Replicon Accession,Replicon Name,Locus tag,RefSeq Accession,RefSeq GI (protein ID),Category,Start,Stop,Gene name,altGeneName,Product name,altProteinName,Product Name Rating,Nucleotide Sequence,Amino Acid Sequence,comment,evidenceReferences,genomicContext,homology,structureFeature,pathway,ecNumber,functionClass,localization,localizationClassConfidence,geneOntology,tigrfamAccession,tigrfamName,tigrfamFunction,tigrfamIsologyType,tigrfamSignificance,tigrfamEcNumber,tigrfamRole,tigrfamSubRole,pfam,pfamDescription,cog,cogDescription,COG_Category,primaryFunctionClassID
NC_004633,Plasmid_pDC3000A,PSPTOA0001,NP_808663,29171479,Protein,351,1664,repA,,replication protein RepA,,,ATGAGCCACGACAACGCGATCAGTCTTGCCCTCGCGACCTCATCCACGGCCAACACCGATCCGCTGGCCAGCAGCACCCACCTGCCGCCTGCCCGTTTCTTCGAAGACGGCACTGCGCTCAACCGGTTATTGCTGGAAGCGCCGTACATGGCGCGGTGCAGTGACGACAAAACCGCGACTCGCGTCCGTCCTCGTGAATACGCGCTGCGTTATCCCTATATGCAGGTCAATCGCCCCGGCATGGTGTCGTGGCTGGTGTTCGACCTCGACCATGCCAACGCCTTGGCTTGGGACGATGCCGGGTTGCCCGCGCCGAACCTGATGGTGCGCAACCGCAAAAGCGGCCATTCCCAGTTGTTCTATGCCGTGCCGTCCGTATGCACGACAGAGAATGCACGGGCCAAGCCGATTCAGTACATGAAGGCGATCTATGCCGCGTTTGCCGCTCGCCTCGACGCGGACGTGGACTACCACGGTGGCCCCGTGGCCAAAACGCCCGGCCACCCTTGGTGGGAGACGACCGAATTTCACAGCCACGTGTATGAACTGGGCGAACTGGCGAGCGCGGTGGAGTTGACCGTCAAGCCGTGGGCCACCGGCCCCAAGCTGGACCAGGTCAGCCATTCGCGGCACTGCATCCTGTTCGAGCAGCTGCGTTATTTTGCGTACAGCATCGTCAATCGCGAGCGCGAGCTGGGTTCGTTTGAGTCGTTCATGCGCTCGCTCGATGCGTATGCCTACAACCACAACAGCTTTCTAAAACAGGGGTTTTCGGAAAACCTGCCCCTGTCGTCGATACGCGCCACGGTCAAATCCGTAGGCCGCTGGACGTGGGATCGGTACACCGGTGATCGTCGCTGCCATCGAGGCGCAATGCAGCTCGATGGCAGCCTGTCGCTCACCGAGCGGCAGAGCCTGGCGGCCAGGCGCACCCATGAACTACGACACAAAGCCACAGAATCGAAGATACGCGCCGCGTGCCGACAGCTTCAAGACCAGGGCAAGGCGCTGGTACGTTCTGCCATTGCAACACTCGCCGGCGTTTCGGTGAGAACGGTGGCCAGCTACACGCACATCCTCACTGAAGTGGCTCAACCGACCACTGTGAGCGTTCTCAAGGTCAGCCGTAAGGCTGTGCCCATGCAACCTAAGCAAGATCGCTCACCCGCTACCCCACCTGTTCGGGCCCCCGTTGGTCAGCCTGCTGATGGCCGCGCTTCGGGTGTGCAACATGGTGTACATCAGATATCTGCGGTCACGCAGGGGCCGCAAGCTGGAGAGCCCTTAAAAACAGAACATGAGGATGGTTCATGA,MSHDNAISLALATSSTANTDPLASSTHLPPARFFEDGTALNRLLLEAPYMARCSDDKTATRVRPREYALRYPYMQVNRPGMVSWLVFDLDHANALAWDDAGLPAPNLMVRNRKSGHSQLFYAVPSVCTTENARAKPIQYMKAIYAAFAARLDADVDYHGGPVAKTPGHPWWETTEFHSHVYELGELASAVELTVKPWATGPKLDQVSHSRHCILFEQLRYFAYSIVNRERELGSFESFMRSLDAYAYNHNSFLKQGFSENLPLSSIRATVKSVGRWTWDRYTGDRRCHRGAMQLDGSLSLTERQSLAARRTHELRHKATESKIRAACRQLQDQGKALVRSAIATLAGVSVRTVASYTHILTEVAQPTTVSVLKVSRKAVPMQPKQDRSPATPPVRAPVGQPADGRASGVQHGVHQISAVTQGPQAGEPLKTEHEDGS,similar to GP:2664218 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,PF03090PF08708,"Replicase, Replicase family. This is a family of bacterial plasmid DNA replication initiator proteins. Pfam: PF01651 is a similar family. These RepA proteins exist as monomers and dimers in equilibrium: monomers bind directly to repeated DNA sequences and thus activate replication; dimers repress repA transcription by binding an inversely repeated DNA operator. Dimer dissociation can occur spontaneously or may be mediated by Hsp70 chaperones..PriCT_1, Primase C terminal 1 (PriCT-1). This alpha helical domain is found at the C terminal of primases..",,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0002,NP_808664,29171480,Protein,1803,2228,rulA,,ultraviolet light resistance protein A,,,ATGAACGTCAAAATACTCGGTCGGTTGTGCGAATCCGGTAAGGTCATACCCTTCTACACTTTCAAAATCCCTGCCGGTTTTCCTAATCCTGCAGCGGACCACATCGAGCAAGACTTCTCATTCGACCGGCTGATGGATTTGCGCGCCCCTCACATTTACGTGGCCAAGATCGATGGCGACAGCATGGAGGGTGCAAAGATCTTTCATGACAGCTTGGTGGTTGTAGATCGCTCTCGAAAGCCGTCGAGTGGCAGCATCGTGATCGCGGCACTGAATAATGAGCCTCTGTGCAAAATCCTCATCCTGCAGGGCGACCATGTGGTGCTGAAGTCAGCCAACCCTGCCTATCCGCCTCGGCATATCCTGGAAGGTGAAGAGCTGTCGATATGGGGCGTTGTGCGACATGGCGTTACGAGCTTTGAGTAA,MNVKILGRLCESGKVIPFYTFKIPAGFPNPAADHIEQDFSFDRLMDLRAPHIYVAKIDGDSMEGAKIFHDSLVVVDRSRKPSSGSIVIAALNNEPLCKILILQGDHVVLKSANPAYPPRHILEGEELSIWGVVRHGVTSFE,"similar to GP:11640739,  and GP:11640735 ;",,,,,,,,Unknown,Class 3,,,,,,,,,,PF00717,"Peptidase_S24, Peptidase S24-like..",COG1974,"LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms].",Transcription / Signal transduction mechanisms,
NC_004633,Plasmid_pDC3000A,PSPTOA0004,NP_808665,29171481,Protein,2530,3540,,,"site-specific recombinase, phage integrase family",,,ATGGCCTCTATTGCCTCTTATGAGCACGTGCTTCACCGCTACCCCAGCGTTCAGCAATGGCTGGCGCTGCTCGGTAACCTGGGAAGAGCACCGGCTACCTTGGATGCCTACGGCAGGGGATTGGCGCATTACTTGCTCCACTGCGAAGCCTCCGGTCTGGAGGCTGAATCCATCACATTTGAGCAAGTCACGCTCTACATCCGTCGGCTACTGCCCGGGCAAGAAAACGCGGTGGCGAATTCGACCTTGCACCAGCGCCTCACCGCGATCCGCCTGTGGTACGACCACCTGGTGTTTCAGGGGCGTTGCGCACAGAATCCGGTACCTCGCGGCCAGCACGGCCGCCTGTGTCAGATCCCTGGACATTCAGGCTTTATGAGAGGGCTGGTGCCTCGCCTGATAAAGCTGCCCGACATCCCCTCGGATGAGCAGTGGCGTTACTTTCTCAGCATCGCGGCCAGGTCGTCTATTCGTGATCGACTTATGCTCTCGTTGGCATACTGCGGTGCGCTCCGTCGTGCCGAACTGGTGGGCCTGAGAATCGAAGACCTGGATCTCGCCCATCGACTCATTTCAGTGCGCGCAGAAACGACCAAAGGCCGACGCAGCCGTGTCGTGTGCTACAGCCCTGACATTGCGCCGATACTTGGAACGCATCTTCATGCCCTTCGTCTGGCCGGTTGGTCGAGAGGAGCCCTGTTTCGATCCGAGTCTGATCGCAATCGAGGTTCGGCACTCACGCGGTGGACGTGGAGTAAAACGGTAGAAAGATGGGCCACGGACTCAAATCTGTCATGCCTGAGTACACACACTTTTCGTCATCTGCGACTCACGCATTTGGCTCGTGCGGGGTGGAAACTGCATGAGTTGATGGCCTATGCAGGTCACCGGGATCCGAAGACCACCTTGATTTATGTGCACCTGTCGGGCGCGGACCTGACTGCAAAAATGGCGCATTCGGTGGGTAGTCTGGACGCCCGACTGTTCGCTGAACTCTTCAAGTCGGAGTAA,MASIASYEHVLHRYPSVQQWLALLGNLGRAPATLDAYGRGLAHYLLHCEASGLEAESITFEQVTLYIRRLLPGQENAVANSTLHQRLTAIRLWYDHLVFQGRCAQNPVPRGQHGRLCQIPGHSGFMRGLVPRLIKLPDIPSDEQWRYFLSIAARSSIRDRLMLSLAYCGALRRAELVGLRIEDLDLAHRLISVRAETTKGRRSRVVCYSPDIAPILGTHLHALRLAGWSRGALFRSESDRNRGSALTRWTWSKTVERWATDSNLSCLSTHTFRHLRLTHLARAGWKLHELMAYAGHRDPKTTLIYVHLSGADLTAKMAHSVGSLDARLFAELFKSE,similar to GP:9187580 ;,,,,,,,,Unknown,Class 3,GO:0009009 ;,TIGR02224,recomb_XerC,tyrosine recombinase XerC,equivalog,4.00E-10,,DNA metabolism,"DNA replication, recombination, and repair",PF00589,"Phage_integrase, Phage integrase family. Members of this family cleave DNA substrates by a series of staggered cuts, during which the protein becomes covalently linked to the DNA through a catalytic tyrosine residue at the carboxy end of the alignment. The catalytic site residues in CRE recombinase are Arg-173, His-289, Arg-292 and Tyr-324..",COG4974,"XerD, Site-specific recombinase XerD [DNA replication, recombination, and repair].","DNA replication, recombination, and repair",
NC_004633,Plasmid_pDC3000A,PSPTOA0005,NP_808666,29171482,Protein,6561,5731,hopAM1-2,,type III effector HopAM1-2,,,ATGCACGCAAATCCTTTAAGCTCTTTCAACAGAGCTCAACATGGCAATCTGACTAATGTAGAGGCCAGCCAAGTTAAATCGGCAGGAACCTCTTCCACCACTAATATAGACAGTAAAAACATTGAAGAACATGTTGCAGACAGACTCAGTGATTTAGGCAGACCTGATGGTGGATGGTTTTTCGAGAAGTCACTTGGCACCTTGAAAAATTTAAATCTTGAGCAGTTAGCCGGAATCCATGATGTACTAAAATTAACAGATGGCGTAAAGAACATTGTCTCTTTTGGAGCTCGGGAAGGAGGCTTCGAGTTGGCAATGCAGTTTCGTCATGATTTATACAGATCTCAACATCCGGATGAAAACTCGCCGCACGATGCCGCAACTCATTATCTTGATGCAATCAGCCTGCAATCAAACAAATTTACAAAACTTGAAAAACTACAACATGTAGATGTATTTAAAATGCAAAACCCGTTTTGGGATGTCGGGTACAAAAACGGAATTGCGCACGCAAAAAAAATGGCATTCTTCATAACGCCAGAGTGGCTGGGTTCTGATTTCTGTAAACAGGAATTCCAGTGGCTTAGCGAAACAAAAAACAAAGACATAAAATCTGCATTTGTGATCTTTAAAGATGTAGACTTAAAAAGCAAAAATATGACAAGTATCTTCAATTTTGCAGACTTCCATAAATCACGCGTCATGATGGCAAGCACACCTCCCGAATCGGGATTGAATAATGTAAAAATCGAAAATAGCGTTGACCTGAATTTCAAGAGGTTATTAACTGACCGTGAGTCATGGGAACTAAATAATTTCCTAGGCGACTAA,MHANPLSSFNRAQHGNLTNVEASQVKSAGTSSTTNIDSKNIEEHVADRLSDLGRPDGGWFFEKSLGTLKNLNLEQLAGIHDVLKLTDGVKNIVSFGAREGGFELAMQFRHDLYRSQHPDENSPHDAATHYLDAISLQSNKFTKLEKLQHVDVFKMQNPFWDVGYKNGIAHAKKMAFFITPEWLGSDFCKQEFQWLSETKNKDIKSAFVIFKDVDLKSKNMTSIFNFADFHKSRVMMASTPPESGLNNVKIENSVDLNFKRLLTDRESWELNNFLGD,Also known as AvrPpiB2 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0007,NP_808667,29171483,Protein,8255,7782,,,hypothetical protein,,,GTGAACCAAAATCAGCGCAAAGATTGGATAATTTCAACGAAAAAGGATAACCAAATGGATAGAAATCAAAATCGCGGAGCTGAAATACTTGCACTTACCTTGGGCCTTGCCATGGTCTGTTACGTTGTTGCCAAGGCGTTTTCAGACTACCTGGGCGTGGACATCACAGCCGGGGGGCGGGTACTTTTAGCGCTTTTAATGGCCCTGGGTATGATTGGCTATGCAGTCTGGAGCGAGCTGACAAATGGGTTCCTCGGCTTCAGGGCACTTTTACCGTTGGCATTTTCCACTCTCTGGAGCGGTATGTGGCCAGCCATGCAGTATTGGGGCACCAAGTCGCTGTATTTCCCCGGCCTGCCTAGTGAGTATCAAGACTTGGAATGGTGGGCAAATGGATATACTCAGTGGGGTGGATGGGCTCTCATCCTGTTCGGCGGATATGGCATTGCATATTTCACCTGGCGGGCTAGGTAA,MNQNQRKDWIISTKKDNQMDRNQNRGAEILALTLGLAMVCYVVAKAFSDYLGVDITAGGRVLLALLMALGMIGYAVWSELTNGFLGFRALLPLAFSTLWSGMWPAMQYWGTKSLYFPGLPSEYQDLEWWANGYTQWGGWALILFGGYGIAYFTWRAR,similar to GP:14488264 ;,,,,,,,,Cytoplasmic Membrane,Class 3,,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0008,NP_808668,29171484,Protein,9136,8252,,,"partion protein, ParB family",,,ATGCTTCAAAGAATGAGCCAAGACTCCGAATCACCACAACTACAGGTGCCGAATTCAGAAGCGGCCTCAAGCAGGACCGCTATCCATATTCTGAATGTTGACCAGATAGTAAAATCACCATTTCAGCCAAGATTAGTTTTCGATCAGGCTGCACTCGAAGATCTTGGAACGTCAATCCAGACAATTGGTCTGGGACAGCCAATCCTTGTCAGGCCGCTGCCGAACGGACTTTTTGAGTTGATAGGCGGGGAGCGTCGATGGAGAGCTTCTAAACTCATCGGCAACATGACCATAGAAGCTATGGTCAAGCCCATGTCAGATGATCTCGCAATGCTTTTGGCGTTGACAGACAACGACCAGGAAGACCTCACAGACTATGAGAAAGCTCGTAGCTATTACTGTCTTCTCAAAAATGGTGAAGATTCGAGTATGCGTGCTCTAGCAAGGCGACTAGGTACGAATCATTCAGTGATCAGCCGTCTCCTGCAGCTGACACAATTACCCGAGAGCATACGCACAATACTGGACGGGCATCCAGCGCTAATCACGGCGAATTACGCTAAAGATTTCAAAGACCTATCCACTATCAATGAAGATTTAGTAGTAAATGTGGTCGAAAAAATGGCTTCAACTGGACTGCCACAAGAAGCTGCACTGAAATTGATAAGACGTGAAGTTGATTCGTTAAGCAGACCTGAAGCAAAGCAGGCAAAAAAAAGTGCAGTAGACGGGATAGGGACACTGCGTATTCTGGGTGACAGGGTTGAGGTCAAGTGTGCAAAGGGAATTGACGCTACAAAACTCGCTCAGGAATTTTTGACATTCCTGCATTCTTTGGATAAAGCTCAAATCCTAGAAGCTGATGAGTCCCCGTCGGGCCAGTGA,MLQRMSQDSESPQLQVPNSEAASSRTAIHILNVDQIVKSPFQPRLVFDQAALEDLGTSIQTIGLGQPILVRPLPNGLFELIGGERRWRASKLIGNMTIEAMVKPMSDDLAMLLALTDNDQEDLTDYEKARSYYCLLKNGEDSSMRALARRLGTNHSVISRLLQLTQLPESIRTILDGHPALITANYAKDFKDLSTINEDLVVNVVEKMASTGLPQEAALKLIRREVDSLSRPEAKQAKKSAVDGIGTLRILGDRVEVKCAKGIDATKLAQEFLTFLHSLDKAQILEADESPSGQ,similar to GP:6273613 ;,,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,PF02195,"ParBc, ParB-like nuclease domain..",COG1475,"Spo0J, Predicted transcriptional regulators [Transcription].",Transcription,
NC_004633,Plasmid_pDC3000A,PSPTOA0009,NP_808669,29171485,Protein,10484,9357,,,"ATPase, ParA family",,,ATGACTCCTGCCGATAACGAAATAGCTGAACAGCAGAATTTTGTAGACTTCAACTCCATTCTTTATACGCCTCAGTACGCCGCTGGCTGCTTCGGTCTGACTACGCGTCGACTTATGGCCATTGAAGAAGAACACGGCTTGGACATCAAACGCATAAAGCGTGGGTCGTCTACATCCAGGGTCTACACGGCCTCGGATCTTTTCAACATCGCCGCGCTGCGTCGGTCGCTAGGCCATCTCAAACCAATTGGTCGTCAAATTGTCGCTTCAACCTTCGTGCCAAAGGGCGGGACTGCCAAGACCACTACCGCGGTCAACCTTGCTATTAGCGCTCAATTTGCAGGGATTAAGACACTAATTATCGATAATGACCCTCAGGGTGATACCTCAAACATGCTGGGTTATGACCCCGACCTCAGCCCAGATGATCTCGTCGACATGAACATTCCTTCAGATCGGCTGGTGGATGGACATTTTGGCAATCTTCTCAGCCCGTTGCTTCGAATGAAGCCTTTTTCAGAAAAGGTGCTCGCTGATGTGATCAAAAAACCTTTTGGCGAAAACGGCATTCATCTCATCCCGGCTGACACATATCTTGAGGATTTGGCTGTTGCGCTCGATGCTTCGAACAATTCGGATATGTGGTATGCCCGATTCATCGAAGACGCAAATGCAGGAAAAGTACCAGGATGTGACCTTTCTGTTTATGACCTGATAATTATTGACAACGCGCCTGCTGGCTCTCGATTGACCAAGAATTCAGTTGCAGCTAGCGATCTATTGTTGTGCCCCGTTCGGATGGACAAATTTTCGTTCAGAGCACTGTTAAGGTTGCATGAGTGGTGCGCTCGATTCGCAAAAGAGTACAGCTATGCGCCTGCTCTCATGGCTATTCCTACGATGTTTATTCGCAAGCGCGCTAGGTTGTTAGCAAATCTTCAATCACTCAACACGCTTTTCCCTGGGCAGGTAACTGAGGAAAAAATCTATTTTTCCGAAGATTATTCGAAGTCACTGGATGATGGTATTCCTCTCATGTTGTGGAAGAGGGCGAACTCACAAACCATCGACACTGCAAGGCTTGTCTTTGGTGAAATCTTGCAGAAGATTCGCAGCTTGGCCGCCTGA,MTPADNEIAEQQNFVDFNSILYTPQYAAGCFGLTTRRLMAIEEEHGLDIKRIKRGSSTSRVYTASDLFNIAALRRSLGHLKPIGRQIVASTFVPKGGTAKTTTAVNLAISAQFAGIKTLIIDNDPQGDTSNMLGYDPDLSPDDLVDMNIPSDRLVDGHFGNLLSPLLRMKPFSEKVLADVIKKPFGENGIHLIPADTYLEDLAVALDASNNSDMWYARFIEDANAGKVPGCDLSVYDLIIIDNAPAGSRLTKNSVAASDLLLCPVRMDKFSFRALLRLHEWCARFAKEYSYAPALMAIPTMFIRKRARLLANLQSLNTLFPGQVTEEKIYFSEDYSKSLDDGIPLMLWKRANSQTIDTARLVFGEILQKIRSLAA,identified by match to PFAM protein family HMM PF00991 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,PF01656,"CbiA, CobQ/CobB/MinD/ParA nucleotide binding domain. This family consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from S.typhimurium, and CobQ from R. capsulatus. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria. The family also contains dethiobiotin synthetases as well as the plasmid partitioning proteins of the MinD/ParA family..",COG1192,"Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].",Cell division and chromosome partitioning,
NC_004633,Plasmid_pDC3000A,PSPTOA0010,NP_808670,29171486,Protein,14193,11224,,,"transposase, Tn3 family",,,ATGCCACGTCGCTCGATTCTTTCCCTTGCGGAGCGGGAAAGCTTACTGGCGTTGCCAGATTCCCAAGATGAAATGATTCGTCACTACTCTTTCAGCGAAACCGACCTCGCCATCATCCGCCAACGGCGTGGGTCTGCAAATCGGCTGGGCTTCGCTGTACAGCTCTGTTACATGCGCTATCCCGGGGTAACACTTGCTATGGATGAAGAACCATTCGAGCCATTGCTGCGCTTGGTGGCCACGCAACTGAAGGTGCCGCCTGAAGCATGGGCTGACTATGGGCAACGCGCCGAGACGCGCCGCGAGCACCTGTTGGAATTACAAGCTCTTTTTGAGTTTCAGCCATTCACAACAAGACATTATCGTCCCTGCGTTCATAGTTTGGATGAACTGGCATGGCAGTCCGACAAAGGCTTCGTGTTGGCGACGGAGTTGGTTGAAGGGTTGCGACGACAGAACATATTGCTTCCATCACCAGGTGTGATCGAGCGCATTTGTGCTGAGGCAATCACCCGCGCCAATCGGCGGATCTATGAAGCCTTGTCCGAGCCTCTTTCGAATACACACCGCCGTTGCCTCGATGGCCTCCTTAGACGCCGAGACAAAGGCCAGACCACCTGGTTGGCCTGGTTACGCCAGTCGCCAGTTAAACCGAACTCACGGCACATGCTTGAACACATCGAGCGCCTCAAAGCATGGCAGGCTCTCGATCTACCAGCAGGCATTGAGCGGCTGGTTCACCAGAATCGCCTGCTCAAAATTGCCCGTGAAGGCGGCCAAATGACACCTGCTGACTTGTCCAAGTTCGAATTGCAACGACGCTACGCTACCCTTGTGGCACTGGCCATCGAGGGCATGGCCACCGTCACTGACGAAATCATCGACCTGCACGATCGTATCCTGGGCAAGCTGTTTAACGCAGCCAAGAATAAACACCAGAAACAGTTCCAGGCATCCGGAAAAGCGATCAACGCAAAGGTGCGAATTTATGGACGCATCGGCCAAGCCCTGCTGGAGGCCAAGCAAAACGGCTGCGATCCGTTTGCTGCCATCGAAGCGGTCATGTCTTGGGAGGCTTTCGCCAAGAGTGTCACCGAAGCGCAAAAACTTGCACAGCCCGAAGACTTCGACTTCCTGCACCGCATCGGCGAGAGCTACGCCACGTTGCGCCGCTATGCTCCGCAGTTTCTCGACGTACTCAAGCTGCGGGCTGCGCCCGCAGCCAAGGACGTGTTTGAAGGCATTGAGGTATTGCGCGCAATGAACACTGACAACGCCCGTAAGGTTCCCGTCGATGCCCCGATCGGGTTCATCAAGAAGCGCTGGAAGAAACTGGTTATAACCGACGGCGGTATCGACCGGCGCTACTACGAACTGTGCGTGATGTCGGAACTAAAGAACGCGCTGCGCTCTGGAGATATTTGGGTGCAGGGATCGCGTCAGTTCAAGGACTTCGAGGATTACCTGATGCCATCCGAGAAATTCGCCCATCTCAAGCTGGCCCATGAATTGCCTCTGGCCGTAGCCACCGACTGCGACAAATACCTGAACGACCGGTTGACGCTGTTGGAAGCTCAGCTTGCCACCGTGAACCGCATGGCTCTAGCCAATGACTTACCGGATGCCATCATCACCGAGTCTGGTTTGAAGATCACGCCTCTGGATGCGGCAGTGCCAGATACCGCACAGGCGTTGATTGATCAAACCGCAATGGCTATGCCGCATATCAAGATCACCGAATTGTTGTTGGAGGTGGACGAGTGGACAGGATTCACCCGGCATTTCGCACATCTGAAATCGGGTGACCTGGCCAAGGATAAGCACTTACTGTTGTCCACCATCCTGGCTGATGCGATCAACCTAGGCCTGGCTAAAATGGCCGAGTCTTGCCCTGGCACCACCTACGCAAAACTGTCCTGGCTACAAGCCTGGCACATCCGTGACGAAACCTATTCGGCCGCGCTGGCTGAGCTAGTAAACGCGCAGCTCCAACATCCTTTTTCCAAGCATTGGGGTGACGGTACCACATCATCGTCAGATGGACAGAATTTCAGAACTGGCAGCAAAGCCGAGAGTACGGGTCACATCAATCCCAAATACGGCAGCAGCCCGGGACGAACTTTTTACACCCACATTTCTGACCAGTACGCCCCGTATCACCTGAAGGTGGTCAACGTTGGCGTGCGCGATTCTACCTATGTGCTTGACGGGCTTCTGTATCACGAATCTGACCTGCGTATTGAGGAGCACTACACGGATACTGCGGGCTTCACAGATCACGTCTTCGGTCTGATGCATTTACTGGGTTTTCGCTTTGCACCGCGCATCCGCGACCTAGGCGATACCAAGCTGTTCGTGCCCCAAGGAAATATCGATTATGACGCGATTAAGTCAATGATTAGTAAAGAAAAACTGGATATCAAGGCCATTCGGACGCACTGGGATGAAATTCTGAGGCTGGCCACCTCGATCAAACAAGGTACCGTGACTGCCTCGCTGATGTTGCGCAAGCTGGGTAGTTATCCTCGGCAGAACGGCTTAGCCGTTGCCCTTCGCGAAATCGGTCGCATCGAACGCACGCTGTTCATTTTGGACTGGCTACAAAGTGCCGAGCTGCGCCGTCGTGTGAATGCAGGACTGAACAAGGGCGAAGCGCGCAATGCGCTGGCCAGGGCTGTCTTCTTTAACCGGCTGGGCGAAATCCGAGACCGTAGCTTCGAACAGCAACGCTACCGTGCCAGCGGCCTCAACTTGGTGACTGCTGCAATAGTGCTGTGGAACACGGTTTACCTGGAGCGGTCCGCAAACGCATTACGCGGACATAGCACCGCTGTCGATGAATCGCTGCTGCAGTACCTGTCGCCGCTGGGCTGGGAGCACATCAACCTAACTGGTGATTACCTGTGGCGCAGCACCGTCAAGGTTGGTGGAGGAAGATTCCGGCCATTACGACGACTGAAATCAGCTTAA,MPRRSILSLAERESLLALPDSQDEMIRHYSFSETDLAIIRQRRGSANRLGFAVQLCYMRYPGVTLAMDEEPFEPLLRLVATQLKVPPEAWADYGQRAETRREHLLELQALFEFQPFTTRHYRPCVHSLDELAWQSDKGFVLATELVEGLRRQNILLPSPGVIERICAEAITRANRRIYEALSEPLSNTHRRCLDGLLRRRDKGQTTWLAWLRQSPVKPNSRHMLEHIERLKAWQALDLPAGIERLVHQNRLLKIAREGGQMTPADLSKFELQRRYATLVALAIEGMATVTDEIIDLHDRILGKLFNAAKNKHQKQFQASGKAINAKVRIYGRIGQALLEAKQNGCDPFAAIEAVMSWEAFAKSVTEAQKLAQPEDFDFLHRIGESYATLRRYAPQFLDVLKLRAAPAAKDVFEGIEVLRAMNTDNARKVPVDAPIGFIKKRWKKLVITDGGIDRRYYELCVMSELKNALRSGDIWVQGSRQFKDFEDYLMPSEKFAHLKLAHELPLAVATDCDKYLNDRLTLLEAQLATVNRMALANDLPDAIITESGLKITPLDAAVPDTAQALIDQTAMAMPHIKITELLLEVDEWTGFTRHFAHLKSGDLAKDKHLLLSTILADAINLGLAKMAESCPGTTYAKLSWLQAWHIRDETYSAALAELVNAQLQHPFSKHWGDGTTSSSDGQNFRTGSKAESTGHINPKYGSSPGRTFYTHISDQYAPYHLKVVNVGVRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFGLMHLLGFRFAPRIRDLGDTKLFVPQGNIDYDAIKSMISKEKLDIKAIRTHWDEILRLATSIKQGTVTASLMLRKLGSYPRQNGLAVALREIGRIERTLFILDWLQSAELRRRVNAGLNKGEARNALARAVFFNRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLERSANALRGHSTAVDESLLQYLSPLGWEHINLTGDYLWRSTVKVGGGRFRPLRRLKSA,This gene assignment is based in part on its location adjacent to a gene for resolvase. ;,,,,,,,,Unknown,Class 3,,,,,,,,,,PF01526,"Transposase_7, Transposase. This family includes transposases of Tn3, Tn21, Tn1721, Tn2501, Tn3926 transposons from E-coli. The specific binding of the Tn3 transposase to DNA has been demonstrated. Sequence analysis has suggested that the invariant triad of Asp689, Asp765, Glu895 (numbering as in Tn3) may correspond to the D-D-35-E motif previously implicated in the catalysis of numerous transposases..",COG4644,"COG4644, Transposase and inactivated derivatives, TnpA family [DNA replication, recombination, and repair].","DNA replication, recombination, and repair",
