ID NC_002516; SV NC_002516; circular; unassigned DNA; STD; UNC; 6264404 BP. XX AC NC_002516; XX DE Pseudomonas aeruginosa PAO1 chromosome, complete genome XX CC Product name confidence: CC Class 1: Function experimentally demonstrated in P. aeruginosa. CC Class 2: Function of highly similar gene experimentally demonstrated in CC another organism (and gene context consistent in terms of pathways its CC involved in, if known). CC Class 3: Function proposed based on presence of conserved amino acid CC motif, structural feature or limited sequence similarity to an CC experimentally studied gene. CC Class 4: Homologs of previously reported genes of unknown function, or no CC similarity to any previously reported sequences. XX CC Subcellular localization confidence: CC Class 1: Subcellular localization experimentally demonstrated in same CC species. CC Class 2: Subcellular localization of highly similar gene experimentally CC demonstrated in another organism. BLAST expect value of 10e-10 for query CC within 80-120% of subject length. CC Class 3: Subcellular localization computationally predicted by PSORTb CC V2.0. XX FH Key Location/Qualifiers FH FT source 1..6264404 FT /db_xref="taxon:208964" FT /mol_type="genomic DNA" FT /strain="PAO1" FT /organism="Pseudomonas aeruginosa" FT /sub_strain="PAO1-UW" FT gene 483..2027 FT /locus_tag="PA0001" FT /name="dnaA" FT CDS 483..2027 FT /db_xref="GI:15595199" FT /function="DNA replication, recombination, modification FT and repair" FT /protein_id="NP_064721" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="chromosomal replication initiator protein DnaA" FT /translation="VSVELWQQCVDLLRDELPSQQFNTWIRPLQVEAEGDELRVYAPNR FT FVLDWVNEKYLGRLLELLGERGEGQLPALSLLIGSKRSRTPRAAIVPSQTHVAPPPPVA FT PPPAPVQPVSAAPVVVPREELPPVTTAPSVSSDPYEPEEPSIDPLAAAMPAGAAPAVRT FT ERNVQVEGALKHTSYLNRTFTFENFVEGKSNQLARAAAWQVADNLKHGYNPLFLYGGVG FT LGKTHLMHAVGNHLLKKNPNAKVVYLHSERFVADMVKALQLNAINEFKRFYRSVDALLI FT DDIQFFARKERSQEEFFHTFNALLEGGQQVILTSDRYPKEIEGLEERLKSRFGWGLTVA FT VEPPELETRVAILMKKAEQAKIELPHDAAFFIAQRIRSNVRELEGALKRVIAHSHFMGR FT PITIELIRESLKDLLALQDKLVSIDNIQRTVAEYYKIKISDLLSKRRSRSVARPRQVAM FT ALSKELTNHSLPEIGVAFGGRDHTTVLHACRKIAQLRESDADIREDYKNLLRTLTT*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: DNA metabolic process [goid GO:0006259] FT [evidence ISS]; FT GO_process: regulation of DNA replication [goid FT GO:0006275] [evidence IEA]; FT " FT gene 2056..3159 FT /locus_tag="PA0002" FT /name="dnaN" FT CDS 2056..3159 FT /db_xref="GI:15595200" FT /function="DNA replication, recombination, modification FT and repair" FT /protein_id="NP_064722" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="DNA polymerase III, beta chain" FT /translation="MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLT FT GTDLEVELVGRVVLEDAAEPGEITVPARKLMDICKSLPNDVLIDIRVEEQKLLVKAGRS FT RFTLSTLPANDFPTVEEGPGSLNFSIAQSKLRRLIDRTSFAMAQQDVRYYLNGMLLEVN FT GGTLRSVATDGHRLAMCSLDAQIPSQDRHQVIVPRKGILELARLLTEQDGEVGIVLGQH FT HIRATTGEFTFTSKLVDGKFPDYERVLPRGGDKLVVGDRQQLREAFSRTAILSNEKYRG FT IRLQLSNGLLKIQANNPEQEEAEEEVQVEYNGGNLEIGFNVSYLLDVLGVIGTEQVRFI FT LSDSNSSALVHEADNDDSAYVVMPMRL*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: DNA metabolic process [goid GO:0006259] FT [evidence ISS]; FT GO_component: DNA polymerase III complex [goid GO:0009360] FT [evidence IEA]; FT " FT gene 3169..4278 FT /locus_tag="PA0003" FT /name="recF" FT CDS 3169..4278 FT /db_xref="GI:15595201" FT /function="DNA replication, recombination, modification FT and repair" FT /protein_id="NP_064723" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="RecF protein" FT /translation="MSLTRVSVTAVRNLHPVTLSPSPRINILYGDNGSGKTSVLEAIHL FT LGLARSFRSARLQPVIQYEEAACTVFGQVMLANGIASNLGISRERQGEFTIRIDGQNAR FT SAAQLAETLPLQLINPDSFRLLEGAPKIRRQFLDWGVFHVEPRFLPVWQRLQKALRQRN FT SWLRHGKLDPASQAAWDRELSLASDEIDAYRRSYIQALKPVFEETLAELVSLDDLTLSY FT YRGWDKDRDLLEVLASSLLRDQQMGHTQAGPQRADLRIRLAGHNAAEILSRGQQKLVVC FT ALRIAQGHLINRAKRGQCVYLVDDLPSELDEQHRMALCRLLEDLGCQVFITCVDPQLLK FT DGWRTDTPVSMFHVEHGKVSQTTTIGSEA*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: DNA metabolic process [goid GO:0006259] FT [evidence ISS]; FT GO_process: SOS response [goid GO:0009432] [evidence IEA]; FT " FT gene 4275..6695 FT /locus_tag="PA0004" FT /name="gyrB" FT CDS 4275..6695 FT /db_xref="GI:15595202" FT /function="DNA replication, recombination, modification FT and repair" FT /protein_id="NP_064724" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="DNA gyrase subunit B" FT /translation="MSENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEV FT VDNSIDEALAGYCSEISITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGG FT KFDDNTYKVSGGLHGVGVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETD FT GSGTEVHFKPSPETFSNIHFSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGG FT LKAFVEYLNTNKTAVNEVFHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGG FT THLAGFRSALTRNLNNYIEAEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKD FT KLVSSEVKTAVEQEMGKYFADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGA FT LDIAGLPGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKA FT RFDKMLSSQEVGTLITALGCGIGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFF FT RQMPELIERGYIYIAQPPLYKVKRGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPG FT LSGAALEKLVNEYRGVIATLKRLSRLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKF FT QARLTAAEKSGLTYKASLREDRERHLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSL FT LGDQLNSLLEDGAYVQKGERKRPISAFKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLW FT ETTMDPNVRRMLKVTIEDAIAADQIFNTLMGDAVEPRRDFIESNALAVSNLDV*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: DNA metabolic process [goid GO:0006259] FT [evidence ISS]; FT