAQSDGQLAAAAQEYPRRCKGVRCKIAEPSLTSAKPAKCNHGFCKKAGRVLFCFNPAIAFRHRHIPLVVFYLSNQTITAHLLG,,,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,,,,,
NC_009439,Chromosome,Pmen_0035,,,,35920,33299,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
NC_009439,Chromosome,Pmen_0036,YP_001185542,146305077,Protein,35032,33458,,,transposase IS66,,,ATGATCGCCGTGCCCGCCCCCCTTCCTGACGACCCAATCCTGCTCAAGCATTTACTGCTGCTGGCCAGTGAACAGGCGGCTGCGAAAGATGCTCGCATAGAACAACTTCAGGAACAGGTCGCCCTGCTGCGCCACAAGTTGTTCTCGCCCAAGTCCGAGCGCAGCCCTGAAGACGCCGACTCACCGCAGTTGGCCATGTTCAACGAGGTCGAAGAGCTGATCGAAGCGGCCGCTGCGCCAAGCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGAAATCGTTGCGCCGGTCAAGCGCCGTGGCAAGCGCAAGCCGTTGCCGGCCAACCTGCCGCGTGTCGAAGTCATCCACGACCTGCCCGAGCACGAGCTGACTTGCGCCTGTGGCGCCTGCAAACAAGTCATCGGCGAGGAGACCAGCGAACAGCTGGAGATTATCCCGATGCAGGTGCGGGTCATCCGCCATATCCGCAAGACCTACGCCTGCAAGGCCTGCGAAGCGGCGCCGCTCACTGCCGACAAGCCGGCCCAACTGATCGAGAAGAGCCTGGCCAGCCCCAGCGTGTTGGCCATGCTGCTGACCACCAAGTACGCCGACGGCATCCCGCTGTACCGCTTCGAGAAGATGCTCAGCCGCCACGGCGTCGACATACCACGCCAGACCCTGGCGCGCTGGGTGATCCAGAGCGGTGAACAGCTGCAACCGCTGCTCAACCTGCTGCGCGACAAGCTGCTCGAATACCCCGTTTTGCACTGCGACGAAACGCGCCTGCAGGTGCTGCATGAACCGGGACGCGATCCCACCGCGCAGTCCTGGATGTGGGTACAAAGCGGTGGACCACCGGATAAGCCGGTGATCCTCTTCGACTACACCGCCAGCCGCGCGCAGGAGGTGCCGCTGCGCTTGCTCGACGGCTATCGCGGCTACCTGATGACCGACGACTACGCCGGCTACAACGCCGTGGCCGCGCAAGAAGGCATCGAACGCCTCGGCTGCTGGGCGCATGCGCGGCGCAAGTTCGTCGAGGCGCAGAAAGTGCAACCCAAGGGCAAAACCGGCCGTGCCGACATGGCGCTGAACCTGATCAACAAGCTCTACGGCATCGAGCGTGACCTGAAGGACGCCTGCGATACCGAGCGCCTGGTCGCCCGTCAGCAACGCAGCCAGCCGCTGCTCGATCAACTCAAGACCTGGCTGGACAAGACCCAGCCGCAGGTCGTCGGGCAGACGGCGCTGGGCAGGGCGGTGAACTACCTGGCCAGCAACTGGAGAAAGCTGGTGCGCTACGTCGAAGGTGGACATCTGCCGATCGACAACAACCGCGCGGAGAACGCCATCCGCCCGTTCGTTATCGGGCGCAAGAACTGGCTGTTCAGCGACACGCCCAAGGGGGCCACGGCCAGCGCACAGATCTACAGCCTGATCGAAACCGCCAAGGCCAATGGCCAGGAGCCTTACGCCTGGCTGCGCCACATCCTCGAACGCCTGCCGGCCGCCAATAGCGTCGAGGATTACGAAGCGCTGCTGCCGTGGAATTGCTCGCCAGTGAGCGCATCCTGA,MIAVPAPLPDDPILLKHLLLLASEQAAAKDARIEQLQEQVALLRHKLFSPKSERSPEDADSPQLAMFNEVEELIEAAAAPSEAEAEAEAEAEAEAEEIVAPVKRRGKRKPLPANLPRVEVIHDLPEHELTCACGACKQVIGEETSEQLEIIPMQVRVIRHIRKTYACKACEAAPLTADKPAQLIEKSLASPSVLAMLLTTKYADGIPLYRFEKMLSRHGVDIPRQTLARWVIQSGEQLQPLLNLLRDKLLEYPVLHCDETRLQVLHEPGRDPTAQSWMWVQSGGPPDKPVILFDYTASRAQEVPLRLLDGYRGYLMTDDYAGYNAVAAQEGIERLGCWAHARRKFVEAQKVQPKGKTGRADMALNLINKLYGIERDLKDACDTERLVARQQRSQPLLDQLKTWLDKTQPQVVGQTALGRAVNYLASNWRKLVRYVEGGHLPIDNNRAENAIRPFVIGRKNWLFSDTPKGATASAQIYSLIETAKANGQEPYAWLRHILERLPAANSVEDYEALLPWNCSPVSAS,PFAM: transposase IS66 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,PF03050 ,Transposase_25, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.. ,COG3436 ,COG3436, Transposase and inactivated derivatives [DNA replication, recombination, and repair]. ,DNA replication, recombination, and repair 
NC_009439,Chromosome,Pmen_0037,YP_001185543,146305078,Protein,35411,35052,,,IS66 Orf2 family protein,,,ATGATGCGTCCCGACGCCAAGGTGCAGAAGGTCTACCTCTACCCAAAACCCGTCGATTTCCGCAAATCCATCAACGGCCTGGCCGCTCTGGTCGAGCTGGACATCAAGGTGGAAGTGTTCAACCCCGTGCTGTTCGTGTTCCTCAACCGCACCCGCAGTCAGGTCAAGATCCTCTACTGGGAGCGCAATGGCTTCTGCCTGTGGCTCAAGCGTTTGGAAGCCGAACGCTTCAAGACCAAGCCCGATGCCGGCGACGAGGCCATCGAGCTGACGGTCGATGAGTTGAACTGGCTGCTCGACGGCATCGACCTGTGGCGCAACCGTCCGCACCAGATACTGACGCCGCGTTTCGTGACCTGA,MMRPDAKVQKVYLYPKPVDFRKSINGLAALVELDIKVEVFNPVLFVFLNRTRSQVKILYWERNGFCLWLKRLEAERFKTKPDAGDEAIELTVDELNWLLDGIDLWRNRPHQILTPRFVT,PFAM: IS66 Orf2 family protein ;,,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,PF05717 ,Transposase_34, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.. ,,,
NC_009439,Chromosome,Pmen_0038,YP_001185544,146305079,Protein,36171,37328,,,type III secretion effector delivery regulator, TyeA family,,,ATGATCAGACCTATCCCCAACGCCAGCTCGATCCTGCACATACCGTCTGTCGCCCGTGCAGCATCCCCTGCCACTCCCCTTGCGCAGGTTCGGTCAGGTGCTGCGACCACCACTGGCACGAGTGCCCAGCAAGCCTCGAAATTCGCCGCCGCGCTGGTACAGAACAGCCGCGAGTTGGGGCGTCGTGATCTGTTCGCCAAGATCAATGCTCTGCAATCCCAGGCAAGCAAGCAGCATGAGTTGGCCCACCTGCTGCTGGCGACCCATGAACGGGGCATGGAGGAGTCGGCTCGTGCACTGCGCAAGACGCTGAAGAACGGCCAACTGCTGCGAATGGAGCGGGGCAAGCTGCTCAAGCAGATCGTCGACAGCATGGCGGGCGATGCAGCCAAGGCCCATGCCCTGTTGCAGGCGGCGGCTCGACAGGCCAAGGGCGAGAAGTCGCTCAATGAACAGCAGGCGCTGAATCAGCAACTCCAGCTCTTGCGGCAACAGCATGGGCGCAATCCCCGGCCTCTGTTCAATACGGGTAACAACACCAGGATCCTGGCGCGCGGAGGCGAGGATCCTCAGCGGCGAGACAAGCTGCGCAGCCTCTACAGCGTTGCGGTGACCGAACAGCTGAACGTGGTCGGGCTGATCGAGGCTCTGCTGAATAGCACCCAGGACGATGGGCAGAAGGATGGCCGCGAAGGCTTCGAAGCCGTCCTGCGCGAGATCCGCCAGGTCGTGGCGCGCGACATGGCGGAACTCGATGGCAGCGCATCACCACAGAAACTGCGAACCATGATGTACGCCATGAGTACGGCGCAGTACGTGGCAACCCTGTTCGGTGGCTGCGAACACCTGCTGGGCCGCATGCGCAACAAGAATCCCGCCATGCAGGTTGAGACCTCGGCGTTTCTCAAGAACCTGCTGGGGCTGATCGGCAAGGGCATGGCGCTGAACGACACCCTTCAGCTGACGCAGCAGATCGGCGGTCGGCAACTCAAGCACCAGCTGGCGTTCCTCAACGGGCTGCGCCCGATGCTGCATCAGCTGCCAATCATGCTATGGCGCGACATCAAGAGCCGACAGAACGCGCTGGGTAATCTGCTCTCGCTGATGGCGGCGTTGACCAGTGAAGAGCAGAAGCGCCTCAAGGAGGGCATCGCCTGA,MIRPIPNASSILHIPSVARAASPATPLAQVRSGAATTTGTSAQQASKFAAALVQNSRELGRRDLFAKINALQSQASKQHELAHLLLATHERGMEESARALRKTLKNGQLLRMERGKLLKQIVDSMAGDAAKAHALLQAAARQAKGEKSLNEQQALNQQLQLLRQQHGRNPRPLFNTGNNTRILARGGEDPQRRDKLRSLYSVAVTEQLNVVGLIEALLNSTQDDGQKDGREGFEAVLREIRQVVARDMAELDGSASPQKLRTMMYAMSTAQYVATLFGGCEHLLGRMRNKNPAMQVETSAFLKNLLGLIGKGMALNDTLQLTQQIGGRQLKHQLAFLNGLRPMLHQLPIMLWRDIKSRQNALGNLLSLMAALTSEEQKRLKEGIA,TIGRFAM: type III secretion effector delivery regulator, TyeA family ;,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_009439,Chromosome,Pmen_0039,YP_001185545,146305080,Protein,37328,39412,,,type III secretion protein, HrcV family,,,ATGGGAGCGGTCATCGATTTTCTGAACGGTATCGCGCTGGCTGCCATGCGCCGCTCGGAGATCGTCGGCGCCTTCGTGGTCATCGCCATCATCTTCATGATGATCACGCCGATGCCCACGGAGCTGATGGATGTGCTGATCGCGATCAATATCTGCATTTCCTGCCTGATGATCATGCTGGCCATGCATCTGCCCCGGCCCCTGGCGTTCTCGACGTTTCCGGCGGTGCTGCTGCTGACCACCATGTTTCGCCTGGCCCTGTCGATCTCCACCACGCGCCTGATCCTGCTCGAGCAGGACGCCGGGCACATCGTCGAGGCATTCGGCGAGTTCGTCGTGGGTGGCAACCTGGCCGTCGGCGTGGTGATATTCCTGATCCTGACCATCGTCAACTTCCTCGTCATCACCAAGGGCTCGGAGCGGGTGGCGGAGGTCGGCGCGCGCTTTACCCTGGACGCCATGCCCGGCAAGCAGATGTCCATCGACAGCGATCTGCGCGCCAACCTCATTTCGGTGAGCGAGGCGCGTAACCGCCGGGCCGAACTGAACAAGGAAAGCCAGCTGTTCGGCGCCATGGATGGGGCGATGAAGTTCGTTAACGGCGATGCGATCGCCAGCCTGATCATCATCGCCATCAACATGATCGGCGGTATGGCCATCGGCGTGGCGCAAATGGGGATGAGCGCGGGCGATGCCTTGCAGGTGTACACCATCCTCACCATTGGTGATGGCCTGGTTTCGCAGATCCCGGCGCTGATGATTTCTGTCACCGCCGGTATCGTCATCACCCGGGTGCCCAACGAGCAGAGGCAGCAGACCAACATCGGCCGGGAGATCGCCGAGCAGCTGACCAGTCAGCCCAAGGCCTGGATCATCGCCTCGGTGGCCATGCTCGGTTTCGCCGCATTGCCGGGCATGCCCACCCTGACCTTCATCATCATCGCCATCATCTGTGGTTGCGGCGGCTTGTTGCAGTTGCAACGTGCGCGTACTTCCAGTGCGGCGGAGGATGATCCGGAAGTCATCCCTCCGGAGATGAATGGTCAGGAGGACCTGCGTACCTTCTCGCCAAGTCGTCAGTTCGTGCTGCAATTTCATCCCAGCCAGGATGCGCATCAGGTCGCGGCCCTGCTCAGCGAGATTCGCCAGCGGCGCAACAGGCTGGTGGTGCAGTACGGCCTCACGTTGCCCTCGTTCATCATCGAACAATCGCCGCTCCTGCCTCCGGACGAATTCCGTTTCTCGGTTTACGAGGTGCCTCTGTTCAAGGCCACGCTGACGCAAAGCCAGTTGGCCGTGCCCGCACGCAGTCTGCCACCGGGGGCTGTTTGCGGTTCCAACGAGCGTCAGGAGGAAGACTGGGTATGGATGCCGGCCGATGATCCCATGCTGCAGAACGACGAGTTGGAGATCGTCAGCGCCGCGACGCTGATCGTCGAGCGCATGGAGCGTGCCATGCAGGCCTGCGGGCCGCAGTTCATCGGCTTACAGGAAACCAAGGCGATCCTCGGCTGGCTGGAATCGGAGCAGCCCGAGCTTGCCCAGGAAATGCAGCGGGTACTGCCCTTGGCCAGGTTTTCCGCGATTCTCCAGCGTCTGGCCGCCGAATGCGTGCCGCTGCGCTCCGTTCGCCTGATCGCGGAGACCCTGATCGAGCACGCCCAGCACGAGCGAGATGTGACTGTGCTGACCGACTACGTACGCATCGCCCTCAAGTCGCAGATCTACCACCAGTACTCGAGCGCGGAGGGCTTGCTGGTGTGGCTGCTGACCCCGGAAAGCGAAGGCATCCTGCGTGACGGCTTGCGTCAGACCCAGACCGAGACCTTCTTCGCCCTGAACCATGAAACCAGCCAGCTACTGCTGCAACAACTGCACATGGCCTTTCCGATGCGGGCGCCTGAGCAGGCGGTGCTGCTGGTGCCGCAGGATCTGCGCAGCCCACTGCGCACGCTGCTGCAGGAGGAGTTTCACCATGTGCCGGTGCTGTCCTTCGCTGAAATCAGCAGCGCTGCTCGGATCAAGGTAATGGGTCGATTCGACCTGGAAGAGTCGGTGGCGCTGGACAATGACTACGCCGCTTGA,MGAVIDFLNGIALAAMRRSEIVGAFVVIAIIFMMITPMPTELMDVLIAINICISCLMIMLAMHLPRPLAFSTFPAVLLLTTMFRLALSISTTRLILLEQDAGHIVEAFGEFVVGGNLAVGVVIFLILTIVNFLVITKGSERVAEVGARFTLDAMPGKQMSIDSDLRANLISVSEARNRRAELNKESQLFGAMDGAMKFVNGDAIASLIIIAINMIGGMAIGVAQMGMSAGDALQVYTILTIGDGLVSQIPALMISVTAGIVITRVPNEQRQQTNIGREIAEQLTSQPKAWIIASVAMLGFAALPGMPTLTFIIIAIICGCGGLLQLQRARTSSAAEDDPEVIPPEMNGQEDLRTFSPSRQFVLQFHPSQDAHQVAALLSEIRQRRNRLVVQYGLTLPSFIIEQSPLLPPDEFRFSVYEVPLFKATLTQSQLAVPARSLPPGAVCGSNERQEEDWVWMPADDPMLQNDELEIVSAATLIVERMERAMQACGPQFIGLQETKAILGWLESEQPELAQEMQRVLPLARFSAILQRLAAECVPLRSVRLIAETLIEHAQHERDVTVLTDYVRIALKSQIYHQYSSAEGLLVWLLTPESEGILRDGLRQTQTETFFALNHETSQLLLQQLHMAFPMRAPEQAVLLVPQDLRSPLRTLLQEEFHHVPVLSFAEISSAARIKVMGRFDLEESVALDNDYAA,TIGRFAM: type III secretion protein, HrcV familyPFAM: type III secretion FHIPEP protein ;,,,,,,,,Cytoplasmic Membrane,Class 3,,TIGR01399 ,hrcV ,type III secretion protein, HrcV family ,subfamily ,0 , ,Protein fate ,Protein and peptide secretion and trafficking ,PF00771 ,FHIPEP, FHIPEP family.. ,COG4789 ,EscV, Type III secretory pathway, component EscV [Intracellular trafficking and secretion]. ,Intracellular trafficking and secretion 