NC_004633,Plasmid_pDC3000A,PSPTOA0011,NP_808671,29171487,Protein,14315,14860,,,"resolvase, putative",,,ATGCGACTTTTTGGTTATGCCCGCGTCTCCACCAGCCAACAGTCCCTTGACGTACAGATAAACGCGCTCAAGGCTGAAAACGTCAGCGCAGCAAGGATTTTTACTGACAAGGTCTCGGGCAGTCATGTGAACCGCGAAGGCCTCAAGCTGCTGCGGCTCAAGGTCGAAGAGGGCGATGTTGTCTTGGTAAAAAAACTTGACCGATTAGGTCGCGATACTGCGGACATGATTCAGCTCATCAAAGAGTTCGACGACATGGGCGTGGCCATCCGTTTTCTGGATGATGGCATCAGTACAGAGGGGACCATGGGAAAAATGGTGGTCACCATCCTGTCTGCGGTGGCTCAGGCCGAGCGCCTGCGCATACTGGAACGTACCAACGAAGGTCGTTTGGAAGCCAAGGCCAAGGGCGTGAAATTTGGCCGTAAACCTAAGGTGAATAAGGCCGATGTCTTCACCCTGCACGATCAGGGTGTCAGTGCGATGGAGATTGCCAGGCAGCTGAAGATCGGTCGTTCGACGGTCTACAAAGCGCTGGCATCGTGA,MRLFGYARVSTSQQSLDVQINALKAENVSAARIFTDKVSGSHVNREGLKLLRLKVEEGDVVLVKKLDRLGRDTADMIQLIKEFDDMGVAIRFLDDGISTEGTMGKMVVTILSAVAQAERLRILERTNEGRLEAKAKGVKFGRKPKVNKADVFTLHDQGVSAMEIARQLKIGRSTVYKALAS,This gene assignment is based in part on its location adjacent to a Tn3 family transposase. ;,,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,PF00239PF02796,"Resolvase, Resolvase, N terminal domain. The N-terminal domain of the resolvase family (this family) contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase - see pfam02796..HTH_7, Helix-turn-helix domain of resolvase..",COG1961,"PinR, Site-specific recombinases, DNA invertase Pin homologs [DNA replication, recombination, and repair].","DNA replication, recombination, and repair",
NC_004633,Plasmid_pDC3000A,PSPTOA0012,NP_808672,29171488,Protein,16068,14914,HopX1,,type III effector HopX1,,,ATGAAAATACATAACGCTGGCCTAACCCCACCTTTGCCGGGCATTTCGAATGGAAACGTTGGAAAGGCGGCGCAATCATCAATAACTCAACCGCAGAGCCAGCAAGGCTCTTATGGCTTGCCACCAGAAAGCTCTGAGACTCGCCCTGATAGGGCGCGTGCGAACTATCCATATTCATCAGTACAAACACGGTTGCCGCCCGTTGCGTCTGCTGGGAAACCGCTGCCTGATACACCATCTTCTTTGCCCGGCTACTTACTGTTGCGAAGGCTGGACCATCGCCCTGTGGATCAGGAAGGTACCAAAAGTCTGATCCCGGCAGACAAGGCTGTGGCTGAAGCGCGCCGTGCATTGCCCTTTGGAAGAGGCAATATTGATGTGGATGCGCAACTTTCCAATCTGGAAAGTGGAGCCCGCACCCTTGCAGCAAGGTGCTTGAGAAAAGATGCCGAGGCCGCCGGTCATGAGCCTATGCCTGCGAATGAGCCGATGAACTGGCATGTTCTTGTTGCGATGTCAGGCCAGGTGTTCGGCGCGGGCAACTGTGGCGAACATGCTCGTATAGCGAGCTTCGCCTATGGAGCTTTGGCCCAGGAAAACGGACGATCTGAATATGAAAACATCTACTTGGCTGCATCGACTGAGGAAGATCATGTGTGGGCTGAAACCGACGAATCCCAGTCTGGCACCTCAACGATTGTCATGGATCCGTGGTCAAATGGTTCAGCCATATTTGCGGAGGACAGTAGGTTTGCGAAAAATCGAAATGCTGTAGAGCGTACGGATACGTTTAATCTTTCAACCGCAGCCGAAGCGGGCAAAATTACGCGTGAGACAGCCGAGAAGGCTTTGACGCAGGTCACAACCCGATTGCAGAAACGCCTGGCGGATCAGCAGGAGCAAGTCTCGCCCATCAAAAGTGGTCGCTATCGACCAGAAAAATCGGTACTTGATGATGCATTTGTCCGCAGAGTGAGCGACAAGTTGACCTCCCCTGATTTGCGGCGTGCACTACAGGTAGATATTGAAGCGGTCGGAGTCGCAATGTCGCTCGGCACCAAGGGCGTCAAGGACGCTACTCGACAAGCCCGACCTTTGGTTGAGCTTGCAGTGAAGGTCGCCTCTCCTCAAGGCTTGGCGAGACGAGATGTCTGA,MKIHNAGLTPPLPGISNGNVGKAAQSSITQPQSQQGSYGLPPESSETRPDRARANYPYSSVQTRLPPVASAGKPLPDTPSSLPGYLLLRRLDHRPVDQEGTKSLIPADKAVAEARRALPFGRGNIDVDAQLSNLESGARTLAARCLRKDAEAAGHEPMPANEPMNWHVLVAMSGQVFGAGNCGEHARIASFAYGALAQENGRSEYENIYLAASTEEDHVWAETDESQSGTSTIVMDPWSNGSAIFAEDSRFAKNRNAVERTDTFNLSTAAEAGKITRETAEKALTQVTTRLQKRLADQQEQVSPIKSGRYRPEKSVLDDAFVRRVSDKLTSPDLRRALQVDIEAVGVAMSLGTKGVKDATRQARPLVELAVKVASPQGLARRDV,Also known as AvrPphE ;,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0013,NP_808673,29171489,Protein,17354,16332,,,"ISPsy4, transposase",,,ATGTTGACCCAGGAGCAGTCTGTGGAAATTAAAGTGTTGGCCCGTCAGGGCCATGGCATCAAATTCATCGCCCGTGAGCTGGGTATTTCGCGTAACACCGTGCGCAAGTACCTGCGAAAGGCCCGGTCGCTACCCAGTGACAAGGTGAGACCCGCACGTCCGTGCAAAATCGACCCCTTCAAGGACTACCTGCACGAGCGTATTGAGGCGGCGCGCCCACACTGGATTCCGGCGACCGTCCTGCTGCGTGAGATCACGGCATTGGGGTACAGCGGCGGCGTCAGTCGTCTGAAGGCTTATATTCGCCCCTTCAAACGTAAGGCAGAAGAGCCGGTGGTACGTTTCGAGACACTGCCCGGCAAGCAGATACAGGTGGACTTCACCACCATTCGACGAGGCCGTCAGCCGCTTAAGGCGTTCGTGGCGACACTTGGTTTTAGTCGAGCAAGCTTTGTCCGTTTCTCCGAGCGAGAGGACAGCGAAGCCTGGCTGACAGGGCTTCGGGAGGCGTTCGCTTACTTTGGCGGCGTGCCCGAGCAGGCATTGTTTGATAACGCCGGAACCATCATCACCGAGCGAGATGCTTTTGGGGAGGGCCAGCACCGTTGGCATCCCCGATTGGCTGCGCTGGCCGATGAGTTTGGTTTTATTCCCAAGGTCTGCCGCCCTTACCGTGCCCAGACCAAGGGCAAGGTTGAGCGCTTCAACGGGTATCTGAAGGGCAGTTTCATTACCCCGTTGGCCGCTACGCTCAAGAGTGCGGGTCTGACGCTGGATGTGGTGACGGCCAACGCACATATCGGCCAATGGCTCGACGAAGTCGCTCATCAGCGGATTCACGGCACGACGGGTGTTCAACCGGCGGTACGTCTGGCCCAAGAGCAGCAGGTACTATTACCACTGCCAACACAGAGCCTGCGCCCACAACCCGCCCAAGGCCTACGCCTGGGACGGGTCCTGCCGTACGAGAGCTTGCAGCATCCGCTGTCGGTTTATGAGCAACTGCTGGAGGTGAGAGCATGA,MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSLPSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIRPFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDSEAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIPKVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAHQRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQLLEVRA,"The annotation of this disrupted copy of a multicopy IS21 family element is based in part on an HMM match, the ISFinder database, and on positional information. ;",,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,PF00665,"rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyses the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site..",COG4584,"COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].","DNA replication, recombination, and repair",
NC_004633,Plasmid_pDC3000A,PSPTOA0014,NP_808674,29171490,Protein,17627,18256,,,"ATPase, ParA family",,,ATGCGAGTCATTGCGGTGTTGAACCAGAAAGGCGGCTCAGGGAAAACGACAATCGCCACGCACCTGACGCGCGCTTTCCAGTTGGATGGGTCCAGTGTGCTGCTGGTGGATTCAGACCCCCAGGGAAGCGCTCGTGATTGGGCAGCGGTGCTTGATGACAACCCTGTGACGGTTGTTGGTATCGACCGCCCTACCATCGACCGCGATCTAAAGGCGATCGGGCACAAAGATATTGTTGTTATCGATGGGGCACCCCAGGCAGCAGACTTGGCTATCTCAGCCATCAAAGCTGCCTCCTTTATTTTGATCCCAGTGCAACCGAGCCCGTATGACATTTGGGCTACAGCAGACCTCGTGGATTTGGTTAAACAGCGCATAGAAGTAACGGATGGTGCCTTGCAGGCAGCATTTGTCGTGTCGCGTGCAATCAAGGGTACGCGGATAGGTGCAGAGATTTCGGAAGCGTTGGCCGGCTATGGCCTCCCTGTACTGGAGTCGCGCATCACTCAGCGTGTGAGCTACCCAGGCACTGCCGCTCAAGGCACGACCATTCTCGATAGCGATCCAGAAAGTGACGGTGCGAAGGAAATTCGCGCGCTGATGACCGAGATAAAACAAAAACTTTTTTGA,MRVIAVLNQKGGSGKTTIATHLTRAFQLDGSSVLLVDSDPQGSARDWAAVLDDNPVTVVGIDRPTIDRDLKAIGHKDIVVIDGAPQAADLAISAIKAASFILIPVQPSPYDIWATADLVDLVKQRIEVTDGALQAAFVVSRAIKGTRIGAEISEALAGYGLPVLESRITQRVSYPGTAAQGTTILDSDPESDGAKEIRALMTEIKQKLF,similar to GP:8117184 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,PF01656,"CbiA, CobQ/CobB/MinD/ParA nucleotide binding domain. This family consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from S.typhimurium, and CobQ from R. capsulatus. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria. The family also contains dethiobiotin synthetases as well as the plasmid partitioning proteins of the MinD/ParA family..",COG1192,"Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].",Cell division and chromosome partitioning,
NC_004633,Plasmid_pDC3000A,PSPTOA0015,NP_808675,29171491,Protein,18277,18495,,,"plasmid partition protein ParB, truncated",,,ATGAGTGAAAAATTAAAAGGTGCTTTGAGTGCCGGCCGGCCAAGCGCGCGAAGCTCGAAGGCAACCACCTTGGCAAGCTTGGCTGATAAGCCTGCGACGGTTCGAGTCAATTTTGACCTGGATCGGGAGCAACACATGAAGCTAAAGCTTTATGCGACGAAGCAGGGAAGGAGTATCAAAGAGGTATTGAGCGATTTTGTGGCCCAACTACCTGATTAG,MSEKLKGALSAGRPSARSSKATTLASLADKPATVRVNFDLDREQHMKLKLYATKQGRSIKEVLSDFVAQLPD,"similar to GP:8117185,  and GP:5123481 ;",,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0017,NP_808676,29171492,Protein,19718,20146,shc01,,type III chaperone ShcO1,,,ATGCGCACATCCGTTAATGGTCTGCTTGAGCACAGCCTGAAGACCCTGGGCTTTGATACTTCGGCATTGCAGGCCTTGCGCGACGACGGTTATTTACTGTGGCAAGGCAAGGATAAGCAAGCCAGTCTTCTGGTTCCCTCTACTGACGGCGACGCGCTTTTCGCTATCTGTACCTTGAGCCGTGTCGATCCCGAGCACGACGGACGTCTGCTGGCGCTTGCATTGCACCTGAACCTGTCTCCTGTCCACACGATGAGCGCATGTATAGCACTTGATGTCGAGCAAAACACGTTGTGTCTTCGCTACACCCATGACCTTGGCGGGAACGGGGCAGATACCCTGTTGCTTGCGCTCGAAAACGCCCAAGCGCTTGCTGAACAGATCAAGCAGGTAATCGAAAACTTTAGGCACGATCAGGGACGCCGATAG,MRTSVNGLLEHSLKTLGFDTSALQALRDDGYLLWQGKDKQASLLVPSTDGDALFAICTLSRVDPEHDGRLLALALHLNLSPVHTMSACIALDVEQNTLCLRYTHDLGGNGADTLLLALENAQALAEQIKQVIENFRHDQGRR,identified by Glimmer2 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0018,NP_808677,29171493,Protein,20399,21250,hopO1-1,,type III effector HopO1-1,,,ATGGGTAATATTTGTGGTACTTCTGGCTCCAATCATGTGTATAGTCCGCCTATTAGCCCTCAACATGCATCTGGTTCGTCCACACCAGTGCCCAGTGCTTCTGGGACGATGCTTTCTCTCAGTCATGAACAAATATTAAGCCAGAACTATGCTAGCAATATAAAGGGGAAATATCGCACGAACCCCCGAAAAGGACCATCTCCTAGGCTTTCTGATACGCTGATGAAGCAGGCGCTGTCTTCAGTGATCACACAAGAGAAAAAGCGACTTAAAAGTCAACCAAAGTCAATAGCCCAAGATATTCAGCCTCCAAACAGCATGATCAAAAATGCACTTGATGAAAAAGACAGCCACCCTTTTGGTGATTGCTTTTCAGACGATGAATTTCTTGCGATCCATCTCTATACGAGTTGTCTTTACAGACCGATCAACCATCATCTGCGGTATGCCCCGAAAAATGATGTCGCGCCTGTTGTCGAGGCAATGAATAGCGGTTTGGCCAAACTTGCTCAATACCCTGATTATCAGGTGTCTGGTCAGCTGCATAGAGGCATCAAGCAAAAGATGGATGATGGTGAAGTTATGAGTCGCTTCAAGCCGGGTAATACTTATCGTGATGACGCGTTCATGAGCACATCGACTAGAATGGATGTTACAGAAGAATTTACTTCCGATGTCACGTTACATCTGCAGTCCTCATCAGCCGTCAATATAGGTCCCTTTTCAAAAAACCCATACGAGGACGAAGCGCTCATCCCGCCCCTGACGCCTTTCAAAGTAACCGGTCTGCACAAGCAGGACGATAGGTGGCACGTCCACTTGAACGAGATCGCAGAGAGCTCTGACGAGTGA,MGNICGTSGSNHVYSPPISPQHASGSSTPVPSASGTMLSLSHEQILSQNYASNIKGKYRTNPRKGPSPRLSDTLMKQALSSVITQEKKRLKSQPKSIAQDIQPPNSMIKNALDEKDSHPFGDCFSDDEFLAIHLYTSCLYRPINHHLRYAPKNDVAPVVEAMNSGLAKLAQYPDYQVSGQLHRGIKQKMDDGEVMSRFKPGNTYRDDAFMSTSTRMDVTEEFTSDVTLHLQSSSAVNIGPFSKNPYEDEALIPPLTPFKVTGLHKQDDRWHVHLNEIAESSDE,Previously known as HopPtoO (PMID 11872842 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,PF01129,"ART, NAD:arginine ADP-ribosyltransferase..",,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0019,NP_808678,29171494,Protein,21259,22395,hopT1-1,,type III effector HopT1-1,,,ATGAAAACAGTCAGCAATCACTCGATACCCAGTACAAATCTCGTCGTGGATGCGGGAACGGAAACTTCGGCGCAGAAATCCCAGCCGGTTTGCAGCGAAATCCAGCGTAACAGCAAGATCGAAAAAGCAGTCATCGAACACATTGCCGACCACCCGGCAGCGAAAATGACAATAAGCGCGCTGGTTGACACGTTGACAGACGTTTTTGTCAGGGCTCATGGGGAGGTTAAGGGGTGGGCCGAAATCGTCCAGGCAGTCTCTCGCCCTCATGACAGTAATCGACACGGCAGTGGAGTGCTCAGCCCGCGCTTTGATGTAATGGGGAGTGTTGGTTGGAATGCGGCAGCTATCCGGGCCACCAGTCGCGTCGGGACGCTTCGAGAGAAAGGTACACTGTTCACTAACCTTATGCTCAGTAACAACTTTAAACATTTGCTTAAACGAGTGGTTAACGATCCAGCCTTGCAGCAAAAGCTCGACGGTGGGTTAGACCTCAACTATCTGAAGGCTTGTGAAGGCGATCTTTATGTCATGTCAGGGTGGGCTGCACGGGCTAGCGAAAGTCGTGAACAAATTGGCAAAGCCCGGTATGAAACGGCATCAAATCTTAGCCAGACGCTGATCAGTGCACGTGAGTTGGCTTTTCATCGTCACAATCCGGTTAATCATCCGTCTGCCCAAACGAAAGTGGGCTTCGATAAGGGTTTGCCTGAGGAATCTGATCTGCAGGTTCTGAGAGGCCATGGCAGCAGTGTATGGAGTGTAAAACCGGGCAGCGATTTCGCAAAGCGTGCTGAAGTTTCTGGAAAGCCTATTATCGCCGGCCCGTCCGGTACCGCTTCGCGCATGGTCGCTGTTGCGCGTTTTCTGGCACCGGCTTGTTTGAAAAGCCTGGGTATTGAGAGTGAGCAGAACCTGAAAGAGCTTGTGCGGTATGCCTGCTATGCCTATTTCGGTCAGGACAGCCACCATTCGATGCTTGAAGTGAATCTTGGTGTCGCTTCCCATGGAATGCCGGAACAATGGGACGACACGCTTTATAACGAGCCTTTCAGTAATTCAATTAAAGGTCGCGGGTTTGGTATAGACAATCTCGCGCATAGGCAAGTCGTCAGGCAGGCGGCTCAAAAGTCATGA,MKTVSNHSIPSTNLVVDAGTETSAQKSQPVCSEIQRNSKIEKAVIEHIADHPAAKMTISALVDTLTDVFVRAHGEVKGWAEIVQAVSRPHDSNRHGSGVLSPRFDVMGSVGWNAAAIRATSRVGTLREKGTLFTNLMLSNNFKHLLKRVVNDPALQQKLDGGLDLNYLKACEGDLYVMSGWAARASESREQIGKARYETASNLSQTLISARELAFHRHNPVNHPSAQTKVGFDKGLPEESDLQVLRGHGSSVWSVKPGSDFAKRAEVSGKPIIAGPSGTASRMVAVARFLAPACLKSLGIESEQNLKELVRYACYAYFGQDSHHSMLEVNLGVASHGMPEQWDDTLYNEPFSNSIKGRGFGIDNLAHRQVVRQAAQKS,Previously known as ORF16 (PMID 12032338 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0021,NP_808679,29171495,Protein,23956,23291,,,"resolvase, putative",,,TTGATACAATCATTTGACTACACCCAAAATGAGACGGATCTACTGATGTTCATTCGTGCATACCTTCGAGCATCGACCGATGACCAGGACGCAAGTCGAGCGCGCGATTATTTGGAAACGTTTGTCTCCGGCTACGGCAAGGCCATCGCATCGTGCTACATGGAAAATGCCAGTGGCAGCCATGCCGACCGCCCGGAATTAATCCGACTACTCAAAGATGCTCGCCGAGGTGACGTGCTGCTGGTGGAAAGCATCGATCGGCTGTCGCGAATGGATGACCAGGCTTGGCGATCCCTCAAAACAGCAATCGATAACCGAGGCATACGGATCGTCTCTGTGGATCTGCCTACCAGTCATCAAGGCATGACGGCCCAGTCGGGGGACGAGTTCACCGACCGCATGCTGGCGGCCATCAACTACATGATGATCGATATGATGGCCGCGATTGCCAGGAAGGACTATCAGCAAAGAAGACTGCGCCAGGCACAAGGGATTGAGAAGGCAAAAGCTTCAGGCGTCTACAAAGGCAGACCCGTAGACGCAGAGCTGCGTAACCGAGTGCGTGAGCTGCTGGCTGCAGGTCTCGGGATCCGCGCAGTAGCGAGGCACGCTGCGTGTTCAACTACGACCGTCATGAAGGTCCGCGACGAGCTGGCGCAACGTTAG,MIQSFDYTQNETDLLMFIRAYLRASTDDQDASRARDYLETFVSGYGKAIASCYMENASGSHADRPELIRLLKDARRGDVLLVESIDRLSRMDDQAWRSLKTAIDNRGIRIVSVDLPTSHQGMTAQSGDEFTDRMLAAINYMMIDMMAAIARKDYQQRRLRQAQGIEKAKASGVYKGRPVDAELRNRVRELLAAGLGIRAVARHAACSTTTVMKVRDELAQR,"similar to GP:18077101,  and SP:P22996 ;",,,,,,,,Unknown,Class 3,,,,,,,,,,PF00239,"Resolvase, Resolvase, N terminal domain. The N-terminal domain of the resolvase family (this family) contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase - see pfam02796..",COG1961,"PinR, Site-specific recombinases, DNA invertase Pin homologs [DNA replication, recombination, and repair].","DNA replication, recombination, and repair"
NC_004633,Plasmid_pDC3000A,PSPTOA0022,NP_808680,29171496,Protein,24081,24662,,,hypothetical protein,,,GTGCGCCATTTTGAACACACCCTCCCTGTGCTCAGGACTGGTCTTTTGGCCGCACCTGAAGCCTACAACTGTGTCTTCATACAGGTTACATGTGGTTGCAGTTACGGTAGATTCGACTTTCATCAACCTGGACCTACCACCATGACTGTCGATCCTGACCCGCTTGGTCTTGCAACAAAGATCATCCAACACTACAGCAACGCCCAGATCGCCCAGTTGATCAGGATTATTAGTCCAGTTTCTCCCTGCGCCCTAATGACCGCAGAGGAGTTTGAGCGAGTCATGGTCGTACTTGCCGGCCAGAATCGACGACGAGCGTTCTCCGATCGTTCGATAAATGCTGCCAGGCTTGTCCTGGTTATGGGTGCCAGCGTGTCCGAAGCGGCTTTGGAAACTGGATTGGCCAGGCAGGTGGTTCACAGACTCATGACACGTATTCGGTCGCGCCTGGAGGGTTTGCCGGCTAATTGGGTAAAGGTCGAAGCCTGGCTGCCCCCTGCAACTGCAGGCGATGTTCTGGCATTAGCTCAATCACTCAGATCTGCTCAATCGCAGGAGGAGAGGAGTGGCCTGGCTGTTTGA,MRHFEHTLPVLRTGLLAAPEAYNCVFIQVTCGCSYGRFDFHQPGPTTMTVDPDPLGLATKIIQHYSNAQIAQLIRIISPVSPCALMTAEEFERVMVVLAGQNRRRAFSDRSINAARLVLVMGASVSEAALETGLARQVVHRLMTRIRSRLEGLPANWVKVEAWLPPATAGDVLALAQSLRSAQSQEERSGLAV,identified by Glimmer2 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0023,NP_808681,29171497,Protein,24962,24612,,,hypothetical protein,,,GTGTCGCGGGCGCAGCCGAACCCTTGTCAGGTGCCGCGCTCGATCTACCGTCAAGCGCACGGCGAAAGGTGCGCAGCAAAGCCTGCAGGTGATACGGGAAGTACAGGCAGCGACGGCAAGCGGAGCGCGCAGGCCGAGAGGCCGGAGGCGTTAGAGCCGGCTTGCCGGCGAGGATTGAAGCCCGAAGGGGCGAGACGGGCCGGCTTCATGGCCTGGCTCGATGCGCAGCACGAAAGCCCGGCCCTGAGCGCAGCGAAGGGAACGCACGTCAGAGGTTGTCAAATCGAACTGCACCGAGGCTCAAACAGCCAGGCCACTCCTCTCCTCCTGCGATTGAGCAGATCTGAGTGA,MSRAQPNPCQVPRSIYRQAHGERCAAKPAGDTGSTGSDGKRSAQAERPEALEPACRRGLKPEGARRAGFMAWLDAQHESPALSAAKGTHVRGCQIELHRGSNSQATPLLLRLSRSE,identified by Glimmer2 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0024,NP_808682,29171498,Protein,25096,25473,,,hypothetical protein,,,ATGAACAGACAAGCAAAGCAACAGCTGATGAAGCGCTTCACAAGCGGTCAGGTCGAGATCTGCAAAAAGCTGCTGAAACTGAGTCGCCAGGTACACAAGTTCAATGCCCGCGTCGAGTTCCTGGTGCTGACGTTCAAGCATGACCTGGCAGACGCCGTAGTCCGGTATGAACTTTGGGACAACGGTTTCGAAGGCCTGGGCGAACGCCAGTTCGACAACTGCTTTGAAATGGGTGACTCGGCCGAGGTGATCGCCGAACTAATCACCACAGCGCGTCGTGAAGGCTTCGTGGAAAAAATTCAGACCTGGTGCGGCAACGAATCGTTTGCCCGCTGGTGCAGCTACGCCGACCGCCAGGGCGACCTTTTCGCCGCTTAA,MNRQAKQQLMKRFTSGQVEICKKLLKLSRQVHKFNARVEFLVLTFKHDLADAVVRYELWDNGFEGLGERQFDNCFEMGDSAEVIAELITTARREGFVEKIQTWCGNESFARWCSYADRQGDLFAA,identified by Glimmer2 ;,,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0025,NP_808683,29171499,Protein,25520,26356,,,hypothetical protein,,,ATGCGTATGTCCAGCAACTTCCGTAACCCATGCATGATCCGCAGTGACGTCCCACTGAGCAACGATCAGATCGCCCACTATGTGCCTTCCATCTTTGCCGAAGAAGCGCACGACAGCAGGTCGGCACGTTATCTGTATATCCCGACCGTGCAGGTACTTGATGCGCTGCGCGCCGAAGGATTTGAACCATTCATGGCCTGTCAGACACGCGTGCGTGACCAGGGCAAACGTGAGCACACCAAGCACATGCTGCGCTTGCGCCATGCGAGCCAGATCCTGGACCAGGAAGCCAACGAAATCATCCTTCTCAACAGCCACGATGGCAGCAGCAGCTATCAAATGATTGGAGGCAAATTCCGTTTCGTGTGTGCAAACGGACTGGTACTGGGGGACGTTGCCGCTGACCAGAAAGTGCGCCATAGCGGCCGTGGTGATGTGGTAAATGACGTGATCGAAGGCGCCTTCGAAGTGTTGAAGCATTTCGAACAGATCGACCACATAACCGCCGACATGAAGCATCAACAATTAGACCAGGACGAGCAAGAGGCCTTTGCATTGGCTGCCTTGGCGTATCGCTACGATCCGGCAGAAGGACCTGCGCCTGTTACCCCGTCCCAGTTGCTCATGCCCCGCCGTCGTGAGGACCGCAGCAGCGACCTTTGGACCACGTTCAATCGAGTCCAGGAAAACACCATAAAAGGCGGTTTGACCGGGCGCAACAAGCAAGGCCGACGCACGACAACGAGGGCAGTTAATGGCATTGATCAGGATGTGAAATTGAATCGCGCACTGTGGGTGCTCGCACAGGCTCTGCAAGGCCGTCAGCTCGCCGCCTAA,MRMSSNFRNPCMIRSDVPLSNDQIAHYVPSIFAEEAHDSRSARYLYIPTVQVLDALRAEGFEPFMACQTRVRDQGKREHTKHMLRLRHASQILDQEANEIILLNSHDGSSSYQMIGGKFRFVCANGLVLGDVAADQKVRHSGRGDVVNDVIEGAFEVLKHFEQIDHITADMKHQQLDQDEQEAFALAALAYRYDPAEGPAPVTPSQLLMPRRREDRSSDLWTTFNRVQENTIKGGLTGRNKQGRRTTTRAVNGIDQDVKLNRALWVLAQALQGRQLAA,"similar to GP:18077130,  and GP:18077130 ;",,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,PF06067,"DUF932, Domain of unknown function (DUF932). Family of Proteobacteria proteins with unknown function..",,,