GO_component: DNA topoisomerase complex (ATP-hydrolyzing) FT [goid GO:0009330] [evidence IEA]; FT " FT gene complement(7018..7791) FT /locus_tag="PA0005" FT /gene_synonym="plsC" FT /name="lptA" FT CDS complement(7018..7791) FT /db_xref="GI:15595203" FT /function="Fatty acid and phospholipid metabolism" FT /protein_id="NP_064725" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="lysophosphatidic acid acyltransferase, LptA" FT /translation="MSTVQAIRTVLFYLLLSASAFVWGTLSFFIAPILPFRARYRFVVQ FT NWCRFAIWLTRVVAGIRYEVRGLENIPEKPCVILSKHQSTWETFFLSGFFEPLSQVLKR FT ELLYVPFFGWALALLKPIAIDRSQPKLALKQLAKQGDECLKKGAWVLIFPEGTRIPVGQ FT MGKFSRGGTALAVNAGLPVLPIAHNAGQYWPKAGWAKYPGTIQVVIGPAMHAEGEGPRA FT IAELNQRAEAWVSETMAEISPIQQRVSHPEPSVVS*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT /note="GO_process: cellular lipid metabolic process [goid FT GO:0044255] [evidence ISS]; FT " FT gene complement(7803..8339) FT /locus_tag="PA0006" FT /gene_synonym="yaeD" FT CDS complement(7803..8339) FT /db_xref="GI:15595204" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_064726" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="conserved hypothetical protein" FT /translation="MSRSLLILDRDGVINLDSDDYIKTLDEWIPIPSSIEAIARLSQAG FT WTVAVATNQSGIARGYYDLAVLEAMHARLRELVAEQGGEVGLIVYCPHGPDDGCDCRKP FT KPGMLRQIGEHYGVDLSGIWFVGDSIGDLEAARAVDCQPVLVKTGKGVRTLGKPLPEGT FT LIFDDLAAVASALLQ*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 8671..10377 FT /locus_tag="PA0007" FT CDS 8671..10377 FT /db_xref="GI:15595205" FT /function="Membrane proteins" FT /protein_id="NP_064727" FT /localization_and_confidence="Unknown, Class 3 (primary); FT Unknown (This protein may have multiple localization FT sites), Class 3 (primary)" FT /product="hypothetical protein" FT /translation="VKRLKKTLHLSSLSLASLALSSAALAAAPVMLDQGKEWTESHRQD FT FYSRDQGSQVMPLPWLKALRQPDGTPFLADSLARYGYLPNPKAPAEGLPVGFTVAGTGA FT RQMVGMTCSACHTRQIEVKGTAYRIDGGPAIVDFQAFLADLDRAVGPLTSDDAAFDAFA FT KPILGANPPPGARDALLAAVKEWYEPYHTLIERALPKDTWGPARLDAVSMIFNRLTGLD FT IGTAPPYLIPDNIKAADAPVRYPFLWNAARQNKTQWPGFAANGNDLLGLARNVGEVYGV FT FATFHPQKSKFHLLGMDYLKINSANFHGLGKLEDLIKKIGPPKWPWAVDKHLARKGALI FT FARKTDEGGCVECHGIRIKDLVLWDTPLRDVGSDSRQHAILDGQVQTGVMEGARMPFGQ FT PLKATDGAFDVLAVAVAGSILQHFVPILGEKHDAKAAAVKPESVMTDETRQLLTAFQKP FT VRTQADPYPYESRVLQGIWAAAPYLHNGSVPTLEELLKPAAERVESFPVGSAYDVDKVG FT LAAQQTQFGSYVLKTTGCEQRDSGNSRCGHEYGTSLSAEEKRALLEYLKVL*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(10434..12488) FT /locus_tag="PA0008" FT /name="glyS" FT CDS complement(10434..12488) FT /db_xref="GI:15595206" FT /function="Amino acid biosynthesis and metabolism; FT Translation, post-translational modification, degradation" FT /protein_id="NP_064728" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="glycyl-tRNA synthetase beta chain" FT /translation="MSAKDFLVELGTEELPPKALNSLGEAFLSGIEKGLKAAGLSYAAA FT RFYAAPRRLAVLVEQLAVQQPDRTVNLDGPPLQAAFDASGNPTQAALGFAKKCGVDLQQ FT IDKSGPKLRFIQTIAGQPAAGLLPGIVEASLNELPIPKRMRWAARREEFVRPTQWLVML FT FGDDVVECEILAQKAGRESRGHRFHNPDNVRISSPAAYLEDLRGAHVLADFAERRELIA FT KRVAELAAEQQGSAIVPPSLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQK FT YFCLLDANGKLLPRFITVANVESKAPENIVSGNEKVVRPRLTDAEFFFKQDKKQPLESF FT NERLRNVVFQAQLGTVFEKAQRVSGLAAYIAERIGGNAQNASRAGILSKCDLATEMVGE FT FPEMQGIAGYYYATHGGEAEDVALALNEQYMPRGAGAELPSTLTGAAVAVADKLDTLVG FT IFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLVAAVNAAVEQYGDKVKAAGLAE FT QVLDFVFDRLRARYEDEGVDVAVYQSVRALKPSSPLDFDQRVQAVQAFRQLPEAEALAA FT ANKRVSNILAKSEDEVPPNVDASLLVEAAEKALGSAVANAESEVAPLAAARDYRAALAR FT LAALREPVDTFFADVMVNVDDAAVRANRYALLAKLRGSFLGVADISLLG*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: amino acid metabolic process [goid FT GO:0006520] [evidence ISS]; FT GO_process: cellular protein metabolic process [goid FT GO:0044267] [evidence ISS]; FT GO_component: glycine-tRNA ligase complex [goid FT GO:0009345] [evidence IEA]; FT " FT gene complement(12488..13435) FT /locus_tag="PA0009" FT /name="glyQ" FT CDS complement(12488..13435) FT /db_xref="GI:15595207" FT /function="Amino acid biosynthesis and metabolism; FT Translation, post-translational modification, degradation" FT /protein_id="NP_064729" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Cytoplasmic, Class 2 (primary); Cytoplasmic, FT Class 3 (primary)" FT /product="glycyl-tRNA synthetase alpha chain" FT /translation="VSQTTPAVRTFQDLILALQNYWAEQGCVVLQPYDMEVGAGTFHTA FT TFLRAIGPETWNAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVLKPNPENFQELYLGSL FT KAIGIDPLVHDIRFVEDNWESPTLGAWGLGWEIWLNGMEVTQFTYFQQVGGIECYPVTG FT EITYGLERLAMYLQGVDSVYDLVWTDGPFGKVTYGDVFHQNEVEQSTFNFEHANVPKLF FT ELFDFYESEANRLIALELPLPTYEMVLKASHTFNLLDARRAISVTERQRYILRVRTLAR FT AVAQSYLQARARLGFPMATPELRDEVLAKLKEAE*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: amino acid metabolic process [goid FT GO:0006520] [evidence ISS]; FT GO_process: cellular protein metabolic process [goid FT GO:0044267] [evidence ISS]; FT GO_component: glycine-tRNA ligase complex [goid FT GO:0009345] [evidence IEA]; FT " FT gene 13540..14091 FT /locus_tag="PA0010" FT /name="tag" FT CDS 13540..14091 FT /db_xref="GI:15595208" FT /function="DNA replication, recombination, modification FT and repair" FT /protein_id="NP_248700" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="DNA-3-methyladenine glycosidase I" FT /translation="MPRCFWCNDDPLYMAYHDEEWGVPQRDPDALFELLLLEGFQAGLS FT WITVLKKRERYREVLFGFDVQRVAQMSDAEIDELMLDPGIIRNRAKLNAARQNAQAWLE FT LDDPAGFLWSFVGGQPKINHFAGRAEVPAITPEAEAMSKALRKAGFNFVGPTICYAFMQ FT ASGMVMDHTQDCDRYAQLVG*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: DNA metabolic process [goid GO:0006259] FT [evidence ISS]; FT GO_function: DNA-3-methyladenine glycosylase I activity FT [goid GO:0008725] [evidence