NC_009439,Chromosome,Pmen_0040,YP_001185546,146305081,Protein,39429,40343,,,type III secretion apparatus protein, YscD/HrpQ family,,,ATGTACGAACTGAGGGTATTGACCGGCCTGCACAAGGGCGCCGCACTGCCACTGATCGGTGAGCAATGGCTCATCGGTGCCGAAGAGGGTCGTGATCTGGCGTTGCACGATCCAGGGGTGGAAACCCTTCACTGCCGCTTGCAGCGGGCGGGCGACAGCTGGCAGTTGCTGGCCGAGGAAGGGGCCGTGCTCGACGGGGAGGGACACTCCCATGCGTCGATGGAAGTACTGCTTGATTGCCCACTCGTGCTCGGCTCCGTCTGGGTGTACCTGGCCGCCGCTGAGTCACCCTGGCCAACGTTGCCGGCACTCGTCGGTCATCCCGGCGAAGACGGCGACAGCAAGGCCTCTGCGGAGGTCGGGGAACGAGGCCGTGTGCGTCTGCTCAATCGCGGCACCGGCATAGCGCTTGGCGTCTTGCTGGGCGTCATGGGCAGCGCCTGGAGCCTGAGTTGGCCGGTTGGCTCCGCTTCGGGACCTGCGGCGGTGCCGACGAGCGAGCCTGCCGCGGTTAGCGATGGCCGCACCCTATTGCAGAAGGACGAGGCGGTGCGCGTGCTCAAGCAGATGCTGAGTGAACGCCTGCTGACGGCCGTCTCGGTCGAGCCGAATGAGCAAGGTGTGGCGCTCATGGGCTCGCTGCAGGGCGAAGGCATGCTGGTCTACGAACGCATGCTGCAACGTTTCGAGAAGGACTATGAAACGGATTTCGTGTTGCAGGACCAGGTTTCAAGTGGTGCCGCAGGGCTGCCATTCGTGATCGTGCAGATCATTGCCGGCCCGCGTGGGCACCTGGTGATGGAGGATGGCCGGCGCTTGCATGTCGGCGACAAGCTGGACGGCCTGCGCCTGGTACGCATCGATAACGAGCGCATCCTGTTCGATGGTGTCCGCCGTTATGAGGTGGCCTGGTGA,MYELRVLTGLHKGAALPLIGEQWLIGAEEGRDLALHDPGVETLHCRLQRAGDSWQLLAEEGAVLDGEGHSHASMEVLLDCPLVLGSVWVYLAAAESPWPTLPALVGHPGEDGDSKASAEVGERGRVRLLNRGTGIALGVLLGVMGSAWSLSWPVGSASGPAAVPTSEPAAVSDGRTLLQKDEAVRVLKQMLSERLLTAVSVEPNEQGVALMGSLQGEGMLVYERMLQRFEKDYETDFVLQDQVSSGAAGLPFVIVQIIAGPRGHLVMEDGRRLHVGDKLDGLRLVRIDNERILFDGVRRYEVAW,TIGRFAM: type III secretion apparatus protein, YscD/HrpQ family ;,,,,,,,,Unknown,Class 3,,TIGR02500 ,type_III_yscD ,type III secretion apparatus protein, YscD/HrpQ family ,equivalog ,3.2e-19 , ,Protein fate ,Protein and peptide secretion and trafficking ,,,,,
NC_009439,Chromosome,Pmen_0041,YP_001185547,146305082,Protein,40340,41698,,,ATPase, FliI/YscN family,,,GTGAATGCTCCTGCCACCGAGCTGCAGGAATGGGTACGTTTTCAGGCTGCTCGGCTGGGCACGTTGTCGGCGGTGCAGGTCAGCGGCCGGGTGAGCGCCGTCAGCGGCATCCTGCTGGAGTGCCAGGTGCCAGCCGCCAAGGTGGGCGAGTTGTGCGAGGTGAGCAAGGCCGATGGCAGCAACATGCTGGCCGAGATAGTCGGCTTCACGCCTGACTGCACCCTGCTCAGCGCACTGGGCACGCCGGACGGCATCCAGGTTGGAGCGACCATTCGCCCTCTGGGCATTGCCCATCGTATCGGTGTCGATGACAGCCTGCTTGGCAGCGTGCTGGATGGTTTCGGCCGGCCGTTGCTGGGCCAGGCGCAGGGGGCTTTCGCCGGCCCTCATGATGCTCGGCAGACGCTACCGGTGATAGCCGATGCGCTGCCACCGACGCAACGTCCGCGTATCACCACTGCCCTGCCGACCGGTATTCGCTCCATCGACAGCGCCATGCTGCTGGGCGAGGGGCAGCGGGTGGGCCTGTTCGCCGGGGCCGGCTGCGGCAAGACCACGCTGATGGCGGAACTGGCCCGCAATATGGCCTGCGATGTGATCGTGTTCGGCCTTATTGGCGAACGTGGCAGGGAACTGCGTGAGTTCCTCGACCACGAACTGGACGACACCCTGCGCAAACGCTCGGTGCTGGTCTGCGCGACGTCCGATCGTTCCAGTATGGAGCGGGCTCGCGCAGCCTTTACCGCCACGGCCATCGCCGAGGCATACAGAGCCAGAGGCCTGAAGGTATTGCTGTTGATCGACTCACTGACCCGTTTCGCCCGCGCCCAGCGTGAAATCGGTATTGCCGCCGGCGAGCCGCTTGGGCGTGGCGGCTTGCCTCCTTCGGTCTACACCTTGCTGCCGCAACTGGTCGAGCGTGCCGGAATGAGCGAGAGCGGCTCGATCACGGCGTTGTACACCGTGCTCATCGAGCAGGACTCGATGAACGACCCGGTGGCCGACGAGGTGCGTTCGTTGCTCGATGGACACATCGTGATGTCGCGCAAGTTGGCCGAGAAAGGCCACTACCCGGCCATCGACGTGCCGGCCAGCATCAGTCGTGTACTCAGCAATGTCGCCCCCCGCGAGCATCAGCGTGCCAACAATCGGCTGCGTCGCCTGATGGCGGCCTATCGACAGGTGGAGATGCTGTTGCGTCTTGGCGAGTACCAGCCAGGCACCGACCCGGTGACGGATTGCGCCGTACAGCTGCATGAGCCGATCAATGCCTTCCTGCGTCAGGACCTGCGCGAGCCTTCGCCGTTGCCGGTGACCCTTGAGGCCCTGATGCAACTGACCGCGGCGCTTCCGGAGTGA,MNAPATELQEWVRFQAARLGTLSAVQVSGRVSAVSGILLECQVPAAKVGELCEVSKADGSNMLAEIVGFTPDCTLLSALGTPDGIQVGATIRPLGIAHRIGVDDSLLGSVLDGFGRPLLGQAQGAFAGPHDARQTLPVIADALPPTQRPRITTALPTGIRSIDSAMLLGEGQRVGLFAGAGCGKTTLMAELARNMACDVIVFGLIGERGRELREFLDHELDDTLRKRSVLVCATSDRSSMERARAAFTATAIAEAYRARGLKVLLLIDSLTRFARAQREIGIAAGEPLGRGGLPPSVYTLLPQLVERAGMSESGSITALYTVLIEQDSMNDPVADEVRSLLDGHIVMSRKLAEKGHYPAIDVPASISRVLSNVAPREHQRANNRLRRLMAAYRQVEMLLRLGEYQPGTDPVTDCAVQLHEPINAFLRQDLREPSPLPVTLEALMQLTAALPE,TIGRFAM: ATPase, FliI/YscN familyPFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region ;,,,,,,,,Cytoplasmic,Class 3,,TIGR01026 ,fliI_yscN ,ATPase FliI/YscN family ,subfamily ,1.4e-159 ,3.6.3.14 ,Energy metabolism ,ATP-proton motive force interconversion ,PF00006 ,ATP-synt_ab, ATP synthase alpha/beta family, nucleotide-binding domain. This family includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho.. ,COG1157 ,FliI, Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion]. ,Cell motility and secretion / Intracellular trafficking and secretion 
NC_009439,Chromosome,Pmen_0042,YP_001185548,146305083,Protein,41701,42147,,,hypothetical protein,,,ATGGAAGACGAGCTGGAAGCCGATCCGCAACGCCTGGCCCTCGAACAGGCCATTCAAGTGCTCAGGCCCCTGCGCCAGCACCGCCAGGCAAGTGCCGAGCGGCAGCAGCGGCAGATGCAGCAGACGCTTGCCAGCAGCCGTGAACGTTTGGCGGAAACCCGTGAACGGCTGGGCAGCGAGCGCCAGGCGCAATTGGCACGTCGCGAGGCACTGGCGCAGCAACACGTGGATCGTTGCCTGAGCCTGGATGAAGTCGAGCTCTGGCACAACCAGGAGCGGGCGATGCTCGATCGCCTGGCGCACATGCGTCAGGACATTCACCGGCAGGGCCTGGCGATCGAGCAGCAACAACATCAACTGCAGGTCATGCAGGCTCAAGCCAAGGCGGCTCAGCGTGCGGTGGAAAAACTGTCCTGCCTGGCCGAGGCGATCAACGATGAAAACTGA,MEDELEADPQRLALEQAIQVLRPLRQHRQASAERQQRQMQQTLASSRERLAETRERLGSERQAQLARREALAQQHVDRCLSLDEVELWHNQERAMLDRLAHMRQDIHRQGLAIEQQQHQLQVMQAQAKAAQRAVEKLSCLAEAINDEN,,,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,,,,,
NC_009439,Chromosome,Pmen_0043,YP_001185549,146305084,Protein,42137,42673,,,hypothetical protein,,,ATGAAAACTGAACACGCAGCGCGCCCTCAGCTGATGCAAACCCTGCAGCAGGGTGCAGCCCCACAGGGCAACCTGGCTGCACTCAAGGAGACGGGCTGGTCACGACGCAGCGATTTCGAGTCGAGCCTGTCGAGTTGGTCGAACAGCGCAGTGCCCACCCTGGCCGATGGGCAGCTGTTCGCCCAGTTGATTCAGCCCGTTCATTCAGGTGGCGATCAATCCGGTTTTGGCGGCAGCGGCGTTGCATCGTTTCAGGCTCGGCCCGATGGCATGGCGGGAGAGCTGGTCGATGAGCTGACGCAGCGTCTACCCAGCCTGCCGAGCGGCCCGATCAACGTCACCCTGTTGATGCCGAACCTGGGCCGGGTACAGGTGCGCGCGGGCAAGCGCGACCAGCAACTGGAAGTGGAGCTGGGCTTCGAGCGGCAGGATGTGCTGGAGCGTCTGCGCGCGCAGGAACGCACCTGTGAAAGCGCGTTGGGCGAAGCGCTTGGTCAGCCTGTGCGCTTATGGATGCGTGAAGAGGCGAGCGTATGA,MKTEHAARPQLMQTLQQGAAPQGNLAALKETGWSRRSDFESSLSSWSNSAVPTLADGQLFAQLIQPVHSGGDQSGFGGSGVASFQARPDGMAGELVDELTQRLPSLPSGPINVTLLMPNLGRVQVRAGKRDQQLEVELGFERQDVLERLRAQERTCESALGEALGQPVRLWMREEASV,,,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,,,,,
NC_009439,Chromosome,Pmen_0044,YP_001185550,146305085,Protein,42670,43386,,,hypothetical protein,,,ATGACGCCGCTGGCCCTGGGCGCGATCTCCAGCGTATTGGCCCAGGCCTCACGTGCGCTGGGTGCCGGCGTCACACTCAACTTCCGGGCCCGTGGTCATGACGGCGAGCTGAAACTGCTGCCCATGCTCCCTAATGCGCCGTCGCGGGCCGGAACCTGGCTGCATACGAATGTCGGGCCGCTGTGTCTGGGCGACGCTGGGGCGGTGTTGAGTCTGCTGGGTGAGCTGCCGGTTACGTGCGAAGGCGATGACCAGCCCTGGTACTGGCAACTGATCAGTCAGCGCCTCAGTCAGGGTGTTGCGGGTGCCTTGGGGGCGATCAGCCCTTTGGACGGGGATGCTCCAGCGGGCGCGCTGCTGCATGCCCAACTGCACGTTCGCCTGGGCGATGAACGAGTGCAGGCTCAACTCGCCGCACCACCGGAAACCTGGCTGAACTGGCTGCAGGCGCCTGAATGGCAACGCATCAGGACAGCGCTGCACGAGGCTCTGGTGTTGCACATTCCTCTGCAACTGGGGCAGCTGGAGCTCAGCGCCGAGCAATTGGCCTCACTGCAACCCGGCGACATCGTGCTGCCTGCCCAGGCCAGCTTCACCTGCGACGGCAGCGGTCATCTGGCATTGGCCAGCCGGTATTGGGCGGCCCAGGTGAGCAGTCGTGGCGAAAAACTCTTCCTGAATCTGCGTCACGAGGAAAGCAGCCAGCATGAGCACTGA,MTPLALGAISSVLAQASRALGAGVTLNFRARGHDGELKLLPMLPNAPSRAGTWLHTNVGPLCLGDAGAVLSLLGELPVTCEGDDQPWYWQLISQRLSQGVAGALGAISPLDGDAPAGALLHAQLHVRLGDERVQAQLAAPPETWLNWLQAPEWQRIRTALHEALVLHIPLQLGQLELSAEQLASLQPGDIVLPAQASFTCDGSGHLALASRYWAAQVSSRGEKLFLNLRHEESSQHEH,,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_009439,Chromosome,Pmen_0045,YP_001185551,146305086,Protein,43376,43777,,,surface presentation of antigens (SPOA) protein,,,ATGAGCACTGAACATCTATCCCAGGAAAGCTTGCAGGAGATGGCGGAAATGGATGCTGATGCGCTGCCTGAGGGTTTCGAGGAACGACCTGGCGAAATGCATCTGGAAGGTCAGGAGTTCGCGCCGCAGGACGAGCACGCGAGTGCCGTCGAGCCCCAGCAGATGGCGGCGCTTGGCAGCATCGCGCATTTGCCGCTGCAGCTTACCCTGCGCTGCGGCCAGTTGACCTTGAGCGTCGATCAACTGCGGCAGCTGGGCAGCGGCAGCGTTCTCGAGATCCATGGGGTCGCCCCTGGCCATGCCACCCTTTGCCATGGTGAGCGTGTGGTGGGTGAGGGAGAGTTGGTGGATGTCGATGGGCGGCTGGGTCTGCAGATCACCCGGATGGCGACGCTGTCATGA,MSTEHLSQESLQEMAEMDADALPEGFEERPGEMHLEGQEFAPQDEHASAVEPQQMAALGSIAHLPLQLTLRCGQLTLSVDQLRQLGSGSVLEIHGVAPGHATLCHGERVVGEGELVDVDGRLGLQITRMATLS,PFAM: surface presentation of antigens (SPOA) protein ;,,,,,,,,Cytoplasmic,Class 3,,TIGR02480 ,fliN ,flagellar motor switch protein FliN ,equivalog_domain ,7.7e-05 , ,Cellular processes ,Chemotaxis and motility ,PF01052 ,SpoA, Surface presentation of antigens (SPOA) protein.. ,COG1886 ,FliN, Flagellar motor switch/type III secretory pathway protein [Cell motility and secretion / Intracellular trafficking and secretion]. ,Cell motility and secretion / Intracellular trafficking and secretion 
NC_009439,Chromosome,Pmen_0046,YP_001185552,146305087,Protein,43774,44427,,,Yop virulence translocation R,,,ATGATTCTGGACGGAATGAACCCCATCATGCTGGCGCTGTTCCTTGGCGCCCTGTCGTTGATTCCCTTCCTGCTCATCGTCTGCACGGCATTTCTCAAGATCGCCATGACGCTGATGATCACCCGTAACGCCATTGGCGTGCAGCAGGTTCCACCGAACATGGCGATCTACGGTATCGCCCTGGCGGCGACCATGTTCGTGATGGCGCCGGTTGCCTACGAAATCCAGAACCGACTCAGTGACAACCCCCTGGACCTGTCGTCCACGGACAGTCTCCAGGCCAGTGCCGGCAACGTGGTGGAGCCGTTGCAGGACTTCATGGTGAACAACACCGACCCGGACATCGCCACGCATCTTCTGGAAAACACCCAGCGCATGTGGCCCAGGGAAATGTCCGAGAAGGCCAGCAAAAGCGACCTGCTGCTGGCGATTCCGGCGTTCGTGCTGTCCGAGCTGCAGGCTGCGTTTCAGATCGGTTTTCTGATCTACATCCCGTTCATCGTGATCGACCTGATCATTTCCAATCTGCTGCTGGCGCTGGGCATGCAGATGGTGTCGCCGATGACCATCTCGCTGCCGCTGAAGCTGTTGCTGTTCGTCCTGGTGGACGGCTGGACGCGGCTGCTCAACAGCCTCTTCTACTCCTATATGTGA,MILDGMNPIMLALFLGALSLIPFLLIVCTAFLKIAMTLMITRNAIGVQQVPPNMAIYGIALAATMFVMAPVAYEIQNRLSDNPLDLSSTDSLQASAGNVVEPLQDFMVNNTDPDIATHLLENTQRMWPREMSEKASKSDLLLAIPAFVLSELQAAFQIGFLIYIPFIVIDLIISNLLLALGMQMVSPMTISLPLKLLLFVLVDGWTRLLNSLFYSYM,TIGRFAM: Yop virulence translocation RPFAM: type III secretion system inner membrane P protein ;,,,,,,,,Cytoplasmic Membrane,Class 3,GO:0015448 ;,TIGR01102 ,yscR ,type III secretion apparatus protein, YscR/HrcR family ,equivalog ,1.1e-129 , ,Protein fate ,Protein and peptide secretion and trafficking ,PF00813 ,FliP, FliP family.. ,COG4790 ,EscR, Type III secretory pathway, component EscR [Intracellular trafficking and secretion]. ,Intracellular trafficking and secretion 