NC_004633,Plasmid_pDC3000A,PSPTOA0026,NP_808684,29171500,Protein,26414,26602,,,hypothetical protein,,,ATGGGCCCCTATATCGTAACCTGGACCATGTACAGCGAAAACCCCGGCGACCACAAGGCAGCCGCCCAGGAAGTAGCGGAGCTATATTTTCAAGAACGGATTGCAGCAGGAGAGCCCGATACGGCTTGTACGTTCGTTGTAACAAACAGCAAAGGCGAATCGAAACAAATCGACCTAGCAGCGCATTAG,MGPYIVTWTMYSENPGDHKAAAQEVAELYFQERIAAGEPDTACTFVVTNSKGESKQIDLAAH,similar to GP:18077120 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0027,NP_808685,29171501,Protein,26954,26676,,,"mobilization protein MobC, putative",,,ATGGCGAAGCAAAAGACGTTCACCCAAAAAGAGTTGGAAGCCGCACGCCAGAAACTCGCTGAGCTTCCAGACCTGAGCCAGGACAAGCTGAGCCAGGCGGAAGTGCTTCAATCACTGAAAGCGGAAATAGTTGAGCTATGCACTGCGAAGGGCTACACAGTCACCGAGGTCAAGCAAGCGCTCGCTGACGTGGGCATGAATGTGACTGCCAAGGAAATTACTGAATTGACGTCTTCTCGCAAACGCGCAGCCCCTCGTGTTAAAGCGCAGACGGCTTGA,MAKQKTFTQKELEAARQKLAELPDLSQDKLSQAEVLQSLKAEIVELCTAKGYTVTEVKQALADVGMNVTAKEITELTSSRKRAAPRVKAQTA,"similar to GP:5123487,  and GP:5123487 ;",,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0028,NP_808686,29171502,Protein,27399,27728,,,"mobilization protein MobB, putative",,,ATGTCGAAAAGCACAGCGCGTCAAGCAACGGTGAGGATCGAAATTCGTTGCACTGAAGAGGATGCGGCCTTGATTCGCGAAAAAGCGCTGGCTGCCGAGATATCTGTTTCAGATCTGATGCGTCGTGCTGCGCTGAATCGCAAAATCAAGACACCGACTGACAAGAAGCTAATGGCCGCGTTGCTACAGCTGGGTGGCTTGCAAAAGCATTTGTTCAACCAGATGCAGGACAGCATGACAACTGATCTTAGCAAGCAATTTTCTGACGTGTTGGTCGCCATCCGAAATGCCGTCAATGCCATCGATCTGTCCCAGACTCGCATCAAGTAG,MSKSTARQATVRIEIRCTEEDAALIREKALAAEISVSDLMRRAALNRKIKTPTDKKLMAALLQLGGLQKHLFNQMQDSMTTDLSKQFSDVLVAIRNAVNAIDLSQTRIK,"similar to GP:5123486,  and GP:5123486 ;",,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0029,NP_808687,29171503,Protein,27739,29691,,,"relaxase/mobilization nuclease MobA, putative",,,ATGAACGTCATCATCCCCCCGAAACGCGGCGATAAGGGCTCCAGCTTTAACCGGCTGGTGAGCTATATCAGCGACCGTGGTGACAAGCCCAAAGATGATGATCTAGTCAGCGCTGCGCCTCGCCAGAATGCTTCGCGCACCAAGAAGGCGATGTTTGATCGGCTTGTCGATTATGCGGATCGAAATGATGGAGACGACCGTGCCGTCGTGATCACCGACGTGTTCCCCGATGGCCGTCAGCGCTTGATCAGTGGGGGCATTTCTTGCGAGACAAACTGCTTCTCCTGGGAGACATCGGCCGCGGAAATGAACATGGTTGCCGCCCAAAGTCGTCGCTGCCAGGACCCGGTCTATCACTTCATCTTGTCGTGGCGCGAAAACGAACTGCCTACTGATGCGCAGATATTCGAATGCGCCGAACACTGCATTCGTCAGCTGGGCATGGAAGGGCATCAGTACGTCACCGCTATTCACCAAGACACAGACAATACGCACTGTCATGTGGCGGTGAACCGAGTCAATCCCATTACCTACAAAGCCGCCGCCTTGTGGAATGATGCTGACACGTTGCAGAAAAGCTGCCGAGTCCTCGAACGCAAATACGGATTCATTCAGGACAATGGGAGTTGGCAGTGGGGTGTCAACGACCAATTGGTCCGTGCTCCTTTTCGGTATGGCAGTGCTCCGCAAGGGACTGTGCCATTGCAGGTCTATTCAAACACCGAGAGTCTCTATCATTACGCCGTGCGTGAGGTGCGCGAAAAGATATCTGAGCTTATCGAATCGCGAGAGATTACCTGGCGTCAAATCCATCTGGCCCTGCATGAACGTGGCTTGGGATTGAGGGAGCAAGGCGAAGGTTTGGTGATCTATGATTTCTTGCGCCCCGAGGGTCCTGTGGTCAAGGCTTCTTCGGTTCATCCGACGCTGACCAAGTTTCGATTGGAGGCCCACATAGGCCCGTTTGAAGGACCACCCACCTTCGAACATGAAGAATGGAGCTATGGTATTTCTTCCTATTACCAGCCTGCATTTGAACTCCGAGATAAAGACGTGCGTTTCGATCGCCGGCAGGCGAGAGCTGAGGCTCGGCTGGACTTAAAAATGCGCTACAAACGCTATCGTGAGGGATGGGAAAAACCTGATCTTCATGTCAAGGATCGATACCAGCAAGTGGCTGCTCGCTACCAGGCAATGAAGGCGGACGTCAAACGCTCTCAGCACGATCCTTTGCTTCGCAAGTTGCTGTATCGAGTTGCCGAGTTCGACCGGATGAAAGCCATGGCTGAGTTGCGCATCGAGCTTCGTGATGAGCGGCAAGCGCTTGCCGAAAAGGGCTTGCTTCGTCCGCTTGCATACCGTCCCTGGGTCGAGCAGCAAGCTCTCAGAGGGGACGTTGCGGCGGTCAGTCAACTGCGTGGATTTGTGTATCGAGAAAAGCGGAAGGAGCGCACTCCGGACGGTGGGTTTGATCGTCTTATCCAGTGCGGCCAGGCAGATGATTCTGCTGTCTATCACCTGCGCTCTTACACGTCACATTTGCATCGTGACGGCACTGTCGAATATCTGCGCGATGGCAGGGCGGGTGTGATCGACCGTGGCGATTTCGTCCACGTAAAACCGGGGTTCAATGACGACGATGAGTTGGACAATTATCGGCTGGCCGCCAACCTGGTATCCACGAAAAGCGGTGACGCTGTGAGGATCATTGGTGATGACCAGTTCGTAGACCAGGTGCTTGATGCGGGATGTGGCGTCAACCATCGCGGAAGTCAGTATGTGTTCCAAGTGACCGATCCAGAACAGTTGGCGCGCTACGACGTGATCGAGAGGGATCACCGTCAGTATTACGGATACGACGAGCCGTCCCGTCCCCAGTCCCCCGTACGTCATGATCCGGTGGATGATGCTCCGGATGATGGTTACCAGCCTCCAAGACCATTTGGCGGTTGA,MNVIIPPKRGDKGSSFNRLVSYISDRGDKPKDDDLVSAAPRQNASRTKKAMFDRLVDYADRNDGDDRAVVITDVFPDGRQRLISGGISCETNCFSWETSAAEMNMVAAQSRRCQDPVYHFILSWRENELPTDAQIFECAEHCIRQLGMEGHQYVTAIHQDTDNTHCHVAVNRVNPITYKAAALWNDADTLQKSCRVLERKYGFIQDNGSWQWGVNDQLVRAPFRYGSAPQGTVPLQVYSNTESLYHYAVREVREKISELIESREITWRQIHLALHERGLGLREQGEGLVIYDFLRPEGPVVKASSVHPTLTKFRLEAHIGPFEGPPTFEHEEWSYGISSYYQPAFELRDKDVRFDRRQARAEARLDLKMRYKRYREGWEKPDLHVKDRYQQVAARYQAMKADVKRSQHDPLLRKLLYRVAEFDRMKAMAELRIELRDERQALAEKGLLRPLAYRPWVEQQALRGDVAAVSQLRGFVYREKRKERTPDGGFDRLIQCGQADDSAVYHLRSYTSHLHRDGTVEYLRDGRAGVIDRGDFVHVKPGFNDDDELDNYRLAANLVSTKSGDAVRIIGDDQFVDQVLDAGCGVNHRGSQYVFQVTDPEQLARYDVIERDHRQYYGYDEPSRPQSPVRHDPVDDAPDDGYQPPRPFGG,"similar to SP:P22899,  and GP:5123485 ;",,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,PF03432,"Relaxase, Relaxase/Mobilisation nuclease domain. Relaxases/mobilisation proteins are required for the horizontal transfer of genetic information contained on plasmids that occurs during bacterial conjugation. The relaxase, in conjunction with several auxiliary proteins, forms the relaxation complex or relaxosome. Relaxases nick duplex DNA in a specific manner by catalysing trans-esterification..",,,
NC_004633,Plasmid_pDC3000A,PSPTOA0030,NP_808688,29171504,Protein,30841,30218,,,"glycosyl hydrolase, family 25",,,ATGAGCACAATTAAGAAAGGTATTGATCTATCGCATTTTCAAGGTGATATTGATTTTAAAAAAGTTTTTGAGGCTGGCATTGAGTATGCCTTTATCAAGACAACAGAAGGCGCTACCGTACAGGACAATAAATACACTACGTATCGTACTGACGCTAGAGCCGTCGGAATTAAAACGGGGGCATATCATTACTTTCGTGCGCTCAGCAGCTCGCCGGAAGCACAACGAGATAACATAGTTAGTACACTTACTGCTGCCGGCTTCGATGCATCTACTGAGTTTTTTGCAATCGATGCGGAGCTCGAAGGTAACGAAAAAGCTACCCCGGACGAAATGGCTGACAACCTTCATAAACTGCTAACTTTATTGGATAACGAAAAAATCCTAAAGAGCCAAAAATCATTTATATATTGCGATAATAACTTCTGGATGAATCATATTTTAGGAGAAAAATATGCATTTAGTGAATACCCTCTTTGGATCGCTAATTGGGATGTCAGTGAACCTAAAGTTCCAGCTTCATGGGAGGTAGCAGGTAAAAGCTGGTCAATTTGGCAGCACAGTAACAAAGGTCGCATCGCGGGCATTGAGGTTGATGTAGATCTTAATTGGGTTCGTACTTGA,MSTIKKGIDLSHFQGDIDFKKVFEAGIEYAFIKTTEGATVQDNKYTTYRTDARAVGIKTGAYHYFRALSSSPEAQRDNIVSTLTAAGFDASTEFFAIDAELEGNEKATPDEMADNLHKLLTLLDNEKILKSQKSFIYCDNNFWMNHILGEKYAFSEYPLWIANWDVSEPKVPASWEVAGKSWSIWQHSNKGRIAGIEVDVDLNWVRT,identified by match to PFAM protein family HMM PF01183 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,PF01183,"Glyco_hydro_25, Glycosyl hydrolases family 25..",COG3757,"Acm, Lyzozyme M1 (1,4-beta-N-acetylmuramidase) [Cell envelope biogenesis, outer membrane].","Cell envelope biogenesis, outer membrane"
NC_004633,Plasmid_pDC3000A,PSPTOA0031,NP_808689,29171505,Protein,32828,31647,,,hypothetical protein,,,ATGGCAACTGCGAACAAAAACCTCAAGGCGACTTGGGTCGCGACAGTTACGAATCTTGACTGGCCGTCAGTCTCATCTGTGGCCATCACTGATGAGGCTGCACGTGTCAGTAAACAGAAAGAAGAATTGACCGGCATTCTTGATGAAATTGTGGCAATGAAAATGAATGCCGTCATATTCCAGGTTGTTCCCTGCGCAGATGCATTCTATGCATCAGACCTGCTTCCGTGGTCGAAGTACCTGACGGGTACGCTCGGGAAGAATCCCGGCTTCGACCCACTGGCTTATGCTATCGAGCAGGCACATGCTCGCAATATTGAGCTGCACGCATGGGTGAACCCGTACCGCGTATCAATGAACGCCAGCGATGCCACAATCGAAGAGCTGAACAACTCATCATCTGACTCACCGGCCAGTGTGTTTAAAACACATCCTGAATGGACGGGAACCGCAGCGAACCGCTTTGTTCTCAACCCCGGGATACCTGAAGTTCAGACGTGGGTTAGTAATATTGTTGAAGAAATTGTCACTAAATACGATGTTGATGCCATTCAATTCGATGATTATTTTTATTATGAAACTGCCAGCTCGCTGCTGCAGGACGATGCCACCTATCAGAAATACAATACGAACTTTACCACGAAGGCCGACTGGCGGCGGAATAACACTTATTCGCTGGTTGATACATGCCATAAAAAAATAGCCGCCGTAAAAGCGAATGTCTTGTTTGGCGTCAGCCCGGCAGGCGTCTGGCGGAATAAATCTGACGACCCGCTGGGGTCTGATACGCAGGCCGGTGCGTCTAATTACGATTTCGCGTATGCAGACACACGGAAATGGGTCATTGACGGCATCATTGATTATATCGCCCCGCAGGTATACTGGCCGTTTGCTCGTGAGGTTGCGCGTTATGATGTCATCACACAGTGGTGGGCGGATACCGTCAGCGGAACTGGCACAGCGTTATATATTGGTATGGCTCTGTATAAAGTGGGAACGGCATCAGAAACCGAGCCCGACTGGACTGTCGAGGGGGGCGTGCCTGAAATTACCCGTCAGCTTGACCTGAATGATTCTCTGACTGAGGTTTCCGGGTGCATGTTATTTCGACATATGTTTCTGCGGGCCTCACAGACTCAGCAGGTGGTCGACTACCTGAAGCTTCGCTGGGCTGACGTCTAA,MATANKNLKATWVATVTNLDWPSVSSVAITDEAARVSKQKEELTGILDEIVAMKMNAVIFQVVPCADAFYASDLLPWSKYLTGTLGKNPGFDPLAYAIEQAHARNIELHAWVNPYRVSMNASDATIEELNNSSSDSPASVFKTHPEWTGTAANRFVLNPGIPEVQTWVSNIVEEIVTKYDVDAIQFDDYFYYETASSLLQDDATYQKYNTNFTTKADWRRNNTYSLVDTCHKKIAAVKANVLFGVSPAGVWRNKSDDPLGSDTQAGASNYDFAYADTRKWVIDGIIDYIAPQVYWPFAREVARYDVITQWWADTVSGTGTALYIGMALYKVGTASETEPDWTVEGGVPEITRQLDLNDSLTEVSGCMLFRHMFLRASQTQQVVDYLKLRWADV,"similar to GP:17431229,  and GP:17982579 ;",,,,,,,,Unknown,Class 3,,,,,,,,,,PF02638,"DUF187, Uncharacterised BCR, COG1649..",COG1649,"COG1649, Uncharacterized protein conserved in bacteria [Function unknown].",Function unknown
NC_004633,Plasmid_pDC3000A,PSPTOA0032,NP_808690,29171506,Protein,34203,32908,lsc-3,,levansucrase,,,ATGTACAATAGCAACTCTGCTGTAAGCCAGCTCCAAAATAGTCCTCTCGTAGATAACATCAAATACCCACCTACTGTCTGGTCCCGCGCCGATGCGCTGAAGGTCAATGAAAATGACCCGACCACGACGCAGCCACTGGTCAGTGCGGACTTTCCGGTCATGAGTGATACGGTATTCATCTGGGACACCATGCCGCTGCGAGAGCTCGACGGCACGGTGGTTTCGGTCAACGGCTGGTCAGTGATCATCACCCTGACGGCGGACCGCCATCCTGACGACCCTCAGTACCTGGGGCCCGACGGTCGCTATGACATCAAGCGTGACTGGGAAGATCGACATGGCCGCGCACGCATGTGCTACTGGTACTCGCGTACCGGCAAGGACTGGATTTTTGGTGGTCGTGTAATGGCCGAGGGGGTATCGCCCACCACTCGAGAGTGGGCGGGCACACCCATACTGTTGAATGACAAAGGCGATATTGATCTCTATTACACCTGCGTCACGCCCGGCGCAGCGATCGCCAAAGTACGTGGCCGTATTGTGACGTCCGATCAGGGCGTGGAGTTGAAAGACTTTACCCAGGTCAAAAAACTGTTTGAGGCCGACGGCACCTATTATCAAACCGAAGCGCAGAACTCAAGCTGGAACTTTCGCGACCCCAGTCCGTTCATTGATCCTAATGATGGCAAGTTGTATATGGTGTTTGAAGGCAATGTCGCCGGTGAACGCGGTTCGCACACAGTAGGGGTTGCCGAACTTGGCCCTGTGCCACCGGGTCACGAAGACGTGGGGGGTGCCAGATTCCAGGTGGGTTGTATCGGTCTGGCGGTTGCAAAAGATCTCAGTGGCGAAGAGTGGGAAATACTTCCGCCATTGGTGACTGCCGTCGGCGTGAATGATCAGACCGAGCGCCCGCACTATGTTTTTCAAGACGGCAAATATTACTTGTTCACCATCAGTCACAAGTTCACGTATGCCGATGGTGTTACAGGGCCAGACGGGGTGTACGGTTTTGTCGGCGAACATTTGTTCGGTCCGTACCGGCCAATGAACGCTTCCGGCCTGGTGCTCGGCAATCCGCCCGAGCAGCCTTTCCAGACGTATTCGCACTGCGTCATGCCAAACGGTCTGGTAACTTCGTTCATCGACAGCGTGCCCACCACAGGTGAGGATTACCGTATCGGCGGGACCGAAGCGCCGACGGTGAGAATCCTCCTGAAAGGGGATCGCTCGTTCGTGCAGGAAGAATATGACTACGGTTATATCCCTGCGATGAAAGACGTGCAACTGAGCTGA,MYNSNSAVSQLQNSPLVDNIKYPPTVWSRADALKVNENDPTTTQPLVSADFPVMSDTVFIWDTMPLRELDGTVVSVNGWSVIITLTADRHPDDPQYLGPDGRYDIKRDWEDRHGRARMCYWYSRTGKDWIFGGRVMAEGVSPTTREWAGTPILLNDKGDIDLYYTCVTPGAAIAKVRGRIVTSDQGVELKDFTQVKKLFEADGTYYQTEAQNSSWNFRDPSPFIDPNDGKLYMVFEGNVAGERGSHTVGVAELGPVPPGHEDVGGARFQVGCIGLAVAKDLSGEEWEILPPLVTAVGVNDQTERPHYVFQDGKYYLFTISHKFTYADGVTGPDGVYGFVGEHLFGPYRPMNASGLVLGNPPEQPFQTYSHCVMPNGLVTSFIDSVPTTGEDYRIGGTEAPTVRILLKGDRSFVQEEYDYGYIPAMKDVQLS,"similar to GP:4903136,  and SP:O68609 ;",,,,,,,,Extracellular,Class 3,,,,,,,,,,PF02435,"Glyco_hydro_68, Levansucrase/Invertase. This Pfam family consists of the glycosyl hydrolase 68 family, including several bacterial levansucrase enzymes, and invertase from zymomonas..",,,
NC_004633,Plasmid_pDC3000A,PSPTOA0033,NP_808691,29171507,Protein,34296,34694,,,hypothetical protein,,,ATGATTCAATGTCCCGCAGCGGGGGCACTTGATCTGGAGTTCGGTGTAGTCACCCATGCGAAGCAGCAGCTTCTTGCACTGCCCGCATCTATAGTCTTTCAACACTTGCACTGGTCTCCTTTTGCTTCGCCCAAAGAAAAACCCCGCCTGGGCGGGGTTTGGGTAATCGCAATTTACCGGTCGGTGCTGTTGAAAAGCCCGTATCCGGCGGCTGCCCTGAGGCGCAAATCGCATATCGTGGTGCCTTTTTACCTCCCTCCGGAAAGGCTGGAAAGGGGCAGTTTCGGGGTGGGTCGAGTTTGGCCGGAGTTCAACACCAGTTCGACCACAGTTGCGCCATTGGCCCGGATAAACGGTACGTGTAGCGGCTTGCAATCGAAAACCGCTGGCTCACATTAA,MIQCPAAGALDLEFGVVTHAKQQLLALPASIVFQHLHWSPFASPKEKPRLGGVWVIAIYRSVLLKSPYPAAALRRKSHIVVPFYLPPERLERGSFGVGRVWPEFNTSSTTVAPLARINGTCSGLQSKTAGSH,identified by Glimmer2 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0034,NP_808692,29171508,Protein,36812,34863,,,GGDEF domain/EAL domain protein,,,ATGCTGAAAAAAATGATGGATGCCTTGCGCACCCTGATGTCCGTGCCCTCCGATAATCCTCGGCTGCTGCAAGCTCAATACATCGCATTGTCCCGACAACTGCCGCTGATGTACTTCGTGCTGTTGGTCAACACCTGGGCGCTTGCCTTTACCCATTGGGCAACTGCCCCGATGTGGCTGACGTTGCTGGTACCGACAGTCCTCACCATCGGGTGCTGCATTCGCGCGCGCAAGTGGCTGCTTACGGTAAACAAGCCGCCGCCAGCTTCAAGCACTATTCTCGAGACGCTGCGCGGCACCAATAGGCTGGTGGGTATCATCTCCACCGCATTTGCGGCATGGTCTTTGTCGATGTACCCCTATGGCGATGCCTATACCCAGGCGCAAGTGGCGTTTTTCATGGGCATCACCGTGATTGTGTGCATTTTCTGCATGATGCATTTGCAGTCTGCAGCCTTGATTACTGCAGTGATCGTCAATACAGCGTTCGTTATTTTCTTCGCCTCAACACACAACATCACGTTTATCGCCACGGCTGCAAATATCGTGCTGGTGTCGATCGGTATGCTGATCATTCTTCGCCATCAGTACCGCGACTTCACCAGCCTGGTGAACGCCCAGTTCAAGACTGAACAACTGAGCAACGCGAACCTGATGTTGGCCAATCGGGATAGCCTGACCGGCCTGCCTAACCGTCGGCATTTTTTCCAGACACTGGATACGGCGATGAACGAGGCACTGCTACAGCGCAGCGGGCTAGCGGTGGGTGTGCTGGATCTGGACGGGTTCAAGCCGGTCAACGATCTTTATGGCCATAGTGTTGGCGACAGGCTGTTGATGCTGGTCGCCGAACGGCTGACCACTGCTGCGAGCGATACCGTGCACGTGTCTAGGCTGGGCGGTGACGAATTCGCGCTGGTCATCAAGGGCGACACCAGTAACGAGGCGTTACTGATGTTCGGCAAGCACCTTTGCACGTTGATGCATGAAAGTTTCGAACTCTCGGAAATACCGATCCAGATCGGCGCGACTCTGGGTTTCGCAACGTATCCAGCTACCGCCGACAATGCTACCCAATTGTTTGAATATGCCGACTACGCCCTTTACCAAGGCAAGAATCACAACCCCGGGTCCACTTGCATATTTTCGGCCAGTCACCGTGAACAACTTAGTGCCGATGGCGTAACCGAGCAGGCATTGCGGCGGGCGAATCTGAAGACGGAGTTTCACGTTTTGTTTCAGCCGATCATTGAAAGCTGTACACGCGAAACAGTGGCTTTCGAGGCGCTGGCACGCTGGGACAGTCCAGTACTCGGCGCGGTATCGCCTGCGCATTTCATTCCGATTGCCGAGCGGATCGGCATGATCAACGAGCTGACCGCCCCTTTGTTAACGCAGGCGCTACAGCGAGCATTGTCCTGGCCGTCGCCGATCAGGCTGTCGTTCAATTTGTCGGCCCATGACTGCGCGACCTGGGAAAGCGTCAAGAGAATTGTCGATATAATCGAAAACAGTGGTTTTGACGCCTCACGACTTGATCTGGAAATCACCGAAACGGCTGTCATGCAGGACATTGACCAGGTTCAACAGGCTATCCTCCGGTTCCGTCAGTTGGGTTGCGGGATTTCCCTTGACGACTTTGGCACCGGTTACACTAGTCTCAGCCAGTTGCACGCCTTGCCGCTGACCAAACTGAAGATTGATCGCAGTTTTGTGAGGTGCGTGCATGACAATCCGGCCAGCTACAAGATCGTCAAGTCGCTGGTGGCCCTAAGCCTGGACATGTCATTAGGATGCGTGATCGAGGGTGTCGAGACGCAGGACGAGCTGAACGCGCTGACGAGTCTGGGCTGCACGATGGTCCAAGGCTACTTCTACAGCCCGCCGATAACGTTCGCCGAAACACTCGTGTGGATTGAGGCGCCGGATGACGAGCGCACGTTTGGTTAG,MLKKMMDALRTLMSVPSDNPRLLQAQYIALSRQLPLMYFVLLVNTWALAFTHWATAPMWLTLLVPTVLTIGCCIRARKWLLTVNKPPPASSTILETLRGTNRLVGIISTAFAAWSLSMYPYGDAYTQAQVAFFMGITVIVCIFCMMHLQSAALITAVIVNTAFVIFFASTHNITFIATAANIVLVSIGMLIILRHQYRDFTSLVNAQFKTEQLSNANLMLANRDSLTGLPNRRHFFQTLDTAMNEALLQRSGLAVGVLDLDGFKPVNDLYGHSVGDRLLMLVAERLTTAASDTVHVSRLGGDEFALVIKGDTSNEALLMFGKHLCTLMHESFELSEIPIQIGATLGFATYPATADNATQLFEYADYALYQGKNHNPGSTCIFSASHREQLSADGVTEQALRRANLKTEFHVLFQPIIESCTRETVAFEALARWDSPVLGAVSPAHFIPIAERIGMINELTAPLLTQALQRALSWPSPIRLSFNLSAHDCATWESVKRIVDIIENSGFDASRLDLEITETAVMQDIDQVQQAILRFRQLGCGISLDDFGTGYTSLSQLHALPLTKLKIDRSFVRCVHDNPASYKIVKSLVALSLDMSLGCVIEGVETQDELNALTSLGCTMVQGYFYSPPITFAETLVWIEAPDDERTFG,similar to GP:17865161 ;,,,,,,,,Cytoplasmic Membrane,Class 3,,TIGR00254,GGDEF,diguanylate cyclase (GGDEF) domain,No data,8.90E-30,,No data,No data,PF00563PF00990,"EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues. The EAL domain is a good candidate for a diguanylate phosphodiesterase function. The domain contains many conserved acidic residues that could participate in metal binding and might form the phosphodiesterase active site..GGDEF, GGDEF domain. This domain is found linked to a wide range of non-homologous domains in a variety of bacteria. It has been shown to be homologous to the adenylyl cyclase catalytic domain and has diguanylate cyclase activity. This observation correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate..",COG5001,"COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain [Signal transduction mechanisms].",Signal transduction mechanisms