IEA]; FT " FT gene 14235..15122 FT /locus_tag="PA0011" FT CDS 14235..15122 FT /db_xref="GI:15595209" FT /function="Cell wall / LPS / capsule; Antibiotic FT resistance and susceptibility; Adaptation, Protection" FT /protein_id="NP_248701" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 2 (primary); Cytoplasmic Membrane, Class 3 (primary)" FT /product="2-OH-lauroyltransferase" FT /translation="VEKFKGALVVGALRLFALLPWRAVQGVGAGIGWLMWKLPNRSREV FT VRINLSKCFPELSETELEKLVGQSLMDIGRTLTESACAWIWPPEKSLRYIREVEGMEVL FT EEALASGDGLVGITSHLGNWEVLNHFYCSYAKPIIFYRPPKLKAVDELLKKQRVQLGNR FT VAPSTPEGILSVIKEVKKGGCVGIPADPEPARTAGLFVPYLGTTALISKFVPQLLSRGK FT ARGVFFHAVRLPDGSGYKVILEAAPADMYDKDLEVSVAAMSRELAKYVRAYPSQYMWSM FT KRFKNRPDGEKKWY*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: lipid A biosynthetic process [goid FT GO:0009245] [evidence IEA]; FT GO_function: lauroyltransferase activity [goid GO:0008913] FT [evidence ISS]; FT " FT gene 15207..15473 FT /locus_tag="PA0012" FT CDS 15207..15473 FT /db_xref="GI:15595210" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248702" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MDNQRQYPRTPLKCRIRISHPLFGELMAQTRDLSDTGVYVKHPDL FT TQLPTGSVVTGQVQDLPIDAPILQMEVVRVDAEGVGLRFLSEA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 15620..16273 FT /locus_tag="PA0013" FT /gene_synonym="yhhQ" FT CDS 15620..16273 FT /db_xref="GI:15595211" FT /function="Membrane proteins" FT /protein_id="NP_248703" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="conserved hypothetical protein" FT /translation="MSASSPAAWRGTLAGLIAFHIFIIIASNYLVQLPITLFGWHTTWG FT AFSFPFIFLATDLTVRLLGKGPARLVIARVMIPALIASYVVSVLFQEAAFRGFSALLEF FT NTFVARISLASFLAYVLGQILDIQVFDRLRRSRHWWTAPVASTILGNLLDTFTFFFVAF FT WRSDNPFMAQHWVEIATVDYGVKLSISLLLFVPLYGMLLNGILKMLPGRPQSNA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(16335..16607) FT /locus_tag="PA0014" FT CDS complement(16335..16607) FT /db_xref="GI:15595212" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248704" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MSKQERSVPSYVEYPYEQAILYVHRNASANEMLESVQERLRALLG FT LLHALERIEVRTGLGVPIQRVAHILVTLGGDALTLLTAAHRATTS*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(16900..17217) FT /locus_tag="PA0015" FT CDS complement(16900..17217) FT /db_xref="GI:15595213" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248705" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MMIEGLEKMLAKGVDNALLRFGLGKGYLDAGDAERAAEHLQRCVE FT QDPKYSAGWKLLGKARQAAGDLAGARQAWEQGLATAATHGDKQAEKEMTVFLRKLDRAR FT T*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(17366..18739) FT /locus_tag="PA0016" FT /name="trkA" FT CDS complement(17366..18739) FT /db_xref="GI:15595214" FT /function="Transport of small molecules" FT /protein_id="NP_248706" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="potassium uptake protein TrkA" FT /translation="MKIIILGAGQVGGTLAEHLASEANDITVVDTDGDRLRDLGDRLDI FT RTVQGKASFPTVLRQAGADDADMLVAVTNSDETNMVACQVAYTLFNTPTKIARVREPAY FT LTRTGLFDNEAIPVDVLISPEQVVTNYIKRLIEHPGALQVIDFAEGKAQLVGIKAYYGG FT PLVGQELRQLREHMPNVDTRVAAIYRRNRPIIPQGDTVIEADDEVFFIAAKAHIRAVMG FT EMRRLDDSYKRIIIAGGGNVGERLAEAIESRYQVKIIERSPLRCRHLSDTLDSTIVLNG FT SASDRDLLLEENIGETDVFLALTNDDEANIMSSLLAKRLGASKVMTLINNPAYVDLVQG FT GEIDIAISPQLATIGTLLAHVRRGDIESVHSLRRGAAEAIEVVAHGDAKSSKVIGRSIN FT EIKLPPGTTIGALVRDEEVLIAHGDTRIESGDHVLLFLVDKKYIRDVERLFQAGLTFF* FT " FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: transport [goid GO:0006810] [evidence FT ISS]; FT GO_process: potassium ion transport [goid GO:0006813] FT [evidence RCA]; FT GO_function: potassium ion transmembrane transporter FT activity [goid GO:0015079] [evidence RCA]; FT GO_function: glutamyl-tRNA reductase activity [goid FT GO:0008883] [evidence IEA]; FT " FT gene complement(18767..20071) FT /locus_tag="PA0017" FT /gene_synonym="sun; fmu" FT CDS complement(18767..20071) FT /db_xref="GI:15595215" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248707" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="conserved hypothetical protein" FT /translation="MNPRLAACQALAAVLAGRASLSGALPPQLDKVAPRDRGLTQELAF FT GAARWQPRLQALAARLLQKPFKAADTDIHALLLIGLYQLLYTRIPPHAAIGETVGCADK FT LKKGWAKGVLNAVLRRAQREGETLLAEVDRDPSARLGHPRWLLKALKQAWPEQLDALCA FT ANNAHPPMTLRVNRRHGERDAYLAELAEAGIKARACDYSRDGIQLAAPRDVRELPGFAE FT GRVSVQDEAAQLAAEQLESAPGQRVLDACCAPGGKTCHLLETQPELAEVVAVDLEESRL FT VRVRENLQRLGLQASLVAADARATGEWWDGKPFQRILLDAPCSATGVIRRHPDIKLARK FT PEDIAALAHLQGELLDALWPTLEVGGVLLYATCSVMPAENSDSIAAFLARTPGARELDL FT PGPWGMKQPHGRQLLPQVEGHDGFYYAKLIKISAR*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_function: rRNA (cytosine) methyltransferase FT activity [goid GO:0016434] [evidence IEA]; FT " FT gene complement(20068..21012) FT /locus_tag="PA0018" FT /name="fmt" FT CDS complement(20068..21012) FT /db_xref="GI:15595216" FT /function="Amino acid biosynthesis and metabolism; FT Translation, post-translational modification, degradation" FT /protein_id="NP_248708" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="methionyl-tRNA formyltransferase" FT /translation="MSQALRIVFAGTPEFAAEHLKALLDTPHRIVAVYTQPDRPAGRGQ FT KLMPSAVKSLALEHGLPVMQPQSLRNAEAQAELAALRADLMVVVAYGLILPQAVLDIPR FT LGCINSHASLLPRWRGAAPIQRAVEAGDAESGVTVMQMEAGLDTGPMLLKVSTPISAAD FT TGGSLHDRLAALGPKAVIEAIAGLAAGTLHGEIQDDALATYAHKLNKDEARLDWSRPAV FT ELERQVRAFTPWPVCHTSLADAPLKVLGASLGQGSGAPGTILEASRDGLLVACGEGALR FT LTRLQLPGGKPLAFADLYNSRREQFAAGQVLGQ*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: amino acid metabolic process [goid FT GO:0006520] [evidence ISS]; FT GO_process: cellular protein metabolic process [goid FT GO:0044267] [evidence ISS]; FT GO_process: methionyl-tRNA aminoacylation [goid FT GO:0006431] [evidence IEA]; FT " FT gene