NC_009439,Chromosome,Pmen_0047,YP_001185553,146305088,Protein,44435,44698,,,type III secretion protein, HrpO family,,,ATGGAGGCGTTGGCGCTGTTCAAGCAAGGCATGTTCCTGGTGGTTATCCTGACTGCACCGCCATTGGCCGTGGCGGTGCTGGTCGGGGTGACGACATCGCTGGTACAGGCGCTGATGCAGATGCAGGATCAGACGCTGCCGTTCGGTTTGAAACTGGCTGCCGTCGGCCTGACCCTGGCGATGACCGGACGCTGGATCGGCCTGGAGTTGATTCAGTTCACCAATATGGCGTTCGACCTGATTGCCCGCTCAGGGGGCAATTAG,MEALALFKQGMFLVVILTAPPLAVAVLVGVTTSLVQALMQMQDQTLPFGLKLAAVGLTLAMTGRWIGLELIQFTNMAFDLIARSGGN,TIGRFAM: type III secretion protein, HrpO familyPFAM: export protein FliQ, family 3 ;,,,,,,,,Unknown,Class 3,,TIGR01403 ,fliQ_rel_III ,type III secretion protein, HrpO family ,subfamily ,5.5e-33 , ,Protein fate ,Protein and peptide secretion and trafficking ,PF01313 ,Bac_export_3, Bacterial export proteins, family 3. This family includes the following members; FliQ, MopD, HrcS, Hrp, YopS and SpaQ All of these members export proteins, that do not possess signal peptides, through the membrane. Although the proteins that these exporters move may be different, the exporters are thought to function in similar ways.. ,COG4794 ,EscS, Type III secretory pathway, component EscS [Intracellular trafficking and secretion]. ,Intracellular trafficking and secretion 
NC_009439,Chromosome,Pmen_0048,YP_001185554,146305089,Protein,44699,45499,,,type III secretion protein SpaR/YscT/HrcT,,,ATGCCATTGGATGCCCAGGCCGCTTTCGAGCTGATGCTGGGGCTAGGTCTCGGCGTGGCCCGCCTGCTGCCCTGCATGCTGCTGGTGCCTGCATTCTGTTTCAAACACCTCAAAGGCATTCTGCGTTATGGCGTGGTGATCGCCGTGGCGATGATCCCGGCCCCTTCGATCGGCGAGGCCCTGGCCAGTGAGGGGGCCAGTTTCGGCGTGGTCATGGGGCTGCTGATCAAGGAGGTCATGCTCGGTGCGCTGCTTGGCGTGTTGCTGCACATGCCGTTCTGGATGTTCGCCTCGGTCGGCGCTTTGCTCGACAGTCAGCGTGGTGCTCTCAGTGGTGGTCAGCTCAACCCGGCGCTCGGCCCGGACGTGACGCCGATGGGCGAGCTGCTGCAGGAAGTGCTGGTAATGCTGGTCATTCTGTTCGGCGGGTTACCTTTGATTACCCAGGTGATCTGGGACAGCTACTTGATCTGGCCGCCCACGGTCTGGCTGCCGATCCTGACCGAGGACGGCCTGGGCGTGCTGCTCTCGCAACTCAGCCGAACGTTGCAGCACATGCTGCTCTATGCCGCGCCCTTCATTGCCCTGCTGCTGCTGATCGAGGCGGCCATGGCGATCATCAGTCTGTATGCGCAACAACTGAACGTATTCATCCTGGCAATGCCGGCCAAGAGCATTGCCGGGCTGGCTTTCTTGCTGATCTATCTGCCCACGCTTCTCGAACTGGGTGGTGGGGAGGTTCAGCAGTTTCAGCTTCTCAAGCAACTGCTGGGCAGCCTCGTCCAGGTGCCGGTGCCATGA,MPLDAQAAFELMLGLGLGVARLLPCMLLVPAFCFKHLKGILRYGVVIAVAMIPAPSIGEALASEGASFGVVMGLLIKEVMLGALLGVLLHMPFWMFASVGALLDSQRGALSGGQLNPALGPDVTPMGELLQEVLVMLVILFGGLPLITQVIWDSYLIWPPTVWLPILTEDGLGVLLSQLSRTLQHMLLYAAPFIALLLLIEAAMAIISLYAQQLNVFILAMPAKSIAGLAFLLIYLPTLLELGGGEVQQFQLLKQLLGSLVQVPVP,TIGRFAM: type III secretion protein SpaR/YscT/HrcTPFAM: type III secretion system inner membrane R protein ;,,,,,,,,Cytoplasmic Membrane,Class 3,,TIGR01401 ,fliR_like_III ,type III secretion protein, SpaR/YscT family ,subfamily ,5.2e-94 , ,Protein fate ,Protein and peptide secretion and trafficking ,PF01311 ,Bac_export_1, Bacterial export proteins, family 1. This family includes the following members; FliR, MopE, SsaT, YopT, Hrp, HrcT and SpaR All of these members export proteins, that do not possess signal peptides, through the membrane. Although the proteins that these exporters move may be different, the exporters are thought to function in similar ways.. ,COG4791 ,EscT, Type III secretory pathway, component EscT [Intracellular trafficking and secretion]. ,Intracellular trafficking and secretion 
NC_009439,Chromosome,Pmen_0049,YP_001185555,146305090,Protein,45496,46575,,,type III secretion protein, YscU/HrpY family,,,ATGAGCGAAAAAACGGAGAAGGCGACGCCCAAGCAACTGCGTGATGCGCGGGAAAAGGGGCAGATTGCGCAGAGTCAGGACGTCAGCAAGCTGTTGATCCTGCTGATGGTCAGCGAAATCACCTGGAGCCTGGCCACGGAGAGCGTACAACGCCTGCAGCACCTGATGGCGCTTGCCATCAATGCGACCGGGCAGCCGTTTCTGCGGATTGTGGGGCAACTGGTCGACGAGGCCGTGACCGTATTGCTCGGCTTCCTGATCTTCAGTGTCGGTGTCGCCATGGTGATGCGTCTGGCCGGAGGCTGGGCTCAGTTCGGGTTTCTCTTCGCACCCAAGGCACTGAAGATCGATTTCAACAAGCTCAATCCGTTTCCCCAGCTCAAGCAGATGTTCTCTGCGCAGAACCTAACCAACTTGCTGATGAGCATCCTCAAGGCTGCAGTCATCGGCATCACGCTCTACGTTCTGCTCTGGCCAGAGCTGGGTACATTGATCCTGCTGGCCAACTCCGACCTGGATACCTACTGGCAATCGTTGATGGAGGTGTTTCGCTACATCCTGCGCTGCACCCTGGGTCTACTCCTGGTGCTGGCTGCAGTGGATTTCGGCCTGCAGAAATACTTCCATGCCAAGAAACTGCGCATGAGCAAGGATGACGTGAAGAAGGAGTACAAGCAGTCGGAGGGCGACCCGATGGTGAAGGGGCAGCGACGCCAACTGGCGCACGAACTGCTCAATCAGCCGCCTTCGACCGCGGCAAGGCCAGTGGAGGAGGCCGATATGCTGGTGGTTAACCCGACCCACTATGCCGTGGCCCTGTACTACCGTCCGGGCAAGACACCCTTGCCGATGATTCACTGCAAGGGCGAGGACGAAGACGCATTGGCCCTGATCGCGCGGGCCAAGAAAGCCAGGATTCCCGTGGTGCAGAGCGTCTGGCTCGCGCGCACCCTGTACAAGGTCAATGCAGGACGCCATATCCCCCGTCCGACCCTGGAGGCTGTCGCCCACATCTATCAGTTGGTGAAACAGCTGGACGAGGTGACCGACGAAATCATCCAGGCCGACTCCGGGCTCTGA,MSEKTEKATPKQLRDAREKGQIAQSQDVSKLLILLMVSEITWSLATESVQRLQHLMALAINATGQPFLRIVGQLVDEAVTVLLGFLIFSVGVAMVMRLAGGWAQFGFLFAPKALKIDFNKLNPFPQLKQMFSAQNLTNLLMSILKAAVIGITLYVLLWPELGTLILLANSDLDTYWQSLMEVFRYILRCTLGLLLVLAAVDFGLQKYFHAKKLRMSKDDVKKEYKQSEGDPMVKGQRRQLAHELLNQPPSTAARPVEEADMLVVNPTHYAVALYYRPGKTPLPMIHCKGEDEDALALIARAKKARIPVVQSVWLARTLYKVNAGRHIPRPTLEAVAHIYQLVKQLDEVTDEIIQADSGL,TIGRFAM: type III secretion protein, YscU/HrpY familyPFAM: type III secretion exporter ;,,,,,,,,Cytoplasmic Membrane,Class 3,,TIGR01404 ,FlhB_rel_III ,type III secretion protein, hrpY/hrcU family ,subfamily ,1.2e-161 , ,Cellular processes ,Pathogenesis ,PF01312 ,Bac_export_2, FlhB HrpN YscU SpaS Family. This family includes the following members: FlhB, HrpN, YscU, SpaS, HrcU SsaU and YopU. All of these proteins export peptides using the type III secretion system. The peptides exported are quite diverse.. ,COG1377 ,FlhB, Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion]. ,Cell motility and secretion / Intracellular trafficking and secretion 
NC_009439,Chromosome,Pmen_0050,YP_001185556,146305091,Protein,46762,47412,,,hypothetical protein,,,ATGACCCTGATTCCTGCGTCGGTCAGTCGGCCCGTGCTGGCCGGCCTGATCGCCTTCCATATCCTCATCATCATCGCCAGCAACTACCTGGTGCAGCTGCCGATCACCCTGTTCGGCTGGCATACCACCTGGGGTGCGTTCAGCTTCCCGTTCATCTTCCTGGCTACCGACCTCACCGTGCGTCTGATCGGCAAGCATGCCGCGCGGGTGGTGATCGCCCGCGTCATGCTGCCGGCGCTGGTCGCCTCCTACGTGGTGTCGGTGCTGTTCCATGAAGGCGTCTTCGGCGGCCTGGCGGTGCTGGGCGACTTCAACCTGTTCGTCTTCCGTATCGCCGTGGCCAGCTTCCTGGCCTATGCCTTCGGCCAGTTGCTCGATATCCAGGTGTTCGACCGCCTGCGCCAGATGCGCCAGTGGTGGATCGCGCCGACGGCCTCGACCATCTTCGGCAACCTGCTCGATACCTTCCTGTTCTTCTCGGTGGCCTTCTGGCGCAGCGACGATCCGTTCATGGCGGCCAACTGGGTGGAGATCGCCACGGTGGACTACGTGATCAAGCTGGCCATCAGCCTGATGCTCTTCGTACCGCTGTACGGCATGCTGCTCAGCGCCATCGTCCGCGCCCTGCCCCAGCGCCCGGCCACGGCCTGA,MTLIPASVSRPVLAGLIAFHILIIIASNYLVQLPITLFGWHTTWGAFSFPFIFLATDLTVRLIGKHAARVVIARVMLPALVASYVVSVLFHEGVFGGLAVLGDFNLFVFRIAVASFLAYAFGQLLDIQVFDRLRQMRQWWIAPTASTIFGNLLDTFLFFSVAFWRSDDPFMAANWVEIATVDYVIKLAISLMLFVPLYGMLLSAIVRALPQRPATA,TIGRFAM: conserved hypothetical integral membrane proteinPFAM: protein of unknown function DUF165 ;,,,,,,,,Cytoplasmic Membrane,Class 3,,TIGR00697 ,TIGR00697 ,conserved hypothetical integral membrane protein ,subfamily ,8.7e-53 , ,Hypothetical proteins ,Conserved Hypothetical proteins ,PF02592 ,DUF165, Uncharacterized ACR, YhhQ family COG1738.. ,COG1738 ,COG1738, Uncharacterized conserved protein [Function unknown]. ,Function unknown 
NC_009439,Chromosome,Pmen_0051,YP_001185557,146305092,Protein,47766,47452,,,Tetratricopeptide TPR_2 repeat protein,,,ATGAGCACAGAAGCACTGGAAAAGATGCTGGCCAAGGGCATGGACAACGCCCTGCTGCGCTTCGGCCTGGGCAAGGCCCACCTGGATGCCGGCAACGCCGCCCAGGCTGCCGAGCACCTGCAACGCTGCGTGGAGTTCGACCCCGGCTATTCCGCTGCCTGGAAACTGCTGGGCAAGGCGCTGCAGGCCGAAGGCGACATCGAGGCAGCGCGCCGGGCCTGGCAGCAGGGCCTCAATGCCGCCCAGAGCAAGGGCGACAAGCAGGCCGAGAAGGAAATGAGCGTGTTTCTGCGCAAGCTGGACAAGGTGCGCTGA,MSTEALEKMLAKGMDNALLRFGLGKAHLDAGNAAQAAEHLQRCVEFDPGYSAAWKLLGKALQAEGDIEAARRAWQQGLNAAQSKGDKQAEKEMSVFLRKLDKVR,PFAM: TPR repeat-containing protein ;,,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,,,COG3063 ,PilF, Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion]. ,Cell motility and secretion / Intracellular trafficking and secretion 