NC_004633,Plasmid_pDC3000A,PSPTOA0035,NP_808693,29171509,Protein,37434,38135,,,"transcriptional regulator, GntR family",,,ATGCTTAGCTTTCCACGTCCTCACTCCCTCGTCGAAGGTGTCGTCTCTGCGATCCGCAGAGAGATTGTGAGTGGACGGCTCCCTGCAGAGTCGAAGATGCCGACAGAGCATGAGTTAGCTGATCAATTCAGTGTGAGCCGGTCCGTGGTACGTGAGGCCATTTCGCAGCTGAAAGCTGACGGCGTTCTAGTTATTCGTCGTGGCAGCGGTTCATTTGTTTCTCAGACTCCTGGTGGAACGGTCTTCCGGCTGCCAGGCAACGAGGACCATTCGGCTGGCTTAGCTAAACTATTTGAATTGCGCTCATGGATTGAAATACAAGTTGCGTCTGTTGCTGCGCAGCGGCATACAGATGCAGATTTGAAGCGGCTGTCTGACGCCATGTTGTTGATGGAGAGTAACGCGGGAAATTTCGAGATATCCTCCAAGGCAGATTGTGAATTTCACTGCGCCATCGTAGCTGCGTGCAAAAACGAATATCTGACTGCCTTCCATGACTTCTTAGGCAGCCAGTTAATCCAGGCTCGTTTCATGGCTTGGGAAAACTCCTCAAAACTTGAAATAGGTCCAAGTGGTGCCATCCGTGAACACCGTGAAATCTTCGACGCAATAGCAAAACGAAATCCCTCTGAAGCCGCTCATTGTGCCCGCATGCATCTCAAGGCTGCCGCGCTACGGCTCAATATCGATCTGGCGGATTAG,MLSFPRPHSLVEGVVSAIRREIVSGRLPAESKMPTEHELADQFSVSRSVVREAISQLKADGVLVIRRGSGSFVSQTPGGTVFRLPGNEDHSAGLAKLFELRSWIEIQVASVAAQRHTDADLKRLSDAMLLMESNAGNFEISSKADCEFHCAIVAACKNEYLTAFHDFLGSQLIQARFMAWENSSKLEIGPSGAIREHREIFDAIAKRNPSEAAHCARMHLKAAALRLNIDLAD,identified by match to PFAM protein family HMM PF00392 ;,,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,PF07729PF00392,"FCD, FCD domain. This domain is the C-terminal ligand binding domain of many members of the GntR family. This domain probably binds to a range of effector molecules that regulate the transcription of genes through the action of the N-terminal DNA-binding domain pfam00392. This domain is found in proteins that are regulators of sugar biosynthesis operons. It is also in the known structure of FadR where it binds to acyl-coA, the domain is alpha helical. This family has been named as FCD for (FadR C-terminal Domain)..GntR, Bacterial regulatory proteins, gntR family. This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerisation domain. The GntR-like proteins can be divided into six sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships..",COG2186,"FadR, Transcriptional regulators [Transcription].",Transcription
NC_004633,Plasmid_pDC3000A,PSPTOA0036,NP_808694,29171510,Protein,38204,39397,,,hypothetical protein,,,ATGATCTACGATTTCTGTGTGATTGGAGGGGGAATCGTTGGGCTTGCCACGGCGATGCGGCTGCTTGAGGTCTACCCTGGCTGTTCGCTTGTGTTGATGGAGAAAGAGCTTTCACTCGCACAGCATCAGACAGGCCATAACAGCGGAGTGATACATGCTGGGGTTTATTACGCCCCAGGCAGCTTTAAAGCTAAGCTCTGCGCGCGCGGTGCAGAGCTCACGAAATCGTTTTGCACCGAACACAGTATTCCTTACGAAGTGTGCGGAAAATTGGTGGTTGCATCAAACAAGGATAGCCTCGCCAGATTGGGATCGCTTGAAGAGCGGGCAAAGCAAAATGGCCTTGCCACAGAACGCCTTGATGCCCTAGAGCTACGGCGGCGCGAACCCAATGTCGCCGGGGAGGGCGCGTTGTTTGTAAAAAGCTCAGGGATCGTTGATTACGGTGTTGTGTCTAATTCCATGGCCAATGTGATCATCCAGTCTGGAGGGCAAATACTTCTGGGCCAAACAGTCGTCTCTATAGAAGAACATGGAAACCATGTAAACATTGCGTCTGAGGGTTCGTCGTTGTCTGCAAAAAAACTGGTGGTCTGCGCGGGTTTACAATCTGATCGCCTGGCAACGCTTGCGGGCTTGAAATTGGACTGCCAGATTGTTCCATTCAGAGGTGAGTATTATCGGCTGTCTTCACATCTTGATTACAGTGTAAAGCACCTAATATATCCGGTTCCTGAGGTCGGGCTACCGTTTCTGGGCATACATATAACTCGAATGATCAATGGAGGCGTTACGGTTGGGCCCAATGCCGTATTGGGGCTATCAAGAGAAGGGTATAGCAAGTTCTCATTCAATGCGCGTGATTTTTTAGAATATAGTTCGTACCCTGGATTTTGGAAGCTCATTGGGAAAAACATTAGCTCTGGCATTGCTGAAATGAGAAATGCACTTTTCAAAAAGAGTTATTTAGAGCAGTGCCAAAAATACTATCCATCGCTTAAGTTGGAGGACCTTGAACCGTATGAGGCAGGCATTCGTGCTCAGGCGGTAACACGTTCAGGCGAGTTTGTAGACGACTTTCTGTTCGTACAGACAGAAAGAATGTTGCATGTGTGCAACGCGCCATCCCCAGCAGCTACGTCAGCCATTCCGATAGGTCAAATTATTGTAGATAAGCTTACGAAGAATTGCTGA,MIYDFCVIGGGIVGLATAMRLLEVYPGCSLVLMEKELSLAQHQTGHNSGVIHAGVYYAPGSFKAKLCARGAELTKSFCTEHSIPYEVCGKLVVASNKDSLARLGSLEERAKQNGLATERLDALELRRREPNVAGEGALFVKSSGIVDYGVVSNSMANVIIQSGGQILLGQTVVSIEEHGNHVNIASEGSSLSAKKLVVCAGLQSDRLATLAGLKLDCQIVPFRGEYYRLSSHLDYSVKHLIYPVPEVGLPFLGIHITRMINGGVTVGPNAVLGLSREGYSKFSFNARDFLEYSSYPGFWKLIGKNISSGIAEMRNALFKKSYLEQCQKYYPSLKLEDLEPYEAGIRAQAVTRSGEFVDDFLFVQTERMLHVCNAPSPAATSAIPIGQIIVDKLTKNC,"similar to GP:13926144,  and GP:13926145 ;",,,,,,,,Unknown,Class 3,,,,,,,,,,PF01266PF06039,"DAO, FAD dependent oxidoreductase. This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1..Mqo, Malate:quinone oxidoreductase (Mqo). This family consists of several bacterial Malate:quinone oxidoreductase (Mqo) proteins (EC:1.1.99.16). Mqo takes part in the citric acid cycle. It oxidises L-malate to oxaloacetate and donates electrons to ubiquinone-1 and other artificial acceptors or, via the electron transfer chain, to oxygen. NAD is not an acceptor and the natural direct acceptor for the enzyme is most likely a quinone. The enzyme is therefore called malate:quinone oxidoreductase, abbreviated to Mqo. Mqo is a peripheral membrane protein and can be released from the membrane by addition of chelators..",COG0579,"COG0579, Predicted dehydrogenase [General function prediction only].",General function prediction only
NC_004633,Plasmid_pDC3000A,PSPTOA0037,NP_808695,29171511,Protein,39438,40784,,,major facilitator family transporter,,,ATGAGCGATGTAACGGATTTGCCTTGTAGTGAAAGTTCAGGTCAGCGAAAAGCTCGGCTGCGCAGGGTTGCTGGAGCAACAATAATTGGCTCAATGTTGGAATGGTACGATTTTTATCTGTATGCAATGATGGCTGCAACGGTTTTTGCGAAAGTTTTTTTTGACCCTAGCGATCCCCAAACGGCAACGCTTATGGCATTTTCAACGTTCGCAATTGGATTCATAGCGCGGCCATTTGGTGGCGTAATATTCGGGCATTTGGGCGATAAGTTCGGTCGCAAGCGAATGCTGATGGTGACGTTTTGCCTGATGGGCATTTGTACGACTGCAATCGGCCTGGTTCCTGGGTATGCCACGATGGGCATCTGGGCTCCAATTCTGCTGGTGCTGATTCGAATTCTCCAAGGCCTTGGTGCCGGTGCTGAACTTGCTGCTGCAGCGGTGACTGCATATGAACATGCTGAAGAAAATAAGCGTGGAAGCCAAGGAGCGTGGCCCGCGCTAGGATTGAACCTGGGTCTGCTTCTCTCATCCCTGACGGTCTATCTCCTTACGATGCCAGGAGAAGAGTTTCTCATTGAGGGAGGTTGGAGAGTACCGTTTATTGGCAGCATCGTTTTAGTTTTGGTTGGTATGTGGGTACGAAACAGCATCCCTGAAACGATTGCATTCCAAGAGATAAGTAATGCGAAGCAAGCTCAAGGTTCATCGGAGATAGGAATAGCAAAAACACCTCTGTTGGCCTTGCTGAAGAAAGATTTTAAAGGTCTAGTAGTCGTGCTTCTTGTTGCAATTGGGTACAACGCACTCAGCTATATATTCAAAACATTTTCACTTGCTTATCTCACTTTGTACAAAGGTGTGTCTGCAAACACTACATCACTTTCGGTAACTATTGCCAGTCTAATAGCAATCTTCACTGTCCCCTGCTTTGGAGCTTTGTGTGACCGTTGGAGCAGCAAAAAGGTGTTGATGGCCGGGGGAGTTCTGTCAGCCATATTTGCATACATCTTCATGCAGCTTCTTGAGACGGGCCAGAACCTATGGATATTCATTGCAATTGGCCTTGCGACTGGTGTGCTGGCTCCGATGATGTTTGCCCCGCAAGGCTCTTTCTTGAGTCGTCAATTCCCTACGCATACAAGGTCTTCAGGCGTAGGCACAGGCCGTGAGATCGGAACTGCAATTGCTGGTGGTTTAGCACCGCTTGGAGCGTTGTCGCTGGTTTCAAACTCACCCAAGCACTCTACAATTGGCGTCGTATGGATTTTAATATTGTCGGCAGTCTTGCTTGTTGTGGCTAGTGCTTTTGATCAGGGTGGAAAGAACTCCAGCTTCAAAAATTGA,MSDVTDLPCSESSGQRKARLRRVAGATIIGSMLEWYDFYLYAMMAATVFAKVFFDPSDPQTATLMAFSTFAIGFIARPFGGVIFGHLGDKFGRKRMLMVTFCLMGICTTAIGLVPGYATMGIWAPILLVLIRILQGLGAGAELAAAAVTAYEHAEENKRGSQGAWPALGLNLGLLLSSLTVYLLTMPGEEFLIEGGWRVPFIGSIVLVLVGMWVRNSIPETIAFQEISNAKQAQGSSEIGIAKTPLLALLKKDFKGLVVVLLVAIGYNALSYIFKTFSLAYLTLYKGVSANTTSLSVTIASLIAIFTVPCFGALCDRWSSKKVLMAGGVLSAIFAYIFMQLLETGQNLWIFIAIGLATGVLAPMMFAPQGSFLSRQFPTHTRSSGVGTGREIGTAIAGGLAPLGALSLVSNSPKHSTIGVVWILILSAVLLVVASAFDQGGKNSSFKN,similar to GP:13926146 ;,,,,,,,,Cytoplasmic Membrane,Class 3,,TIGR00883,2A0106,metabolite:proton symporter family protein,subfamily,3.80E-130,,Transport and binding proteins,Unknown substrate,PF00083PF07690,"Sugar_tr, Sugar (and other) transporter..MFS_1, Major Facilitator Superfamily..",COG2814,"AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].",Carbohydrate transport and metabolism
NC_004633,Plasmid_pDC3000A,PSPTOA0038,NP_808696,29171512,Protein,40825,41010,,,hypothetical protein,,,ATGCTAATCCAAAAAGATAAAGTTCGAGTCGAAATCAAAGAATTGATTGACCTGATTCGGCTGGACGAAAAATATGCGTCCTTAGCTGCTGATCGTGTGCTTCCAGTCGATCAACAGGCTTTACAGTTCCATTGTAAGCGTAGAAGTCGTATTGAGGAAATAACCCGTAAGTATGGATTAGATTGA,MLIQKDKVRVEIKELIDLIRLDEKYASLAADRVLPVDQQALQFHCKRRSRIEEITRKYGLD,similar to GP:13926145 ;,,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0039,NP_808697,29171513,Protein,41367,41032,,,"transcriptional regulator, PbsX family",,,GTGGTCGGGGCAAAAATAAAGGCCCTCCGCAAGTCGACAACCCTGAGCCAAGCTGATTTGGCAGAAATGATAGGGTGCGATGCGCCGTTGGTAAGTCGATACGAAAGAGGTTCTACGCTTCCAGGTATTGAGCAATTGATAAGAATCGCTACAGTTTTCAACGTCGCACCAGGAGAGCTTCTACCTGGTGGCCAAGATGTATTACGAACACGGCTGCTTTCGCTTCGACAAGAAATCACAGAACGCATCGCTGAAGTCGATTCGCCAGAATATTTGGAAGAAATGCTTAACTTCATTAACAGATACCCGCAGTACGATAATAAAAATAAGAAATGA,MVGAKIKALRKSTTLSQADLAEMIGCDAPLVSRYERGSTLPGIEQLIRIATVFNVAPGELLPGGQDVLRTRLLSLRQEITERIAEVDSPEYLEEMLNFINRYPQYDNKNKK,"similar to GP:13926146,  and SP:P23789 ;",,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,PF01381,"HTH_3, Helix-turn-helix. This large family of DNA binding helix-turn helix proteins includes Cro and CI..",COG1396,"HipB, Predicted transcriptional regulators [Transcription].",Transcription
NC_004633,Plasmid_pDC3000A,PSPTOA0040,NP_808698,29171514,Protein,41631,42164,,,hypothetical protein,,,ATGAAAAATTGGCGTGTTTTGATGCACAATTCTTCCGTTTATCAGTCGCTTATCACGTCGATCGAACGATTGGATGTGGAGGTGTATTCCCCCGAAAGCATTACCTACCGCAAACGTCCTGATCGCCCTTCATCGACAGAGAAGGTGGTGCGTTTGTTTCCTGGCTATCTGCTGCTGCGCTTCGATCCCCAAGTGACGCACACCACCACCATCACAGCGTTGAACGGCGCCCGTGGGTTTGTTCAGTTTGGCGGTCAAACGTGTGAGTTCGGCGGTCAAGCGTGTGTCATGCAGGACAGCACAGTAGAGGGCTTGAAGGCAGCGGCTTTGGTTCGTTCCAACCGTGCGCTTGATTGCGTCGAGTTTCGTAATTTGCCGACAGAGCTGGAAAAAACGCTGCGTCTGATCATCGACATGAAATCTGAAGCTGCGCGTAGAGCGGCTTTCCTTGCGCTCCTGGCCCAGGACGCAGCGCTGGAGCGCCTTGTCAGGCGCCACGGAACCCTTTGCTATTCGAGGGTACGTGCCGCCTAG,MKNWRVLMHNSSVYQSLITSIERLDVEVYSPESITYRKRPDRPSSTEKVVRLFPGYLLLRFDPQVTHTTTITALNGARGFVQFGGQTCEFGGQACVMQDSTVEGLKAAALVRSNRALDCVEFRNLPTELEKTLRLIIDMKSEAARRAAFLALLAQDAALERLVRRHGTLCYSRVRAA,"similar to GP:13926148,  and GP:12053565 ;",,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,PF02357,"NusG, Transcription termination factor nusG..",,,
NC_004633,Plasmid_pDC3000A,PSPTOA0041,NP_808699,29171515,Protein,42480,42752,,,"lipoprotein, putative",,,ATGCAAAAGAGACTCCTTTTTTCCGTGCTGCTCATCTCTCTGTCAGGGTGCAGCCAGCCGACGGCCCAGTTCGCACAGGAACCGGCGGGGGAACGGGTGGATGAGCTGATCCGACAGAGCGCTTCTTCGGTGAGCCAGGCGCAGAGCCGGTTGCACCAGACCAGCGCTGTTCCTTCCTTTGCTCCCGTGTCAGCACAGGTCAAACCGACCGCTAAAGCACAGGCTCCCGCAGTCAAAGCTCCCGTCAGGCCTGTGCCTGTTGCTGGGGGTTAG,MQKRLLFSVLLISLSGCSQPTAQFAQEPAGERVDELIRQSASSVSQAQSRLHQTSAVPSFAPVSAQVKPTAKAQAPAVKAPVRPVPVAGG,similar to GP:12750993 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0042,NP_808700,29171516,Protein,42755,43246,pilT,,pilT protein,,,ATGCGCTGCCTATGGCTGGTTTTGGCATTGTCGGCGCCGATGCAGGCCTCTGCTTTCTGCTTCCAGGAGGCTGGCCAGCGCTATGGAGTTGATCCGGTGCTACTGCAAGCGATCGGCATACAGGAAAGTAAACTGCAGCCTGGTGCAGTGAACCTTAACCGCGATTCGTCTGGAAAAGTGCTCAGCACCGACTACGGCGTCATGCAGATCAGCACGCGCAACGCTAACCGGCTGGTCAGGATGGGACTGATCACGCGAGCGGAGGACCTGCTCACCAACGCCTGCTTTAACGTTCAGGCGGGGGCTTGGGTACTGGCTCAACATCTTCGTGTGTGCGGCAATACCTGGCGTTGCCTAGGTTCGTATAACGCAGGCTTTGACCCTTCGCAACGCCAGGAGCAACGGCGCCTGCATTACGCGCAGCAAGTGCGCAACGTCTACGACCGCCTCAAAGCATTGGGCGCTGCACCGGCCCACCTCGCTATCCGTTAA,MRCLWLVLALSAPMQASAFCFQEAGQRYGVDPVLLQAIGIQESKLQPGAVNLNRDSSGKVLSTDYGVMQISTRNANRLVRMGLITRAEDLLTNACFNVQAGAWVLAQHLRVCGNTWRCLGSYNAGFDPSQRQEQRRLHYAQQVRNVYDRLKALGAAPAHLAIR,similar to GP:4512530 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,PF01464,"SLT, Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems (reviewed in )..",COG0741,"MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) [Cell envelope biogenesis, outer membrane].","Cell envelope biogenesis, outer membrane"
NC_004633,Plasmid_pDC3000A,PSPTOA0043,NP_808701,29171517,Protein,43283,43756,,,"traH protein, putative",,,ATGAAATACTCCCTTTGGGCTGCGCCGGCGGCGGCATTGCTGCTGTCTGGCTGCCAGAGTTTTTGTGAGAAGCCGCCGGCGGCTCCTACGCCTTCTGCGACAGCTGCGCCGGTACTTGATCGGGTTGCGTTACAGCAAGAAACGCTGTGGATGGAAGGTGCGATAAATACCCGGTCAACCCTGCCGACCGATGCTATCCGTGCTCGGAGCGACCTGGTCGCGGTTGACTGGAGCGGTGACGCGATTGAGCTGCTGTCCCATCTGGCCCGCCAGCGCGGTCAGACGTTTGCCTGGACCGGCGTGCGCCTGCCCTTGCCGGTGAACCTCAAGGTCAATGGAATCTCCTATGCGAATCTGTTGCGTCTGATCGAGATGCAAACAGCCTGGCGTGCGACCCTGACCCAGCTTCCAGGGCAACTGACCCTGGCCTTTGCGCAGGCGGAGCCTACCAAGAAGGCGGGAGGGCGTCAGTGA,MKYSLWAAPAAALLLSGCQSFCEKPPAAPTPSATAAPVLDRVALQQETLWMEGAINTRSTLPTDAIRARSDLVAVDWSGDAIELLSHLARQRGQTFAWTGVRLPLPVNLKVNGISYANLLRLIEMQTAWRATLTQLPGQLTLAFAQAEPTKKAGGRQ,similar to GP:20521608 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0044,NP_808702,29171518,Protein,43753,44553,traI,,relaxase,,,GTGAAAAAATCAATTCTGACGCTTGTCCTGTTGCAGGGCCTGCAAGGGTGTGGACATACGCCACCTTCCACACCCGCCGACACGCCGGCGCCACTGGAAAGCTATCTTGTCCCCGCTGACCCGCCGTCAGCAGACGTGACCGAATCGCGGCGACAACTGCTGGAGGAATCGGGACGCAATACAGGGTTTCGTGGCGGTAAGGCTGAGCGCGTGTGGGAATTACGCCAGGCATTGGAGGGGCAGATCGGACGGCTCAACACCTTGTATGACTTTCGGACCCTGATCAGCCGTGAGGGCTGGCTACCGCCAGTCATCGACGAGGCGGTGGACGTGGCCCATATCACGCCACGGCAGATACGCACTGCAAGCCATGTTTACGAAATCATTGTGCCCGAACGGTTCGTCAGTAACCCACCGTCGTGGCGTACCTGGTTGATGGCGGGCCTGTCATCGTCGGGCCCTGATGAAACCGTGGCAGTCACACCTGAAAACCGTTTGCAGAAGGCGCTTTGGCAAGCGGCGGTCCGCCAGGGCTGGGGTGAAGGGCGGCAAAGTGCCGATCAGACCCTTGAAGCCAATTTCAACCGCCTGACCCGAGATTACCGGGGCATGCTGATGTACTCGCAGTTACTGCGCCAGGGGTTCATCACGGCGCCGGTAGTCACGGATCAACAGCAGACCGTGACGGGGGATCGGCAGAAGCTGACCACCGGCGATCGCGTACGAAGCCTCAAGGAGAACGCCGGCTTTGTTCCCGACAAAACTCAGTGGCATCCGGTGATACGCAAGGTGCAGCCATGA,MKKSILTLVLLQGLQGCGHTPPSTPADTPAPLESYLVPADPPSADVTESRRQLLEESGRNTGFRGGKAERVWELRQALEGQIGRLNTLYDFRTLISREGWLPPVIDEAVDVAHITPRQIRTASHVYEIIVPERFVSNPPSWRTWLMAGLSSSGPDETVAVTPENRLQKALWQAAVRQGWGEGRQSADQTLEANFNRLTRDYRGMLMYSQLLRQGFITAPVVTDQQQTVTGDRQKLTTGDRVRSLKENAGFVPDKTQWHPVIRKVQP,similar to GP:4903109 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0045,NP_808703,29171519,Protein,44550,45731,,,type IV pilus biogenesis protein,,,ATGACCCAGACGGCCCAGACAATGGAGTTTGCCCCCTACGCTTTTGAAGACGGGCTGAATGCAGACACCTTGCGCGATTTTTTCGTCTGGTGTGAACGGCAGTCAGCCAGCGACATTCACATCCAGGGCGGTAACCACCTGGTGGTAGGGCATCAAGGTCGCTTGCGCCAGGCCAGCCGGTTTGTGCTGGCTGACGATACGTGGTCCAAGCTCCTCGATGATCTGTTCAGCCCTGAAATCCGGCCGACGGTACGCGGTGGTCGGCCTGTAGACCGGGCCATACAGCTGGATGGCGACATCAACCAGCGCTACGGCCTGGAGCGTGGCGAGCGATTACGCTTTCGCTGCAACTTTGTGCAGGCCACTGCTGGGCGACTGGACACCACCATCGCACTGACGATGCGGATCATTCCATCTGATATCCCGGATCTAACAAAGATGGGGCTGGAAGAGGATCTGTTCGAAGCGTTGTTGCCGTCCAATGGTCTAGGACTCATTGGTGGAATCACGGGGTCGGGTAAAAGTACCCAGGCGGCCGCTATCTACCGCTTTTGCCTGGACACCGATCCTGACCGCAAGGTGACCACGATCGAAGACCCGATCGAATTCATTCTCGCGCGTCCAGGGGATGTATTGGCCTCGACGCAACTGCAGATAGGTCGAGACGTTGCCAACTATGCCGAAGGCATTCGGGCAGATCTTCGCCGGGCACCGTCGATCATCGGGGTGGGTGAAATGCGGGATTTGGAAACCTTCCAGGCGGCCGTTTTGGCCGGACAGGTGGGCCATTTCAATCTCAGCACCTTGCACATCCATTCGCCTGGAGAGGCCATTCCACGGTGCCTGACCATGGTGCCCTCGGAAATGCGCGAGGCTACGGCCCACGATCTACTGAGCGTTCTGCAATACATCATCGTGCAAAAGCTGCTGCGCACCACCGATGGCAAGCGCCAGGCCGTGCGCGAATACATCATCTTCGATGATGGGCTGCGCGCCAAGCTGGCCAGCATGCCTTATCCCGAATGGGGTCGGCATATCGACTCCATTATTCGCCTGGAGCAACGACGCTTCGCTGATCAGGCCTGGCGTCTTCATCTGGAAGGGCGCATTGACCGGCGTGAACTGGCGGTGGCCATGACCGCCTCTCAATTGCGGGAACTCGAACAGCGGGCAAAGCCATGA,MTQTAQTMEFAPYAFEDGLNADTLRDFFVWCERQSASDIHIQGGNHLVVGHQGRLRQASRFVLADDTWSKLLDDLFSPEIRPTVRGGRPVDRAIQLDGDINQRYGLERGERLRFRCNFVQATAGRLDTTIALTMRIIPSDIPDLTKMGLEEDLFEALLPSNGLGLIGGITGSGKSTQAAAIYRFCLDTDPDRKVTTIEDPIEFILARPGDVLASTQLQIGRDVANYAEGIRADLRRAPSIIGVGEMRDLETFQAAVLAGQVGHFNLSTLHIHSPGEAIPRCLTMVPSEMREATAHDLLSVLQYIIVQKLLRTTDGKRQAVREYIIFDDGLRAKLASMPYPEWGRHIDSIIRLEQRRFADQAWRLHLEGRIDRRELAVAMTASQLRELEQRAKP,similar to GP:4512517 ;,,,,,,,,Cytoplasmic,Class 3,GO:0043107 ;,TIGR01420,pilT_fam,twitching motility protein,subfamily,9.10E-20,,Cellular processes,Chemotaxis and motility,PF00437,"GSPII_E, Type II/IV secretion system protein. This family contains both type II and type IV pathway secretion proteins from bacteria. VirB11 ATPase is a subunit of the Agrobacterium tumefaciens transfer DNA (T-DNA) transfer system, a type IV secretion pathway required for delivery of T-DNA and effector proteins to plant cells during infection..",COG2805,"PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion].",Cell motility and secretion / Intracellular trafficking and secretion