complement(21067..21573) FT /locus_tag="PA0019" FT /name="def" FT CDS complement(21067..21573) FT /function="Translation, post-translational modification, FT degradation" FT /product_synonym="formylmethionine deformylase" FT /protein_id="NP_248709" FT /note="GO_process: cellular protein metabolic process FT [goid GO:0044267] [evidence ISS]; FT GO_function: formylmethionine deformylase activity [goid FT GO:0008463] [evidence RCA]; FT GO_function: peptide deformylase activity [goid FT GO:0042586] [evidence IEA]; FT " FT /db_xref="GI:15595217" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="polypeptide deformylase" FT /translation="MAILNILEFPDPRLRTIAKPVEVVDDAVRQLIDDMFETMYEAPGI FT GLAATQVNVHKRIVVMDLSEDKSEPRVFINPEFEPLTEDMDQYQEGCLSVPGFYENVDR FT PQKVRIKALDRDGNPFEEVAEGLLAVCIQHECDHLNGKLFVDYLSTLKRDRIRKKLEKQ FT HRQQA*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene 21712..22737 FT /locus_tag="PA0020" FT CDS 21712..22737 FT /db_xref="GI:15595218" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248710" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGK FT FLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYVDGQPRLVLNRGESRGTIKLSPKIR FT STPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYARGK FT FADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRL FT GDRLFPTEERAVNSTFMPGEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGN FT VLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKLSYALVLMASRPLSVTDRVQN FT P*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_process: asexual sporulation [goid GO:0030436] FT [evidence IEA]; FT " FT gene 22872..23960 FT /locus_tag="PA0021" FT /gene_synonym="smf" FT CDS 22872..23960 FT /db_xref="GI:15595219" FT /function="Membrane proteins" FT /protein_id="NP_248711" FT /localization_and_confidence="Unknown, Class 3 (primary); FT Unknown (This protein may have multiple localization FT sites), Class 3 (primary)" FT /product="conserved hypothetical protein" FT /translation="MKNHSPAELEARLRLHGLPELGPMRFLRLIEAFGSASSALAAPAS FT AWRTLGVPAEAAAARRSPAVREAAGEALRWLEGLRRHLLMWDDPGYPALLAEVADAPPL FT LYVEGAPETLERPQLAMVGSRRASPAGLGTARSFARSLAQGGFAITSGLALGIDGAAHE FT GALEAGGATVAVLGTGLRRLYPRRHEALARRIVEGGGALVSELPLDSPPLPANFPRRNR FT IISGLSLGVLVVEASPASGSLITARLAAEQGREVYAIPGSIHHPGARGCHQLIRDGALL FT VESVGHVLEALRGWAQAEPAEAPAQPLPHPLLALLRAAPYTSEGLAAASGMTLPDVLAT FT LSELELDGRVACEAGTWVHRSG*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_process: DNA mediated transformation [goid FT GO:0009294] [evidence IEA]; FT " FT gene 24001..24558 FT /locus_tag="PA0022" FT /gene_synonym="yrdC" FT CDS 24001..24558 FT /db_xref="GI:15595220" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248712" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="conserved hypothetical protein" FT /translation="MISSFRAQCAARVVREGGVIAYPTEAVWGLGCDPWNEDAVYRLLA FT LKARPVEKGLIVVAANIHQLDFLLEDLPDVWLDRLAGTWPGPNTWLVPHQERLPEWVTG FT VHDSVAVRVTDHPLVQELCHLTGPLISTSANPAGRPAARTRLRVEQYFHDELDAILGGA FT LGGRRNPSLIRDLVTGQVIRPA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(24568..25545) FT /locus_tag="PA0023" FT /name="qor" FT CDS complement(24568..25545) FT /function="Energy metabolism" FT /product_synonym="NADPH:quinone reductase" FT /protein_id="NP_248713" FT /note="GO_function: L-lactate dehydrogenase activity [goid FT GO:0004459] [evidence ISS]; FT GO_process: generation of precursor metabolites and energy FT [goid GO:0006091] [evidence ISS]; FT GO_function: NADPH:quinone reductase activity [goid FT GO:0003960] [evidence RCA]; FT GO_function: oxidoreductase activity, acting on NADH or FT NADPH, quinone or similar compound as acceptor [goid FT GO:0016655] [evidence IEA]; FT " FT /db_xref="GI:15595221" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="quinone oxidoreductase" FT /translation="MAKRIQFAAYGGPEVLEYRDYQPAEPGPREVRVRNRAIGLNFIDT FT YYRSGLYPAPGLPSGLGSEGAGEVEAVGSEVTRFKVGDRVAYATGPLGAYSELHVLAEE FT KLVHLPDGIDFEQAAAVMLKGLTTQYLLRQTYELRGGETILFHAAAGGVGLFACQWAKA FT LGVQLIGTVSSPEKARLARQHGAWETIDYSHENVARRVLELTDGKKCPVVYDSVGKDTW FT ETSLDCVAPRGLLVSFGNASGPVTGVNLGILSQKGSLYVTRPTLGSYADTPEKLQAMAD FT ELFGLIERGDIRIEINQRFALAEAARAHTELAARRTTGSTVLLP*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene 25736..26653 FT /locus_tag="PA0024" FT /name="hemF" FT CDS 25736..26653 FT /db_xref="GI:15595222" FT /function="Biosynthesis of cofactors, prosthetic groups FT and carriers" FT /protein_id="NP_248714" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="coproporphyrinogen III oxidase, aerobic" FT /translation="VTDRIAAVKTYLLDLQDRICAALEAEDGKARFAEDAWERPAGGGG FT RTRVIGDGALIEKGGVNFSHVFGDSLPPSASAHRPELAGRGFQALGVSLVIHPENPHVP FT TSHANVRFFCAEKEGEEPVWWFGGGFDLTPYYAHEEDCVHWHRVARDACAPFGADVYPR FT YKEWCDRYFHLKHRNEPRGIGGLFFDDLNQWDFDTCFAFIRAIGDAYIDAYLPIVQRRK FT HTPFDERQREFQAYRRGRYVEFNLVFDRGTLFGLQSGGRTESILMSLPPQVRWGYDWKP FT EPGSEEARLTEYFLADRDWLAGQP*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_function: anthranilate synthase activity [goid FT GO:0004049] [evidence IDA]; FT GO_process: cofactor biosynthetic process [goid FT GO:0051188] [evidence ISS]; FT GO_process: chlorophyll metabolic process [goid FT GO:0015994] [evidence ISS]; FT " FT gene 26711..27535 FT /locus_tag="PA0025" FT /name="aroE" FT CDS 26711..27535 FT /db_xref="GI:15595223" FT /function="Amino acid biosynthesis and metabolism" FT /protein_id="NP_248715" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="shikimate dehydrogenase" FT /translation="MDRYCVFGNPIGHSKSPLIHRLFAEQTGEALVYDAQLAPLDDFPG FT FARRFFEQGKGANVTVPFKEEAYRLVDELSERATRAGAVNTLIRLADGRLRGDNTDGAG FT LLRDLTANAGVELRGKRVLLLGAGGAVRGVLEPFLGECPAELLIANRTARKAVDLAERF FT ADLGAVHGCGFAEVEGPFDLIVNGTSASLAGDVPPLAQSVIEPGRTVCYDMMYAKEPTA FT