NC_009439,Chromosome,Pmen_0052,YP_001185558,146305093,Protein,49228,47855,,,TrkA-N domain protein,,,GTGAAGATCATCATTCTCGGTGCCGGCCAGGTCGGCGGCACCCTGGCGGAGCACCTGGCCAGCGAGGCCAACGACATCACCGTGGTCGACACCGACGGCGACCGCCTGCGCGACCTGGGCGACCGCCTCGACATCCGCACCGTACAGGGCAAGGGTTCCTTTCCCACCGTGCTGCGCCAGGCCGGCGCCGACGATGCCGACATGCTGGTGGCCGTGACCAACAGCGACGAAGTCAACATGATCGCCTGCCAGGTGGCCTACACCCTGTTCCACACCCCGACCAAGATCGCCCGGGTGCGCGAGTCGGCCTACCTGACCCGCGAGGCACTGTTCGACAACGAAGCGATACCGGTGGACGTGCTGATCAGCCCCGAGCAGGTGGTGACCAACTACATCAAGCGCCTGATCGAATACCCCGGCGCCCTGCAGGTGATCGACTTCGCCGACGGCAAGGCGCAGCTGGTCGCGGTCAAGGCCTACTACGGCGGTCCGCTGGTGGGCCAGCAACTGCGCCAGCTGCGCCAGCACATGCCCAACGTCGACACCCGGGTGGCCGCGATCTTCCGCCGCAACCGGCCGATCATGCCGCAGGGCGACACGGTGATCGAAGCCGATGACGAGGTGTTCTTCATCGCTGCCAAGGCCCACATCCGTGCAGTGATGAGCGAGATGCGCCGTCTCGAGGACAGCTACAAGCGCGTGGTGATCGCCGGCGGCGGCAATATCGGCGAGCGCCTGGCCGAAGCCATCGAGAGCCGCTATCAGGTGAAGATCATCGAGATGAACCCGGCGCGCTGCCGCTACCTGTCGGAGAACCTCGACAGCGCCATCGTGCTGCAGGGCAGCGCCTCGGATCGCGACCTGCTGGTGGAAGAGAACATCAACGACGCCGACATCTTCCTCGCCCTGACCAACGACGACGAGGCCAACATCATGTCGTCCTTGCTGGCCAAGCGCCTGGGCGCGCGCAAGGTGATGACCATCATCAACAACCCGGCCTACGTCGACCTGGTGCAGGGCGGCGAGATCGACATCGCCATCAGCCCGCAGCTGGCCACCATCGGCACCCTGCTGACCCACGTGCGCCGCGGCGATATCGAAAGCGTGCACAGCCTGCGCCGCGGCGCCGCCGAGGCCCTGGAGGTGATCGCCCACGGCGATGCCAAATCGAGCAAGGTCATCGGTCGCATGATCGAGGAAATCGCCCTGCCGCCGAGCACCACCATCGGCGCCATCATCCGCGACGAGGAAGTGCTGATCGCCCACGACGACACGGTGATCGAGTCCGGCGACCACGTGATCCTGTTCCTGGTCGACAAGAAGTACATCCGCGACGTCGAGCGCCTGTTCCAGGCCGGCCTGACGTTCTTCTGA,MKIIILGAGQVGGTLAEHLASEANDITVVDTDGDRLRDLGDRLDIRTVQGKGSFPTVLRQAGADDADMLVAVTNSDEVNMIACQVAYTLFHTPTKIARVRESAYLTREALFDNEAIPVDVLISPEQVVTNYIKRLIEYPGALQVIDFADGKAQLVAVKAYYGGPLVGQQLRQLRQHMPNVDTRVAAIFRRNRPIMPQGDTVIEADDEVFFIAAKAHIRAVMSEMRRLEDSYKRVVIAGGGNIGERLAEAIESRYQVKIIEMNPARCRYLSENLDSAIVLQGSASDRDLLVEENINDADIFLALTNDDEANIMSSLLAKRLGARKVMTIINNPAYVDLVQGGEIDIAISPQLATIGTLLTHVRRGDIESVHSLRRGAAEALEVIAHGDAKSSKVIGRMIEEIALPPSTTIGAIIRDEEVLIAHDDTVIESGDHVILFLVDKKYIRDVERLFQAGLTFF,PFAM: TrkA-N domain protein ;,,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,PF02254 PF02080 ,TrkA_N, TrkA-N domain. This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.. TrkA_C, TrkA-C domain. This domain is often found next to the pfam02254 domain. The exact function of this domain is unknown. It has been suggested that it may bind an unidentified ligand. The domain is predicted to adopt an all beta structure.. ,COG0569 ,TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]. ,Inorganic ion transport and metabolism 
NC_009439,Chromosome,Pmen_0053,YP_001185559,146305094,Protein,50553,49240,,,sun protein,,,ATGAATCCACGTCTGGCTGCGGCGCGTGCCCTGACCGCCGTGCTGTCCGGCAAGGCCTCGCTGGGCAGCAGCCTGCCGCCGCAACTGGACAAGGTCGAACACCACGACCGCGCCCTGGCGCAGGACCTGGCCTTCGGCGCCGCACGCTGGCAACCGCGCCTGCAACTGCTGGCCGACAAGCTGCTGGAAAAGCCCTTCAAGGCCGCCGACAAGGATGTCGAGGCGCTGCTGCTGATCGGTCTCTATCAGTTGCTGCACAGCCGCATCCCCGAGCACGCCGCCATCGGCGAGACGGTCGGCTGCGCCGGCGCGCTGAAAAAGCCCTGGGCCAAGGGCCTGCTCAACGCCGTGTTGCGCCGCGCCCAACGCGAGCACGAAGCCCTGTTCGCAGAGCTGGATCGCGACCCGGTGCTGCACACCGCGCATCCACGCTGGCTGCAAAAACAGCTCAAGTCCTTCTGGCCAGAGTATTGGCAGGCCATCTGCGCCGCCAACAACGCCCATCCGCCGCTGATCCTGCGGGTCAATCGCCGCCATGGCAGCCGCGACGCCTACCTCGAGGAGCTGCGCGGCGCCGGCTTTGCCGCCGAACCTTGCACTTTCAGCCGCGACGGCGTGCGCCTGCTGCAGCCCTGCGACGTGACCGCACTGCCCGGCTTCCGGGAAGGCCGCGTCAGCGTGCAGGACGAGGCCGCGCAACTGGCCGCCGACCTGCTCGAGCTGGCCCCGGGTCAACGGGTGCTGGACGCCTGCGCCGCGCCCGGCGGCAAGACCTGCCACCTGCTGGAAGCCGAACCGGCGCTGGCCGAAGTGATCGCGGTGGATCTGGAAGAAAAGCGCCTGACCCGTGTACGCGAGAATCTCCAGCGCCTCGGCCTGGAGGCGCGCCTGATCGCCGCCGACGGCCGTGCGACCAAGGTCTGGTGGGACGGCACGCCATTCCAGCGCATCCTCCTCGATGCACCCTGCTCGGCTACCGGGGTGATCCGCCGTCATCCGGATATCAAGCTGACGCGCAAATCCGAAGACATCCCCGCCCTGGCGCAACTTCAAGGCGAGCTGCTCGATGCGCTGTGGCCGACCCTGGCGCCCGGCGGCATCCTGCTCTACGCCACCTGCTCGGTACTGCCGACGGAAAACAGCGACACCATCGCCGCCTTCCTCGCCCGTACGCCCGACGCGCAGGAGGTCGCCATCGGTGGAGACTTCGGTCTGCAAGCGGCGCACGGTCGCCAGCTGCTGCCACAGCTGGACGGCCATGACGGCTTCTACTATGCCAAGCTGATAAAGAGCGCTGTGCCCAGCCACAGCTAA,MNPRLAAARALTAVLSGKASLGSSLPPQLDKVEHHDRALAQDLAFGAARWQPRLQLLADKLLEKPFKAADKDVEALLLIGLYQLLHSRIPEHAAIGETVGCAGALKKPWAKGLLNAVLRRAQREHEALFAELDRDPVLHTAHPRWLQKQLKSFWPEYWQAICAANNAHPPLILRVNRRHGSRDAYLEELRGAGFAAEPCTFSRDGVRLLQPCDVTALPGFREGRVSVQDEAAQLAADLLELAPGQRVLDACAAPGGKTCHLLEAEPALAEVIAVDLEEKRLTRVRENLQRLGLEARLIAADGRATKVWWDGTPFQRILLDAPCSATGVIRRHPDIKLTRKSEDIPALAQLQGELLDALWPTLAPGGILLYATCSVLPTENSDTIAAFLARTPDAQEVAIGGDFGLQAAHGRQLLPQLDGHDGFYYAKLIKSAVPSHS,TIGRFAM: sun proteinPFAM: Fmu (Sun) domain protein ;,,,,,,,,Unknown,Class 3,GO:0016434 ;,TIGR00563 ,rsmB ,sun protein ,equivalog ,1.2e-139 ,2.1.1.- ,Protein synthesis ,tRNA and rRNA base modification ,PF01189 PF01029 ,Nol1_Nop2_Fmu, NOL1/NOP2/sun family.. NusB, NusB family. The NusB protein is involved in the regulation of rRNA biosynthesis by transcriptional antitermination.. ,COG0144 ,Sun, tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]. ,Translation, ribosomal structure and biogenesis 
NC_009439,Chromosome,Pmen_0054,YP_001185560,146305095,Protein,51494,50550,,,methionyl-tRNA formyltransferase,,,ATGCCTGACTCATTGCGTATCGTCTTTGCCGGCACCCCGGAATTCGCCGCCGAACACCTCAAGGCCCTGCTGGCCAGCCAGCACGAGGTCATCGCCGTCTACACCCAGCCGGATCGTCCGGCCGGCCGTGGCCAGAAGCTGATGCCAAGCCCGGTCAAGCAGCTCGCCGTGGAACACGGCATTCCGGTCCATCAGCCGGCCAGTCTGCGCAATGAAGAGGCTCAGGCCGAGCTGGCGGCGCTCAAGCCAGACCTGATGGTGGTGGTCGCCTACGGCCTGATCCTGCCGCAGGTGGTGCTCGACACGCCGCGCCTGGGCTGCATCAACAGCCACGCCTCGCTGCTGCCACGCTGGCGCGGCGCGGCGCCGATCCAGCGCGCGGTGCAGGCCGGCGACCTCGAGTCCGGCGTCACCGTGATGCAGATGGAAGCGGGCCTGGACACCGGGCCGATGCTGCTCAAGGTCAGCACGCCGATCTCGGCAGAAGACACCGGCGGCAGCCTGCATGACCGTCTCGCCCGGCTCGGCCCGCAGGCGGTGCTGCAGGCCATCGACGGCCTGGCCGCCGGCACCCTGATCGGCGAACTACAGGACGACGCCCAGGCCAACTACGCGCACAAGCTGAACAAGGACGAGGCGCGCCTCGACTTCAGCCGCCCGGCCGTCGAGCTGGAACGCCTGATTCGCGCCTTTCACCCCTGGCCAATCTGCCACACCACGCTGAACGGTGATGCGCTGAAAGTGCATGCCGCCGAACTCGGTGAGGGCAGCGGCGCACCGGGCACCATCCTCGCCGCGGACAAGAACGGCCTGACCGTGGCCTGCGGCGAAGGCGCGCTGCGCCTGACTCGCCTGCAGCTGCCAGGCGGCAAACCGCTGGCCTTCAGCGATCTGTACAACAGCCGCCGCGAGCAGTTCGCGCCCGGCCTGGTACTCGGTCAATGA,MPDSLRIVFAGTPEFAAEHLKALLASQHEVIAVYTQPDRPAGRGQKLMPSPVKQLAVEHGIPVHQPASLRNEEAQAELAALKPDLMVVVAYGLILPQVVLDTPRLGCINSHASLLPRWRGAAPIQRAVQAGDLESGVTVMQMEAGLDTGPMLLKVSTPISAEDTGGSLHDRLARLGPQAVLQAIDGLAAGTLIGELQDDAQANYAHKLNKDEARLDFSRPAVELERLIRAFHPWPICHTTLNGDALKVHAAELGEGSGAPGTILAADKNGLTVACGEGALRLTRLQLPGGKPLAFSDLYNSRREQFAPGLVLGQ,TIGRFAM: methionyl-tRNA formyltransferasePFAM: formyl transferase domain protein ;,,,,,,,,Unknown,Class 3,GO:0006431 ;,TIGR00460 ,fmt ,methionyl-tRNA formyltransferase ,equivalog ,9.2e-125 ,2.1.2.9 ,Protein synthesis ,tRNA aminoacylation ,PF00551 PF02911 ,Formyl_trans_N, Formyl transferase. This family includes the following members. Glycinamide ribonucleotide transformylase catalyses the third step in de novo purine biosynthesis, the transfer of a formyl group to 5'-phosphoribosylglycinamide. Formyltetrahydrofolate deformylase produces formate from formyl- tetrahydrofolate. Methionyl-tRNA formyltransferase transfers a formyl group onto the amino terminus of the acyl moiety of the methionyl aminoacyl-tRNA. Inclusion of the following members is supported by PSI-blast. HOXX_BRAJA (P31907) contains a related domain of unknown function. PRTH_PORGI (P46071) contains a related domain of unknown function. Y09P_MYCTU (Q50721) contains a related domain of unknown function.. Formyl_trans_C, Formyl transferase, C-terminal domain.. ,COG0223 ,Fmt, Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis]. ,Translation, ribosomal structure and biogenesis 
NC_009439,Chromosome,Pmen_0055,YP_001185561,146305096,Protein,52053,51547,,,peptide deformylase,,,ATGGCGATCCTGAATATCCTCGAATTTCCTGATCCACGCCTGCGTACCATCGCCAAACCGGTGGACGTCGTGGACGACTCCATCCGTCAGCTGGTCGACGACATGTTCGAGACCATGTATGACGCACCCGGTATCGGCCTGGCCGCGACGCAGGTCAACGTGCACAAGCGCGTGGTGGTCATGGATTTATCCGAGGACAAGTCCGAACCGCGGGTGTTCATCAATCCCGAGTTCGAATCGCTGACCGATGAGATGGACCAGTATCAGGAAGGCTGCCTGTCGGTGCCCGGCTTCTACGAGAACGTCGATCGCCCGCAGAAGGTCAAGATCAAGGCGCTGGACCGCGATGGCCAGCCCTTCGAACTGATCGCCGAAGGCCTGCTCGCCGTGTGCATCCAGCACGAATGCGATCACCTCAACGGCAAGCTGTTCGTCGACTACCTGTCCAACCTCAAGCGCGACCGGATTAAGAAGAAGCTGGAAAAACAGCATCGCCAACGCGCTTGA,MAILNILEFPDPRLRTIAKPVDVVDDSIRQLVDDMFETMYDAPGIGLAATQVNVHKRVVVMDLSEDKSEPRVFINPEFESLTDEMDQYQEGCLSVPGFYENVDRPQKVKIKALDRDGQPFELIAEGLLAVCIQHECDHLNGKLFVDYLSNLKRDRIKKKLEKQHRQRA,TIGRFAM: peptide deformylasePFAM: formylmethionine deformylase ;,,,,,,3.5.1.88 ;,,Cytoplasmic,Class 3,GO:0042586 ;,TIGR00079 ,pept_deformyl ,peptide deformylase ,equivalog ,4.4e-77 ,3.5.1.88 ,Protein fate ,Protein modification and repair ,PF01327 ,Pep_deformylase, Polypeptide deformylase.. ,COG0242 ,Def, N-formylmethionyl-tRNA deformylase [Translation, ribosomal structure and biogenesis]. ,Translation, ribosomal structure and biogenesis 