NC_004633,Plasmid_pDC3000A,PSPTOA0046,NP_808704,29171520,Protein,46304,46513,,,hypothetical protein,,,ATGTTGTGCCGCCAGGACAAGACCGACACAGCAATAGACGCCGGTGCCATGCGTGATGCAAACGAATGGCTCAAGGTTGCCGCTGAAAATCTCGGTGCAGCCCTGTGCAAGCCTGCCAAGAGGGGCCACGCCATGACTGAGCCTTTGGTGCAACAAGCACAAGCGCATCGAGAAGTACCCAGCGCTCTTGAACAGAGTGCCGAGTCATGA,MLCRQDKTDTAIDAGAMRDANEWLKVAAENLGAALCKPAKRGHAMTEPLVQQAQAHREVPSALEQSAES,identified by Glimmer2 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0047,NP_808705,29171521,Protein,46510,47061,,,endonuclease,,,ATGACTGCCCTATCGGCGTTAACCAGACCGCTCAGTCGTGGGCTGCTGGCCTCGGTGCTGCTGTGCAATCTGTCCTTTACCGTTCAGGCGGCGGAAATACAGGTGGGTTTTTCACCCGAGGGCAGCGCGGAGCAGTTGGTACTCAATGTGATCCAGCGAGCCCGGCAGCAGATACGGCTGATGGCCTACAGCTTCACCTCTCCGAGCGTAGTCAAGGCGTTGGTGCAAGCCAAACGGCGCGGCGTCGATGTACAGGTGGTGGTCGATGCCCATGGCAACGACAACAGGGCCAGTCGCGCTGCGATGAACCTGCTGGCCAACGCGCAAATCCCTGTGCGCACCAACGGGGTGTACAAGATTCAGCACGACAAGGTGATCATCACCGATGGCCAGAACGTCGAGACCGGCTCGTTCAACTACTCGGCCTCCGCTGCCAAGGCCAACAGCGAAAATGCGGTGGTGATGTGGGACGTTCCTGCGGTGGCCAGCGTGTACCTGGAGCATTGGCAATCACGCTGGGTACAGGGCCAGCCTTATCAGCCGACTTACTGA,MTALSALTRPLSRGLLASVLLCNLSFTVQAAEIQVGFSPEGSAEQLVLNVIQRARQQIRLMAYSFTSPSVVKALVQAKRRGVDVQVVVDAHGNDNRASRAAMNLLANAQIPVRTNGVYKIQHDKVIITDGQNVETGSFNYSASAAKANSENAVVMWDVPAVASVYLEHWQSRWVQGQPYQPTY,similar to GP:498885 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,PF07894,"DUF1669, Protein of unknown function (DUF1669). This family is composed of sequences derived from hypothetical eukaryotic proteins of unknown function. Some members of this family are annotated as being potential phospholipases but no literature was found to support this..",COG1502,"Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes [Lipid metabolism].",Lipid metabolism
NC_004633,Plasmid_pDC3000A,PSPTOA0048,NP_808706,29171522,Protein,47372,47659,traK-2,,traK protein,,,ATGTCTGACCAGCAACTGCAACCGGGATATTGGCGCGACGCCTCACGCCTTCTCAATCTCTACGGCATACCAGCCCCCTTGTTCTTGTTGTACCTGGCGTGGTTTCGCTTCCCCAGCATGATCACGCTCTGCGTCATCACCGCCATTATTTGCGGCTTTCGGCTGCTCTCGTCCTTTGGATGGACGTTCCAGGTCCTGGTGATGCGACTGGCTTACCTGATGCGCGGCAAGCGCATGTCCGGTCGGCCCTGGTGGTATCGACGCTTTACCGAAAGGGGGGAGCGATGA,MSDQQLQPGYWRDASRLLNLYGIPAPLFLLYLAWFRFPSMITLCVITAIICGFRLLSSFGWTFQVLVMRLAYLMRGKRMSGRPWWYRRFTERGER,"similar to GP:4512515,  and GP:4903111 ;",,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0049,NP_808707,29171523,Protein,47811,51980,,,"DNA primase, putative",,,ATGAAGATTGAAACAGCCCCTCGCACATCCGAATACCCGGTCTGGTTGGCAGTGCCGCCTGACGATCGTGAAAAAGCACGTCTGTCTGCTGGACGACTCAGTGACGGTCGTGCGGCTATTGCCTGGAACAAAGAAGAAAAGCTTTGGTTTGCCAGACCTGGATGTGACCTTGATCGCATCACCGCCTGGTTGCCTGATCCAAGCCGCCGTGCCGGTGGTGGTGACGCCGAATCAGAGTTTCTAGATGTACTGACTCAAGCCGGCCTGGTGGTCAAAGGCATGCCGGTGATGGACGGTAGTCGGCAGCGTGTCGCGACGGTCGATGACAAGCACGGCAAGAAAAGCGGCGTCTATTGTGGCTTTCTGGATCGTCGCCCTGCAGGCTGGTTCATCAACTACCACCGTGCCGATTCGCCCAAGGATGTAACCAACTGGGCGGCGACTGGCGGTGAATCTGATCCGATCACCCGCCTGCACATTCGGGCCGGGGCCAAGCAAGCCCAGGAAGACGCCGCTCGTGATCGCGCTGTTACCTACGCCAAGCAGACGTTGGCTGCCAAGAGACTTTACGACCGGCTGCCCGCCGCAGACCCTGCGCACCCCTACCTGGTGCGGAAGGGAATACCCCCGACGCCCGACATTCGTCAAACACGAAACGGTGCCCTGGTGGTGCCGTTTTTTAATGCCTCGGGAACGTTCAAGACGCTGCAGTACATCCCACCCGAGGGTGAGAAGTTCCTCTTCAAGGATGCCCCCAAACAAGAGCATTTCCTGGTGGTGGGCGGCTCGCTCGATCCGGTCAACCCCATCCTGTATGCCGAGGGCTATGCCACTGCGCGCAGCCTGAACCTGGCCACCGGCCTGCCGGTGGTGATGACCATTGACGCCGGCAACATGGTGGCGGTGGCCAAGGTGCTGCATCAGCAGTATCCCGACAGTCGGCACCTGTTCATGGCGGATTTCGATCATGCCAAGGACGTGAACAAGGGGTTGATCATGGCCAATGAGGCGGCCATAGCGGTGGGGGGCCAGGTTCTGTATCCAACGTTCAACGACGCCGAAATTGCCCGTGGGTTCACGGACTTCAACGACCTTCACCAATCACGAGGACTGGACGCGGTGCGCGAACAGACCGCTCCCCTGATTCGACCGTATGAAGAGGTAACTACCATGCCGACAGATTCGAACACTCAGTCTCCGGACAATACTGCGCAAAAGGTAGCAACTCCCGCGCAAGAAACGCTGGAACTGGATGCAGCGCCTGCAGCTTCAATACAGGTCCCGGATCAATCCGCACCGCCGCAGACCCGTAGTGCTCAACCGGTTGCATCTGAAGCGTCATCTGTTGAAAGCCAGTCGCCCGAAACTGCCCAGGTCACTGAAGCACCTGTTGGCATTGATGATGCGCAGGTATCCACCCAGCCACCTTTGGCGTTGTCACCTGCTGAGCAACTGGCGTCGGTAGAGGCCGATCCTGACGCTTCCGCGATCGTTGACGAACAGCCCAAAGCGACAATGTCTGTGGCGACAGACCGCAACACGCCGTCTGACGCGCCTGAACTCACCCAGCCTACCTCGGCGGAGGTCGTGCCAGAGCAGTCTAACGAAACCGCTCAACCAGATGCGCGCTCTGCTCAACAACAGGCACCGGGAGAGGCCGACCCAGGCTCTTCTGCCAACGTGGATGATCAGAAGAGGGCGGCACCACCTGCGGCGACAGACCAAGAAATGTCCTCTGACGCGCCTGTACTCAACCAGCCACCTTTGGCGGCGGCCGAGCCAGAGCAGTCGAACGAGACTGCTCAACAACAGGCACCGGGAGAGGCCGACCCAGGCTCTTCTGCCAACTTGGATGATCAGAAGAGGGCGGCACCACCTGCGGCGACAGACCAAGAAATGTCCTCTGACGCGCCTGTACTCAACCAGCCACCTTTGGCGGCGGCCGAGCCAGAGCAGTCGAACGAGACTGCTCAACAACAGGCACCGGGAGAGGCCGACCCAGGCTCTTCTGCCAACGTGGATGATCAGAAGAGGGCGGCACCACCTGCGGCGACAGACCAAGAAATGTCCTCCGACGCGCCTGTACTCAACCGGCCACCTTTGGCGGCGGCCGAGCCAGAGCAGTCGAACGAGACCGCTCAACCAGCTGCGCCTCCTGCTAAACAACAGGCGTCAGTAGAGGCTGATCCTGACACTTCCCCCGTCGCTGAGGATCAACCGATAATCGCACCGGCAGGGCCTGCTCAAAACGAAGACAATGAAAGCCTTTCAGACGTGGAGGTTCCGGTGTCAGGGGCCCTGCCGCGTCGTTTCACCACAGCACGCAAGACCGGCCCGGCGGTCGTACCGGATGCTATCTTCGTAGGGGCTCCGATAGGTGCCGACGAGCCACAACTGCAAGCCAGCAACATCGACAAAGACGCTCTGTTGGCCCGCATCAGCCGTGAGGTTCAAGGTGACAATTCGGTGCTCTACAAGCTCGATGCCGAGCCTGCTTTCGTTGACCGTGGGTCGCGCCTGGAGATGGTCCAAGGCGCAGGTCAGGAAGATGAGAAGGTAATAGCTGCGTTGCTCACGGCAGCACAGTTCTACCGGGGGCGCATCGAACTGACCGGCAGTGACGAATTCAAGGCAAAAGCCATCGAGCTGATTGCTCAGCACCAGATCAATGTGGAGATGAAGAACCCTGCGCAGCAAATGTTGCTGGACGATGCCCGTAACGCGTTGAAGCAGCCACCTGTAACGCTTGATGCCATTCATGGTGATACCCCACCGCCGTATGGTGGTCCACAGCCGTCACAGGCGAAGCCCTCGGCACCGCAACCTCAACAAGCCGCGCCGGCACCGGTGCATTCGTCTGCGCCCGCGCCGGCGAGTACCGCTTACCAGCCTCTGGAGGTTGAGGGTCTGCAACGGCGGCCGGCTCAATCTGCCCCACAGGCACAGGCCCCGCAAGCGGGCGTTGCACCGCAACCTCAACAAGCCGCGCCGGTACATTCGTCTGCGCCCGCTTCGGCAAGTACTGCTTATCAGCCGCTGGACGTTGAGGGTCTGCAGCGGCCACTGGTTCAACCTGCACCACCGGCACAGCCGGACGCACCGGTCATCAATCCGCCCTCGGCAGCTCCAGCATCGGATCAGCCTGCAACGTCAGCGAATCAGCAGGTGTCGCCCGCCATCCATCAGCCTTTCCAGGCGGCCAAGGATGGCGTGACAGGCAAGATCCTCAAATTTGGCCAGAAGCCGTTTCGTTTTGAGCCAGACAAGCCCGAGAGCACCTTCATCACACTGCGTACCGTGAACGGTGTTCAGACTTTTTGGGGCAAGGAGCTGGCGGGGCTGCTGCGCCAAACCCGTGTGCAGCCAGGCAAGATGGTGACGTTGCAGTGGCTGGGCAATCATCCGGTTACCGTCAAGGTGCCCCGCAAAAACGAGCAGGGCGTCACCGTGGGTTACGACGATAAAGACGTTCATCGCAACCAATGGGCCCTTAAGGTAGAGGGTAACCCCGCAGTGCGTTCTGGCCAGGATGAGGGCGTCAAACTCGGCGCCTATGACGCCGGGCGTTTCGCCGTGGTGCAACAAGCCTGGCTTGCGCAACTGGGCGTGGAGGCTCCCTTGCCCACGCCACCCACGGATGGCCTGTATTGGTTGACCCCAAACGGTGAAGGCAGCGCAAAAACGGGTGATGAGCTGTCAGCCCCTCGGCCGCCGATCGACCCCAACAACACAGCGGGACAACCCGTCATCAGCAGTTGGTCACGGGATGGCCATCTGGACATGTACCTGGTGCGCGGCGATGGTCCCTATCTGCAAGGTGTGGTGCGTCAGGGGGATCAGATGCAGCATGTATTGGTGAGTCTTCCAGGCCGTGACGATGGGCCTTCGATGGTGTTTAACGCCATTACCCCCGAGGGACTGCTGCCGATCGGCACGGGCAATGGCATCAACCGCTCTGGTGGCGAGCCGGTGTCGAGAGAGCACATTGCCTTCAAGCTTGAAGGCGACAGCGCTGTGCGCATTGGCAAGCTTGATGCGCCTGGCGAGGTGCCCCCGACCTTGCACAACCTATTGGGCTTCGATCAGCGCTGGAAAGAGGAAAACACCCTCCCAAAGTCAGCTCCCACAGCGGCACCGTCAGTACAGCCGAGCGATCCACGTCCGGTGTAA,MKIETAPRTSEYPVWLAVPPDDREKARLSAGRLSDGRAAIAWNKEEKLWFARPGCDLDRITAWLPDPSRRAGGGDAESEFLDVLTQAGLVVKGMPVMDGSRQRVATVDDKHGKKSGVYCGFLDRRPAGWFINYHRADSPKDVTNWAATGGESDPITRLHIRAGAKQAQEDAARDRAVTYAKQTLAAKRLYDRLPAADPAHPYLVRKGIPPTPDIRQTRNGALVVPFFNASGTFKTLQYIPPEGEKFLFKDAPKQEHFLVVGGSLDPVNPILYAEGYATARSLNLATGLPVVMTIDAGNMVAVAKVLHQQYPDSRHLFMADFDHAKDVNKGLIMANEAAIAVGGQVLYPTFNDAEIARGFTDFNDLHQSRGLDAVREQTAPLIRPYEEVTTMPTDSNTQSPDNTAQKVATPAQETLELDAAPAASIQVPDQSAPPQTRSAQPVASEASSVESQSPETAQVTEAPVGIDDAQVSTQPPLALSPAEQLASVEADPDASAIVDEQPKATMSVATDRNTPSDAPELTQPTSAEVVPEQSNETAQPDARSAQQQAPGEADPGSSANVDDQKRAAPPAATDQEMSSDAPVLNQPPLAAAEPEQSNETAQQQAPGEADPGSSANLDDQKRAAPPAATDQEMSSDAPVLNQPPLAAAEPEQSNETAQQQAPGEADPGSSANVDDQKRAAPPAATDQEMSSDAPVLNRPPLAAAEPEQSNETAQPAAPPAKQQASVEADPDTSPVAEDQPIIAPAGPAQNEDNESLSDVEVPVSGALPRRFTTARKTGPAVVPDAIFVGAPIGADEPQLQASNIDKDALLARISREVQGDNSVLYKLDAEPAFVDRGSRLEMVQGAGQEDEKVIAALLTAAQFYRGRIELTGSDEFKAKAIELIAQHQINVEMKNPAQQMLLDDARNALKQPPVTLDAIHGDTPPPYGGPQPSQAKPSAPQPQQAAPAPVHSSAPAPASTAYQPLEVEGLQRRPAQSAPQAQAPQAGVAPQPQQAAPVHSSAPASASTAYQPLDVEGLQRPLVQPAPPAQPDAPVINPPSAAPASDQPATSANQQVSPAIHQPFQAAKDGVTGKILKFGQKPFRFEPDKPESTFITLRTVNGVQTFWGKELAGLLRQTRVQPGKMVTLQWLGNHPVTVKVPRKNEQGVTVGYDDKDVHRNQWALKVEGNPAVRSGQDEGVKLGAYDAGRFAVVQQAWLAQLGVEAPLPTPPTDGLYWLTPNGEGSAKTGDELSAPRPPIDPNNTAGQPVISSWSRDGHLDMYLVRGDGPYLQGVVRQGDQMQHVLVSLPGRDDGPSMVFNAITPEGLLPIGTGNGINRSGGEPVSREHIAFKLEGDSAVRIGKLDAPGEVPPTLHNLLGFDQRWKEENTLPKSAPTAAPSVQPSDPRPV,"similar to GP:4903116, SP:P27190,  and GP:4929009 ;",,,,,,,,Periplasmic,Class 3,,,,,,,,,,PF03154,"Atrophin-1, Atrophin-1 family. Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteristic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity..",COG4643,"COG4643, Uncharacterized protein conserved in bacteria [Function unknown].",Function unknown
NC_004633,Plasmid_pDC3000A,PSPTOA0050,NP_808708,29171524,Protein,52006,52359,traL-2,,traL protein,,,ATGAAGAAAAGCATGTGCGGTGCACTGCTGATGGTTGTGTGCTGCCTGCCCGTTGTGGGAAACGCAGCAGTGTGCCGCTCAGGACAAGCGGCCAGTGTGGGCAGTCAGACTGCGTATGAGCGGGCCAAGAAGGCGTCGGACGTGTGGGCAGAGCGCGAGCGCACCGTCTCAGACGAACTCCAGGATTGCTTGTCGCGCATTCGCACCACCAGCATCAGCCTTCCCTCGTTTCCAAGCCTGGAAGACCTGATGAACCAGGTGGCCGATCAGGTATGCCAGGCGGCGGTGGACAAGATCAACAGCCATATCCCCAGCGGCTCGGACCCTTGGCAGTCGGTAGGAGGTTCATTGTGA,MKKSMCGALLMVVCCLPVVGNAAVCRSGQAASVGSQTAYERAKKASDVWAERERTVSDELQDCLSRIRTTSISLPSFPSLEDLMNQVADQVCQAAVDKINSHIPSGSDPWQSVGGSL,similar to GP:4512511 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0051,NP_808709,29171525,Protein,52356,53063,traM-2,,traM protein,,,GTGACTGACTCATCAGAGAAGTTGCTGCCCGTGGAAGAGTCTCTGGAAATACCTCACCTCCCCACGGCGGAAGATCAGCACACGTTCGAGCATGCCATGCAGTTGCAGCGTGACCGTGCGTTAGGTGCGGCATTCGCCCATCGCTGTCTGACCGCAGTGCTCTGGATGGCACCTGCACTGGTGCTATCGGTCAGCGTGAATGGCTACTTGGGCTGGCAGGTCGCTCATCCTCCGGTGAAGTACTTCGCGGCCGAGGGTGGTCGCGTGACCAAGATCATCCCTACGGACAAACCAGGGCATAGCAGGCGTGACGTGTCGGCCTTTGGGGCCGACACCATTCGCCAGAGCTTCACTCTGGACTTCGTGCATTACCGCGATCAGATGACCCAACTGGGCGAACGCTACTCGGAAGTGGGCTTCCAGGACTATTACAAAGCCTTGGTGGCCTCGAACCTGCTCAAAGCGGTCAAGGATCAGCGCATGAACCTCTGGGTAGACGTTGGCCCAGGTGTGATTCGCGGTAGCGGGACGATCGGGGACAAGTTTGCCTGGGAGTACCAGTACCCGGTGACTTTGAAGCTGGATGGTCAGCAATCGGGCAGTCCGCCTCAGCGCTTCATTTTTACTCTGCGCATTCAGCAGACGGACGTACGCGTGAAAAACGCAGGATTGGAAGTCACGCAAGTGATTACCACCAACGCTAACTGA,MTDSSEKLLPVEESLEIPHLPTAEDQHTFEHAMQLQRDRALGAAFAHRCLTAVLWMAPALVLSVSVNGYLGWQVAHPPVKYFAAEGGRVTKIIPTDKPGHSRRDVSAFGADTIRQSFTLDFVHYRDQMTQLGERYSEVGFQDYYKALVASNLLKAVKDQRMNLWVDVGPGVIRGSGTIGDKFAWEYQYPVTLKLDGQQSGSPPQRFIFTLRIQQTDVRVKNAGLEVTQVITTNAN,similar to GP:4903116 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0052,NP_808710,29171526,Protein,53120,54178,traN-2,,traN protein,,,ATGAAAACTTCAATTGCGCTGGCCCTATGGCTAGCGGCAAGCGGCTACGCCTGGGCGGATGAAACTGTCAGCCCAGAGGCCGCTCCGGCTAAATCTGCGGTTCCCCCCTCTGCCCCTGTTACGCCTGCTGCGGGGGCTGCACCTTCGGGCTGGGCTACGGGCGTGGGTGTAAACCCAGCAGCACAGAAAGCCGGATCGCCGGCACAAGGTAATGGCCCTGTGAATGCAGCACCAGCTCAGCAACCGTCTGGAAATGATCCGCTCCCTCCGCCGCCATCCGAGCTTTTTCAAAAGGCTCAGGACAGCGTTTCTCCGCTGACTCCCCAAGAGATTCGGCAACTGCGCGGGCAGGTTGGAGAGGTTGACAAGGCCATGGCCGCACCGCAGGTCGCCATTGTGCCGAGAATCAGCGCACAAACGGTGAATCTGTCGCCGGGGGCCAGTTTGCCGCTGGTGCGCACGGCGGTGAACTACCCCACTTCCTTGACCTTTATCGACAGTACCGGCGCGCCGTGGAACCTGGGCGCCGCGCCCATCAGTGGCAACCCCGATATCACGCCGTATTACGTGCCCAATAGCCCGGTCATGGTCTTGTACGCCGCAAAGCCTTTTGCCAGCGGAAACGTCACGGTTTACCTGAAAGGTTTGGCCGTGCCGATCATGCTCTACGTCAGCAGCGGGGAGTCGGATACCAAGGCCCAGACGTGGGCAGTGGACGCTCGCCTGGACTTGCGTGTGCCCAGGCGTGGGCCAGGTGCTCAGCCAGGCGCCGCTCCCGAGGTCCGTATCGGCTTGCACGATCGGGTGCTGCAGGGGTTTCTCGATGGCGTTCCACCCAAGGAGGCCAAACAGCTCAAAACCACCGGCAACGTGCCAGACACCACGGTGTGGCAAATGGGTGACGATCTGTACATCCGCACGCGGGCTGATATCCGGGACGAGTTCGAATCCACGTTGTCGTCGGCAGACGGTACGCATCTCTGGAAATTACCCGTGACGCCCTATGTGTCGTTCTCAGTCATGGGCCACACAGCGGCCCTCAACGTCGCCTTGGAGTAA,MKTSIALALWLAASGYAWADETVSPEAAPAKSAVPPSAPVTPAAGAAPSGWATGVGVNPAAQKAGSPAQGNGPVNAAPAQQPSGNDPLPPPPSELFQKAQDSVSPLTPQEIRQLRGQVGEVDKAMAAPQVAIVPRISAQTVNLSPGASLPLVRTAVNYPTSLTFIDSTGAPWNLGAAPISGNPDITPYYVPNSPVMVLYAAKPFASGNVTVYLKGLAVPIMLYVSSGESDTKAQTWAVDARLDLRVPRRGPGAQPGAAPEVRIGLHDRVLQGFLDGVPPKEAKQLKTTGNVPDTTVWQMGDDLYIRTRADIRDEFESTLSSADGTHLWKLPVTPYVSFSVMGHTAALNVALE,"similar to GP:4903118, GP:4903117,  and GP:4903117 ;",,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0053,NP_808711,29171527,Protein,54184,55542,traO-2,,traO protein,,,ATGGCAAACGAAAACGATGCCAAACGCGACATGAAACTCACCGCAGCGCTGGTTGGAGGCGCATTGGTGGTCGTTTTTGGCGGTGCCTATTACCTTTGGGACTGGCTGGCCAGGCCTGAGCCGGCGCAATCGAAGGTAGACCTGGGTCGAGTAGCACAAGCTTCGCGCAGCCACAGCACTGAAAGCCCTGCCTATCGCGATCTGCTCAAGCAATACAACGAGGAAGGGGCCAGCACGGCTAAAAACGAAAACAGCAGCTTCATTGCCAGTATGCCCATGGAGCAGACGAGCGTGATGCTGCCTGTGACGAAGGCCAAGCCTGCCCCTCAGGCAGAGCCTACCGCCCGGCGTAGCCATACTCGTCAGGACGAGAACTCAAAAGACTCCGAAAAGAAGGAAGACCCGCGTCTGAAGGCATTGCTAGAACGGATCAATCCTGAAAAAAAAGCCGAAGAGCGGCAGTCCGGACTGGTCTTCGCCCATGTTTTAGGGGGAACTAACGCTTTGAATGGCTCAGGCGATACGAACACGGGTTCTGCTGGAGGCTATGACAGCTGGAGTGAAACCCTGCCGGGAGGTGCCAAGCTGAAAACCGCTTCCATGAAAAGCACCGCAGAACCCTATTCACCTGTCGAAGTGGTGCCGCCCTACTGGCGCGGGGCTGGCGTGATCGATATCGGTGTGGACTCGGACAACAGCACCACGCCGGTGCTGGGCAAGCTGTCCGGGCCTTATGCCGGGGCTGTGCTCAAGGCACCCGAGGGCGCCAGGTTGGCCGGTGATGGTGTGGTGATCCACTTCACTGAAATGGCCTTCAATGGCGTCAATTACAAAGTCGATGCCTATGCGCTTCAGGACGACACCCTGTTGGCCAACGTGGCTTCTGAAGTGAACCACCGCTACATGTCACGCATTGTGTTGCCAGCGGTACTGGGCGGCATTGGCAATATCAGCGATATGTATTCGCAGGCCAATACTCAGGTCCTCAGCAATGGCTTTTCCACCCAGACCGCCCGACCGGGCATGCCGGATGGTACCGCCGTCGCCGGCACCATTCTGGGCGGTGCCGCCGGTCAGGCGGCCAAAGTGCTGACTGAAGACGCCGCCCGCACCCCGGCTACCCAAGTCAATGTGTTCAAGGGGCAGGTGGTCGCGATTCAGTTCATGCGAGGCGTATACGCAGGTGATGCCGTTGCCCCAGGGCGAAGCGGTGAAACGGTGCAACCTGCGGCTCCCGCTCAGGCCGTCATGTCGGCACAACCCCAGTCCCCAGCCCAACCGCTGACGCCTGATCAATGGCGTGCGCAGACCCAGACGCGAATCCAGGCGCAGCGCAAGCTGCAGGAGAGTCAACAATGA,MANENDAKRDMKLTAALVGGALVVVFGGAYYLWDWLARPEPAQSKVDLGRVAQASRSHSTESPAYRDLLKQYNEEGASTAKNENSSFIASMPMEQTSVMLPVTKAKPAPQAEPTARRSHTRQDENSKDSEKKEDPRLKALLERINPEKKAEERQSGLVFAHVLGGTNALNGSGDTNTGSAGGYDSWSETLPGGAKLKTASMKSTAEPYSPVEVVPPYWRGAGVIDIGVDSDNSTTPVLGKLSGPYAGAVLKAPEGARLAGDGVVIHFTEMAFNGVNYKVDAYALQDDTLLANVASEVNHRYMSRIVLPAVLGGIGNISDMYSQANTQVLSNGFSTQTARPGMPDGTAVAGTILGGAAGQAAKVLTEDAARTPATQVNVFKGQVVAIQFMRGVYAGDAVAPGRSGETVQPAAPAQAVMSAQPQSPAQPLTPDQWRAQTQTRIQAQRKLQESQQ,similar to GP:4903118 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0054,NP_808712,29171528,Protein,55584,56249,traP-2,,traP protein,,,ATGCCGGCTCCCACCCAGGCTCCCAGTCGTAGCGTGTGGCAACGCCCGATCGTCATGGGGCTTTCACTTCCCTGGCTGATCGGCATTGCCCTGGTATTGGCACTGGCTGGCTGGTACTTGTTTGGCCCCGAGAAAACCGCGTCAGTCAATCGTCTGGCCTTTGAAAATGACTTCGAACAGCAACCTTTGCCCGCTGAACAGTCGAGTACCCCCCCTGTTGCAGCCGCTGCCGAGTCTGATTTGGGCCAGTTCAAGAACGAGGTTGCGGCCATGATCGGCGGGGTGCGTACCTACGCAGAGGTGAATCGCACCGCGATCCAGCGCTTGTCCGAAACGATCAAGACTCAGGGGGTTGCACAACAGGCGTTGCAACAGCAACTGGCCGAGGCACAAGCGCAAAACAGCGTCTTGTCAGCACGTCTGTCCTTCCTTGAAGGACGACCCGGCGCGACGACCACGACACAGCAGGCCAGCAAGCCAGTCGCTAAAACACGTTCGCCGTTGAATGGTATGCGCGTGCAAGCCATTCAGAACGGCATGGCCTGGGTGTACTGGCAGGACAAGACCTGGGCCGTCAGTCCCGGCGAGAAACTGGGCCAGGTGACTGTCACCGGCATCAATCCCCAGGCCCGCGAAGTGCTGACCAGCGCGGGCACAATCAAATGA,MPAPTQAPSRSVWQRPIVMGLSLPWLIGIALVLALAGWYLFGPEKTASVNRLAFENDFEQQPLPAEQSSTPPVAAAAESDLGQFKNEVAAMIGGVRTYAEVNRTAIQRLSETIKTQGVAQQALQQQLAEAQAQNSVLSARLSFLEGRPGATTTTQQASKPVAKTRSPLNGMRVQAIQNGMAWVYWQDKTWAVSPGEKLGQVTVTGINPQAREVLTSAGTIK,similar to GP:4512507 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0055,NP_808713,29171529,Protein,56258,56800,traQ-2,,traQ protein,,,ATGGACGGCAGTACTGACGCGATTCAAATGTTGGTCAATCTGTCCCACAACCTGCTGACTTCCTTAGTCAACTTTGCCTTCACGCTGGGCAGCTTGTTTGCGGTCACTGGCGCTGTGAGCTACCTCGCCACTCACGCCAGTGCCGCGCGCAAAGCACCTGGCCATGCGGAAGGTGGCGGCAAGGTCATCGCTGTGTTGTTGCTCTGTGGAGGCCTGGCCGGCCTCGATCAAATGATCGGTGCTGCCGCTCGCCAGTTGGGTTGGCAGGGCGCGACCTTCGATGCCATCAGCTACGTGGACGTGGGCACCTTTGGTGTCGCAGCCGATGCGGCCAATGCCGTGTTAAGTCTGGTGCGCATGCTGGGCGTCTGGTTCGCGCTGCAAGGCATGTTGTCCTGGAAACGCTCGTTCAAGGACGGTCATACGGGCCTATCGGCCAGTCAGGACGTTTCAAGCGGTACCCTCAAGTTTGTCCTGGGCGTTTTCTGCGTATGCAATCCGTACCTGCTTAGCGCCCTGCAAAAAACCCTCGGCCTGCTGTAA,MDGSTDAIQMLVNLSHNLLTSLVNFAFTLGSLFAVTGAVSYLATHASAARKAPGHAEGGGKVIAVLLLCGGLAGLDQMIGAAARQLGWQGATFDAISYVDVGTFGVAADAANAVLSLVRMLGVWFALQGMLSWKRSFKDGHTGLSASQDVSSGTLKFVLGVFCVCNPYLLSALQKTLGLL,similar to GP:4512506 ;,,,,,,,,Cytoplasmic Membrane,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0056,NP_808714,29171530,Protein,56876,57271,traR-2,,traR protein,,,ATGTCCAAAGACGTAATGCTGTGCGCTGCTGTTCGCCTGTCGATTTTCAAAGATGGTCTGCGTCAACACATATTGAAAGGCCTGGCGGCAGCGATAGCTGCCAACCCAGTGCTGGCTTTTGCCGGTGCCGGCGGTGCCGACATTGCCGGGATGGGTAATTCGGCGGCAGTGGGCGCCAAGTCGTTGCAAAAGAATGCGCTGACCATTGCTCAGTTTGTGGGGGTAGTGTTTGTGATCACTGGGTTGGTTGCTGCCAAGAACAAAAAGGACAACCCTCAGATCAAAACTGGCCATATCGTGGGGTCCATCCTGTTTGGCGTGTGCCTGGCAGTGATCCCGGAAATCATCAAGCGCTCGCAAGCTCAAGTTGGCCTGGCACCCGTGGATGTGGGCTAA,MSKDVMLCAAVRLSIFKDGLRQHILKGLAAAIAANPVLAFAGAGGADIAGMGNSAAVGAKSLQKNALTIAQFVGVVFVITGLVAAKNKKDNPQIKTGHIVGSILFGVCLAVIPEIIKRSQAQVGLAPVDVG,similar to GP:4903121 ;,,,,,,,,Cytoplasmic Membrane,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0057,NP_808715,29171531,Protein,57590,57315,,,hypothetical protein,,,GTGCTAACAATTCGCTGGGCTGATGAGGCCTCCACCGACTTGGTGGAAATTATCGACTACATCGAGCAGCGTAACCCCATCGCCGCCGAGGCGCTGAACGCCAACATATTGAAGGCCGTTGAAGGCCTTCCATCAGCACCCTACCTGTTCCGCCACGGTCGCGAAACCGGAACGCGTGAATGCGTTTTGCATCCCAACTACCTAGTGGTGTATCAGGTAGGGGCCGACACTATCGACGTGCTGCGCATCCTACACGCCCGTCAGCAATACCCTTGA,MLTIRWADEASTDLVEIIDYIEQRNPIAAEALNANILKAVEGLPSAPYLFRHGRETGTRECVLHPNYLVVYQVGADTIDVLRILHARQQYP,identified by Glimmer2 ;,,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,PF05016,"Plasmid_stabil, Plasmid stabilisation system protein. Members of this family are involved in plasmid stabilisation. The exact molecular function of this protein is not known. This family also encompasses RelE/ParE described in..",COG3668,"ParE, Plasmid stabilization system protein [General function prediction only].",General function prediction only