FNRWAAERGAARTLDGLGMLVEQAAEAFFLWRGVRPASAPVLETLRRQLATV*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_function: 4-hydroxyphenylacetate 3-monooxygenase FT activity [goid GO:0018660] [evidence IDA]; FT GO_process: amino acid metabolic process [goid GO:0006520] FT [evidence ISS]; FT GO_process: L-phenylalanine biosynthetic process [goid FT GO:0009094] [evidence ISS]; FT GO_process: tyrosine biosynthetic process [goid FT GO:0006571] [evidence ISS]; FT GO_process: tryptophan biosynthetic process [goid FT GO:0000162] [evidence ISS]; FT GO_process: chorismate biosynthetic process [goid FT GO:0009423] [evidence IEA]; FT " FT gene 27646..28632 FT /locus_tag="PA0026" FT /name="plcB" FT CDS 27646..28632 FT /db_xref="GI:15595224" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248716" FT /localization_and_confidence="Extracellular, Class 1 FT (primary); Unknown, Class 3 (primary)" FT /product="phospholipase C, PlcB" FT /translation="MKTFARLAAGLCICAIASQANAWSQPTHKNIVKDALAFMNSSYAT FT EEMRQAYRFYVSAAGSEAQAGEILGQAAFDVDDFKDTRLGGWWVGYEHAPLWGAASGIV FT NYTSYWHFLNLARDGDSHGNPHGGYDYRYHKVDGGIADVDWYAMVYLYNRELKREDFDT FT TEAHYRQGTRSDWQEHYGDFQTAAFQPIDNLATYWFEQFRAAPSLQTIGYALHATGDVA FT QPHHVWITSANGHSSWEGWVDDHYASEKLNDPAAVANLVGRYDPSKSIRDLLTQTGQVA FT YARPEPLYDTSYETRLRVAKELIPESIALTVTVLTKGANSFDAPTAL*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT /note="GO_function: molecular_function [goid GO:0003674] FT [evidence IDA]; FT GO_component: cellular_component [goid GO:0005575] FT [evidence IDA]; FT GO_process: biological_process [goid GO:0008150] [evidence FT IDA]; FT " FT gene 28613..29899 FT /locus_tag="PA0027" FT CDS 28613..29899 FT /db_xref="GI:15595225" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248717" FT /localization_and_confidence="Unknown, Class 3 (primary); FT Unknown (This protein may have multiple localization FT sites), Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MHRLLSDRARGWRRALCGIVLGLLAWSAHGVPAKAPQDLRIDGEV FT LPGRSIDLLEQALSRVKFNTDPQQLRRGLVENRLLARAVEDQLTAQSRADLDASVEIEA FT GNLLEQVYGRRYREDLGPYLRQPRALSAERLREVLAPRSRGLVENSLLLDETQRREAAG FT VELIGWQFPGQPAQVLDLLSLYEGDNVQGQVELQQGNLAYLARQVQTRIRRDYLWYRLA FT RDGFGPAERQGVRTLVRDKLVRHRYLHQIGLYSDFHHESDALRELAGKVSDKDAEAYYR FT RNLERYRNVAQVQAAHIRLADQASADKVYAELRGGLAFDEAVRRYSLADDRDRDPPGDL FT GLIRPQDGRLDLLRKTALIQKADTVSQPMRIDGAFEIVRVRSREDRQLPLDDRSVRFEV FT NQAVAREQLAAQFETRLRNLLAGARVEGL*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 29896..30498 FT /locus_tag="PA0028" FT CDS 29896..30498 FT /db_xref="GI:15595226" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248718" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="VKRWLGVALGCSGLAIALACAGVLLAPADMAASSSSPSPARTVAA FT LPAVDDRPPPPAPVRSQAAAPAYEAEPPVAELDREQAIQFMQMLRDEGDPRSPPLGGLQ FT PRQGATAQELADPKQYQAFEERQTRELVQAYTSGVQQIPEIRARIEAAEQGGERSAEEI FT DEARAALGQLEMMRDKLQRESPQLLPGDSAPTSPAAP*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(30502..32055) FT /locus_tag="PA0029" FT CDS complement(30502..32055) FT /db_xref="GI:15595227" FT /function="Membrane proteins; Transport of small FT molecules" FT /protein_id="NP_248719" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="probable sulfate transporter" FT /translation="MWTRLLPFLAWLPGLHRGMLGREAWVGLNGAILALPQSMAYALIA FT GLPAEYGLYAAMLPVAIACLWGSSRYLVSGPTAAISVLLFSSVAPLAPLGSPQYVQAVL FT LLTFLAGAFQWLLGVLRVGSLVNFVSHSVMLGFTLGAALLIVLGQLPYLLGLAASGEGA FT APGNGWRLLARFAEFDGPSLLVGGFSFALSLLVRRLRPRWPALLLGLLGGATLVWALPG FT TFASVAHVQALSSALPGWSPLVFDSRSILDLLPAAVACGMLGLVTSLSIARALAARQGD FT AFDANQEVRAQGLSNLLGPWLSASLSAGSFTRSGLNLEAGARSPLAGAFSALWVALLAV FT LGARLIEHVPLPAMAAGILLIAWGLIDRPALRALYRSGRAECLVAGLTALATLLLPLQN FT AIYAGVLASLVFYLRRTSTPRVLRQRNDEEEVLRIEGSIFFGACDYLQRLMRQCDRPRL FT VLDARQVNFIDFAGAVLLQQEARRLHAEGRRLVLRHARPQVREALGRQADEGCRLHYEG FT *" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_component: membrane [goid GO:0016020] [evidence FT IEA]; FT " FT gene complement(32060..32983) FT /locus_tag="PA0030" FT CDS complement(32060..32983) FT /db_xref="GI:15595228" FT /function="Transport of small molecules" FT /protein_id="NP_248720" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MNRLPTCLLAATLFLGSASLYAEDPACARVRLADPGWSDIAVTNA FT TAAFLLESLGYQVKIDTLSVPIIYGGLRDGQVDAFLGGWMPAHQDYHDKFVASGQVERL FT GRNLDGTRFTLAVPRYVWDAGVHRFEDLAAQGQRFNRKLYGIGSGAPANQSIQKMIDAN FT QFGLGDWKLVESSEQAMLAELGRAEKRQRWLVFLGWTPHPMNIRHDLRYLEGGEQYFGD FT RGQVYTLARKGYAAQCPNPARLLANLRFDLDMENRLMSDALEGTATPASATRAWLKANP FT RVLEAWLQGVTSRDGGDALAAVRGQP*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_component: ATP-binding cassette (ABC) FT transporter complex, substrate-binding subunit-containing FT [goid GO:0055052] [evidence IEA]; FT " FT gene complement(33000..34511) FT /locus_tag="PA0031" FT /name="betC" FT CDS complement(33000..34511) FT /db_xref="GI:15595229" FT /function="Adaptation, Protection" FT /protein_id="NP_248721" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="choline sulfatase" FT /translation="MKTSPNILFIMADQMAAPLLPLHDPRSVLRMPHLSRLAERAVVFD FT SAYCNSPLCAPSRFTLVSGRLPTRIGAWDNAADFAADTPTYAHYLRNLGYRTALSGKMH FT FCGPDQLHGYEERLTSDIYPADYGWAVNWDEPEVRPSWYHNMSSVLQAGPCVRTNQLDF FT DEEVVFKARQYLYDHVRQHAGQPFCLTVSMTHPHDPYSIPASYWNLYRDEDIPLPRQRF FT AQEEQDPHSQRLLKVIDLWDKPLPEERIRAARRAYFGACSYVDAQIGALLATLEKCGLA FT DDTIVVFSGDHGDMLGERGLWYKMHWFEMAARVPLLVHAPARFAPRRIGASVSTVDLLP FT TLVELAGGQVDPRLPLEGRSLLPHLRDGSGHDEVIGEYTAEGTLSPLMMIRRGDYKFIY FT SEQDPCLLYDLRNDPQERENLAASPAHRGTFEAFLDEARRRWDIPAITRAVLDSQRRRR FT LVAAALARGRLASWDHQPWVDASQQYMRNHIDLDDLERRARFPQP*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: response to stimulus [goid GO:0050896] FT [evidence ISS]; FT GO_function: sulfuric ester hydrolase activity [goid FT GO:0008484] [evidence RCA]; FT GO_process: metabolic process [goid GO:0008152] [evidence FT RCA]; FT " FT