NC_009439,Chromosome,Pmen_0056,YP_001185562,146305097,Protein,52207,53244,,,Peptidoglycan-binding LysM,,,ATGAGGAAATCACTACTCGCCCTGCTCTTTGCAGCTGGCGGACTGGCCCTGACCAGCTTGGCTCAGGCCGAAGTGCAACTCAAGGACGGTCACCCGGACCGCTACACCGTGGTCAAGGGCGATACCCTCTGGGACATTTCCGGCAAGTTCCTGCGTCAGCCGTGGAAGTGGCCGGAGATCTGGCACGCCAACCCACAGGTGGCCAACCCGCATCTGATCTACCCTGGGGACACTCTCAATCTGGTCTATGTCGACGGCCAGCCACGCCTGATGCTCAACCGCGGCGAGTCGCGCGGTACCATCAAGCTGTCGCCGCAGGTGCGCAGCACGCCGATGGCCGAGGCGATCCCGACCATTCCGCTGGAGGCGATCAACAGCTTCCTGCTGAGCAACCGCATCGTCGATACCCCGGAAGAGTTCAACGGCAAGCCCTACATCGTCGCCGGCAACGCCGAGCGTGTGGTCAGTGGCGCCGGTGACCGCGTCTACGCTCGCGGCCAGTTCGACGAACAGCATCCGATCTACGGCATCTTCCGTCAGGGCAAGACCTACGTGGATCCGGAAACCAAGGAATTCCTCGGCATCAACGCCGATGACATCGGCTCCGGCGAGATCGTCGCCGAGGAAGGCGATGTCGGGACCCTGCTGCTGAAGCGCTCGACTCAGGAAGTACGCCTGGGTGACCGCCTGTTCCCCACCGAAGAGCGGGCGATCAACTCCACCTTCATGCCCAGCGAGCCGGCGGGCGAGATCAAGGGTCTGATCCTCGACGTGCCGCGTGGTGTGAGCCAGATCGGACAGTTCGACGTGGTCACCTTGAACAAGGGCGCGCGCGACGGCCTGGAAATCGGCAACGTGCTGGCGGTGTACAAGACCGGCGAGACCGTACGCGACCGCGTCACTGGCGAGAGCGTGAAGATTCCGGATGAACGCTCCGGTCTGCTGATGGTGTTCCGCACCTACGACAAGCTCAGCTACGGCCTGGTGCTGCAGGCCAGCCGGCAGCTGGCGGTGATGGACAAGGTCCGCAACCCGTAA,MRKSLLALLFAAGGLALTSLAQAEVQLKDGHPDRYTVVKGDTLWDISGKFLRQPWKWPEIWHANPQVANPHLIYPGDTLNLVYVDGQPRLMLNRGESRGTIKLSPQVRSTPMAEAIPTIPLEAINSFLLSNRIVDTPEEFNGKPYIVAGNAERVVSGAGDRVYARGQFDEQHPIYGIFRQGKTYVDPETKEFLGINADDIGSGEIVAEEGDVGTLLLKRSTQEVRLGDRLFPTEERAINSTFMPSEPAGEIKGLILDVPRGVSQIGQFDVVTLNKGARDGLEIGNVLAVYKTGETVRDRVTGESVKIPDERSGLLMVFRTYDKLSYGLVLQASRQLAVMDKVRNP,PFAM: Peptidoglycan-binding LysM ;,,,,,,,,Unknown,Class 3,,,,,,,,,,,,COG1652 ,XkdP, Uncharacterized protein containing LysM domain [Function unknown]. ,Function unknown 
NC_009439,Chromosome,Pmen_0057,YP_001185563,146305098,Protein,53331,54437,,,DNA protecting protein DprA,,,ATGCCCCTACCTTCCTCGCATTCTCCCGCCGAGCTCGAAGCCCGCCTGCGCCTGCACTTGCTGCCGGAGCTCGGCCCGCGGCGCTTTCGCAAGCTGCTCAGTGCCTTTGACAGCGCTTCGGCCGCACTCAGTGCTCCGGCCAGCGCCTGGCGCTCGCTGGGCCTGCCGGCCGTGTGCGCCGAGCCGCGACGCAGTGCCGAGATCCGGCAACGCGCCGCCGCGGCTATGCACTGGCTCGACCAGACAGATCAGCACCTGCTGATGTGGGATGACCCACGCTATCCGGCCCTGCTCGCCGAGCTGGCGGATGCGCCGCCGCTGCTGTTCGTGGGCGGAGACCCGCTGCTGCTGGAGGCACCGCAACTGGCCATGGTCGGAAGCCGCCGCGCCTCTCGGCCGGGTCTGGACAATGCTCACGCCTTCGCCCGCAGCCTGGCCGCCGGCGGCTTCGTGATCACCAGCGGGTTGGCCCTGGGCATAGATGGCGCCGCGCATCAGGGCGCGCTGGATGGTGGCGGCAAGACCGTGGCGGTGCTGGGTACCGGCCTGGAGTGCCTGTATCCGGCACGGCACAAGCGGCTGGCGGCGCAGATCATCGAGCAGGGCGGTGCTCTGGTCTCCGAACTGCCGTTGGACTGTCCGCCGCAGGCGAGCAACTTCCCGCGACGCAACCGGATCATCAGCGGCCTGTCACTGGGCGTGCTGGTGGTCGAGGCCAGCCCCTCCAGCGGTTCGCTGATCACCGCGCGTCTGGCTGCCGAGCAGGGTCGCGAGGTGTACGCCATTCCCGGCTCCATCCACCATCCAGGGGCGCGCGGCTGTCACCAGCTGATTCGCGACGGCGCGACGCTGGTGGAAAGCATCGAGCATATCCTCGAGGCTCTGCGCGGTTGGCAGACGCCAAGCGGACAGCAAGCCTCGGCTGCGCAGCCCGGCGCCGAGCAGCATCCCCTGCTGACGTTGCTGCACGCCGCGCCACACAGTAGCGAGGCCTTGGCGCACAGCAGTGGCTGGCCACTCGCGCAGGTGCTGGCGGCGCTGACCGAACTGGAGCTGGACGGCCTGGTCTGCTGCGAGGCCGGGCGCTGGCTGGCGCGCGGTCCATAA,MPLPSSHSPAELEARLRLHLLPELGPRRFRKLLSAFDSASAALSAPASAWRSLGLPAVCAEPRRSAEIRQRAAAAMHWLDQTDQHLLMWDDPRYPALLAELADAPPLLFVGGDPLLLEAPQLAMVGSRRASRPGLDNAHAFARSLAAGGFVITSGLALGIDGAAHQGALDGGGKTVAVLGTGLECLYPARHKRLAAQIIEQGGALVSELPLDCPPQASNFPRRNRIISGLSLGVLVVEASPSSGSLITARLAAEQGREVYAIPGSIHHPGARGCHQLIRDGATLVESIEHILEALRGWQTPSGQQASAAQPGAEQHPLLTLLHAAPHSSEALAHSSGWPLAQVLAALTELELDGLVCCEAGRWLARGP,TIGRFAM: DNA protecting protein DprAPFAM: SMF family protein ;,,,,,,,,Cytoplasmic,Class 3,,TIGR00732 ,dprA ,DNA protecting protein DprA ,equivalog ,6.7e-106 , ,Cellular processes ,DNA transformation ,PF02481 ,SMF, SMF family. The SMF family (DNA processing chain A, dprA) are a group of bacterial proteins. In H. pylori, dprA is required for natural chromosomal and plasmid transformation.. ,COG0758 ,Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion]. ,DNA replication, recombination, and repair / Intracellular trafficking and secretion 
NC_009439,Chromosome,Pmen_0058,YP_001185564,146305099,Protein,54504,55061,,,SUA5/yciO/yrdC, N-terminal domain,,,ATGGCCAGCAACTGGCAGGTACAGCAAGCGGCGCGGGTGGTGTGTGAAGGCGGCGTGATCGCCTACCCCACCGAAGCGGTCTGGGGTCTGGGCTGCGACCCCTGGAACGAAGTCGCCGTGGACCGCCTGCTGGCTCTCAAGGAGCGGCCCGTGCACAAGGGCCTGATTCTGGTGGCCGACGACATCGAGCAGTTCGACTTTCTCCTCGATGATCTGCCGGCGATCTGGCAGGAGCGCCTGGCCGCCAGTTGGCCGGGGCCGAACACCTGGCTGGTGCCGCATCAGGACCGTCTGCCCGCATGGATCACCGGCGTGCACGACAGTGTGGCCCTGCGCGTCAGTGATCATCCGCTGGTACGTGCCCTCTGCCGGCTCACCGGACCGCTGATTTCCACCTCGGCCAATCCGGCAGGCCGCCCCGCGGCGCGCTCGCGGCTGCGCGTCGAGCAGTATTTCCCCCGGCAACTGGACAAGGTGCTGGGCGGCGCCCTGGGCGGGCGCAAGAACCCCAGCCTGATTCGCGACCTGCGCACGGGCGATGTGATTCGCTCGTCCTGA,MASNWQVQQAARVVCEGGVIAYPTEAVWGLGCDPWNEVAVDRLLALKERPVHKGLILVADDIEQFDFLLDDLPAIWQERLAASWPGPNTWLVPHQDRLPAWITGVHDSVALRVSDHPLVRALCRLTGPLISTSANPAGRPAARSRLRVEQYFPRQLDKVLGGALGGRKNPSLIRDLRTGDVIRSS,PFAM: SUA5/yciO/yrdC, N-terminal domain ;,,,,,,,,Cytoplasmic,Class 3,,TIGR00057 ,TIGR00057 ,Sua5/YciO/YrdC/YwlC family protein ,hypoth_equivalog ,4e-13 , ,Unknown function ,General ,PF01300 ,Sua5_yciO_yrdC, yrdC domain. This domain has been shown to preferentially bind to dsRNA. The domain is found in SUA5 as well as HypF and YrdC.. ,COG0009 ,SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]. ,Translation, ribosomal structure and biogenesis 
NC_009439,Chromosome,Pmen_0059,YP_001185565,146305100,Protein,56150,55173,,,Alcohol dehydrogenase, zinc-binding domain protein,,,ATGGCCAAGCGTATCCAGTTCAGCCAACACGGCGGCAGCGAGGTGCTGGAGTACCGCGACTATCAGCCGGCGGCCCCCGGCCCGCGCGAAGTGCGGGTGGCCAACCGCGCCATCGGCCTGAATTTCATCGACACCTATTTCCGCAGCGGTCTGTATGCCCCGCCGGCACTGCCCTCCAGCCTGGGTACCGAAGGCGCTGGCGTAGTCGAGGCGGTGGGCAGCGAGGTGCGCAACTTCGCCGTCGGCGACCGCGTGGCCTATGCCACCGGCCCGCTCGGCGCCTACAGCGAGCTGCACGTGCTGCCGGCGGACAAGCTGGTCAGACTGCCGGAGGCCATCAGCTTCGAGCAGGCCGCGGCGGTGATGCTCAAGGGCCTGACCGTGCAGTACCTGCTGCGCCAGACCTATGAGCTCAAGGGCGGCGAGACCATTTTGTTCCATGCCGCAGCGGGCGGCGTCGGCTCCTTCGCCTGCCAGTGGGCGCGGGCGTTGGGGGTCAATCTGATCGGCACGGTCAGTTCGGCCGAGAAGGCGGCGCGGGCGAAAGAGCAGGGCGCCTGGGCGACCATCGACTACAGCCATGAGAACGTCGTGCAGCGCGTGCTGGAGCTGACCGACGGCAAGAAGTGCCCGGTGGTCTACGACGGCGTCGGCAAGGACACCTGGGAAACCTCGCTGGACTGCGTGGCGCCGCGCGGCCTGCTGGTCAGCTTCGGCAACGCCTCCGGTGCGGTCACCGGGGTCAACCTGGGCGTCCTGGCGCAGAAGGGCTCGCTGTACGTCACCCGGCCGACCCTGGCCGGCTACGCCGATACCCCCGAGCGTCTGCAGACCATGGCCGACGAGCTGTTCGGCATGATCGCCGGCGGCCAGCTGCAGGTGGAGATCAGCAACCGTTATGCGTTGAAGGACGCCGCCGCTGCGCAGGACGCGCTGAGCGCCCGGCAGACTACCGGCTCGACCATTCTGCTGCCGTGA,MAKRIQFSQHGGSEVLEYRDYQPAAPGPREVRVANRAIGLNFIDTYFRSGLYAPPALPSSLGTEGAGVVEAVGSEVRNFAVGDRVAYATGPLGAYSELHVLPADKLVRLPEAISFEQAAAVMLKGLTVQYLLRQTYELKGGETILFHAAAGGVGSFACQWARALGVNLIGTVSSAEKAARAKEQGAWATIDYSHENVVQRVLELTDGKKCPVVYDGVGKDTWETSLDCVAPRGLLVSFGNASGAVTGVNLGVLAQKGSLYVTRPTLAGYADTPERLQTMADELFGMIAGGQLQVEISNRYALKDAAAAQDALSARQTTGSTILLP,PFAM: Alcohol dehydrogenase, zinc-binding domain protein ;,,,,,,,,Unknown,Class 3,,TIGR01751 ,crot-CoA-red ,crotonyl-CoA reductase ,No data ,7.9e-09 , ,No data ,No data ,PF00107 PF08240 ,ADH_zinc_N, Zinc-binding dehydrogenase.. ADH_N, Alcohol dehydrogenase GroES-like domain. This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure.. ,COG0604 ,Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]. ,Energy production and conversion / General function prediction only 
NC_009439,Chromosome,Pmen_0060,YP_001185566,146305101,Protein,56295,57209,,,Coproporphyrinogen oxidase,,,GTGACTGACCGTACCGAGGCCGTGAAGGCCTATCTGCTCGACCTGCAAGATCGCATCTGCGCCGCCCTCGAGGCCGAGGACGGCCAGGCCCTGTTCCGTGAGGACGCCTGGCAGCGTCCGGCTGGCGGCGGCGGCCGCACGCGGGTGATCGAGAACGGCGCGCTGATCGAAAAGGGCGGGGTCAACTTCTCCCACGTGTTCGGCGACAGCCTGCCGCCCTCGGCCAGCGCCCATCGCCCCGAACTTGCCGGCCGCGGCTTTCAGGCCCTCGGCGTGTCGCTGGTGATCCATCCGGAAAACCCCTACGTGCCCACCTCGCACGCCAACGTGCGCTTCTTCAGCGCGGAGAAGGAAGGCGAGGAGCCAGTGTGGTGGTTCGGCGGCGGTTTCGACCTGACCCCCTACTACGCCAACGAGGAGGATTGCCGCTACTGGCATCAGGTGGCCTTCGATGCCTGCGCGCCCTTTGGCGCCGAGGTCTATCCCAGGTTCAAGGCCTGGTGCGACCGCTACTTCCACCTCAAGCACCGCGGCGAGCCGCGCGGCATTGGCGGGTTGTTCTTCGACGATCTCAACGAATGGGACTTCGACACCTGCTTCGCCTTCATGCGCGCCATCGGCGACGCCTACATCCAGGCCTACCTGCCGATCGTCCAGCGCCGCAAGCTCACCCCCTTCGGTGAGCGCGAGCGCGAGTTCCAGGCGTTCCGCCGCGGTCGCTATGTCGAGTTCAACCTGGTGTTCGACCGCGGCACCCTGTTCGGCCTGCAGTCCGGCGGGCGTACCGAGTCGATTCTGATGTCGCTGCCGCCGATGGTACGTTGGGGCTACGACTGGAAGCCCGAACCGGGCAGCGAGGAAGCGCGCCTGACCGAGTATTTCCTCACCGATCGTGACTGGCTTTCGGGGGCCTGA,MTDRTEAVKAYLLDLQDRICAALEAEDGQALFREDAWQRPAGGGGRTRVIENGALIEKGGVNFSHVFGDSLPPSASAHRPELAGRGFQALGVSLVIHPENPYVPTSHANVRFFSAEKEGEEPVWWFGGGFDLTPYYANEEDCRYWHQVAFDACAPFGAEVYPRFKAWCDRYFHLKHRGEPRGIGGLFFDDLNEWDFDTCFAFMRAIGDAYIQAYLPIVQRRKLTPFGEREREFQAFRRGRYVEFNLVFDRGTLFGLQSGGRTESILMSLPPMVRWGYDWKPEPGSEEARLTEYFLTDRDWLSGA,PFAM: coproporphyrinogen III oxidase ;,,,,,,1.3.3.3 ;,,Cytoplasmic,Class 3,,,,,,,,,,PF01218 ,Coprogen_oxidas, Coproporphyrinogen III oxidase.. ,COG0408 ,HemF, Coproporphyrinogen III oxidase [Coenzyme metabolism]. ,Coenzyme metabolism 