NC_004633,Plasmid_pDC3000A,PSPTOA0058,NP_808716,29171532,Protein,57768,57568,,,hypothetical protein,,,ATGAGCACCCAACTTTCCCCCATCGTTTCCGAGTTCGAAACACAGGAACAAGCAGACAGCTATGACCGCTGGTTTCGGGCCAAGGTGCAGGAAGCCATGAACAGCACTAAGCCACGTTTGCCCCACGACGAGGCAATGGCGAAGGTGCAAACCGCCCTAGCAGAGCGAAGGAAGGCCCGTGCTAACAATTCGCTGGGCTGA,MSTQLSPIVSEFETQEQADSYDRWFRAKVQEAMNSTKPRLPHDEAMAKVQTALAERRKARANNSLG,similar to GP:13259619 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0059,NP_808717,29171533,Protein,57953,58612,traT,,traT protein,,,ATGGATGTCGATCTATCAGCCCCACCCTTGAAAGCAGCGTTTCAAGCTGAACGTGAGCAACCCTCGCTGACCCCCCTGATGCTCGATGTCAGCGGTGATCCTGAAACGCCGGTACCGGCGGCTATGCCGGGCGAGCAGTGCGCTTGCTGCGGACTGTGGACCCAAAAGCTGTGGCAGGGGGCTCGATCAGGGTTTACCGCCTCCCATGCGGTTTGCACCCTGTGCTACCTGGCCGGGCACCTGGACAGCCCTACGGCGGCTCACGGCGTGCTGGCCTACCTGCCCGGTATGGCCATGACGGATGTGCATCACCTGCAGCGCCGTGCGCTGATTGCCATTCTCGGCGGTACCCGCACGCAGCGTGCCCAAGGCAAAAGGGTTCTGCTCTGGCTGGCTCGACATGGCCGTGAGGTGGAACAAGCCTGGGGCACGACACGTGCCGGCGAATTCGCCATGGCCTTTCAGCGTCTTCCTCCTCACAAGCGCTCGACCCTTCGAAACCGCCTGGAAGGCTGTGCCCTGATCCTGCCGGCGGACATGTTCGAGGATCTGTCGCTATTACTGCCCACCGGCAAAACGGTCGCGGGGGCACTTTCCTCCCGCAGCTGGGACACCTATAAACGGAGTGACTTTTATGCCGAGCTTGATCCGTTGGGTTGA,MDVDLSAPPLKAAFQAEREQPSLTPLMLDVSGDPETPVPAAMPGEQCACCGLWTQKLWQGARSGFTASHAVCTLCYLAGHLDSPTAAHGVLAYLPGMAMTDVHHLQRRALIAILGGTRTQRAQGKRVLLWLARHGREVEQAWGTTRAGEFAMAFQRLPPHKRSTLRNRLEGCALILPADMFEDLSLLLPTGKTVAGALSSRSWDTYKRSDFYAELDPLG,similar to GP:4512503 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0060,NP_808718,29171534,Protein,58596,61643,traU-2,,traU protein,,,TTGATCCGTTGGGTTGAAGACCTGATCACAGAAACCTCCCGGTTTGCCGTATCACGCGATCTGCCCGACTATTGCGACTTGAACACGGTACTGCGTCTGACGGACGACGATCGCACTCGCCACCCAGCCCTCAATGCCCCGTATGTACTGGTCAACGACGATGGCGATTACTGCTCGGTGTATGCCGTTGCCGGCAGTTTTTGTGACACCGACGAAGCGGCACCCCTGGAGGCCCCTTATTCCTGGGCCGGCCGCTTGGAGCGCATGATGCATGCGCTGACAGCCCACTATCGCCGACATGGGCACAAAATCAGCCTGGTGTTCGACGATGACCCTGATCGAGGCCGCGAGGACGTCGAACGCCTGCTGGCCCCTCAGTACGCTTCTGTCAAACGGACCGGCATCGACTTGACGCCGATCCTGGACGAAAACGTTGAAAAGCTGGCCCCCTGGGTCTCTCGCGAACGCTGCTACCTGGTGTGTTACACCGGACGCAAGGCGCTCTCTGCGCATGAACTGATCGACGAAAATCGCCGTATCAAGCAATTGATCGGGCAAAGCCCGGATGCACGGTTTGGACAAAATCCGGTCCTGGCTGAAATGGCCGGCCTGAAAATTCGCCACGACGCCTTCATGAGCGCTGTGGAAGCTGCCTTTAAAGATGATGGCCAGGGTGTGCTGCTGGAACTGCTCGATGCCCATGCAGTGGGCCAGGCGCTGCGCTCTCAAGTGGACCGGCTCGGTACCAGTGAGCATTGGTACCCGCTGCTCCCTGATGATCCGATCACCCCGCATGGTGTGCGTAACGGCGACGATCACACACCGTTTCTGGCCCCGCAGCTGAAATTCCAGCTGATGAACCAGGACATGGAAACCAACGGCAGCAAGCTCTGCGTCAATGGGATGTGGCATGGCACCTTGTCTGTCGTCCTGGGACCGCAGACGCCGCAGACCTTTGCCAAGCTCAAGGCGCTGGTCCCTCGCGGCGTGCCTTGGCGCGTACGCATGGACCTGATGCCTGGGGGCATGAAGTCGCTAGGCATGAAAAAAGGCACGTTGGACTTCATGGCGTTTGTGCCGCCGCTTCGGCCCATCTGGAACTCCATCGAAACGTTGACAAAGGTTGAGCAACAAGAGCCGGTATGCGTCATGACGATCATGGCCTCCACCTGGGGTGACAGCCAGGCCGCAGTGACGCGCCATCTGACGCTGCTGACCCAGGCCTTTCAGGCATGGGGAGTGTGCGAGGTGACGCAAACCTTCGGCAACCCGGTACGCGCATGGGCCTCGACGCTGGTGGCTTCCAGCAAAGGCAGTGGCCCGAACCTGTTGTATCCGCCGCTTTCAGAGGCGCTGAACCTGTTGCCGCTGACCCGCCCGGCCTCGGCTTGGGAGGAAGACGGCAACGCCTTGTTCGCTACGCTCGATGGCAAGCTCTATCCGGTCGGTCTGGCCACCCCCAAGCAGAACAAGCTCACCAGTGTGGTCACCGGCTCTTCCGGCCAGGGCAAGTCGGTGCTGCTGAACAAGCTGGGCAATGTCACGGTGTCCAGCGCCCAGCAGCGATTACCGTTCATGGCGGGGGTGGACAAAGGTTTCTCGATGCAAGGTCAAGTCGCCTTGCTGCGCGACAGTCTGCCGCCGGAGCGCAAGGACGAGGTCGTGGGCATTGTGCTGCAGAACAGCCCCAAGCATTGCCGGAACCTGTTCGATATCCAGCTGGGCGCGCGGTTTCCGATCGCCCCCGAGCGTAACTGGATCATCAGCATGCTCACGGCCATGTGCATTGACCCCTCTACCGGCAATCCGCCAAACGAACGCGATACCCGGCAGATACTGGACCGCGTCATCAGCATGGCCTATACCGCCAATGCCGAAAAAAGCCCCAGAGCCTGGGCGCGCGGGGTCGTCCCCGAAGTGGACACTGCCTTGGATAAAAGCGGGTTGATCGAGCGCTATCCGGCCCAGTGGTGGGATAGCAGTACCTGGTATGAGGTGCGCGATCTGTTGTTTGAAGCAGGCTTTGTTAAGGAAGCGCAGCTGGCCCAGTTCGAAGCAGTGCCGGAACTGGCCGACATGACCACCTTCCTGAACCATGAAGACGTAGAAAGCGCCTATGGTCGGGTGCAACGTGATGGCAGTCAGGAGCTGTTGCTGGAGTACTTGCACCGCTGCATGACTGACGCCTGTAGAGAATTCAAGATGCTGGCCGGGCGTACGCAGTTCTTGATCAGTCCACGCACGCGAGTGATCGCGATCGATCTGAACAATGTCATGGGTGATAACACCACCAATGCTGGCCACCTGAAAACCGGAATCATGTTCCTGTTTGCGGGCCAGGTGGCTGGGGGCGATTTTGTGTTGCCTCAGTACAGGGATGAGCTGTTGGAGGCGGTGCCCACGCTTTACCACCCCATGCATCTCGACCGCTTGGAGCAACTGGATCAGGAGGTCAAAACCAAGGTCTACGACGAGCTGCACAATGCGAAACAGGTGCCCTTCATCTTTCCCATGCTGGAAACCCAGGATCGTGAGCAACGCAAATTCGGCATACGCACGGTGTTGTCCTCGCAGTACGTGAGCGACTTTCCCGACGCCATTCTGAATTCGGCCAACTCGCTGTACATGATGGAGGTGGACCCCAAGGACGAGAAGCTTCTGACCGACACCATCAAAGTGCCCAAGGTCACTCTGCAGCGCTTTCAGCGTTTAGGCTCAGGTCCAGCAGCGGATGGCAGCGGCGTACCGTTTTTGGGCGTGTTCCGAATCAAGGGTGGCGGCACCCTGGCGCGCATTCTGAAAAACGCCATGGGGCCCCTGGAACTATGGGCGTTGGGCTCTTCACCGACCGACAGCGCCCTGCGCAGGTTGTTGTATGAAGCGGTCGGCGGTTCCACGGCTCGCGCCATCCTGGCCGAAGCCTTTCCCCAGGGCACGGCAGAAAAACTCATCGCGCTGCGCCAGAAGCAAGCCGGTGAAGTGGATTCCAACAACGTGATTCGCACGCTGGCCAACGAGTTGATCAAACGGCGTGGTTACAACCTCTAG,MIRWVEDLITETSRFAVSRDLPDYCDLNTVLRLTDDDRTRHPALNAPYVLVNDDGDYCSVYAVAGSFCDTDEAAPLEAPYSWAGRLERMMHALTAHYRRHGHKISLVFDDDPDRGREDVERLLAPQYASVKRTGIDLTPILDENVEKLAPWVSRERCYLVCYTGRKALSAHELIDENRRIKQLIGQSPDARFGQNPVLAEMAGLKIRHDAFMSAVEAAFKDDGQGVLLELLDAHAVGQALRSQVDRLGTSEHWYPLLPDDPITPHGVRNGDDHTPFLAPQLKFQLMNQDMETNGSKLCVNGMWHGTLSVVLGPQTPQTFAKLKALVPRGVPWRVRMDLMPGGMKSLGMKKGTLDFMAFVPPLRPIWNSIETLTKVEQQEPVCVMTIMASTWGDSQAAVTRHLTLLTQAFQAWGVCEVTQTFGNPVRAWASTLVASSKGSGPNLLYPPLSEALNLLPLTRPASAWEEDGNALFATLDGKLYPVGLATPKQNKLTSVVTGSSGQGKSVLLNKLGNVTVSSAQQRLPFMAGVDKGFSMQGQVALLRDSLPPERKDEVVGIVLQNSPKHCRNLFDIQLGARFPIAPERNWIISMLTAMCIDPSTGNPPNERDTRQILDRVISMAYTANAEKSPRAWARGVVPEVDTALDKSGLIERYPAQWWDSSTWYEVRDLLFEAGFVKEAQLAQFEAVPELADMTTFLNHEDVESAYGRVQRDGSQELLLEYLHRCMTDACREFKMLAGRTQFLISPRTRVIAIDLNNVMGDNTTNAGHLKTGIMFLFAGQVAGGDFVLPQYRDELLEAVPTLYHPMHLDRLEQLDQEVKTKVYDELHNAKQVPFIFPMLETQDREQRKFGIRTVLSSQYVSDFPDAILNSANSLYMMEVDPKDEKLLTDTIKVPKVTLQRFQRLGSGPAADGSGVPFLGVFRIKGGGTLARILKNAMGPLELWALGSSPTDSALRRLLYEAVGGSTARAILAEAFPQGTAEKLIALRQKQAGEVDSNNVIRTLANELIKRRGYNL,similar to GP:4903124 ;,,,,,,,,Cytoplasmic Membrane,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0061,NP_808719,29171535,Protein,61667,61903,,,hypothetical protein,,,ATGAATAACGAAAATGATTCCCTGCACGACGCTTTGCGTGAAGCGAGCCCGGATCAATTACAGGCTTTGGCGGAGCTGGCCACCTGGATGGCAAAGCACCATCGGTTGCTGGTCGTTGGCCGGTCAAACGGTATTCGGATCGGCGCTACGGATAAGGTCATCGCGTTCATGCGCGAACACCTTGACACCGAGCTGGCGGATACGGTCTCGGAGAACCTGGTGCGTGTTGCGAACTGA,MNNENDSLHDALREASPDQLQALAELATWMAKHHRLLVVGRSNGIRIGATDKVIAFMREHLDTELADTVSENLVRVAN,identified by Glimmer2 ;,,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0062,NP_808720,29171536,Protein,61946,63160,traW-2,,traW protein,,,GTGAAAAAGCGCTATGCATTAACGGCGATAGCCGTGGGGGTACTGCAAACCCAACAGGTCCTGGCGTACGTCCAGCCGGTGGCCGTCACGGCCAGCGTGCCCATTACGGCGCAGGTAATGCCGGCCATGGCCGGCCTTCAAGCTACCCTGGCGGAAATCCTGACCACTGAGACACAAATCGGCACGGCCATCGTGCAGGCCAGTGACAAGCAAGTCGCGGTTATTTCTGAGGCCGCACGTGCCCAGCGCGAGGCCGATATTTTTGGCCGTCAGACCGAGCGTCTGGAGCGTGCCCGAGAACAGTACTCGGTCCCTGACAGCATCTGCAGCGAGTCGGCCTCTGGAGTCGCGGCCACGGTGGGGAAGGTGAGCCGTGCGCAAACGGCGGTGCTGGCCAGCGGGGCAGGCGTCGGCAGTGCTGTGGTGCAGAAGACCATCGCTTCCGAGCCCGTGGCCTCGCGTCAGGGTGGCTATCGCAGTGCCGCCATGCACGCGCAGTACTGCACACAAAGCGAATCGGCCCAGTACGGCGGTACTGATCTGTGCCCGCAGGTCTCCAGCTTGCCTGGGGGCGACATCGAAATGCGCTCGTTGATCGACGGGGCGGGAGCCGTGGGCAAGGCCCCCGACTTGACGTTCAATCAGGATCAAGTCGATGCGGGCATGGCGTACATGAAGAACTCGGCACGCCATGACGGGGGGCGGGCACCGGGCAAGGGGGATATCCAGTCGGCCACGGGACGTGAGTATCAGGGGCTGATGACCCAGTACAAGGCGATTCAGAGCGCCGCGACTCAACCGCAGCTAGACATTATCGCCGCCAGTCAGGCCAATCCGGCCACACAGGAGGCATTGCAAGAGGCGCTACAGAATCCATCAGCGGCGGAGTATTTCGCTTCAACGGGAAGCCAGCAAGCACAACGCACCGGGGTGATGAGCGAGCGCGAGTTCGAGGCTTTCGAGGTGGGCAGGCGCTATGCCAATACCGCCTATGAAACCGACCTTCAGGCCCTGAGCGGAGACAACCTGATGCGTGAATTGGTGCGCGTGCAGAGCCTGGGCAACTGGCTGCAGTTGGGACTCAAAAACGACCAACGTCAGGCCAACATCATTGCCGGCCAGCAACTGGCCCTGGCGGCAGACGCCAAATACGTTCCGCAGCTTCAGGAACTGGGAGCAAAAATGAGTTCGGGAGTCACCGCACATGAAAACTGA,MKKRYALTAIAVGVLQTQQVLAYVQPVAVTASVPITAQVMPAMAGLQATLAEILTTETQIGTAIVQASDKQVAVISEAARAQREADIFGRQTERLERAREQYSVPDSICSESASGVAATVGKVSRAQTAVLASGAGVGSAVVQKTIASEPVASRQGGYRSAAMHAQYCTQSESAQYGGTDLCPQVSSLPGGDIEMRSLIDGAGAVGKAPDLTFNQDQVDAGMAYMKNSARHDGGRAPGKGDIQSATGREYQGLMTQYKAIQSAATQPQLDIIAASQANPATQEALQEALQNPSAAEYFASTGSQQAQRTGVMSEREFEAFEVGRRYANTAYETDLQALSGDNLMRELVRVQSLGNWLQLGLKNDQRQANIIAGQQLALAADAKYVPQLQELGAKMSSGVTAHEN,similar to GP:4903126 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0063,NP_808721,29171537,Protein,63150,63752,traX-2,,traX protein,,,ATGAAAACTGAACCTGACACAACAAAGCACGAGGACGAACAATCGCCGCCGGACGACAAGCATTCGGGCACACCGTTACGGCGCGCCGGCCATGTGGGGCTGTCGATCCTCAACCCGTTCTCTGACCTGGCGGTGATCTATCGCCGGGGCATAAAACCGACGGCGCAAAAGCTGAAGCTACTGAAGACGTTGCTGACCCCGGCGTCAGCAACGACTGAGGCAGATGCAGCCGGTGTCAGTTGGAGTGTGGCTGTCGCTCGTTCGGGAAGGACTATCGAACAGCTACTGACCTCCTACAACCGCATCAGGATGGCATGGTGGTGTTTGATGATGGTCAGCACCAGCCTGAGTGTTCTGCTGCTGGCCATGCTGCTGTTGGCCAACTTCAGCCTGCCATTGAGCACCTTTCTTCGGGCGACGGTAACGCTCCTGGTCCTGGGATCAATCGCCAGTTTGGGCTTCGTCAAAACGCTGATCGCGACCTACCGACTGTGGCAACTGCAGAAAAGGCGCGTCAGCGTAGCGGAACGAGGGACCTTCAAAGACTTTCTGGCCGAGACCCGGTGGTGCCGGCTGGTGCTTACTCGCGGCCACCTCAAGTAA,MKTEPDTTKHEDEQSPPDDKHSGTPLRRAGHVGLSILNPFSDLAVIYRRGIKPTAQKLKLLKTLLTPASATTEADAAGVSWSVAVARSGRTIEQLLTSYNRIRMAWWCLMMVSTSLSVLLLAMLLLANFSLPLSTFLRATVTLLVLGSIASLGFVKTLIATYRLWQLQKRRVSVAERGTFKDFLAETRWCRLVLTRGHLK,"similar to GP:4512493,  and GP:4903127 ;",,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0064,NP_808722,29171538,Protein,63781,65925,traY-2,,traY protein,,,ATGAACCTCATTAAACGCTTCTGGTGGATGGGTCTTCTGCTGGTCTTCTCCGTGCCGGTACTGGCCGATAACGTGGATTACCAGACGATCGCGGCAGCCTCCCAAAAGCCCAATGACCTCTCGCGCCAGGCGATGGTCATGATCATGGGCCAAGTAGCAGTCGATCCATTTGCACCATCACAGCCAACCTTGATTGGCTCACTGTTCGCCATTATCAATGGCGTTCTGGCCGTGATGGCCCTGTTCTGGTTTCTGACCATCACCCTGAAAACCATTGTGAAGGCTGGGCATCAGGGACAGTTTTTCGCAGGCGGTCGATCTGCGTTGTACCCGATCATGACGTTTGCCGGTTTCATCATGATCTTGCCCACCCAATCAGGTTGGTCACTGGCCCAGCTCGTCATGGTATGGGCCTGCTCCACCATGGGGGTTGGCAGTGCCAATCTGCTGACTGATAAAGCTGTGGACATGATGGACAGCGGCTACTCGATGGTGACGCAACCCACGGCTCCTTCAACCCGAAGCGCGGCACGGGGCATCTTTGAAATGAACTTGTGCAAGTACGCGATCAACCGTGAGCTGGAGTCGCTGTATGCGGATGGTGTGGCCAATACCCCGTTGATTACCACCAAGGGGGGCAACGGCCAATACGACACTGGCAACGGCAGCGCGGTGTGTGGTTCTGCCAAAACACCCAATACGGGCCGCACCGGAACCTGGAACCTGCTGTTTGACAGTGACGTGGACACGAGTGGGGTGATCACGGCGCAGCACCAAGCGCTAGACACCATGCAAAGCACCCTGGATCAAGCGGCACAGGCGTTCGTAGACACCTACCTGAGCAAGCGCGACCAGGATACGGGGAGCTTCCAGGACGCCGAGACGCAGATCCAGAACGCAGCCGCCGCCTATGAAAACACGGTGAACCTGGCCCTCAACAAGATAGATTTCAAGGACACACTGCAAAGCCAGTTGTCGAGCCAGATCAAAAGCAGTGGTTGGGTGGCCCTGGGCAGTTGGTATCACACCTTCGCCACAGCTAATAACAAGACCAACGACGTGGCCAGCTCGACCCCGGTTGTCACGGGGATGAGTAATCTGGGCGAGCACGGCACCGGCGACTTGTATAACCAGGTGTTCGCAGCCTACAAATCGCAGGTGCAGAACAGTACCTACACCGCGCCGCTGGGGACGCAGACGACCAAGGATGACGGGGCGGCAGCGACGGCGAATGACCCGAATGCAGTGTTTGTTGGCATTTTTAAGTCGCCTATGCAGAAGTTAACCTCGTTATTTGCAACTGGGAAAATTGGTACTGATGCCAGCTTTTCCAACCAGGTGAACCCGCTTATCAAAATGCAAACCATTGGTGACTACACGCTGGGAACTGTTGAAACCCTGATGGTGGCCTATGCCGGGACGTGGGCAGCTGCCTCATCGGCCAGTAATTCGCCGTTGGGCTGGGGTGCCAAGATATTTTCGGTGGATGTCGGGGCGGTGGTGAAAGATGTGCTGGGTGCGCTGGCCCCGATGTTCTATTTCGTCATGTTCGCCCTGCTGGCCATCGGTTTTTCGCTGGCCGTATTTCTGCCTGCTGTGCCCTTTCTGTTCTGGATGGTGGGCATATTCAACTGGGTCGTCAGTGTGCTGGTGGGCTGTGCGGCGGGCTCAATGTGGGCTGCCACGCACCTGGGGGCCGAAGAGGACAAGGGGAGTCGCAGTACCTACGGTTATATCTTTCTGATCGACATGATGCTGCGGCCTTCGTTGATGGTACTGGGGTTCTTTTTTGCGTCGGTGGCCGTAATCGGTGGGGGAACGATCCTGAATCTGTTATTCGCCTCGGCGCTGGCCAATGCCAACGCGGACTCGATCGTGGGATTGTTCAAGATGATCGGATGGCTGATGATCTATGCCCGCATTGCGACCTTTGGTGTGACTCGACTCTTTGGCCTGCAGGCGTCCTTGGCGGACTACGTGATCTCGTTCCTGGGCGGTCGAGAAGGCGCCAACCTGATGGGCGGCATGGTCGATAACATGAAAGGCATGTTTGGTGCTGCTGGCTCTGGGGCACAACGTACCCCTGGCGTTAAAATGCAACCTAGGAAGCCTGGCGCAGGGGGCAATGGGGATGGAATCCAGTAG,MNLIKRFWWMGLLLVFSVPVLADNVDYQTIAAASQKPNDLSRQAMVMIMGQVAVDPFAPSQPTLIGSLFAIINGVLAVMALFWFLTITLKTIVKAGHQGQFFAGGRSALYPIMTFAGFIMILPTQSGWSLAQLVMVWACSTMGVGSANLLTDKAVDMMDSGYSMVTQPTAPSTRSAARGIFEMNLCKYAINRELESLYADGVANTPLITTKGGNGQYDTGNGSAVCGSAKTPNTGRTGTWNLLFDSDVDTSGVITAQHQALDTMQSTLDQAAQAFVDTYLSKRDQDTGSFQDAETQIQNAAAAYENTVNLALNKIDFKDTLQSQLSSQIKSSGWVALGSWYHTFATANNKTNDVASSTPVVTGMSNLGEHGTGDLYNQVFAAYKSQVQNSTYTAPLGTQTTKDDGAAATANDPNAVFVGIFKSPMQKLTSLFATGKIGTDASFSNQVNPLIKMQTIGDYTLGTVETLMVAYAGTWAAASSASNSPLGWGAKIFSVDVGAVVKDVLGALAPMFYFVMFALLAIGFSLAVFLPAVPFLFWMVGIFNWVVSVLVGCAAGSMWAATHLGAEEDKGSRSTYGYIFLIDMMLRPSLMVLGFFFASVAVIGGGTILNLLFASALANANADSIVGLFKMIGWLMIYARIATFGVTRLFGLQASLADYVISFLGGREGANLMGGMVDNMKGMFGAAGSGAQRTPGVKMQPRKPGAGGNGDGIQ,similar to GP:4903128 ;,,,,,,,,Cytoplasmic Membrane,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0065,NP_808723,29171539,Protein,66269,66919,,,"exclusion-determining protein, putative",,,ATGAAAGTACAGCGCCTGAAAACAGCGAAAGAAGGATGGTTTTGGATCGTCAAAATCTTCTACATGCTTTTTGCTTTTCCATTTGCAGTGCTAGTTGGAGTCCCTTCACTTTTCATCGCTTCCTCGCTGATAGAGGAGAAAGACTTCACTACCCTCGGTTTTTGCTCGATGCTTTGGCTTGGCGTACTGATTCCCATGGGAATATTCATCTATGGCGTACTGAGTCGCCGTCGTTTGCTCAAGCGAGTCACACGGGTCATAAAATCGCCGCAGTTCTTCAACCCAGACCCTACCAATGAGATTTATCACGAGGGTGACGGCAAGTACCTGGGCATCGACACGAAGAACGGTACCATTCTGTACGTGCACCGCATTCGTAAGGAGCAGGTAGATGTGGTGGCCCTGACCATGGACGACTGGACCAACCGCGAGGTCGAAGGCAAGGGCATATTACGCCTCTATACCAAACACCCGGATCTTCCACGGATCGAAATCGGAACACCCTTGGCGCAGCTTTGGTATGACACCCTGGGGGCTATGGAGCACAAGCAGAAGCAGTACAGCACCCCACAACCGTTCAACCGCTATGTGCATGACCACCTCGAAGCGCTTGAACGTGATCTGAACGTGCAGATCCCACGCCTGGCGTGA,MKVQRLKTAKEGWFWIVKIFYMLFAFPFAVLVGVPSLFIASSLIEEKDFTTLGFCSMLWLGVLIPMGIFIYGVLSRRRLLKRVTRVIKSPQFFNPDPTNEIYHEGDGKYLGIDTKNGTILYVHRIRKEQVDVVALTMDDWTNREVEGKGILRLYTKHPDLPRIEIGTPLAQLWYDTLGAMEHKQKQYSTPQPFNRYVHDHLEALERDLNVQIPRLA,similar to SP:P05839 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0066,NP_808724,29171540,Protein,67012,68211,trbA,,trbA protein,,,ATGCAAAATCGACAATCCCAAGGTGCATGGGAGGGCGAGCAAGCGCAGATGTTATTGGCGCTTTGTGCAGCCGTCCTGTTGTGCTGGATGTTCTTCGATATCTTCGTGTACTGGACCACCTGGACGCTTTATTGGTTATGGAAAATGGTGGATTTTCCCTTCATCCATGTCTGGGCCGGTGGCAAGATCAACCTGCTGGCCGACGTGGCCAACCACGCCAAGGCCGTGACGCTGGATGAGTGGCTTGAGGTGATGAACGCTACCAGTGGGATTCTGCTGCTGTTCCTGATACCGCTGGTGATTGTGAGCAGTTGGGGGCTGGCGCAGCATCCGGTACTGCCGTTTCGCAGCAAACGCCTGGTGAACATTCACACGCTGCCTGGCCTGGTGAGTCGTTTCGCACCCTCGGTCATCCCGGTGTTGGCCGCGTCCGGTCCCGATGGCCTGATGAACGATACCTCCCCCAGTAATGCCTGGGCGCTCAAGCCCGAGGAGTTTGCCGAACGTTACAACCTGGTGCAGCGCAAAGTGCTGGATCGAGAGGCTGCTCGTGCGGTGTTCGAGGAGCAAGTCGGAGATGTCCATAATGGACTTCTGGACTTGACGCCCTATGAACGGGCCTTGCTGGCCGTATTCGGTCTGCAGGTATTCCTCAATGACCGCAAGGCAGCGACCCGGTTGCTCGATGACCTGAACCGTTCCTGCATGATCAAGGGGTTGTTGCGGCGCAAGACCTTCTCGTTGACGCCGCTGTACGGCTTGGCCGACGCGGGGTTTGATCGCGTTGCAAAAGCACCGGGCGTCAGTGAGTGGCTACAAAGCCATAGATCGATGCGCACCGCGCTGGTGGCACTGTATGGCCGCGATCTGCGCTTGGCGCCGGCGCGCTTTCGCTGGCTCAAGGGGGTTAACCGTACTTTGTGGTATGCCTTGCACAGTGCCGACACGGCCAAGGTGTTTGTGGAAGGCGCCGGTGTTCAGGCTCAGGCGCGGGCAGAAGTCCATGCCAGAAAGCTGGGGCTGCCACGTCCTGGGTTGATGGTGACCCAGGCCATCGATGGCTTGCAGGCCGAGTTGGAAAGCATCGGTCTGGTATTTGCGCGACATGTCATCACGCCTAAACGCCGGGAGGCCTCTGACCTTCCTGTCATGACGGCGGTGTATGCCGTGCAGCCTACTGAGTTAACTGAGCCAGCCTGA,MQNRQSQGAWEGEQAQMLLALCAAVLLCWMFFDIFVYWTTWTLYWLWKMVDFPFIHVWAGGKINLLADVANHAKAVTLDEWLEVMNATSGILLLFLIPLVIVSSWGLAQHPVLPFRSKRLVNIHTLPGLVSRFAPSVIPVLAASGPDGLMNDTSPSNAWALKPEEFAERYNLVQRKVLDREAARAVFEEQVGDVHNGLLDLTPYERALLAVFGLQVFLNDRKAATRLLDDLNRSCMIKGLLRRKTFSLTPLYGLADAGFDRVAKAPGVSEWLQSHRSMRTALVALYGRDLRLAPARFRWLKGVNRTLWYALHSADTAKVFVEGAGVQAQARAEVHARKLGLPRPGLMVTQAIDGLQAELESIGLVFARHVITPKRREASDLPVMTAVYAVQPTELTEPA,similar to GP:4512494 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0067,NP_808725,29171541,Protein,68297,69382,trbB,,trbB