gene 34624..35538 FT /locus_tag="PA0032" FT CDS 34624..35538 FT /db_xref="GI:15595230" FT /function="Transcriptional regulators" FT /protein_id="NP_248722" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable transcriptional regulator" FT /translation="MGERLMPLSLDLLRVFESAARQLSFTAAAEELGTTQPAVSQQIKR FT LEKELATPLFQRVHRGIVLTDAGQLLLRHVAAGLETIDAGIAALGARQRHEVLQVATDY FT AFAAYWLMPRLPRFHQAHPHLDVSLVTSERGLAGQRGDIDVAILFGDGRSKHGEAHRLF FT REEVFPVCSPRLVEGLQLPLAKAHLARLPMLHLKPAQHARWFDWPALFEALAIDRQPIP FT AVLSFDNYTLLIQAAIAGQGVAIGWRHLVDGLLEQGLLCRPIGESCLSRYGYYAVLPER FT KRRQRLVDGFVDWLQAELQAGGA*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT CDS complement(35905..36270) FT /db_xref="GI:15595231" FT /function="Two-component regulatory systems" FT /protein_id="NP_248723" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="Histidine phosphotransfer protein HptC" FT /translation="MRTFDLTAALGDRANQPEISRLLVAQLMTSNNEDTRKLRRAQERE FT QTQELNELAHRLAGMASLIHAHAVERACHQLEIACGESSVRKLADAVDDLVTALGELQC FT ELHDWMTMTAPQGTAKS*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_component: membrane [goid GO:0016020] [evidence FT IEA]; FT GO_function: histidine phosphotransfer kinase activity FT [goid GO:0009927] [evidence ISS]; FT " FT gene complement(35905..36270) FT /locus_tag="PA0033" FT /name="hptC" FT gene complement(36278..36901) FT /locus_tag="PA0034" FT CDS complement(36278..36901) FT /db_xref="GI:15595232" FT /function="Transcriptional regulators; Two-component FT regulatory systems" FT /protein_id="NP_248724" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable two-component response regulator" FT /translation="MSKVLIVDDHPAIRLAVRLLFERDGFTIVGEADNGAEALQVARKK FT SPDLAILDIGIPKIDGLEVIARLKSLKLDTKVLVLTRQNPAQFAPRCLQAGAMGFVSKR FT ENLSELLLAAKAVLAGYIHFPTGALRSINQQSRDNEARMLESLSDREMTVLQYLANGNT FT NKAIAQQLFLSEKTVSTYKSRIMLKLNAHSLAGLIDFARRHELI*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_process: regulation of sporulation resulting in FT formation of a cellular spore [goid GO:0042173] [evidence FT IEA]; FT " FT gene complement(37087..37893) FT /locus_tag="PA0035" FT /name="trpA" FT CDS complement(37087..37893) FT /db_xref="GI:15595233" FT /function="Amino acid biosynthesis and metabolism" FT /protein_id="NP_248725" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="tryptophan synthase alpha chain" FT /translation="MSRLQTRFAQLKQENRAALVTFVTAGDPDYASSLEILKGLPAAGA FT DVIELGMPFTDPMADGPAIQLANIRALDGGQTLARTLQMVREFRSGDSETPLVLMGYFN FT PIHHYGVERFIAEAKEVGVDGLIVVDLPPEHNEDLCHPAQAAGIDFIRLTTPTTGDQRL FT PTVLEGSSGFVYYVSVAGVTGANAATLEHVEEAVARLRRHTDLPIGIGFGIRSAEHAAA FT VARLADGVVVGSALIDRIAKARDNAQAVKDVLALCGELAEGVRNAR*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT /note="GO_function: 3-deoxy-7-phosphoheptulonate synthase FT activity [goid GO:0003849] [evidence ISS]; FT GO_process: amino acid metabolic process [goid GO:0006520] FT [evidence IDA]; FT GO_process: L-phenylalanine biosynthetic process [goid FT GO:0009094] [evidence IDA]; FT GO_process: tyrosine biosynthetic process [goid FT GO:0006571] [evidence IDA]; FT GO_function: tryptophan synthase activity [goid FT GO:0004834] [evidence IEA]; FT " FT gene complement(37890..39098) FT /locus_tag="PA0036" FT /name="trpB" FT CDS complement(37890..39098) FT /db_xref="GI:15595234" FT /function="Amino acid biosynthesis and metabolism" FT /protein_id="NP_248726" FT /localization_and_confidence="Cytoplasmic, Class 1 FT (primary); Periplasmic, Class 1 (primary); Cytoplasmic, FT Class 3 (primary)" FT /product="tryptophan synthase beta chain" FT /translation="MTSYRNGPDAKGLFGRFGGQYVAETLMPLILDLAREYEKAKDDPA FT FQEELAYFQRDYVGRPSPLYFAERLTEHCGGAKIYLKREELNHTGAHKINNCIGQILLA FT RRMGKKRIIAETGAGMHGVATATVAARFGLQCVIYMGTTDIDRQQANVFRMKLLGAEVI FT PVTAGTGTLKDAMNEALRDWVTNVDSTFYLIGTVAGPHPYPAMVRDFQAVIGKETREQL FT AEKEGRLPDSLVACIGGGSNAMGLFHPFLDDAGVQIVGVEAAGHGIDTGKHAASLNGGV FT PGVLHGNRTFLLQDADGQIIDAHSISAGLDYPGIGPEHAWLHDTGRVEYTSITDDEALE FT AFHTCCRLEGIIPALESSHALAEVFKRAPSLPKEHIMVVNLSGRGDKDMQTVMHHMQQE FT SKA*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT /note="GO_function: oxo-acid-lyase activity [goid FT GO:0016833] [evidence ISS]; FT GO_process: amino acid metabolic process [goid GO:0006520] FT [evidence IDA]; FT GO_process: L-phenylalanine biosynthetic process [goid FT GO:0009094] [evidence IDA]; FT GO_process: tyrosine biosynthetic process [goid FT GO:0006571] [evidence IDA]; FT GO_function: tryptophan synthase activity [goid FT GO:0004834] [evidence IEA]; FT " FT gene 39202..40089 FT /locus_tag="PA0037" FT /name="trpI" FT CDS 39202..40089 FT /db_xref="GI:15595235" FT /function="Amino acid biosynthesis and metabolism; FT Transcriptional regulators" FT /protein_id="NP_248727" FT /localization_and_confidence="Cytoplasmic, Class 2 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="transcriptional regulator TrpI" FT /translation="MSRDLPSLNALRAFEAAARLHSISLAAEELHVTHGAVSRQVRLLE FT DDLGVALFGKDGRGVKLTDSGVRLRDACGDAFERLRGVCAELRRQTAEAPFVLGVPGSL FT LARWFIPRLDQLNRALPDLRLQLSTSEGEFDPRRPGLDAMLWFAEPPWPADMQVFELAP FT ERMGPVVSPRLAQETGLAQAPAARLLQEPLLHTASRPQAWPAWAASQGLAAEALRYGQG FT FEHLYYLLEAAVAGLGVAIAPEPLVRDDLAAGRLAAPWGFIETDARLALWVPARLHDPR FT AGRLAQWLREQLAG*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT /note="GO_process: amino acid metabolic process [goid FT GO:0006520] [evidence IDA]; FT GO_process: regulation of transcription, DNA-dependent FT [goid GO:0006355] [evidence IDA]; FT GO_function: transcription regulator activity [goid FT GO:0030528] [evidence IDA]; FT " FT gene 40190..40405 FT /locus_tag="PA0038" FT CDS 40190..40405 FT /db_xref="GI:15595236" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248728" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MSNHHTYKKIELVGSSKTSIEDAINNALAEAAKSIQHLEWFEVVD