NC_009439,Chromosome,Pmen_0061,YP_001185567,146305102,Protein,57317,58138,,,shikimate 5-dehydrogenase,,,ATGGACCGCTACTGCGTCTTCGGCAACCCCATCGGCCACAGCAAATCGCCGCTGATCCACCGTCTGTTCGCCGAGCAGACCGGCCAGGTGCTGACCTACGAAGCGCGGCTGGCGCCGCTGGACGATTTCATCGGTGACGCGCGCGCCTTCTTCGCCGAGGGGCTGGGCGCCAACGTCACCGTACCGTTCAAGGAAGAGGCCTTTCGCCTGGCCGACGAGCTGAGCGAGCGCGCCCGCCGCGCGGGCGCGGTGAACACCCTGAAGAAGCTGGAAGGTGGCCGCCTGCTCGGTGACAACACCGACGGTGCCGGATTGACCCGCGACCTGCAGGACAATGCCGGCTTCGCCCTGACCGGCAAGCGCATCCTCGTGCTCGGGGCCGGCGGCGCCGTGCGCGGCGTGCTCGAACCCTTCCTGGCGCAGAAGCCGGCCGTGCTGGTGATCGCCAACCGCACCGTGGCCAAGGCCGAGCAGCTGGTGCGCGAATTCGCCGACCTCGGCCCGCTGGTCGCTGCCGGTTTCGACTGGCTCGACGCGCCGGTGGACCTGATCGTCAACGGTACCTCGGCCAGCCTCGGTGGCGAGCTGCCGCCGATCGCACCGAGCCTGATCCAGCCGGGCCATACGCTTTGCTACGACATGATGTATGGCAAGGAGCCCACCGCCTTCAACCGCTGGGCCTTTGATCAGGGCGCGGCGCGCTGCCTGGACGGCCTCGGCATGCTGGTCGAGCAGGCCGCCGAAGCATTCGAGCTATGGCGCGGCGTGCGCCCGAACACCGCGCCGGTGCTGGCCGAATTGCGCCGCCAGCTGGCGGGCTGA,MDRYCVFGNPIGHSKSPLIHRLFAEQTGQVLTYEARLAPLDDFIGDARAFFAEGLGANVTVPFKEEAFRLADELSERARRAGAVNTLKKLEGGRLLGDNTDGAGLTRDLQDNAGFALTGKRILVLGAGGAVRGVLEPFLAQKPAVLVIANRTVAKAEQLVREFADLGPLVAAGFDWLDAPVDLIVNGTSASLGGELPPIAPSLIQPGHTLCYDMMYGKEPTAFNRWAFDQGAARCLDGLGMLVEQAAEAFELWRGVRPNTAPVLAELRRQLAG,TIGRFAM: shikimate 5-dehydrogenasePFAM: Shikimate/quinate 5-dehydrogenase ;,,,,,,,,Cytoplasmic,Class 3,GO:0009423 ;,TIGR00507 ,aroE ,shikimate 5-dehydrogenase ,equivalog_domain ,3.2e-99 ,1.1.1.25 ,Amino acid biosynthesis ,Aromatic amino acid family ,PF08501 PF01488 ,Shikimate_dh_N, Shikimate dehydrogenase substrate binding domain. This domain is the substrate binding domain of shikimate dehydrogenase.. Shikimate_DH, Shikimate / quinate 5-dehydrogenase. This family contains both shikimate and quinate dehydrogenases. Shikimate 5-dehydrogenase catalyses the conversion of shikimate to 5-dehydroshikimate. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites 3-dehydroquinate and dehydroshikimate.. ,COG0169 ,AroE, Shikimate 5-dehydrogenase [Amino acid transport and metabolism]. ,Amino acid transport and metabolism 
NC_009439,Chromosome,Pmen_0062,YP_001185568,146305103,Protein,59982,58342,,,sulphate transporter,,,ATGCGATCCGGCGCTACGCTAGGCTCCTGCGAGCTGCCCGAATCGAATCCAACCTGCCTGGCCCCAACGATGCCGCTACCCGACCTGCAGACTCTTTTGCCCTTCCTGCGCTGGCTGCCCGGCACCAGCCGCAAGACCCTCGGCAACGATCTGCTGGTCGGCCTCACCGGCGCGGTGCTGGCCCTGCCGCAGTCGCTGGCCTATGCGCTGATCGCCGGCCTGCCGGCCGAGTACGGCCTGTACGCAGCCATAGTGCCGGTGATCGTCGCCTGCCTGTGGGGCTCGTCCTGGCACCTGATCTGCGGGCCGACGGCGGCCATCTCCATCGTCCTGTTCACCAGCGTCAGCCCGCTGGCCAAAGCCGGCAGCGAGCAGTTCATCGCCCTGGTGCTGCTGCTGACCTTCCTCGCCGGGCTGTTCCAGTGGCTGCTCGGCCTGCTGCGCTTCGGCGCCCTGGTCAACTTCGTCTCGCAATCGGTGGTGCTCGGCTTCACCCTGGGCGCGGCGCTGGTCATCGCCATCGGCCAGATTCCCAATCTGCTGCGCGTGGAGATCGTCAGCCAGGCCACCGCCCTGGCCAGCCTGCTGCAGATCGGTCAGCACCTGAACGACGTGCATTGGCCAAGCCTGGCCCTGGCCGCCTTCACCCTGCTGCTCTGCCTGGCGGTACGACGCCTGTGGCCGAAGGCGCCGGCGTTGCTGCTCGGCCTGGTCGCCGGCAGCGCGCTGGTGTGGCTGCTGCCGGAACGCCTGGTCGGCGGCATCGCCCTGGTCAGCGCCTTCGAAGGCGGCCTGCCGCCCTTCACGCCGCTGCAGTTCGACCTCAACAGCCTGCTGCAGCTGCTGCCGGCGGCGGTGGCCTGCGGCATGCTCGGGCTGGTCACCAGCCTGTCCATCGCCCGCGCGCTGGCGGTCAAATCGCACCAGTTCCTCGATGCCAATCAGGAAGTGCGCGCCCAGGGGCTGTCGAACATGCTCGGGCCCTGGTTCGCCGGTTCGCTGTCGGCCGGCTCCTTCACCCGCTCGGCGCTCAACCTGCAGGCCGGCGCGCGTACGCCGCTGGCCGGGGTGTTCTCGGCGTTGCTGGTGGCGCTGTTCGCCCTGTTCGGCGCAGCGCTGCTGGCGCATATTCCGCTGCCGGTGATGGCCGCCGGCATCCTGCTGATCTGCTGGGGCCTGGTCGATCTGGCGGCGATCCGCGCCCTGCGCCGCGTCAGCCGCGCCGAGTTCGCGGTGATGCTGCTGACGCTGCTGGCCACCCTGCTGCTGGAACTGCAGACGGCAATCTACGCCGGGGTGCTGGCCTCGCTGTTCTTCTACCTCAAGCGCACCTCGCAACCGCGCGTGCGCCTGTGGCAGGACGGCGACGACGAGGTGCTGCGCATCGAGGGCTCGATCTTCTTCGGCGCCTGCCACTACATCCAGCAGCTGCTGCAGCGCAGCCGCGGCCAGCGCCTGGTGATCGACGCGCGGCATATCAACTTCATCGACTACGCCGGGGTGGAGATGCTGCACCAGGAGGCACGCCGCCTGCTGGCCGGACAGCGCAGCCTGGTGTTGCGCCAGGCCCGGCCGCAGGTGGTGGAGGAGATTCTCAAGCTCGAAGGCGCTGAACGCTGTCCGGTGCAGTTCGAGGATTGA,MRSGATLGSCELPESNPTCLAPTMPLPDLQTLLPFLRWLPGTSRKTLGNDLLVGLTGAVLALPQSLAYALIAGLPAEYGLYAAIVPVIVACLWGSSWHLICGPTAAISIVLFTSVSPLAKAGSEQFIALVLLLTFLAGLFQWLLGLLRFGALVNFVSQSVVLGFTLGAALVIAIGQIPNLLRVEIVSQATALASLLQIGQHLNDVHWPSLALAAFTLLLCLAVRRLWPKAPALLLGLVAGSALVWLLPERLVGGIALVSAFEGGLPPFTPLQFDLNSLLQLLPAAVACGMLGLVTSLSIARALAVKSHQFLDANQEVRAQGLSNMLGPWFAGSLSAGSFTRSALNLQAGARTPLAGVFSALLVALFALFGAALLAHIPLPVMAAGILLICWGLVDLAAIRALRRVSRAEFAVMLLTLLATLLLELQTAIYAGVLASLFFYLKRTSQPRVRLWQDGDDEVLRIEGSIFFGACHYIQQLLQRSRGQRLVIDARHINFIDYAGVEMLHQEARRLLAGQRSLVLRQARPQVVEEILKLEGAERCPVQFED,PFAM: Sulfate transporter/antisigma-factor antagonist STAS ;,,,,,,,,Cytoplasmic Membrane,Class 3,GO:0016020 ;,TIGR00815 ,sulP ,sulfate permease ,subfamily ,4.7e-92 , ,Transport and binding proteins ,Anions ,PF00916 PF01740 ,Sulfate_transp, Sulfate transporter family. Mutations in human diastrophic dysplasia protein lead to several diseases.. STAS, STAS domain. The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C terminal region of Sulphate transporters and bacterial antisigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.. ,COG0659 ,SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]. ,Inorganic ion transport and metabolism 
NC_009439,Chromosome,Pmen_0063,YP_001185569,146305104,Protein,60949,60029,,,Substrate-binding region of ABC-type glycine betaine transport system,,,ATGAACCGAATCAACGCGCTGTTGCTGGCCGGAGCGCTGTCCGCCAGCGCCAACGTCTGGGCCGAGGACGCGGCCTGCGCCACGGTCAAGCTGGGCGATCCGGGCTGGAGCGACATCGCCGTGACCAACGGCATCGCCAGCTTCCTGCTCGAAGGCCTCGGCTACCAGACGCAGAGCCAGACCCTGGCGGTGCCGATCATCTACGCCGGGCTGCAGAAGGGTCAGCTCGACGTGTTCCTCGGCAACTGGATGCCGGCGCAGCAGAGCAACTACGACAAGTTCGTCGCCAGCGGCGAGGTGGACCAACTGGCGCAGAACCTCGACGGCACCGAGTACACCCTGGCGGTGCCGACCTATGCCTTTGATGCCGGTGTGAAGACCTTCGCCGACCTCGACAAGCACGCCGACAAGTTCGGCAAAAAGCTCTACGGCATCGCCTCCGGCTCGCCGGCCAACGAATCGATCAAGCAGATGATCGCCGCCGACGAGTTCGGCCTGGGCGACTGGCAACTGGTGGAGTCCAGCGAGCAGGCGATGCTGGTGCAGGTCGGCCGCGCGGTCAAACGCGAGCAGTTCGTGGTGTTCCTCGGCTGGACCCCGCACCCGATGAACGTGCAGTACGACATGAAATACCTGCGCGGCGGCGAGAAGTATTTCGGCGACAGCGGCCAGGTCAACACCCTGGCGCGCAAGGGCTATGCCCAGCAGTGCCCCAATGCCGGCAAGTTGCTGAGCAACCTCAAATTCACCCAGGAGATGGAGAACAGCATCATGGATCGGGTGCTCAGCAAGCAGGCCAGCAACGCCCAGGCGATCAAGGACTGGCTGCAGGCCAACCCGCAGGTGCTCGACGCCTGGCTGGACGGGGTCACCACCCGCGACGGCGGCGACGGCCTGGCCGCGGTCAAGGCGCGGCTTTGA,MNRINALLLAGALSASANVWAEDAACATVKLGDPGWSDIAVTNGIASFLLEGLGYQTQSQTLAVPIIYAGLQKGQLDVFLGNWMPAQQSNYDKFVASGEVDQLAQNLDGTEYTLAVPTYAFDAGVKTFADLDKHADKFGKKLYGIASGSPANESIKQMIAADEFGLGDWQLVESSEQAMLVQVGRAVKREQFVVFLGWTPHPMNVQYDMKYLRGGEKYFGDSGQVNTLARKGYAQQCPNAGKLLSNLKFTQEMENSIMDRVLSKQASNAQAIKDWLQANPQVLDAWLDGVTTRDGGDGLAAVKARL,PFAM: Substrate-binding region of ABC-type glycine betaine transport system ;,,,,,,,,Unknown,Class 3,,,,,,,,,,PF04069 ,OpuAC, Substrate binding domain of ABC-type glycine betaine transport system. Part of a high affinity multicomponent binding-protein-dependent transport system involved in bacterial osmoregulation. This domain is often fused to the permease component of the transporter complex. Family members are often integral membrane proteins or predicted to be attached to the membrane by a lipid anchor. Glycine betaine is involved in protection from high osmolarity environments for example in Bacillus subtilis. The family member OpuBC is closely related, and involved in choline transport. Choline is necessary for the biosynthesis of glycine betaine. L-carnitine is important for osmoregulation in Listeria monocytogenes. Family also contains proteins binding l-proline (ProX), histidine (HisX) and taurine (TauA).. ,COG2113 ,ProX, ABC-type proline/glycine betaine transport systems, periplasmic components [Amino acid transport and metabolism]. ,Amino acid transport and metabolism 
NC_009439,Chromosome,Pmen_0064,YP_001185570,146305105,Protein,62501,60993,,,sulfatase,,,ATGAAACGCCCGAACATCCTCTTCATCATGGCCGACCAGATGGCCGCACCGATCCTGCCGCTGCACGATGCCGCCTCGCCGGTGCAGATGCCCAACCTGATGAAACTGGCCGAACGGGCCGTGGTGTTCGACTCGGCCTACTGCAACAGCCCGCTGTGCGCGCCGTCGCGCTTCACCCTGGTCAGCGGCCGGCTGCCGTCGCAGATCGGCGCCTATGACAACGCCGCCGACTTTCCCGCCGACGTGCCCACCTACGCCCACTACCTGCGCCGCCTCGGCTACCGCACCGCGCTGTCGGGCAAGATGCACTTCTGCGGCCCGGACCAGCTGCACGGCTACGAGGAACGCCTGACCAGCGACATCTACCCGGCCGACTACGGCTGGGCGGTGAACTGGGACGAACCGGACGTGCGCGCCAGCTGGTACCACAACATGTCCTCGGTGCTGCAGGCCGGCCCCTGCGTGCGCAGCAACCAGCTGGATTTCGACGAGGAGGTGGTGTTCAAGGCCCGCCAGTACCTCTACGACCACGTGCGTCTGACGCCGGAGCAGCCGTTCTGCCTGACCGTGTCGATGACCCACCCCCATGACCCCTACACCATCCCGCGCGAATACTGGGAGCGCTACGAAGGCGTGGACATTCCCATGCCGCGCCAGCACATCGAGCAGGCCGAGCAGGACCCGCACTCGCAGCGCTTGCTCAAGGTCATCGACCTGTGGGACAAGCCGCTGCCGGCAGACAAGATCCGCGACGCCCGCCGCGCCTACTTCGGTGCCTGCAGCTATATCGACGACAACATCGGCAAGCTGCTGAAGACCCTGGAGGAATGCGGCCTGGCCGAGGACACCCTGATCGTCTTCTCCGGCGACCACGGCGACATGCTTGGCGAGCGCGGCCTCTGGTACAAGATGCACTGGTTCGAGATGGCCGCCCGTGTGCCGCTGCTGGTGCATGCGCCGCAGCGCTTCGCCGCGCACCGGGTCAGCCAGTCGGTCTCCACCCTCGATCTGCTGCCCACACTGGTGGAACTGGCCGGCGGCCGGGTCGAGGAGGGCCTGGCGCTGGAGGGCCGCTCGCTGCTGGCGCATCTGACTGGCGAAGGCGGACATGACGAGGTAATCGGCGAATATATGGCCGAAGGCACCACCAGCCCGCTGATGATGATCCGCCGCGGGCCGTGGAAATTCGTCTACTCCGAGCAGGATCCGCTGCTGCTGTTCCATCTCCAGCAGGACCCGCAGGAGCGCGAGAATCTGGCCGGCTCGGCGGACCACCAGGGCGTGCTGGCCGAGTTTCTCGCCGAGGCGCGGGCGCGCTGGGACATCCCCGCGATCCACGCCGCCACCCTGGCCAGCCAGCGCCGTCGGCGCCTGGTGGCAGAGGCCCTGAGCCAGGGCAAGCTGACCAGCTGGGACCATCAGCCCTGGGTCGACGCCAGCCAGCAGTACATGCGCAACCATATCGATCTCGACGACCTGGAACGTCGCGCCCGCTATCCACAGGTTTGA,MKRPNILFIMADQMAAPILPLHDAASPVQMPNLMKLAERAVVFDSAYCNSPLCAPSRFTLVSGRLPSQIGAYDNAADFPADVPTYAHYLRRLGYRTALSGKMHFCGPDQLHGYEERLTSDIYPADYGWAVNWDEPDVRASWYHNMSSVLQAGPCVRSNQLDFDEEVVFKARQYLYDHVRLTPEQPFCLTVSMTHPHDPYTIPREYWERYEGVDIPMPRQHIEQAEQDPHSQRLLKVIDLWDKPLPADKIRDARRAYFGACSYIDDNIGKLLKTLEECGLAEDTLIVFSGDHGDMLGERGLWYKMHWFEMAARVPLLVHAPQRFAAHRVSQSVSTLDLLPTLVELAGGRVEEGLALEGRSLLAHLTGEGGHDEVIGEYMAEGTTSPLMMIRRGPWKFVYSEQDPLLLFHLQQDPQERENLAGSADHQGVLAEFLAEARARWDIPAIHAATLASQRRRRLVAEALSQGKLTSWDHQPWVDASQQYMRNHIDLDDLERRARYPQV,PFAM: sulfatase ;,,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,PF00884 ,Sulfatase, Sulfatase.. ,COG3119 ,AslA, Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism]. ,Inorganic ion transport and metabolism 