protein,,,ATGGCCTCGGCATCTTTGCGCGCCCCGTTTTCGGTGGACATCCAAGGCGATCAGCTTGTTGTTTATCAGGCAGATCAGGAAGAAGGCATCGTGACACGCACGATTTGCACCCTGGACCTTCGCCATCAGCACTCGTTTTATCTGAGCAATGACGGTGTGGTCTGCCGCGATGTTCAGGGTTTTGAATTCTCTCTTGAAACCCATGACAGTGACGAAACCCATGAGCTACTGACCGCACTGTCGCGGGCTTTGCTGCGTCATGGACGACGCAAGACCCAGCGGCGTCTGATGGGCGTGTTCGTGCTGTTGGTTGTGCTTTGCCTCGGTGCCCCATGGCTTGGCCGAGCGCTTGAATTGCCTGTTGTAATGCCGGCGGCGCAGGTCATCACGCCCTCAGTCACGCCCCCCCCCAAGCCGGACCTGGCCAAGCGCAGCGCGCCGGCGCCGATCGCGTCTGAGCCACGCCAGTCCGCTGCAGACGTGGCACCTGACGATGGCTGGATATTGCCCTGGGAAGTTCGGGCCACACTCCCTCAAAAGCTGCACAACGCTGCGGAGCGCAAGCTGTTCACCGTTGACTATTCCAGCGGTCACGCGCGCACGCTGTATGTCTTTTCGGACCCTGGCTGTCCGAACTGCCAGCGTCTGGAGTCGTCCCTCAACACGCTCTCCGATGCCTTCAACGTGGTGGTGTTTCCTGTGCCGGTGATTGGTAAGGAAAAGTCGATTGCCGCTATTACGCCGGTGCTGTGCCTGCCGCCTGAGCAACGCAAAGCCGCGTGGGATCGCCTGTTTGATGCAGCCCCCGAGGGTGTGAACTTTGGGAAACCCCCGTTAAAGCCGGCGTCGGAAGGGGTGGAGTTGAAAGCGGCGCAACCAGCAGGCACGTGCGATGTTGCAGAAAAGGCCTTGGGGATCAACCAGACGGCCTATCAGGCGTATCGCATACCGGGCACGCCCTGGGTGATCAGCGACGATGGGCGCTATGTGCCGCAGGCGTTGTTGCGTGATCCGATCAGGCTCAAAGCCTTCCTAGATGAGCGACCTGCCCGCCAGGTTCAGGAGGTGTCGAATGCGCCCCAATGA,MASASLRAPFSVDIQGDQLVVYQADQEEGIVTRTICTLDLRHQHSFYLSNDGVVCRDVQGFEFSLETHDSDETHELLTALSRALLRHGRRKTQRRLMGVFVLLVVLCLGAPWLGRALELPVVMPAAQVITPSVTPPPKPDLAKRSAPAPIASEPRQSAADVAPDDGWILPWEVRATLPQKLHNAAERKLFTVDYSSGHARTLYVFSDPGCPNCQRLESSLNTLSDAFNVVVFPVPVIGKEKSIAAITPVLCLPPEQRKAAWDRLFDAAPEGVNFGKPPLKPASEGVELKAAQPAGTCDVAEKALGINQTAYQAYRIPGTPWVISDDGRYVPQALLRDPIRLKAFLDERPARQVQEVSNAPQ,Annotation based in part on location in a cluster of genes. ;,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0068,NP_808726,29171542,Protein,69369,71657,,,"conjugal transfer protein, TraG/TraD family",,,ATGCGCCCCAATGACTACGCCGTCGAGCGCACGCGCCTAAATCGGCGGGTTTACCACTCGGCACTGGCTGAGTGGTTGATGGGCCCCGGTAGTCTGACGCTGGGCCTTGCCGGGTCTGTGGTGGGAGGCGTCCTGTACCCGGTCAGCCTGTGGCTCAGTCTGCCGGCCTTGCTGGTTTGGTCACCTGTCATGCTGCTCGAACCCTGGCAGATGCCCATGCGCATGCCTTCAGACATGGACTGCCTCGACCCTTCGACGCAACGCCAGGTGACGGGCAAGCTGCTGGGTTTCTTGCCGGTCACGGCCATGCGCACGGTGATGCTCAAGGCAGCGGGCATCCTGTATATGGGGTACCTGCGCGGTCGGGACGCCGGGCGTGAACTGTGGCTGTCGCTGGATGACATGACCCGCCATATTCTGATGTTCGGTACAACCGGTGCCGGCAAAACCGAAGCACTGCTGGGGTACGTGTTGGGCCAGCTGGGCTATGGAAAGGGCCTGATTTATTCGGACGGCAAGGCCCAAAATGATGTGGCCGCCGCGATCGTGTCGCTGGCCCGACGCTTTGGCCGTGAAGACGACGTTCGGATGATGAACTTCATTACCGGGGGCCGCTCCAGGGCACAGGAACTGCTGGAGGACAACAAAAGCAGAGGGCAGACCAATACCGTCAACGCGTTCGGTATTGCTCAGGAAACCTACATCATCAACCTGATGGATTCGATGTTGCCTCCTGCGGGCAACGATGCCGGCTGGCAAGAGAAAGCCCGGGCCATGATTCAGGCTTTGGTGTTCTCCCTGGTGTACAAGTGCCGGCGTGAAGGCACGGTCATGTCCCAGCGCACGATCCAGGCACATTTGCCGTTGCGGGCCATTGCCAAGCTCTACATCCAGTCGGTGGAACAGCAATGGCATGAAGACGCCCAGTTACCCCTGAAAAACTACCTGGGCACATTGTCCGGTTTTGACCTGGCCAAGGTGGATTCGCCGGAGGAATGGGCGACCACTGCGTTGGATCAGCATGGTTTTCTGATCCAGCAATTCACCCGCATGCTGGCCTTGTTCAATGACACCTACGGCCATGTGTTTGCTCGTGACGCCGGCGACATAGACCTCAAGGACGTGGTGCATAACGATCGCATCCTGGTGGTCCTGATTCCTGCGCTGGAAATCTCCTCGACCGAGGCCGCGACTCTTGGGCGTCTGTACGTGTCGCAGCTGGCCATGATCCTGAGCCAGGATCTGGGGGAGAAACTGGAGGGCAAACCCGAAGACATCCTGGTGATCCGCAAGTACAAGGACCGCTTTCCGTTCTTGTGGATCTGCGACGAGGTCGGGGCCTACTACACCGAAAAGCTCGGTGAGCTGGCCACGCAGGTACGCTCCCTGGGGTTTTGCCTGCTCCTGGCCAGCCAAGAGGCGCAGCGCCTCAAGTCGGCGGCCGGCGACAAGGTGTGGACGCTGATCGGGAACATGGGGGTCCGAATCACCGGCAAGATCATGGACCCCAAGGACACTCTCGAAATACTGCAGTTGATGGCCGGTACCGAGTACCTGCCAGTGATGAGCGGTATGGTGCGTCAGGCCGGAATCATGGGGGCCAGCTGGGAGGAAGCAGACACACTGAGCCTGAAAGATGAGAAGAAAGTCAGCGTCGAGGAAGTGCAGCAGCTCAAGGAGGGGGAAAACATCACGCTGTTCAACGGACAAGTGATTCGCGGCAGCTCCTTGTACATTCACGATGCTGACAAGCTGTCCAAGGAAGCGATCCGGATCAACCGCTTCATCGAGGTGGCCCCGCCAGCGCTGGACACCTTGTTGGCCGGTGCGCCTGCTCACATTCGGCGCAGCTATTCGCGCGCGGACCGCGTGCAGCAGATTCTGTACCACCTGGCGATGAAGCCTGGTCGTTCAGACCTTGAAAACCTGGTGCTGACAGATCCGACGTTGGTCGTCTTGAACGAGCTGGGAGAAGAGTGGCGGCTGATCTGGCGTCGCCGTCCTGGAGCGGCAGTGCGCAGCACCTTGTTATGGCACACAGCGCTGGAGCATGTGCCCAAGCGCGGAAGCGGCTACGTGGCGCAATCGTCCACGGCGCTGGACCTGACCGTCGGCAGCAAGCGGTTGCAGACCTATCAGGCGCAGCACATCGATCCGGCCAGAGTACCGAAAGTGAAGGGCAAGGCGCCTGCACCTAGAGCCACAACGCCTGTTCCACCAAGCCACGACCAGTCACCGCCCTATTTCGACGACGGATCGTATTCGCCGGCGCCGTTCGACTGGGATTAA,MRPNDYAVERTRLNRRVYHSALAEWLMGPGSLTLGLAGSVVGGVLYPVSLWLSLPALLVWSPVMLLEPWQMPMRMPSDMDCLDPSTQRQVTGKLLGFLPVTAMRTVMLKAAGILYMGYLRGRDAGRELWLSLDDMTRHILMFGTTGAGKTEALLGYVLGQLGYGKGLIYSDGKAQNDVAAAIVSLARRFGREDDVRMMNFITGGRSRAQELLEDNKSRGQTNTVNAFGIAQETYIINLMDSMLPPAGNDAGWQEKARAMIQALVFSLVYKCRREGTVMSQRTIQAHLPLRAIAKLYIQSVEQQWHEDAQLPLKNYLGTLSGFDLAKVDSPEEWATTALDQHGFLIQQFTRMLALFNDTYGHVFARDAGDIDLKDVVHNDRILVVLIPALEISSTEAATLGRLYVSQLAMILSQDLGEKLEGKPEDILVIRKYKDRFPFLWICDEVGAYYTEKLGELATQVRSLGFCLLLASQEAQRLKSAAGDKVWTLIGNMGVRITGKIMDPKDTLEILQLMAGTEYLPVMSGMVRQAGIMGASWEEADTLSLKDEKKVSVEEVQQLKEGENITLFNGQVIRGSSLYIHDADKLSKEAIRINRFIEVAPPALDTLLAGAPAHIRRSYSRADRVQQILYHLAMKPGRSDLENLVLTDPTLVVLNELGEEWRLIWRRRPGAAVRSTLLWHTALEHVPKRGSGYVAQSSTALDLTVGSKRLQTYQAQHIDPARVPKVKGKAPAPRATTPVPPSHDQSPPYFDDGSYSPAPFDWD,identified by match to PFAM protein family HMM PF02534 ;,,,,,,,,Cytoplasmic Membrane,Class 3,,,,,,,,,,PF02534,"TraG, TraG/TraD family. These proteins contain a P-loop and walker-B site for nucleotide binding. TraG is essential for DNA transfer in bacterial conjugation. These proteins are thought to mediate interactions between the DNA-processing (Dtr) and the mating pair formation (Mpf) systems..",,,
NC_004633,Plasmid_pDC3000A,PSPTOA0069,NP_808727,29171543,Protein,71685,72107,,,hypothetical protein,,,ATGAGTTACAGACCTCAAAGTGATCCCTGGTTTTCAAGGAAGGTTTTGAAGTTTCACATCGCGAAAAACACGTTTGCGGTATTTAGCCAATATGGAGGGCTTGGCTTGTACGGCCTTCCACCCACTGGGTCCGTTACCCGAGATATAGGTGTCGATGATTGCCGGGCTCTACTGCAGAACATGAGGCACTGGCTGGGGTCTCCAACGGCCCACGCAGAAGCCATCCAATGCAGTACCGATATCGACTACGTGCGTTATCAGGTTGATTGGGTCCAGTCGTGTCTGGGCAAGGAATCCAACCAGAAATACCTGGGTGTGATGTTCATTCTTGACGGGTGGGACGACCGTCAAACGGATGAAGACAACAGACGAGCGGATGCCTATTGCCACCGTCTGTATTCGTCATCGCCTTACGACGATTAA,MSYRPQSDPWFSRKVLKFHIAKNTFAVFSQYGGLGLYGLPPTGSVTRDIGVDDCRALLQNMRHWLGSPTAHAEAIQCSTDIDYVRYQVDWVQSCLGKESNQKYLGVMFILDGWDDRQTDEDNRRADAYCHRLYSSSPYDD,identified by Glimmer2 ;,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0070,NP_808728,29171544,Protein,72068,72691,,,hypothetical protein,,,TTGCCACCGTCTGTATTCGTCATCGCCTTACGACGATTAACTTTGCTGATCGGAGCCCCCATGAAAGAGACTCTTTGGCGAGCTTTTGCGGTGATCGTGTCGCGTCCATGCGTCGCCGCCTGGATCATTCGACGCGCCCAGCGTACGCCTTACCAACACATCACCTCGGCCGATGGTCAGGAACGCTACATGGGCCGCTGGTGGCTGTTCGATGGCTATGATCGCGCCAGGCAGCAACCCAAACACCGCTGGTTTCCCTGGTCGGTCCGGGTCCACCACATCTTGTGCGAGGATCGTGATCGCGACCTGCACGACCACCCGTGGCACGCCCGTACGATCATCCTGCAGGGTGGGTACGTCGAGCTGCGTCTGATCATGATCAATACCCATGGACAGGTCACTGAGCGTATCGAGCGCAGAACAGGCACCTGCGCAGCGCTGCGTCCTGGTGAGTATCACCGTATCGACCAGGTGGCAGCTGGCGGTGCTTACACCCTGTTCATCACCTGCCCTAAATCCTGTGACTGGGGCTTTCTGGTCAACGGGGTGAAAGTCCCTTGGGATGTTTACACCGCAGATGACAGCGCTTCGTTTGAGTCCAGCAGGGTCGCCGGCGACAAGTAG,MPPSVFVIALRRLTLLIGAPMKETLWRAFAVIVSRPCVAAWIIRRAQRTPYQHITSADGQERYMGRWWLFDGYDRARQQPKHRWFPWSVRVHHILCEDRDRDLHDHPWHARTIILQGGYVELRLIMINTHGQVTERIERRTGTCAALRPGEYHRIDQVAAGGAYTLFITCPKSCDWGFLVNGVKVPWDVYTADDSASFESSRVAGDK,identified by Glimmer2 ;,,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,,,,,
NC_004633,Plasmid_pDC3000A,PSPTOA0071,NP_808729,29171545,Protein,72879,73307,,,"transcriptional regulator, GntR family",,,ATGATTAACCACAGAACGCAAAAAATGCACGCTCAGCAGGTGCTTGAACACCTGGCCTACGGCTTGGCACAGCCAATAGCGCTGCCCCGCGAGACCATTGAAGAAGTGCTTCGCGAAGCCATCATGGATGGACGACTTGAACCGGGTGAACGGCTTACGCAGCAAGCCATTGCCAATGCCTTCCAGGTCAGCCGGATGCCGGTGCGCGAAGCCCTGCGGTCATTGGAGACGCAGGGTTACATCGCGACGGAGTATCACAAAAGTTATCGGGTCACGAACGGCCATGACCTGCCCCAGTGCGGCCACCTGCCTGGCTTGCTGAGGTGCGTTGCAGAACGCCATACGCAGCTGGGCGACCTCGAATCAAAAGTGGCCTTTGAAAATGAAATCCTGCACGTCCTGGGCCGGCTGCGCCCTACCCCTTGCTGA,MINHRTQKMHAQQVLEHLAYGLAQPIALPRETIEEVLREAIMDGRLEPGERLTQQAIANAFQVSRMPVREALRSLETQGYIATEYHKSYRVTNGHDLPQCGHLPGLLRCVAERHTQLGDLESKVAFENEILHVLGRLRPTPC,identified by match to PFAM protein family HMM PF00392 ;,,,,,,,,Cytoplasmic,Class 3,,,,,,,,,,PF00392,"GntR, Bacterial regulatory proteins, gntR family. This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerisation domain. The GntR-like proteins can be divided into six sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships..",COG1802,"GntR, Transcriptional regulators [Transcription].",Transcription
NC_004578,Chromosome,PSPTO_0001,NP_789863,28867244,Protein,339,1874,dnaA,,chromosomal replication initiation protein,,NA,GTGTCAGTGGAACTTTGGCAGCAGTGCGTGGAGCTTTTGCGCGACGAGCTGCCGGCCCAGCAATTCAACACTTGGATCCGTCCGCTACAGGTCGAAGCCGAAGGCGACGAGTTGCGTGTGTACGCACCCAACCGCTTTGTTCTCGATTGGGTCAATGAAAAATACCTCGGCCGTTTGCTTGAGCTTCTCGGCGAACGTGGTCAAGGCATGGCGCCCGCTCTTTCCTTATTAATAGGAAGCAAGCGCAGCTCAGCGCCGCGTGCCGCACCGAATGCGCCATTGGCTGCTGCAGCGTCCCAGGCGTTGTCTGGCAATTCGGTCAGCAGCGTTTCAGCGTCTGCACCGGCCATGGCCGTTCCTGCACCGATGGTTGCAGCGCCTGTGCCTGTGCATAACGTCGCCACTCACGACGAGCCGTCACGCGACAGCTTCGATCCGATGGCAGGCGCCAGCTCGCAGCAGGCGCCGGCCCGTGCCGAGCAACGTACGGTGCAGGTCGAAGGTGCGCTCAAGCACACCAGTTACCTGAACCGCACATTCACCTTCGAGAATTTCGTCGAGGGTAAATCCAACCAGCTGGCACGCGCTGCCGCCTGGCAGGTTGCCGACAACCCCAAGCACGGCTACAACCCGCTGTTCCTTTATGGTGGCGTGGGCCTTGGTAAAACTCACTTGATGCACGCTGTGGGTAATCATCTGCTGAAGAAGAACCCGAACGCCAAGGTTGTCTACCTGCATTCGGAGCGCTTTGTAGCGGACATGGTCAAGGCCTTGCAGCTCAACGCAATCAACGAGTTCAAGCGGTTCTACCGCTCGGTTGATGCGTTGCTGATCGATGACATTCAGTTTTTCGCTCGCAAGGAACGTTCACAGGAAGAGTTTTTCCACACGTTCAACGCGCTGCTGGAAGGTGGACAGCAGGTCATTCTGACCAGCGACCGCTATCCAAAGGAAATCGAAGGCCTGGAAGAGCGACTCAAGTCCCGCTTCGGCTGGGGGCTGACCGTCGCGGTCGAGCCACCGGAGCTTGAGACACGCGTAGCGATCCTCATGAAGAAAGCAGATCAGGCCAAGGTCGATCTGCCTCACGATGCGGCGTTTTTCATCGCCCAGCGTATCCGTTCCAACGTCCGTGAACTCGAGGGCGCGCTCAAGCGTGTCATTGCCCACTCGCACTTCATGGGTCGCGATATCACCATCGAGCTGATTCGCGAGTCGCTGAAAGATTTGCTGGCGTTGCAAGACAAGCTGGTGAGTGTGGATAACATTCAGCGAACCGTGGCCGAGTACTACAAGATCAAGATCTCCGACCTGCTGTCCAAGCGTCGTTCCCGTTCCGTAGCCCGACCGCGTCAAGTGGCCATGGCACTTTCCAAGGAACTCACCAACCACAGCCTGCCGGAAATCGGCGATGTGTTTGGTGGCCGGGACCATACGACTGTTCTGCACGCGTGCCGGAAGATCAACGAACTCAAGGAATCCGACGCGGATATCCGTGAGGACTACAAGAACCTGCTGCGCACTCTGACTACGTGA,MSVELWQQCVELLRDELPAQQFNTWIRPLQVEAEGDELRVYAPNRFVLDWVNEKYLGRLLELLGERGQGMAPALSLLIGSKRSSAPRAAPNAPLAAAASQALSGNSVSSVSASAPAMAVPAPMVAAPVPVHNVATHDEPSRDSFDPMAGASSQQAPARAEQRTVQVEGALKHTSYLNRTFTFENFVEGKSNQLARAAAWQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHTFNALLEGGQQVILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVDLPHDAAFFIAQRIRSNVRELEGALKRVIAHSHFMGRDITIELIRESLKDLLALQDKLVSVDNIQRTVAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDVFGGRDHTTVLHACRKINELKESDADIREDYKNLLRTLTT,,,,,,,,,Cytoplasmic,Class 3,,TIGR00362,DnaA,chromosomal replication initiator protein DnaA,equivalog,4.10E-171,,DNA metabolism,"DNA replication, recombination, and repair",PF00308PF08299,"Bac_DnaA, Bacterial dnaA protein..Bac_DnaA_C, Bacterial dnaA protein helix-turn-helix domain..",COG0593,"DnaA, ATPase involved in DNA replication initiation [DNA replication, recombination, and repair].","DNA replication, recombination, and repair"
NC_004578,Chromosome,PSPTO_0002,NP_789864,28867245,Protein,1913,3016,dnaN,,DNA polymerase III subunit beta,,NA,ATGCATTTCACCATTCAACGCGAAGCCCTGTTGAAACCCCTGCAATTGGTCGCCGGCGTGGTAGAACGCCGCCAGACCTTGCCGGTTCTTTCCAATGTGCTTCTGGTCGTGCAAGGCCAGCAGCTGTCGCTGACCGGTACTGACCTGGAAGTCGAGCTGGTTGGCCGTGTTCAGCTGGAAGAGCCTGCCGAACCTGGGGAAATCACCGTTCCCGCGCGCAAGCTTATGGACATTTGCAAAAGCCTGCCCAATGATGCGCTGATCGACATCAAGCTTGATGACTCGAAACTGATCGTGAAGGCAGGTCGCAGCCGGTTCACGTTGTCCACGCTGCCTGCCAACGATTTCCCGACGGTGGAAGAAGGCCCCGGCTCGCTGACGTTCAATCTGGTGCAAAGCAAACTGCGTCGCCTGATCGAGCGCACCAGCTTTGCGATGGCTCAGCAGGATGTTCGCTATTACCTTAACGGCATGCTGCTTGAAGTCAGTGCCGGAATCTTGCGTGCAGTGGCTACCGATGGCCACCGTCTGGCAATGTGCTCGATGTCAGCCGATATCGAACACGCCGACCGTCATCAGGTCATCGTGCCTCGTAAAGGTATTCTGGAGATGGCGCGTTTGCTGACCGAGCAGGACGGCATGGTCAGCATCGTGCTGGGTCAGCATCACATCCGCGCCACCACCGGTGAATTTACCTTTACCTCGAAACTGGTCGATGGCAAGTTCCCGGATTACGAGCGTGTGTTGCCCAAGGGTGGCGACAAGCTGGTACTGGGCGATCGTCAGTCCCTGCGTGAAGCGTTCAGCCGCACCGCGATTCTGTCCAACGAGAAGTACCGTGGCATTCGTCTGCAACTGGCTAACGGCCAACTGAAAATTCAGGCCAACAATCCTGAGCAGGAAGAGGCAGAAGAAGAAATCGGCGTCGAGTACAACGGTGAGGCGTTGGAGATCGGTTTCAACGTGAGCTACTTGCTCGACGTGCTGAGCGTCATGACCACCGAACAGGTTCGCCTGATTCTCTCTGACTCCAACAGCAGCGCTCTGGTGCAAGAGTCGGATAACGACGATTCCGCCTACGTTGTCATGCCGATGCGTCTGTAA,MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVQGQQLSLTGTDLEVELVGRVQLEEPAEPGEITVPARKLMDICKSLPNDALIDIKLDDSKLIVKAGRSRFTLSTLPANDFPTVEEGPGSLTFNLVQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSAGILRAVATDGHRLAMCSMSADIEHADRHQVIVPRKGILEMARLLTEQDGMVSIVLGQHHIRATTGEFTFTSKLVDGKFPDYERVLPKGGDKLVLGDRQSLREAFSRTAILSNEKYRGIRLQLANGQLKIQANNPEQEEAEEEIGVEYNGEALEIGFNVSYLLDVLSVMTTEQVRLILSDSNSSALVQESDNDDSAYVVMPMRL,,,,,,,,,Cytoplasmic,Class 3,,TIGR00663,dnan,"DNA polymerase III, beta subunit",equivalog,2.70E-118,2.7.7.7,DNA metabolism,"DNA replication, recombination, and repair",PF00712PF02767PF02768,"DNA_pol3_beta, DNA polymerase III beta subunit, N-terminal domain. A dimer of the beta subunit of DNA polymerase beta forms a ring which encircles duplex DNA. Each monomer contains three domains of identical topology and DNA clamp fold..DNA_pol3_beta_2, DNA polymerase III beta subunit, central domain. A dimer of the beta subunit of DNA polymerase beta forms a ring which encircles duplex DNA. Each monomer contains three domains of identical topology and DNA clamp fold..DNA_pol3_beta_3, DNA polymerase III beta subunit, C-terminal domain. A dimer of the beta subunit of DNA polymerase beta forms a ring which encircles duplex DNA. Each monomer contains three domains of identical topology and DNA clamp fold..",COG0592,"DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) [DNA replication, recombination, and repair].","DNA replication, recombination, and repair"
NC_004578,Chromosome,PSPTO_0003,NP_789865,28867246,Protein,3039,4142,recF,,recombination protein F,,NA,ATGTCTCTTAGTCGCGTCTCGGTCACCGGGGTGCGCAATCTGCACCCGGTGACCCTCTCCCCCTCCCCGCGTATCAATATCCTTTACGGTGCCAACGGCAGCGGCAAAACCAGTGTGCTGGAAGCGATCCATCTGCTGGGCATCGCCCGCTCGTTTCGCAGCAGTCGTCTGCTTCCCGTTATTCAGTACGAGCAGCCGTCATGTACGGTTTTCGGGCAGGTTGATCTCGCGCAAGGCGGCCACAGCAATCTGGGTGTTTCACGCGATAGGCAGGGTGAATTTCAGATTCGCATCGACGGCCAGAATGCACGCAGCGCTGCGCAGCTTGCCGAGATCCTGCCGCTGCAGTTAATCAATCCTGATAGCTTCCGATTACTTGAGGGCGCGCCGAAGATTCGCAGGCAGTTTCTGGACTGGGGAGTGTTCCACGTGGAACCTCGCTTCATGTCCACCTGGCAGCGCCTGCAGAAGGCCCTCAAGCAGCGAAACTCGTGGCTTCGGCATGGTACACTTGACGCCGCTTCGCAGGCGGCATGGGACCGGGAGCTGTGTTTGGCAAGTGACGAGATCGATGAGTTTCGTCGAGCCTATATCAAGGCATTGAAGCCCGTCTTTGAAAAGACTTTGAGCGAACTTGTTGAACTTGAAGGTTTGACCCTTAGCTACTACCGAGGATGGGACAAGGAAAAAGAGCTGAGCACTGTGCTCGCCTCCTCCCTGAATCGCGATCAGCAAATGGGCCACACCCAGGCAGGACCACAACGTGCTGATCTGCGCCTTAGATTAGGTGCCCACAACGCGGCAGATATCTTGTCACGTGGTCAGCAAAAATTGGTGGTCTGTGCACTGCGTATTGCTCAAGGACACCTGGTCAGCCAGGTCCGTCGCGGCCAGTGTATTTACCTGGTGGATGACTTGCCCTCCGAACTGGACGACAACCATCGACGCGCGCTTTGCCGCTTGCTGGAAGAATTACGCTGCCAGGTATTTATCACCTGTGTAGATCAAGAATTTTTGAGGGAAGGCTGGCAGACGGATACGCCAGTCGCATTGTTCCACGTGGAACAAGGCCGTATCACCCAGACCCACGACCATCGGGAGTGA,MSLSRVSVTGVRNLHPVTLSPSPRINILYGANGSGKTSVLEAIHLLGIARSFRSSRLLPVIQYEQPSCTVFGQVDLAQGGHSNLGVSRDRQGEFQIRIDGQNARSAAQLAEILPLQLINPDSFRLLEGAPKIRRQFLDWGVFHVEPRFMSTWQRLQKALKQRNSWLRHGTLDAASQAAWDRELCLASDEIDEFRRAYIKALKPVFEKTLSELVELEGLTLSYYRGWDKEKELSTVLASSLNRDQQMGHTQAGPQRADLRLRLGAHNAADILSRGQQKLVVCALRIAQGHLVSQVRRGQCIYLVDDLPSELDDNHRRALCRLLEELRCQVFITCVDQEFLREGWQTDTPVALFHVEQGRITQTHDHRE,,,,,,,,,Cytoplasmic,Class 3,,TIGR00611,recf,DNA replication and repair protein RecF,subfamily,2.10E-140,,DNA metabolism,"DNA replication, recombination, and repair",PF02463,"SMC_N, RecF/RecN/SMC N terminal domain. This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination..",COG1195,"RecF, Recombinational DNA repair ATPase (RecF pathway) [DNA replication, recombination, and repair].","DNA replication, recombination, and repair"
NC_004578,Chromosome,PSPTO_0004,NP_789866,28867247,Protein,4147,6564,gyrB,,DNA gyrase subunit B,,NA,ATGAGCGAAAACCAAACGTACGACTCGTCCAGCATTAAAGTGCTGAAAGGACTTGATGCCGTACGCAAGCGTCCCGGAATGTACATCGGTGATACAGACGATGGCAGCGGTCTGCACCATATGGTGTTCGAGGTGGTTGATAACTCGATCGACGAAGCATTGGCAGGCCATTGCGACGACATCAGCATCATCATCCATCCAGACGAATCTATCACCGTGCGCGACAACGGCCGCGGTATTCCGGTAGACGTGCATAAAGAAGAAGGCGTGTCGGCAGCCGAAGTCATCATGACCGTGCTCCACGCGGGTGGTAAGTTCGATGACAACTCCTACAAAGTATCCGGCGGTTTGCACGGTGTAGGTGTTTCCGTGGTCAACGCCCTTTCAGAACTTCTGTTGCTGACAGTGCGTCGCAGCGGCAAGATCTGGGAACAGACCTACATTCACGGTGTTCCACAAGAACCGATGAAAATCGTCGGCGAAAGCGACAGCACCGGCACCCAGATTCACTTCAAGCCATCTGCTGAGACCTTCAAGAATATCCACTTCAGCTGGGACATTCTGGCCAAGCGGATCCGTGAACTGTCGTTCCTGAACTCCGGTGTTGGCATCGTCCTCAAGGACGAGCGTAGCGGCAAGGAAGAACTGTTCAAGTACGAAGGCGGTTTGCGTGCGTTCGTTGAATACCTGAACACCAACAAGACGCCGGTCAACGAAGTGTTCCACTTCAATGTCCAGCGCGATGACGGTATTGGCGTCGAGATTGCCCTGCAGTGGAACGACAGCTTCAACGAGAACCTGTTGTGCTTCACCAACAACATTCCACAGCGCGATGGCGGCACTCACCTGGTGGGGTTCCGATCCGCACTGACGCGTAACCTGAACAACTACATCGAGCAGGAAGGTCTGGCCAAGAAGCACAAGGTCGCGACCACCGGTGACGATGCGCGTGAAGGTCTGACTGCAATTATCTCGGTCAAAGTACCTGATCCGAAGTTCAGCTCGCAGACCAAAGACAAGCTGGTTTCGTCCGAAGTCAAAACTGCAGTCGAACAGGAAATGGGCAAGTACTTCTCCGACTTCCTGCTGGAAAACCCGAACGAAGCCAAAGCCGTCGTCGGCAAGATGATCGACGCAGCCCGTGCCCGTGAAGCCGCGCGCAAGGCCCGTGAGATGACTCGCCGTAAAGGCGCGCTGGACATCGCCGGCTTGCCAGGCAAACTGGCTGACTGCCAGGAAAAAGACCCTGCCCTCTCCGAACTGTACCTGGTGGAAGGGGACTCTGCTGGCGGATCAGCCAAGCAGGGACGTAACCGTAGAACCCAGGCCATCCTGCCTCTTAAGGGCAAGATTCTGAACGTTGAAAAAGCACGCTTCGACAAGATGATCTCTTCTCAGGAAGTGGGCACCTTGATCACCGCGCTGGGCTGTGGCATTGGCCGCGAAGAGTACAACATCGACAAGTTGCGCTATCACAACATCATCATCATGACCGATGCTGACGTCGACGGCTCGCACATCCGCACCCTGCTGCTGACCTTCTTCTTCCGTCAGTTGCCGGAGCTAATCGAGCGTGGCTACATATACATCGCTCAGCCGCCGCTGTACAAGGTCAAGAAAGGCAAGCAGGAGCAGTACATCAAGGACGACGAGGCCATGGAAGAATACATGACCCAATCGGCCCTTGAAGACGCCAGTCTGCACCTCAGCGAGTCTGCACCGGGTATCTCGGGCACCGCGCTGGAGAAACTGGTTCACGACTTCCGCATGGTCATGAAAACCCTCAAGCGCCTCTCGCGTCTGTACCCACAGGAATTGACCGAGCACTTCGTCTACCTGCCGCCAATCACCCTGGAGCAGCTATCCGACCACGAGGGCATGCAAGCCTGGCTGGCACTGTTCGACGTGCGTCTGCGCACTGGCGAGAAGTCGGGTCTGGTCTACAAAGCCAGCCTGCGCGAAGACCGTGAGCGTAACGTCTGGCTGCCAGAGGTCGAACTGATCTCCCACGGCCTGTCGAATTACATCACCTTCAACCGCGACTTCTTCGGCAGCAACGACTACAAGACCGTCACGGCCCTGGGCGCGCAGATAAGCACGCTGCTGGAAGAAGGCGCGTACGTGCAACGTGGCGAGCGCAAAAAGCCCGTCACCGAGTTCAAACAAGCCCTCGCCTGGCTGATGGCTGAAAGCACCAAGCGTCATACCATCCAGCGCTACAAAGGACTGGGTGAAATGAACCCGGATCAGCTCTGGGAAACCACTATGGACCCAAGCGTGCGTCGCATGCTCAAAGTCACTATCGAAGACGCCATTGGCGCTGACCAGATCTTCAACACCCTGATGGGTGATGCGGTCGAACCACGCCGTGACTTCATCGAGAGCAATGCGCTGGCGGTGTCCAACCTGGACTTCTGA,MSENQTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDISIIIHPDESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSELLLLTVRRSGKIWEQTYIHGVPQEPMKIVGESDSTGTQIHFKPSAETFKNIHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEELFKYEGGLRAFVEYLNTNKTPVNEVFHFNVQRDDGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNNYIEQEGLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSDFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSELYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKKGKQEQYIKDDEAMEEYMTQSALEDASLHLSESAPGISGTALEKLVHDFRMVMKTLKRLSRLYPQELTEHFVYLPPITLEQLSDHEGMQAWLALFDVRLRTGEKSGLVYKASLREDRERNVWLPEVELISHGLSNYITFNRDFFGSNDYKTVTALGAQISTLLEEGAYVQRGERKKPVTEFKQALAWLMAESTKRHTIQRYKGLGEMNPDQLWETTMDPSVRRMLKVTIEDAIGADQIFNTLMGDAVEPRRDFIESNALAVSNLDF,,,,,,,,,Unknown,Class 3,,TIGR01059,gyrB,"DNA gyrase, B subunit",equivalog,0,5.99.1.3,DNA metabolism,"DNA replication, recombination, and repair",PF00204PF00986PF02518,"DNA_gyraseB, DNA gyrase B. This family represents the second domain of DNA gyrase B which has a ribosomal S5 domain 2-like fold. This family is structurally related to pfam01119..DNA_gyraseB_C, DNA gyrase B subunit, carboxyl terminus. The amino terminus of eukaryotic and prokaryotic DNA topoisomerase II are similar, but they have a different carboxyl terminus. The amino-terminal portion of the DNA gyrase B protein is thought to catalyse the ATP-dependent super-coiling of DNA. See pfam00204. The carboxyl-terminal end supports the complexation with the DNA gyrase A protein and the ATP-independent relaxation. This family also contains Topoisomerase IV. This is a bacterial enzyme that is closely related to DNA gyrase,..HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. This family represents the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90..",COG0187,"GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair].","DNA replication, recombination, and repair"
NC_004578,Chromosome,PSPTO_0005,,28867248,Protein,7092,8798,,,"type I restriction-modification system, M subunit, putative",,NA,TTGTACAATCAGGCACACTTTTTTCTGATATGCCCATGCTGGATGGCAGTAGTCACTGGCGTTGGGCTTCGTGCTTTTATAGGGATTGATTTACCCATGGCTGACAAGTTGTCACTCGAAACGCTGGAGTCTTGGCTCTGGGAATCCGCGAACATTCTGCGCGGTTCCATCGACTCTTCCGACTTCAAGAACTACATCTTCGGCCTGCTCTTTCTCAAACGCTACAACGACGTGTTCGACGAGCGTGTCACCAAGCTGAGGGAAGAGGAAAACCTGAGCTATGGCGAAGCTCAGGAGGAAATCGAGGACAAATGGGGCAAGTACCCTATCAGTGCCCGCTGGTTTGACTTGATTTCACGTACCGAGAATATCGGGGAGGCTCTGGACAAGGCGTTCGCGACCATTGAGGCCAACAACCCCGAATTGCAACACGTACTGACCGCTACCCAGTATGGTGACAAGCGAGTGCTGGCGGATGCCACCTTGCAGCGCCTGCTGCGTCACTTTAACCAGTACAAATTGGGCAATGACGACCTGTATAAGGCCGACATGCTGGGCGATGCTTACGAGTATTTGATCAAGCAGTTTGCCGACGATGCGGGTAAGAAAGGTGGCGAGTTCTATACGCCAAAGGCAGTGGTGCAACTGGTGGTTGAGTTGATTGATCCGCGACCGGGGCACAGTGTGTATGATCCCACCTGCGGCAGTGGTGGTATGTTGGTTGAGAGCGCCCATCATGTATCTGGTTTGCCCGATGGCACCTTGATGGGCAAGCCTAATGTGCTGCTGTACGGGCAGGAAAAGAACCTAGGCACCTGGGCCATTGCCAAGCTCAATCTTTACCTGCACAACATGCATGCATCTATTGAACGTGGAGATACGCTGGTCGAACCCAAACACCTCGACGGCGATTACCTGAAGACATTCGACAGGGTTATTGCTAATCCTCCGTTCTCAGCCAAATCCTGGTGGACTCCGCTGGAGTTGAGCAACGAAAACGAGCAGGAGAATGGCAAGAAGGTCAAAGCGCCCAACTATAAGCAGGTCAGCGATCCCTATGGTCGGTTAGTTTATGGCGTCCCGCCACGGGGCTATGCTGACCTTGCCTTTGCTCAGCATATGCTGGCTAGCCTCAAGGCTGATGGCCGCATGGGCGTTATCCTGCCCCATGGAGTGCTGTTTCGAAGTGGCGAGGAAGGCAAGATCCGCGAAGGACTGCTGTTCGGGACTGGCGCCGCCAGCGGCAACCAGCCGGGCGACGTGATTGAAGCCATCGTCGGCCTGCCCTCAGCCCTGTTCTACAACACCGGCATCCCGGCTTGCGTGTTGATCCTGAACAAGCAAAAACCCTCTGCCCTAAAGGACAAGGTCATCATCATTGACGGCAGCCGAGACTATCTAGAAGGTAAGGCGCAGAACAGCCTACATGCTGAAGATATCTTGCGCATTGTCAGCACCCACAAGGCGGCATTTGAGCAGCAAGTTGAGGTCGAAAACTATTGTCGGTTGGTGACTCTGGACGAAATCCGTAGCAATGACGGTAACCTCAACATTGTCCGTTACATCGATAACGGTGAGTCCGACGAGGTCGTAAATGTGGCTGCCACTTTGGCGCATATGGCGACCCTGGCCAAGGAGGAAGCGCAGATTGATCAGCGGCTCAATCGCTATTTGATGGAGTTGGGACTGCTGGAGACTGGGGTATGA,MYNQAHFFLICPCWMAVVTGVGLRAFIGIDLPMADKLSLETLESWLWESANILRGSIDSSDFKNYIFGLLFLKRYNDVFDERVTKLREEENLSYGEAQEEIEDKWGKYPISARWFDLISRTENIGEALDKAFATIEANNPELQHVLTATQYGDKRVLADATLQRLLRHFNQYKLGNDDLYKADMLGDAYEYLIKQFADDAGKKGGEFYTPKAVVQLVVELIDPRPGHSVYDPTCGSGGMLVESAHHVSGLPDGTLMGKPNVLLYGQEKNLGTWAIAKLNLYLHNMHASIERGDTLVEPKHLDGDYLKTFDRVIANPPFSAKSWWTPLELSNENEQENGKKVKAPNYKQVSDPYGRLVYGVPPRGYADLAFAQHMLASLKADGRMGVILPHGVLFRSGEEGKIREGLLFGTGAASGNQPGDVIEAIVGLPSALFYNTGIPACVLILNKQKPSALKDKVIIIDGSRDYLEGKAQNSLHAEDILRIVSTHKAAFEQQVEVENYCRLVTLDEIRSNDGNLNIVRYIDNGESDEVVNVAATLAHMATLAKEEAQIDQRLNRYLMELGLLETGV,,,,,,,,,Unknown,Class 3,,TIGR00497,hsdM,"type I restriction-modification system, M subunit",equivalog,1.70E-49,2.1.1.72,DNA metabolism,Restriction/modification,PF02384PF01170,"N6_Mtase, N-6 DNA Methylase. Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The R-M system is a complex containing three polypeptides: M (this family), S (pfam01420), and R. This family consists of N-6 adenine-specific DNA methylase EC:2.1.1.72 from Type I and Type IC restriction systems. These methylases have the same sequence specificity as their corresponding restriction enzymes..UPF0020, Putative RNA methylase family UPF0020. This domain is probably a methylase. It is associated with the THUMP domain that also occurs with RNA modification domains..",COG0286,"HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms].",Defense mechanisms
NC_004578,Chromosome,PSPTO_0006,,28867249,Protein,8861,10168,,,"type I restriction-modification system, S subunit, EcoA family",,NA,ATGGGGGTAATTGGCGATTTTGTAACTGCGCTGCAAGCAGGTGTTAGCGTCAATGCTTTTGAAACTGACTCTGGCTGCACAGAGGGCGAGCTTGGTGTGCTGAAGACCAGTGCTGTACTCCGTGGTAGATTTTTTGCGGAGCAGTACAAGGTAGTCGTCGCGGAAGACATGGGAAGAGTGGCAACAAGCGTTGTCGGAGACCGGATCATCATCAGTCGCATGAATACTCCTGCGCTTGTTGGTGAGTCAGGCTATGTGACAAAGGATGAGCCCAATCTCTTCCTACCTGATCGCCTTTGGCAAACTGAGCCTTCAGACCGTCCACACTCACAGCGTTGGCTGTCTTACTGGTTGCAGCATCCTGGGGTTCGCCGATTGATTGCTGCCAGTGCAACTGGCACCAGCAACAGCATGAAGAACATCTCGAAAGAGACAGTGTTGTCGCTGCCTGTTCCTCGTACCCCACTGCCCGAACAACAAAAGATCGCCGCCATCCTCACTGCGGTTGACGATAAGTTGGACGTAATTTTCCGTCAGATTAAAGCCACACAGGCTCTGAAACAGGGCCTGATGCAAGCCCTGTTCAGCCGGGGCGTGGGTACCCAAGATACTACTGGTCGTTGGATTCAGCATACCGAGTTCAAGGACAGTGAACTCGGCACGATTCCAGCGCTATGGGATGTTGGCGTGATAGCGGATTACGTATCAGCTCTTCGTTCAGGGGTCAGTGTTAACGCAGAAGATCGTATGCATGGTGATGATGAGATCGGTGTCCTCAAGGTGAGTTGCGTACTCCGTGGTGGGTTCTATCCAAATTGTCATAAGACAGTTGTCCCCGAGGAGCGAGAGCGCGTCGCTGAGCCCGTTTTACAGGGACGTATTATCGTCAGTCGAGCGAACACTCCTGCATTAGTCGGTGAATCAGCGTATGTCAATTCTGCGTGGCCCAACTTGTTTCTCCCAGACAAACTCTGGCAAATCGAGCCCTCTGAAAGCCCCCATTCGATAAAGTGGCTGTCTTTTTATTTGCAGTCACCATTTGTTCGTCAAGAAATCAGTAAGGCAGCAACGGGCACAAGTGGCAGCATGAAGAACATCTCCAAGCCAGCATTTTTAAGCATTCGGATGCCTTTAGTACCGCTAGCTGAGCAAGAGCACATTGCAGCGATTCTTTCTGACGTTACATCCAAAATTGAAGCCTTGAACAGTAAGCAAAACCATTTCCAAACCCTCAAACGCGGGCTGATGCAAAAACTGCTAACCGGCGAATGGCGGGTCAAGATCGATAGCCCTACCGGTACGGTCTGA,MGVIGDFVTALQAGVSVNAFETDSGCTEGELGVLKTSAVLRGRFFAEQYKVVVAEDMGRVATSVVGDRIIISRMNTPALVGESGYVTKDEPNLFLPDRLWQTEPSDRPHSQRWLSYWLQHPGVRRLIAASATGTSNSMKNISKETVLSLPVPRTPLPEQQKIAAILTAVDDKLDVIFRQIKATQALKQGLMQALFSRGVGTQDTTGRWIQHTEFKDSELGTIPALWDVGVIADYVSALRSGVSVNAEDRMHGDDEIGVLKVSCVLRGGFYPNCHKTVVPEERERVAEPVLQGRIIVSRANTPALVGESAYVNSAWPNLFLPDKLWQIEPSESPHSIKWLSFYLQSPFVRQEISKAATGTSGSMKNISKPAFLSIRMPLVPLAEQEHIAAILSDVTSKIEALNSKQNHFQTLKRGLMQKLLTGEWRVKIDSPTGTV,,,,,,,,,Unknown,Class 3,,,,,,,,,,PF01420,"Methylase_S, Type I restriction modification DNA specificity domain. This domain is also known as the target recognition domain (TRD). Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity subunit (this family), two modification (M) subunits and two restriction (R) subunits..",COG0732,"HsdS, Restriction endonuclease S subunits [Defense mechanisms].",Defense mechanisms
NC_004578,Chromosome,PSPTO_0007,,28867250,Protein,10179,11063,,,hypothetical protein,,NA,ATGGACGAAATCATCCCCCTGCCCTCAGATCCTCTGCCTGACCTTCAGCGCACCGTGCAGCGCAAGCTTGGGCGCTGCATATTGCAGTCGCAGCAGTACGAGCGGCTGCTGAAGGCCATGGTGGCCCATGGCGAGTTGAGTGGCCCTCCGGAACGACTTCAGGCGATTCGCGACGAGAAGGTTGCCTGTGCCGATAAGAAAACTCTGGGTACCTTGGTGGGGATGCTGACCGAGAGCTATCTGAAACTGCCGGACTTGTCTGATGAGCCAGAGCAAGCGGAGCCAATTGATCGGGTATGGGTTAGCTTCCGATGTCAGATGGAGTTAACCGAAGAACGTTATGCCGAGACCAAGGCTGCGCTGAAGGAGTTGGTCGACCTGCGTAACGAGTTGGTGCACCACTTCCTTCAGCGCTTCGACCTTTGGGGCGTCGATGGCTGTATAGCCGCTGAGTCATATCTCGATGAAAGTTACGAAACCATCGACGGCCACTACCTGACGCTGCGCGACTGGGCCAAATCCATGGATGAGGCTCGACAGCTTATGGTGTCCTTTATGCAAACCCAAGAGTATAGGGATGCCGTTATCAACGGTATTTGGCTAGATGGCATCGTACACTGGCCCAGCAGTGGGATAACTGCCTGCTTGCGTGAAGCGGAAACTAAGCTGGCCCATGCAGGTTGGACACCTCTTTTCGAGGCTATTCGTTGGATTGCCAAGACCTATCCAGAGCTGACGCCGAAGCGCTATGGCTGCGGTAGTTGGCGTCATGTCATCCATGAGTCGCAGCAGTTTGAAATTCGTAAGCAAAGCCAAGCCGATAATGGCCCTACGGTGGTTTGGTATCGAAGTCGCCCGAGGGAAACCTCCAAGGAACAGGAGTAA,MDEIIPLPSDPLPDLQRTVQRKLGRCILQSQQYERLLKAMVAHGELSGPPERLQAIRDEKVACADKKTLGTLVGMLTESYLKLPDLSDEPEQAEPIDRVWVSFRCQMELTEERYAETKAALKELVDLRNELVHHFLQRFDLWGVDGCIAAESYLDESYETIDGHYLTLRDWAKSMDEARQLMVSFMQTQEYRDAVINGIWLDGIVHWPSSGITACLREAETKLAHAGWTPLFEAIRWIAKTYPELTPKRYGCGSWRHVIHESQQFEIRKQSQADNGPTVVWYRSRPRETSKEQE,,,,,,,,,Unknown,Class 3,,,,,,,,,,,,,,
NC_004578,Chromosome,PSPTO_0008,,28867251,Protein,11067,14366,,,"type I site-specific deoxyribonuclease, HsdR family",,NA,ATGAGCCAGTCACCGGAGAAAGTCGGGGTTGAACTGCCCGCCATTAATTGGCTGGTCAAGCTGGGCTACACCCATCTATCCAGTAATCAGGTACAGGTTGAATATCGTCACCTGGCACCGGTATTGGACGATGTGTTGCAGGCTCGACTGCTGATCCTCAACCCGTGGCTGGAGAGCGTACCCGGTGGCATCCCTACCGCACTGATCGAGCTACGTAAACGTCTCAACGATGAGCTGTTGCCCGCGAATAAGGCGTTCTGGGAACAGGTGGTGCACCGTTCGGATATTCAGGTGAAGGACGTCGAAGGCAGGCCGCGTAGTGTGCGTTTCTTCGACGCCAGTGATGCCGCCAACAACGACTTCCATGTGGTTGATCAGTATGTGGGGCGCAACGCTGATGGGGATTTTTTCCGTCCCGACCTACTCCTGTTTGTGAATGGCCTGCCCCTGGCCATCATCGAATGCAAAGCCAGCCATCACCGTCTGGATGAGGCCTTGGGGCAACTGGATGGCTATCAGAACTGTTTCCCAACCCAGTTTGTATTCAACCAGGTATGCGTTGGGCTTAATCGGCGTGAGGGGGCATATGGTGCGATCCTTACCAAGCCTGCGTACTACGCCCGCTATCGGTTGCAGGCGCAGGAATCTGCTGCTGTAGCTGCTTTGCTGGGCGATGTCCCGAGTGAGCAGGAAAGCCTGCTGTGGGCATTGTTCGAGCCGAGTCGCTTCCTGCAACTGATTACACATTTTGCGCTGTTCGAAACCCGCGACGGCAAGACAATGAAAAAGCTGCCGCGCTATCAACAATGGCGGGCCGTGCGCAAAACGTTGGATCGCCTGTGTGCTCCAAAACCCATGGGCGGTGTTGTCTGGCACACCCAGGGTAGCGGTAAGTCCTTGACCATGGCCCTGCTCGCTCGCATGTTGCGTGCCGATAGCACCGGTTTGAACAACCCTACTGTGTTGGTACTGACCGACCGCAAAGACCTCGACAAACAGATCTTCGATACTTTCCATGCAGTGGGCATCAGTGCTATTCAGGCCGTGTCGGTTGAAGGCTTGCTGAAGATGTTGTCCAACGACTACGGCAGTGTGTTCACCAGCACGGTGCAGAAGTTCCAGGAGAACGAGCAGCCCGGTGAGCAGCCTGCTGTGACTCCTGATGAGGAAGACAATGCCCTGCAAGCAACCCGGCACCGGCGGATTCGCGAGGAGAAGGACTTCTTCATCCTGCATGAGCGCAATGTTCGCCACCGGCAAGTGGATGAGAACGGTGTGCTGGTGAAAGCCAAGTGGGAAGAAATCAGCCGGGAGAAGGTACATTTCCGGGTGTTGAGTACCAAATCCAATTTCTATGTGCTGGTCGATGAAGCTCACCGTAGCCAGTACGATTTCCTCGCGGCTTTTATGCGCGCCAGTTTGCCCAACGCCAAGTTCATTGCCTTCACAGGTACGCCGCTGCTGCAAGAGGACAAACACACACTGGGTGAGTTTGGCGGTGGTGAATACATCGACGAATACCGCCTGCATGAAGCGGTGGCGGATGGCGCGACCCTGTCCATCAAATACCAGGATGCCTGGGTAGCATTGTCGGCCAACGCTGAATTGGATGCTGCATTCAAAGAGCAGTTCTCTGGCCAGAGTGAAGCTCGCCAGCACGAGCTTAAGCGCGAACTGCTGCGCCGCTGGCGTCAGGCCGGTAACCGTATGGAACAGGTCGCTGAACATCTGGTCGAGCACTTCCTCAGTAACGTAAAGGCCAAGGGCTTGAAGGCCATGCTGGTGTGCGACGGACGCGATATGGCAGTGGGTTACAAGGATCTGCTCGATGCAATCATGGCCGAGCGAGTGCAAAAAGGGCTGCCAACCTTTGACAGCAAGGTGGTTATTTCCCTGGCCAGCATCACCGCTTCCCGCACGGGTGCTTCTGCTATGGAGGAGGCATCAGAGTACGAGGTCGACCTCGACAAGATCCAAAGCATCGAGGAACGGGTCAAGGCCGAAGTGAAAGCCGGAAACACCCCGGTGGCCATGCCGTCCGAGCAGATTGGCAACTTTGTCAGCAAGCTGTTCCCCCTGCCCTACGGAGAGGAAAGTAGTGGGTTGGATGGTAAACCGCAGGCGAACAACGTTGGGCTGATCATTGTCTCCGACATGCTCCTGACCGGGTGGGATGCCCCGATTGTCGGCACTATGTACCTCGACAAACCGCTCAAGGAACACACCCTTTTGCAGGCTATCGCACGGGTGAACCGCACCCTGCCCGGCAAGAATGCCGGTTACATCGTGGATTACCACGGAGTGGTCGAGCACCTCGACCATGCGCTGAAAATTTACGGCGGCGAAGTGAAGCCTTCACAGGTCTGGGAAGGTGTCGAAACCGAACTGCCCAAGCTGCAAGCCACGCTTGACCGCATACTTAAGCTGCTGCCGAAAAAACATGATCCGGTTGCGCAGCGTGAGGGGTACAAGACTGACGCCGAGCGTTTCCTAGATCCAGCTACCAGACTGGACATGGTCGAAGAGTTCCTGGACTTGGTGAAGCAGTTCAACCGCTCTGTGGACATCATTCTGCCGGATGTGCGCGGCGTGCCCTTCAAGCCCTACTTCACCCTGTTAGGTGAAATACGGTTGATGCTGCGGGACAAGCTGCCAGGTAATACCTACAAGGAGCGCATCACCAAGCTGGAGTCTGTACTGCTTCAACAGCTGCTGGATGAGTACGTTGCCGCCAGTCCGGCTAAGAGCCTATTGGGCCATGAGGTGTCGATTCTTGATGCCAGCGACATGGCGCGCCTGAAGCAGCTGGCCAGCCCTGGTAGCCGAGCCCTGGTGATGAAGAACCAGCTGAAACATACAATTGTCACCGGCAAGGACAAAGACCCTGCATTCTTCGACAAGCTGGCTGAGGAGCTGCAAAAGCTGCTGGAAGAAGAAAAGGCGGGTCGCATTACCCAGGCTAAATTTCTGGAGCAACTGGAATTGTTCGGTCAGCGCATCCAGGACAAGGACAACACCGGATTTATCAAACCCGCACATTCAGCGGTGTATCACTACCTAACCGCGCTACTGGCCGAGGACACGGCCAGGGTGGCAACGACCAAACTGTTCGAGGATGGAGAGCTGAGCCGGACGGTCGCCACCGACAACTGGAAGAAGATGCCGGATCTGCACCCGGACATCAGAGACCATCTGCGCGGGTTGTTGATGCCGCTGGCGGGGTGGGAGCGCTCAGTAGCACGTGAACACGCCAAGCGAATCTTGATGTATAGGAATTTCAATAATTCCTATACAGGGTAA,MSQSPEKVGVELPAINWLVKLGYTHLSSNQVQVEYRHLAPVLDDVLQARLLILNPWLESVPGGIPTALIELRKRLNDELLPANKAFWEQVVHRSDIQVKDVEGRPRSVRFFDASDAANNDFHVVDQYVGRNADGDFFRPDLLLFVNGLPLAIIECKASHHRLDEALGQLDGYQNCFPTQFVFNQVCVGLNRREGAYGAILTKPAYYARYRLQAQESAAVAALLGDVPSEQESLLWALFEPSRFLQLITHFALFETRDGKTMKKLPRYQQWRAVRKTLDRLCAPKPMGGVVWHTQGSGKSLTMALLARMLRADSTGLNNPTVLVLTDRKDLDKQIFDTFHAVGISAIQAVSVEGLLKMLSNDYGSVFTSTVQKFQENEQPGEQPAVTPDEEDNALQATRHRRIREEKDFFILHERNVRHRQVDENGVLVKAKWEEISREKVHFRVLSTKSNFYVLVDEAHRSQYDFLAAFMRASLPNAKFIAFTGTPLLQEDKHTLGEFGGGEYIDEYRLHEAVADGATLSIKYQDAWVALSANAELDAAFKEQFSGQSEARQHELKRELLRRWRQAGNRMEQVAEHLVEHFLSNVKAKGLKAMLVCDGRDMAVGYKDLLDAIMAERVQKGLPTFDSKVVISLASITASRTGASAMEEASEYEVDLDKIQSIEERVKAEVKAGNTPVAMPSEQIGNFVSKLFPLPYGEESSGLDGKPQANNVGLIIVSDMLLTGWDAPIVGTMYLDKPLKEHTLLQAIARVNRTLPGKNAGYIVDYHGVVEHLDHALKIYGGEVKPSQVWEGVETELPKLQATLDRILKLLPKKHDPVAQREGYKTDAERFLDPATRLDMVEEFLDLVKQFNRSVDIILPDVRGVPFKPYFTLLGEIRLMLRDKLPGNTYKERITKLESVLLQQLLDEYVAASPAKSLLGHEVSILDASDMARLKQLASPGSRALVMKNQLKHTIVTGKDKDPAFFDKLAEELQKLLEEEKAGRITQAKFLEQLELFGQRIQDKDNTGFIKPAHSAVYHYLTALLAEDTARVATTKLFEDGELSRTVATDNWKKMPDLHPDIRDHLRGLLMPLAGWERSVAREHAKRILMYRNFNNSYTG,,,,,,,,,Unknown,Class 3,,TIGR00348,hsdR,"type I site-specific deoxyribonuclease, HsdR family",subfamily,4.90E-93,3.1.21.3,DNA metabolism,Restriction/modification,PF04313PF04851,"HSDR_N, Type I restriction enzyme R protein N terminus (HSDR_N). This family consists of a number of N terminal regions found in type I restriction enzyme R (HSDR) proteins. Restriction and modification (R/M) systems are found in a wide variety of prokaryotes and are thought to protect the host bacterium from the uptake of foreign DNA. Type I restriction and modification systems are encoded by three genes: hsdR, hsdM, and hsdS. The three polypeptides, HsdR, HsdM, and HsdS, often assemble to give an enzyme (R2M2S1) that modifies hemimethylated DNA and restricts unmethy