NC_009439,Chromosome,Pmen_0065,YP_001185571,146305106,Protein,62616,63569,,,transcriptional regulator, LysR family,,,ATGCGTAAAGTGCTCGATGAGATTTCCCTGGACAGCCTGCGGGTGTTCGAATCGGCCGCCCGCCTGCTGAGCTTCACCGCGGCGGCCAACGAGCAGGGCAGCAGCCAGCCGGCCATCAGCCAGCAGATCAAACGCCTGGAACAGCAGCTGGCGGTACGCCTGTTCGACCGCGTGCATCGCGGATTGGTGCTGACGGAAGCGGGCGAACTGTTGCTGCGTTACGTGCAGGAGGGCCTGCACAGCCTGGACAGCGGCCTGCAGGCGGTGGTCGCGCGGCAGCAGCATGAGGTGCTGCAGGTGGCCACCGATTTCGCCTTCGCCGCCTACTGGCTGATGCCGCGTCTGCAGCGCTTCCATCAGCTGCACCCGGAGGTGGACGTGAGCCTGGTGACCACCGAGCGCGACTTGGGCGGCAACCTGCCGGGCGAGATCGACGTGGCCATCAGTTTCGGCGACGGTCGCTGCAAGCACGGCGAGAGCCTGCTGCTGTTCGGCGAGGAAGTGTTCCCGGTGTGCAGTCCGCACCTGCTGCACGGCCGCGAGCCGGTGGACTCGGCGGCATTGTTGGCGCGCCTGCCACTGCTGCATCTGCGCCCGGAGGCGCGCGCCAACTGGTTTGCCTGGGATGGCGTATTCCGCGCGCTGGGCATTGCCGAGCCCCCTTCTGCCGGCGCCCTGCGCTTCGACAACTACACCTTGCTGATCCAGGCCGCCATCGCCGGCCAGGGCGTGGCCATCGGCTGGCGCTACCTGGTGGACGAGCTGTTGGCCCAGGGGCTGCTGGTGCGCATGCTGGACACCTCGATCCGCTCGGCCTATGGCTATTACGTGGTGATGCCCGAGCGCAAGCGGCGTGCGCGGCTGGTGCGCTGCTTCGTCGACTGGCTGCAGGACGAGCTGGCCAGCCTGCAGCGGCAGCCGCCGCAAGGTGGTTGGGCGGGTGTCGCGATCTAG,MRKVLDEISLDSLRVFESAARLLSFTAAANEQGSSQPAISQQIKRLEQQLAVRLFDRVHRGLVLTEAGELLLRYVQEGLHSLDSGLQAVVARQQHEVLQVATDFAFAAYWLMPRLQRFHQLHPEVDVSLVTTERDLGGNLPGEIDVAISFGDGRCKHGESLLLFGEEVFPVCSPHLLHGREPVDSAALLARLPLLHLRPEARANWFAWDGVFRALGIAEPPSAGALRFDNYTLLIQAAIAGQGVAIGWRYLVDELLAQGLLVRMLDTSIRSAYGYYVVMPERKRRARLVRCFVDWLQDELASLQRQPPQGGWAGVAI,PFAM: regulatory protein, LysR ;,,,,,,,,Cytoplasmic,Class 3,,TIGR02036 ,dsdC ,D-serine deaminase transcriptional activator ,equivalog ,5.8e-17 , ,Regulatory functions ,DNA interactions ,PF03466 PF00126 ,LysR_substrate, LysR substrate binding domain. The structure of this domain is known and is similar to the periplasmic binding proteins.. HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family.. ,COG0583 ,LysR, Transcriptional regulator [Transcription]. ,Transcription 
NC_009439,Chromosome,Pmen_0066,YP_001185572,146305107,Protein,63685,64587,,,Serine-type D-Ala-D-Ala carboxypeptidase,,,GTGAAACTCCGATATTCGATTTTGGGCCTGCTGCTGAGCGCCGGCCTTGTTGTCTCGAACCTTCAGGCCGCGCCGGCCCAGCCGCAACAGGAACTTGCTGCGGGCAGCGCATTGCTGATCGACCTGAAGACCGGAAAGGAACTCTATTCCAGCAATCCCGACCTGCGTCTGCCGGTGGCTTCGGTGACCAAGCTGATGACCGCCATGGTGGTGCTCGATGCCAAGCTGCCGCTGGACGAGGTGCTGCCCATCACCATCCGCGACACCAAGGAGATGCAGGGCGTCTACTCGCGCGTACGCATCGGCAGCGAGATCAGCCGGCGCGACATGCTGCATCTGGCCCTGATGTCCTCGGAGAACCGCGCCGCCGCCAGCCTGGCCCACCACTATCCCGGTGGCCACGTGGCGTTCGTCGCGGCGATGAACGCCAAGGCCAAGGCGCTGGGCATGCACAACAGCCATTTCGTCGAGCCCACCGGCATGTCCGAGCGCAACGTCGCCACCGCCCGCGACCTGGCGCTGATGATCAAGGCCACCCAGCAGTACCCGCTGATCGGCCAGTTCAGCACCGACTCCGAGGCGACCGTCACCTTCCGCAAGCCGACCTATACCCTGGGCTTTCGCAACACCAACGCACTGGTGCGCAAGCCCGACTGGGACATCGGCATGAGCAAGACCGGCTTTACCAACGCCGCGGGGCGCTGCCTGGTGATGCTCACCTCGATGAACCAGCGTTCGGTGGCCTTCGTCGTGCTCGGTGCGTTCGGCAAGTACACCCATATGGCCGACGCCAACCGCCTCAAGCGCTGGATGGAGACCGGCAAGGTGACGCCGGTGCCGGCCGCCGCGCTCAGCTACAAGCAGCAGAAGCTGACCGAATGGAGCATGCAGGCCGCGCAGTGA,MKLRYSILGLLLSAGLVVSNLQAAPAQPQQELAAGSALLIDLKTGKELYSSNPDLRLPVASVTKLMTAMVVLDAKLPLDEVLPITIRDTKEMQGVYSRVRIGSEISRRDMLHLALMSSENRAAASLAHHYPGGHVAFVAAMNAKAKALGMHNSHFVEPTGMSERNVATARDLALMIKATQQYPLIGQFSTDSEATVTFRKPTYTLGFRNTNALVRKPDWDIGMSKTGFTNAAGRCLVMLTSMNQRSVAFVVLGAFGKYTHMADANRLKRWMETGKVTPVPAAALSYKQQKLTEWSMQAAQ,PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 ;,,,,,,3.4.16.4 ;,,Periplasmic,Class 3,,,,,,,,,,PF00768 ,Peptidase_S11, D-alanyl-D-alanine carboxypeptidase.. ,COG1686 ,DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]. ,Cell envelope biogenesis, outer membrane 
NC_009439,Chromosome,Pmen_0067,YP_001185573,146305108,Protein,65592,64684,,,transcriptional regulator, LysR family,,,ATGAAGATCAGCCTGGAAGAAATGCTCGCGTTCGTTTGCGTGGTCGACAGCGGCTCCATCAGCGCGGCGGCCGAGCAACTGGAGCAGACCGCCTCCGGCGTCAGCCGCGCCCTCGGTCGTCTCGAGGAGAAGCTCGCGGTGACGCTGTTGCGCCGCACCACCCGGCGCCTGGAGCTGACCGAGGAGGGCGAGGTGTTTCTCGTCCAGGCGCGGCGCATTCTCGACAGCGTCGAGGAGGCCGAGGAGCAGATGGCCGTGCGCCGCCAGGCGCCGGCCGGACGCCTGCGCATCAACACCGCCTCGCCCTTCATGTTGCATGTGATAGTCCCGCTGATTGGCGATTTTCGCGCTCTTTATCCGCAGATCGAGCTGGAGCTGAACAGCGATGACCGCATCATCGATCTGCTGGAACGGCGTACCGACCTGGCCATCCGTATCGGCCATCTGCCCGACTCGAGCCTGCATGCACGCCCGCTATGCCATAGCCGCCGTCGCGTGCTGGCCAGCCCGGATTACCTGGCCAGGCATGGCCAGCCGATGCGCACCGAGGAGCTGGCCGGGCACAGCCTGATCGGCTTCACCGAACCGGACAGCCTCAATGAATGGCCGCTGCGCCATGCCCTCGGCGAGCGCTGGCGCATTACGCCCAGCCTGCACGTTTCCAGTGGCGACACCGTGCGGGAGCTGGCTCTGGCGGGTCAGGGCCTGGTCTGTCTGTCGGACTTCATGACCGACGTCGACCGCGCCAGCGGCCGTCTGGTGGAGGTGCTGGCCGAGCAGCGCGTGGAGGTGCGCCAGCCCATCAACGCGGTGTACTACCGCAATACGGCGCTGGCCTCGCGCATCACCTGTTTTCTCGATTTTCTCAGCGAGCGACTAGGCTCGCCCGGGCTGACGCCCCACGACTGA,MKISLEEMLAFVCVVDSGSISAAAEQLEQTASGVSRALGRLEEKLAVTLLRRTTRRLELTEEGEVFLVQARRILDSVEEAEEQMAVRRQAPAGRLRINTASPFMLHVIVPLIGDFRALYPQIELELNSDDRIIDLLERRTDLAIRIGHLPDSSLHARPLCHSRRRVLASPDYLARHGQPMRTEELAGHSLIGFTEPDSLNEWPLRHALGERWRITPSLHVSSGDTVRELALAGQGLVCLSDFMTDVDRASGRLVEVLAEQRVEVRQPINAVYYRNTALASRITCFLDFLSERLGSPGLTPHD,PFAM: regulatory protein, LysR ;,,,,,,,,Cytoplasmic,Class 3,,TIGR02036 ,dsdC ,D-serine deaminase transcriptional activator ,equivalog ,6.9e-07 , ,Regulatory functions ,DNA interactions ,PF03466 PF00126 ,LysR_substrate, LysR substrate binding domain. The structure of this domain is known and is similar to the periplasmic binding proteins.. HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family.. ,COG0583 ,LysR, Transcriptional regulator [Transcription]. ,Transcription 
NC_009439,Chromosome,Pmen_0068,YP_001185574,146305109,Protein,65802,66605,,,aldo/keto reductase,,,ATGAAATTCATCCCTGCCTTCGGTCTTGGCACCTTTCGCCTCAAGGATCAGGTCGCCATCGACTCGGTGCGCACCGGTCTGGAGCTGGGCTACCGGCATATCGACACGGCGCAGATCTACGGCAACGAGGCCGAGGTCGGCCAGGCCATCGCCGCCAGCAGCGTGGCGCGCGACGAGCTGTTCGTCACCACCAAGATCTGGACCGAGAACCTCGGCCCTGGCCGGGTGATCGCCAGCCTGCAGGAGAGCCTGCAGCGCCTGGGCCTGGAGCGGGTCGACCTGTGCCTGATCCACTGGCCGTCGCCGGGCGACGAGATCCCCGTGGCGCAGTACCTGGGCGAGCTGCTGGAGGCCAAGCGCCAGGGACTGACCGCGGCCATCGGCGTGTCCAACTTCACCATCGCCCATCTGCAGCAGGCTATCGAGGCAGTGGGTGCCGACGAGATCGCCACCAACCAGGTCGAGATCCACCCGCTGCTGCAGAATCGCAAGCTGGTCGACTTCACCCGCCAGCAGGGTATCCACCTCACCGCCTACATGCCGCTGGCCTACGGCAAGGTGCTGGCCGAGCCGGAGATCCAGCGCATCGCCGCCGCCCATGGCGTCAGCCCGGCGCAGGTCGCCCTGGCCTGGTCGCTGCAACAGGGTTATGCGGTGATCCCCTCCTCAACCAAGCGCGAGAACCTGGCCGCCAATCTGGCAGCCGCCGAGTTGCGCCTCAGCACCGAAGACATGGCCGCCATCGCTACCCTGGAGCGTGGCGAGCGGGTGGCCAACCCGGGGTTTGCGCCGCGCTGGGATTGA,MKFIPAFGLGTFRLKDQVAIDSVRTGLELGYRHIDTAQIYGNEAEVGQAIAASSVARDELFVTTKIWTENLGPGRVIASLQESLQRLGLERVDLCLIHWPSPGDEIPVAQYLGELLEAKRQGLTAAIGVSNFTIAHLQQAIEAVGADEIATNQVEIHPLLQNRKLVDFTRQQGIHLTAYMPLAYGKVLAEPEIQRIAAAHGVSPAQVALAWSLQQGYAVIPSSTKRENLAANLAAAELRLSTEDMAAIATLERGERVANPGFAPRWD,PFAM: aldo/keto reductase ;,,,,,,,,Unknown,Class 3,,TIGR01293 ,Kv_beta ,voltage-dependent potassium channel beta subunit ,No data ,1.2e-06 , ,No data ,No data ,PF00248 ,Aldo_ket_red, Aldo/keto reductase family. This family includes a number of K+ ion channel beta chain regulatory domains - these are reported to have oxidoreductase activity.. ,COG0656 ,ARA1, Aldo/keto reductases, related to diketogulonate reductase [General function prediction only]. ,General function prediction only 
NC_009439,Chromosome,Pmen_0069,YP_001185575,146305110,Protein,67420,66677,,,short-chain dehydrogenase/reductase SDR,,,ATGCGCAAGAATCTGCTGATCACCGGTGCCAGCCGCGGCATCGGCCGTGCCACGGCCCTGCTGGCCGCCGCGGGCGGCTGGACGGTCGGGGTGAACTATCGCAGCGACCGCGCCGCCGCCGATGAGGTGGTGGCGCAGATCGAAGCCATGGGCGGCACAGCCGTCGCCCTGCCTGGCGACGTGGCCAATGAGCAAGAGGTGCAGCGCCTGTTCGAGGCCATGGACAGGCTCGGCCCGCTGCACGGTCTGGTGGTCAATGCCGGCATCGTCGCACCGCCCCTGCCGCTGCTGGAGATGAGCGGCGAGCGCCTGCGGCGCATGTTCGACGTCAACGTGCTGGGCAGCTACCTGACCGCGCGCGAAGGCGCCCGGCGCATGGCGCGCAGTCGCGGCGGCGAAGGTGGCTCGATGGTGCTGGTGTCTTCGGTGGCCGCCAGCCTGGGCGCGCCGTTCGAATATGTCGACTACGCCGGCGCCAAGGGTGCCATGGACGTGCTGACCCGCGGCCTGGCCAAGGAGCTGGGCGGTGAGGGTGTACGGGTCAATGCCGTGCGGCCGGGGCTGATCGACACCGAGATCCACGCCAGCGGCGGCCAGCCGGATCGCGCCGAGCGCCTCGGCAAGGCCACCCCGCTGGGCCGCGCCGGCCGCGCGGAGGAGGTTGCCGAGGCCATCGTCTGGCTGCTCGATGACAAGGCCAGCTACACCACCGGTGCGCTGATCGATATTGCCGGCGGGCGTTGA,MRKNLLITGASRGIGRATALLAAAGGWTVGVNYRSDRAAADEVVAQIEAMGGTAVALPGDVANEQEVQRLFEAMDRLGPLHGLVVNAGIVAPPLPLLEMSGERLRRMFDVNVLGSYLTAREGARRMARSRGGEGGSMVLVSSVAASLGAPFEYVDYAGAKGAMDVLTRGLAKELGGEGVRVNAVRPGLIDTEIHASGGQPDRAERLGKATPLGRAGRAEEVAEAIVWLLDDKASYTTGALIDIAGGR,PFAM: short-chain dehydrogenase/reductase SDR ;,,,,,,,,Cytoplasmic,Class 3,,TIGR01831 ,fabG_rel ,3-oxoacyl-(acyl-carrier-protein) reductase, putative ,hypoth_equivalog ,7.4e-33 , ,Fatty acid and phospholipid metabolism ,Biosynthesis ,PF00106 PF08659 ,adh_short, short chain dehydrogenase. This family contains a wide variety of dehydrogenases.. KR, KR domain. This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.. ,COG1028 ,FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]. ,Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 
NC_009439,Chromosome,Pmen_0070,YP_001185576,146305111,Protein,68385,67576,,,tryptophan synthase, alpha subunit,,,ATGAGCCGCCTGCAGAACCGTTTCGCCGAACTGAAAGCGGAAAACCGCGCCGCGCTGGTGACCTTCGTCACCGCCGGTGATCCCGACTACGCCACCTCGCTGAGCATTCTCAAGGGCCTGCCGGAGGCCGGCGCCGACGTGATCGAGCTGGGCATGCCCTTCACCGACCCGATGGCCGACGGCCCGGCCATCCAGCTCGCCAACATCCGCGCACTGGCCGGCAAGCAGGGCATGCAGCAGACGCTGCAGATGGTTCGCGAATTCCGCGCCGGCAACCAGAGCACGCCGCTGGTGCTGATGGGCTACTACAACCCGATCTTCGTCTACGGCGTCGAGCGCTTCATCAGCGACGCCAAAGAGGCCGGCGTCGACGGCCTGATCGTGGTCGACCTGCCGCCGGAGCACAACGACGAGCTGTGCGAACCGGCGCAGAGCGCAGGTCTGGATTTCATCCGCCTGACTACCCCGACCACCGACGACGACCGCCTGCCCACCGTGCTGGCCGGCAGCTCCGGCTTCGTCTACTACGTGTCGGTGGCCGGTGTCACCGGCGCCGGTGCGGCGACCCTGGATCATGTCGAGGAAGCCGTGGCGCGCCTGCGTCGCCACACCGACCTGCCCGTTTGCATCGGCTTCGGCATCCGCACCCCGGAGCACGCCGCCGAAGTGGCCAAGCGCGCCGAGGGCGCGGTGGTCGGCTCGGCGCTGATCGACAAGATCGCCGAGGCGAAGAGCCCGCAGCAGGCCATCGACGGCGTACTCGGCCTGTGCCGCGAACTGGCCGAAGGGGTACGCGGCGCGCGCCGCTGA,MSRLQNRFAELKAENRAALVTFVTAGDPDYATSLSILKGLPEAGADVIELGMPFTDPMADGPAIQLANIRALAGKQGMQQTLQMVREFRAGNQSTPLVLMGYYNPIFVYGVERFISDAKEAGVDGLIVVDLPPEHNDELCEPAQSAGLDFIRLTTPTTDDDRLPTVLAGSSGFVYYVSVAGVTGAGAATLDHVEEAVARLRRHTDLPVCIGFGIRTPEHAAEVAKRAEGAVVGSALIDKIAEAKSPQQAIDGVLGLCRELAEGVRGARR,TIGRFAM: tryptophan synthase, alpha subunitPFAM: tryptophan synthase, alpha chain ;,,,,,,4.2.1.20 ;,,Unknown,Class 3,GO:0004834 ;,TIGR00262 ,trpA ,tryptophan synthase, alpha subunit ,equivalog ,3e-79 ,4.2.1.20 ,Amino acid biosynthesis ,Aromatic amino acid family ,PF00290 ,Trp_syntA, Tryptophan synthase alpha chain.. ,COG0159 ,TrpA, Tryptophan synthase alpha chain [Amino acid transport and metabolism]. ,Amino acid transport and metabolism 
NC_009439,Chromosome,Pmen_0071,YP_001185577,146305112,Protein,69617,68382,,,tryptophan synthase, beta subunit,,,ATGACAGCCATGCCTGGTTCACAGAATTCTTTCCGCACCGGCCCCGACGCTCGCGGCCTGTTCGGCCGCTTCGGCGGTCAGTTCGTCGCCGAAACCCTGATGCCGCTGATCAACTCGCTGGCCGCCGAATACGAAAAGGCCAAGAGCGATCCGGCCTTCCTCGAAGAACTGGCCTACTTCCAGCGCGACTACATCGGTCGCGCCAGCCCGCTTTACTACGCCGAGCGCCTGAGCCAGCACTTCGGCGGCGCGAAGATCTACCTCAAGCGCGAAGACCTGAACCACACCGGCGCGCACAAGATCAACAACTGCATCGGCCAGATCCTCCTGGCCAAGCGCATGGGCAAGCAGCGCATCATCGCCGAGACCGGCGCCGGCATGCACGGCGTGGCCACCGCCACCGTGGCCGCGCGCTTCGGCATGCAGTGCGTGGTGTACATGGGCACCACCGACATCGACCGCCAGCAGGCCAACGTCTTTCGCATGAAGCTGCTCGGCGCCGAGGTAATTCCGGTCACCGCCGGCACCGGCACCCTCAAGGACGCCATGAACGAGGCCCTGCGCGACTGGGTGACCAACGTCCACAACACCTTCTACCTGATCGGCACCGCCGCCGGCCCGCACCCGTACCCGGCCATGGTCCGCGACTTCCAGTCGGTGATCGGCAACGAAGTGCGTGAGCAGATCCTGGCGAAGGAAGGGCGTCTGCCCGACTCGCTGGTGGCCTGCATCGGTGGTGGCTCCAACGCCATCGGCCTGTTCCACCCCTTCCTCGATGATGAAGGCGTGCAGATCATCGGCGTCGAGGCGGCCGGCCACGGCATCGACACCGGCAAGCATGCGGCGAGCATGGCCGGCGGCGCGCCGGGCGTGCTGCACGGCAACCGCACCTTCCTGCTGCAGGACGAGGACGGCCAGATCACCGATGCCCACTCGATTTCCGCCGGCCTCGATTACCCCGGCGTCGGCCCGGAACACGCCTGGTTGCACGAGATCAAGCGCGTCGAATACGTGCCGATCAGCGATGACGAAGCCCTCGAAGCCTTCCACCACTGCTGCCGCCTGGAAGGCATCATCCCGGCCCTGGAAAGCGCTCATGCGCTGGCCGAAGCCTTCAAGCGTGCGCCGAAACTGCCCAAGGATCACCTGATGGTGATCAACCTGTCCGGTCGTGGCGACAAGGACATGCAGACCGTGATGCACCACATGCAGGACAACCAGGAGAAACACGCATGA,MTAMPGSQNSFRTGPDARGLFGRFGGQFVAETLMPLINSLAAEYEKAKSDPAFLEELAYFQRDYIGRASPLYYAERLSQHFGGAKIYLKREDLNHTGAHKINNCIGQILLAKRMGKQRIIAETGAGMHGVATATVAARFGMQCVVYMGTTDIDRQQANVFRMKLLGAEVIPVTAGTGTLKDAMNEALRDWVTNVHNTFYLIGTAAGPHPYPAMVRDFQSVIGNEVREQILAKEGRLPDSLVACIGGGSNAIGLFHPFLDDEGVQIIGVEAAGHGIDTGKHAASMAGGAPGVLHGNRTFLLQDEDGQITDAHSISAGLDYPGVGPEHAWLHEIKRVEYVPISDDEALEAFHHCCRLEGIIPALESAHALAEAFKRAPKLPKDHLMVINLSGRGDKDMQTVMHHMQDNQEKHA,TIGRFAM: tryptophan synthase, beta subunitPFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit ;,,,,,,,,Unknown,Class 3,GO:0004834 ;,TIGR00263 ,trpB ,tryptophan synthase, beta subunit ,equivalog ,3.1e-292 ,4.2.1.20 ,Amino acid biosynthesis ,Aromatic amino acid family ,PF00291 ,PALP, Pyridoxal-phosphate dependent enzyme. Members of this family are all pyridoxal-phosphate dependent enzymes. This family includes: serine dehydratase EC:4.2.1.13 P20132, threonine dehydratase EC:4.2.1.16, tryptophan synthase beta chain EC:4.2.1.20, threonine synthase EC:4.2.99.2, cysteine synthase EC:4.2.99.8 P11096, cystathionine beta-synthase EC:4.2.1.22, 1-aminocyclopropane-1-carboxylate deaminase EC:4.1.99.4.. ,COG0133 ,TrpB, Tryptophan synthase beta chain [Amino acid transport and metabolism]. ,Amino acid transport and metabolism 
NC_009439,Chromosome,Pmen_0072,YP_001185578,146305113,Protein,69732,70400,,,hypothetical protein,,,ATGAAGGATCGCTGGTTATGGACTTTTCCCGTGGTAGGCGCTTTTCTTGTTGCCATCGCATTGGTACTACAAATTCACAGATGGAACGAAGAGGAGCGCATGTTGCGAACGACCGGCAGTGTGGTGGCGGTGATGGGCAGGGGTTGTCCTCTCGTCGAGTTCTTCCCCCTTCCGGGGGAGCGAGTCACCTTCACTGGCGAGGTCTGCAGCCGGCCTGGTTATGCCAAAGGCGATATTGTCGAGCTGTTCTACGACCCCTTGGAGCCGCAGAACGCGCATATCGATAGCTTTCTGCAGAACTGGTTCGTCAGCCTGATACTAGGTGGCATTGGTCTGTTCTTTACGTTAGTCGGTCTGGCTCTGTTAATGCCCGAGGCGCTTGTCGACGGTCGGCGCAATCGACTCAAACGTAAAGGCCAGGCCGTACAGGCACAGTTCGTGGAGGTCCGGCGCAACCCGCTTTCCACCCTCAACAACGTGCCGGCCTGGCAACTGGTCTGCCAGTGGTACAACCCGAGCAGCGGCGCGGTACATCTGTTCTACAGCGAAGACCTGTGGTTCGACCCGCAGCCGTTTATCGAGAATGAATTTCTGCAGGTAATGGTCGATCCCGATGACCTTCGGCGTTATAGCGTCGATACCAGCTTCCTACCGCGCCTGGCAGATTGA,MKDRWLWTFPVVGAFLVAIALVLQIHRWNEEERMLRTTGSVVAVMGRGCPLVEFFPLPGERVTFTGEVCSRPGYAKGDIVELFYDPLEPQNAHIDSFLQNWFVSLILGGIGLFFTLVGLALLMPEALVDGRRNRLKRKGQAVQAQFVEVRRNPLSTLNNVPAWQLVCQWYNPSSGAVHLFYSEDLWFDPQPFIENEFLQVMVDPDDLRRYSVDTSFLPRLAD,,,,,,,,,Cytoplasmic Membrane,Class 3,,,,,,,,,,,,,,
NC_009439,Chromosome,Pmen_0073,YP_001185579,146305114,Protein,70405,71316,,,transcriptional regulator, LysR family,,,ATGAATCGCGACCTGCCCCCGCTAAACGCTCTGCGCGCCTTCGAAGCGGCTGCCCGCCTGCAAAGCGTCAGCCGCGCCGGCGAGGAGCTGCACGTCACCCATGGCGCGATCAGCCGCCAGATCCGCGTGCTGGAGGAGCAACTTGGCGTCAGCCTGTTCGACAAGGACGGCCGCGGCGTGAAACTCACCGAGGCCGGGGTGCGCCTGCGCGATGCGGCGGGCGATGCCTTCGAGCGTCTGCGTGGGGTCTGCGCCGAGATCCGCCAACGCCAGGAGGGCGCCCCCTTCGTGCTCGGCTGTCCCGGCAGTCTGCTGGCGCGCTGGTTCATTCCCCGCCTGGATCGCCTGAACCGCGATCTGCCCGAGTTGCGTCTACAGCTGTCGGCCAGCGAGGGTGAGCTGGACCCGCGCCGGCCCGGTGTGGACGCCACACTGTGTTTCGCCACGCCGCCCTGGCCGGCGGATGTACAGGTGCATGAACTGGACACCGAGCGCATCGGGCCGGTGCTCAGCCCGCGCTATGCCGGGTATGAGGCTCTGCGGGGTGCGCCCGCCGCCGCGCTGCTCGGCGAGCCGCTGCTGCATACCGTGTCGCGGCCACAGGCCTGGCCGCAATGGGCGCTGGCGCAGGGGCTGGAGCCGGCGCGCCTGCAGCAGGGGCAAGGCTTCGAACATCTCTACTACCTGCTGGAGGCTGCCGCCGCAGGGCTTGGCGTGGCCATCGCGCCGCAGCAATTGGTGGCGGACGATCTGGCCGCCGGGCGCCTGCTGGCGCCCTGGGGCTTCGTCGAGACAGGGGCAAAACTGGCCCTGTGGGTGCCGGGCCGAGGGCATGACCTGCGTGCCGAGCGCCTGGCCGGCTGGCTGGCCGCGGAGCTGAACGGACTTGCTGCGCTTCGGTCGCCGGTATAG,MNRDLPPLNALRAFEAAARLQSVSRAGEELHVTHGAISRQIRVLEEQLGVSLFDKDGRGVKLTEAGVRLRDAAGDAFERLRGVCAEIRQRQEGAPFVLGCPGSLLARWFIPRLDRLNRDLPELRLQLSASEGELDPRRPGVDATLCFATPPWPADVQVHELDTERIGPVLSPRYAGYEALRGAPAAALLGEPLLHTVSRPQAWPQWALAQGLEPARLQQGQGFEHLYYLLEAAAAGLGVAIAPQQLVADDLAAGRLLAPWGFVETGAKLALWVPGRGHDLRAERLAGWLAAELNGLAALRSPV,PFAM: regulatory protein, LysR ;,,,,,,,,Cytoplasmic,Class 3,,TIGR02036 ,dsdC ,D-serine deaminase transcriptional activator ,equivalog ,2.7e-13 , ,Regulatory functions ,DNA interactions ,PF00126 PF03466 ,HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family.. LysR_substrate, LysR substrate binding domain. The structure of this domain is known and is similar to the periplasmic binding proteins.. ,COG0583 ,LysR, Transcriptional regulator [Transcription]. ,Transcription 
NC_009439,Chromosome,Pmen_0074,YP_001185580,146305115,Protein,71370,71609,,,hypothetical protein,,,ATGAAAGAAAGTCGTGACTATCTGGAGATGGCCTTCCGCTCCATCAAATGCTTCGCCGATGACGGCAAGCTGCTGGTTCACGAGCTCGAAAGCCTGGTCGATATCGCCCGCCGCGACGGCGTGGTCGATGCCAACGAGAAGCGCATCCTGCAGGGCATCGTCGCCCGCCTGAACCCCGCCGAACTGACCGCCGACATGCAGACCAAGATCGCTGCGCTGAGGGCCGAGCTGCAGTTTTGA,MKESRDYLEMAFRSIKCFADDGKLLVHELESLVDIARRDGVVDANEKRILQGIVARLNPAELTADMQTKIAALRAELQF,,,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,,,,,
NC_009439,Chromosome,Pmen_0075,YP_001185581,146305116,Protein,71708,71923,,,protein of unknown function DUF1458,,,ATGACCGATCACCACACCTACAAGAAGATCGAAATCGTTGGTTCATCGCGAACCAGCATCGAGGACGCCATCGAGAACGCCCTGAGTGAGTGCGCCAAGAGCGTACGCAACATGGACTGGTTCGAGGTGGTGGAAACCCGTGGCCATATCGAGGACGGCAAGGTGGGTCACTACCAGGTCACCCTCAAGGTCGGCTTTCGCCTGAGCGGTAGCTGA,MTDHHTYKKIEIVGSSRTSIEDAIENALSECAKSVRNMDWFEVVETRGHIEDGKVGHYQVTLKVGFRLSGS,PFAM: protein of unknown function DUF1458 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,PF07311 ,DUF1458, Protein of unknown function (DUF1458). This family consists of several hypothetical bacterial proteins as well as one archaeal sequence. Members of this family are typically of around 70 residues in length. The function of this family is unknown.. ,COG3360 ,COG3360, Uncharacterized conserved protein [Function unknown]. ,Function unknown 
NC_009439,Chromosome,Pmen_0076,YP_001185582,146305117,Protein,72869,71892,,,NAD-dependent epimerase/dehydratase,,,ATGCGCGTTCTGATCACCGGCGCAGCCGGCTTCATCGGCCACCAACTGCTCGACGAACTGGCCATTCAGCATCCGCAATGGACGCTGATCGCCGCCGATATCC