FT TRGHIENGAVGHYQVTLKVGFRIANS*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 40589..40816 FT /locus_tag="PA0039" FT CDS 40589..40816 FT /db_xref="GI:15595237" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248729" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="VFMKKLMLAVGLFAVAGSAFAAKPCEELKAEIDAKIKANGVPAYT FT LEIVDKGSVTDKKVVGTCDGGTKEIVYQRG*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 41113..42801 FT /locus_tag="PA0040" FT CDS 41113..42801 FT /db_xref="GI:15595238" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248730" FT /localization_and_confidence="Outer Membrane, Class 3 FT (primary)" FT /product="conserved hypothetical protein" FT /translation="VALHRLAFIFLCLPLMASAAPFTSPGDRDLIRDRQQRLLDEQRKR FT LEELQQLPGKGAPAAADASGGDERCFEIRRIELEGAGHLGESARRQLLAPYQGRCLGVG FT QLNALLKAVTDHYLDRGYVTTRAYLPQQDLASGTLRIIVVEGRLEGLDSSALASPRELT FT MSFPGRTGELLDLRELEQLVDQLSRLPSRQAQLELVPGSEVGGSRVRLKGERDKPWRVS FT ATRNNDGDVSTGEQQMGLGLDWDSPLGLADQLNLRANRDAVTDRWRHSDSQSLFYSLPW FT GWWTFTYGYSQSDYRTRNEASGFPFKLDGDSRSHQFRAERVLHRDGVSKTAMSLGLSHQ FT RTNNYVEDTRLEDQSTRITETQLGFNHGRRIGSGFVNLDLGWQQGIGALGAQGRGHPQA FT GDPNARYDKYSLTLSYLQPFQLWGERFSFDSLATGQRSEDVLFSPQRISLGGNSSVRGF FT KDQTLTGDSGGYWRNQLRWRRAVEWAPLRPWLQEYGVAFAYDVGVIRHDRYNDGASGRM FT SGNAIELDARGRYFAASVGFARSLERPSAIERREHPIYFRVDAFF*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 42914..53521 FT /locus_tag="PA0041" FT CDS 42914..53521 FT /db_xref="GI:15595239" FT /function="Secreted Factors (toxins, enzymes, alginate)" FT /protein_id="NP_248731" FT /localization_and_confidence="Extracellular, Class 1 FT (primary); Outer Membrane, Class 3 (primary)" FT /product="probable hemagglutinin" FT /translation="MDIRSPLNQCIALSLAGILFLNPIVAAAAGLALDKAAGGNTGLGQ FT AGNGVPIVNIATPNDAGLSNNHFRDYNVGANGLILNNATGKTQGTQLGGIILGNPNLKG FT QAAQVILNQVTGGNRSTLAGYTEVAGQSARVIVANPHGITCQGCGFINTPRATLTTGKP FT IMDGQRLERFQVDGGDIVVEGAELNVGNLEQFDLITRSAKLNAKLYAKNLNIVTGRNDV FT QADSLQATPRAADGSEKPQLAIDSSALGGMYAGAIRLVGTEQGVGVRLAGDMAASGGDI FT RIDASGKLSLAQASSQGDLKIAAQAVELNGKTYAGGSAEIRSAEELVNRQSLAARERIV FT LEAAHIDNAGVIEAGVEPDERRNARGDLELRSGTLRNAGSLVASRALEAKASQALDNQG FT GSLKGATVRVDAGHLDNRGGKLLAEGELRVEASSLDNRQDGLLQSRDRAVVKTRGDLDN FT RGGQVIGLNDLEVGAATLDNGQQGLLGSQQSTRVSAQALVNRGDGEVSGKRVEARVGSL FT DNRGGKLIGDDLLVVASGAIDNRLGLFSAANRLDLRARSLDNSGKGTLSSRGGLEVSLG FT GLLDNRDEGNLLSQGAQRVTVGQLDNRAGGLLSSRSELNVHGASLDNRGGVLVADAGLS FT ATGGAFDNRDGGSASGKAGVRVEVASLRNDQGGKLLSDGRLDLAANAVGNAGGRIAAKG FT DLQATLGSLAQQGGELVSEKTLKVAADTLDNSQSGLIAANGGIAIEARQVDNRAGEISS FT TSKVAVNAREQLDNRGGKVIGDSGLRLTVQRLLNQAKGVLAGRDGLSLDGGELFNGDGG FT RLDSQNSLSVSLGGVLDNQGGALVSEGSLTARAARLDNRGGTFSSAGALALTSQAALDN FT QGGRLLSDAGVTLQGASLDNSRSGVISAKGAVDIRTGVLDNSRNGGIGSNAGITLVAAR FT LDNGQQGRVSAKGLLDANLKGLDQRGGGVLISETGVTLDLNGGTLVNRDGGLIATPGAL FT LLRQLGAVDNGAGGEISSDRAFTLAAASLDNRGGRLIGAANLTLRIAQALDNSLAGVIS FT GAAGLDIAAARLDNSAKGTLASRAGIDLRVDGALDNHAEGTVSGARLTLASASLDNSGK FT GLLSGNAGLSVATGALDNAEGGQLISQGVLDVSSADLDNRGGALSGKQSLRLSAANLDN FT RGGLLTSDGELELTAGRVDSADGGEISARGDLRLTVERLVQRQGRLVGERGVSLDLRGG FT DLDNQGGLISARGPLSIERLSVLDNRQGGEISSQQGFELLARRIDNGQQGRIISAGKLR FT LDADALGNAGAGLLSGWQGLTVTGGSLDNSAGGTLSSKDGELAISLGGALDNHGQGALV FT SKGAQRIDAASLDNAQGIVSGESDVTLSIAGKLDNGQGGLVSAQRALSFERDDTLLNNA FT GGRINGGSLLLKGASLDNSDGQLISQGRLDAILGGALVNTGAARLASGGDLLLRSASVD FT NRGGKLVSQGLLEISAGSLDNSASGTLASQAGMSLRLGGGALRNQQDGLIFSQAGALDV FT QAGSLDNRQGTLQAQGDNRLRIGGALDNQGGRLDSRAGNLDLQSGSLDNGAGGVLNSAK FT GWLKLVTGLFDNSAGVTQAQSLEIRAGQGVRNQQGHLSALGGDNRIVTADFDNQGGGLY FT ASGLLSLDGQRFLNQGAAAGQGGKVGAGRIDFSLAGALANRFGQLESESELHLRAAAID FT NSGGSLRALGRSGSTRLVAGGLNNAYGVLESANQDLDLQLGSLANAGGRILHTGNGTFG FT LDSGQVIRAGGELTTNGLLDIRASEWTNSSVLQAGRLNLDIGTFRQTAEGKLLAVQSFT FT GRGGDWSNDGLLASDGSFRLDLSGGYRGNGRATSLGDFALNAASLDLGNAASLAGGANV FT TLGAGNLLVNRGRITAAGDLVASAASLNNYGTLGGGGNLRLNAPALLNERGLLFSGADM FT TLRAGDITNLYGDVYSLGRLDIARDDAGNRAASLRNLSGVIESGKDFSLRASLIENRRA FT VLESKSGLYTAKMEQTACIEGVNAGDCSGKRNAIWTITQRDKTEVTASSAMGQLLAGGD FT FAIDGGTLNNLSSLIGSGGNLTANLEVLDNQGLETGELETIRVLRTARGGDIGGIDQKS FT RNFTNLYWYQSANFDPARAGEIPAALNAILSDWSFEYEFPSKGPTPISSGDQSYAAVIQ FT AAGDVTVNASTRIDNGVTRPGYTFVGSGRQVGDSAVGGSGVSVVVPLTSQLPPDLARRQ FT VNPVTLPGFSLPQGDNGLFRLSSRFAEDGNGSAALGAGADRTQGGSGVSVGQQGAGNAA FT GTWQGQGVRVDGLAGAANVQGQGGSTLGGSLPGVARVQGVPGNATPSASHKYLIETNPA FT LTELKQFLNSDYLLSGLGMNPDDSKKRLGDGLYEQRLIRDAVVARTGQRYIDGLSSDEA FT LFRYLMDNAIAYKDQLHLQLGVGLSAEQMAALTHDIVWLEEVEVNGEKVLAPVVYLAQA FT EGRLAPNGALIQGRDVKLVSGGDLHNVGTLRARNDLSATADNLDNSGLIEAGKRLDLLA FT GDSIRNRQGGVIAGRDVSLTALTGDVINERSVTRYDSALDGRTWERSFADSAARVEAAN FT SLNVQAGRDIANLGGVLQSRGDLSLDAGRDVTVAAVEDRQGQTRWSTSRLQSVTQLGAE FT VSAGRDLNVSAGRDLTAVASTLEARRDIALSAGRDVTLAAAANEEHAYSKTRKVTYQED FT KVAQQGTRVDAGGDLAINAGQDLRLIASQASAGDEAYLVAGDKLELLAANDSNYYLYDK FT KKKGDFGRKETRRDEVTDVKAVGSQISSGGDLTLLSGGDQTYQGAKLESGNDLAIVSGG FT AVTFEAVKDLHQESHEKSKGDLAWNSAKGKGQTDETLRQTQIVAQGNLAIKAVEGLKID FT LKHIDQKTVSQTIDAMVQADPQLAWLKEAEQRGDVDWRMVQEVHDSWKYSNSGMGPATQ FT IAVAIAAAAIGGMAAAGALSGAGVGASSFAMGAGVGAAGSLSGTAAVSLINNKGDLGKV FT LKDSFSSDSLKQIAIASLTGGLTAEYFDGILQTKTDPLTGKVTVDLSSLSGVGRFAANQ FT AMQNATSTVLSQALGQGGSLNEALKSALYNSFAAAGFNFVGDIGQEYSLKPGDPSMVTM FT HALMGGLAAQVSGGDFATGAAAAGANEALVAKLDQAFKSLSPENREAMVTMGSQLVGVL FT AAAVRDPDVTGKALESAAWVAKNSTQYNFLNHQDVADLDNALQKCKSQGNCRQVEEEFK FT ARSDENRRRLNGCVAVGNCAEIRAEIDAGSTALNELVARQETANPGGSDSDIAYGFLMG FT RNVVDWTTAGQLHLEQTANLWWNGNPQWQKEVGAYLDQTGFNPFGIGVPAMGGAAGKVT FT AKALMNALKAGELPKGEVAPGKANLPTIGALADAEAGMPYTHPVKLAAKATGTAGKIKI FT EAGAIPDANEVRAGQGLSGLGYDVTHQTTASAKGIQGQRTADLHVDGLGSIDVYTPKNL FT DPTKIVRAIEKKSNQAGGVLVQADLPSTDMSSIAARMWGKTNAQSIKTIFFQKPDGSLV FT RFDRPAGGG*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene 56546..56941 FT /locus_tag="PA0042" FT CDS 56546..56941 FT /db_xref="GI:15595240" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248732" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MPVLALRLTALAALVISVSGCVMEAYGSRARSDAQSWIGLPIQDV FT IKRFGEPERVTGDAARQKYVWKEYENYSHDYDYTYYEQGHGNTPNSSVLNQKTGTANQS FT GYYTCIYEFFADASGRVVDATARGECR*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(57212..58594) FT /locus_tag="PA0043" FT CDS complement(57212..58594) FT /db_xref="GI:15595241" FT /function="Membrane proteins" FT /protein_id="NP_248733" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="hypothetical protein" FT /translation="MGYWRQRRALGGRRTAVRAPRGRLLLWCAQARRHPLSRRMESSMT FT LSLDLLLSLCTALAIGLLIGAERGWQERDHEDARQIAGIRTFSLAGLLGGFATLLAGEL FT GSAVWVALLLALAALAVAGYVSDVRRGGDQGMTTEIALLMTFLLGSLALTEQRLLAAAG FT GIVLTLLLSLKDKLHALLKRLTAEELSGTLKLLFISVVLLPVLPNQGYGPWAFFNPYLT FT WWMVVLIAALGFSAYLAIRLIGSRKGLLLTAVLGGLVSSTVMTLTLARLRERMPDALLA FT CALLATSALMFPRILVEIGAIHPALLKELALPFAATTLVYLGGTLFHALRGGRASQEAP FT DEPGLRNPFELLPALRFAALLSAILLLVEVGRRLFGDAGIYAVALLSGLADVDAITLSL FT ARAAQGELDPGVASRGIALAALSNSLVKAGLVVLVGGKRLALQTLPFSLAGLLVGALLI FT LL*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 58786..60159 FT /locus_tag="PA0044" FT /name="exoT" FT CDS 58786..60159 FT /db_xref="GI:15595242" FT /function="Secreted Factors (toxins, enzymes, alginate)" FT /protein_id="NP_248734" FT /localization_and_confidence="Extracellular, Class 1 FT (primary); Extracellular, Class 3 (primary); Host FT Associated, Class 3 (secondary)" FT /product="exoenzyme T" FT /translation="MHIQSSQQNPSFVAELSQAVAGRLGQVEARQVATPREAQQLAQRQ FT EAPKGEGLLSRLGAALARPFVAIIEWLGKLLGSRAHAATQAPLSRQDAPPAASLSAAEI FT KQMMLQKALPLTLGGLGKASELATLTAERLAKDHTRLASGDGALRSLATALVGIRDGSR FT IEASRTQAARLLEQSVGGIALQQWGTAGGAASQHVLSASPEQLREIAVQLHAVMDKVAL FT LRHAVESEVKGEPVDKALADGLVEHFGLEAEQYLGEHPDGPYSDAEVMALGLYTNGEYQ FT HLNRSLRQGRELDAGQALIDRGMSAAFEKSGPAEQVVKTFRGTQGRDAFEAVKEGQVGH FT DAGYLSTSRDPGVARSFAGQGTITTLFGRSGIDVSEISIEGDEQEILYDKGTDMRVLLS FT AKDGQGVTRRVLEEATLGERSGHGEGLLDALDLATGTDRSGKPQEQDLRLRMRGLDLA* FT " FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT gene 60656..61342 FT /locus_tag="PA0045" FT CDS 60656..61342 FT /db_xref="GI:15595243" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248735" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Outer Membrane Vesicle, Class 1 (secondary); FT Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MSHSAKKALLPLLAVATLAGLAGCATETSTALPVQQVESVNRPYS FT GVRSPIAVGKFDNRSSYMRGIFSDGVDRLGGQAKTILITHLQQTNRFNVLDRDNMSEIQ FT QEAAIKGQAQRLKGADYVVTGDVTEFGRKEVGDRQLFGILGRGKSQIAYAKVALNIVNI FT STSEVVYSTQGAGEYALSNREVIGFGGTASYDSTLNGKVLDLAMREAVNKLVNAVDSGA FT WKPQNQ*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 61373..61726 FT /locus_tag="PA0046" FT CDS 61373..61726 FT /db_xref="GI:15595244" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248736" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MSKTITWTAALLGSMALAGCSGPKTLYQWEGYQAQVHEYFKGESK FT EAQAQALEADLEKIRAKNGAVPPGYHAQLGLLYSSIGKDDQMVREFETEKALFPESATY FT MDFLLNNARGGAR*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 61879..62388 FT /locus_tag="PA0047" FT CDS 61879..62388 FT /db_xref="GI:15595245" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248737" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="VKATYSMLSQVTFPLAEAGYYVVPVALADETFRQNGLTSAGDVHQ FT VSPAKLREIYGADAALYVTVSDYGTRYMVISSATIVTASAKLVDLRSGTTLWTGSATAS FT SEEGNGGNNGGLVGMLITAAVKQIINSSVEDAGYPIAGMTSARLLSAGQPGGLLYGPRS FT PRYGSD*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(62403..62786) FT /locus_tag="PA0048" FT CDS complement(62403..62786) FT /db_xref="GI:15595246" FT /function="Transcriptional regulators" FT /protein_id="NP_248738" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="probable transcriptional regulator" FT /translation="MSFAQNLLRLRQQNALTQRQMAERLGITVSQLRHFETKGGHPSLV FT VLQTIAGRFAVPLDWLVCERSERQALPEDLRLQFEAIGRLRLDERRAIRALLDDLIRQY FT MAKRNAAAKPLPAACAEATETSP*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene complement(63068..64729) FT /locus_tag="PA0049" FT CDS complement(63068..64729) FT /db_xref="GI:15595247" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248739" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MRYARHASRYSLFTLAVSAALLPGAGWAANGDLAGARKPPSVACS FT WNREAALSYEERRLDTPLPFSGANVVTHDQTPLAERIVKGAGFDGFEPAFAKRLCAADG FT RTPVTSYAKALKLVTEEGRALWRAAVDRAQGRRAIPAGALPASDDRMLYWTRLYMTRTL FT RQWAPSFHLGKAQAQALQWRFERASRGQLDIDLPRRYAADGSRYRRMIISGFDVFTLGT FT PGTANTGLRNGNPSGATALALDGREFRLADGSLLRIEAYLLPVSYDPFNRGMQEDTLGP FT WFRPGPRRVDASITISQGGANQFWLEAWNGRFHGSSAGNDGIVYCPADSALPNYVLPLG FT SVTNPGTAPISLRGSGCNINPPRRWLGYDSASRWRQNLPAQFSKASLPVRQLLAADTWR FT GIERPPGATSQAAEGFDVTWHTNYDFFPDCANPRTENVPTNGVMNAMPDPSLVLPPNRR FT ICARNGGGGDYLSNESAYRNTVLRDAFRLEIPAGHIHVPVMNNYYTGVPASGGGARNDN FT AISDARYEAYRSAIVAQTRALLVGVGNALAQGAQAD*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 65339..65479 FT /locus_tag="PA0050" FT CDS 65339..65479 FT /db_xref="GI:15595248" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248740" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MKRKMLAASLLLWMFSLTAQADCAVLGPGEDPCAGPVLGPTVCEC FT P*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 66303..68135 FT /locus_tag="PA0051" FT /name="phzH" FT CDS 66303..68135 FT /function="Putative enzymes" FT /product_synonym="probable glutamine amidotransferase" FT /protein_id="NP_248741" FT /note="GO_function: catalytic activity [goid GO:0003824] FT [evidence ISS]; FT GO_process: phenazine biosynthetic process [goid FT GO:0002047] [evidence ISS]; FT GO_process: asparagine biosynthetic process [goid FT GO:0006529] [evidence IEA]; FT " FT /db_xref="GI:15595249" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="potential phenazine-modifying enzyme" FT /translation="MCGLAGWVDYTRKLDDEFPAIFAMTDTLALRGPDAEGIWKHRNAL FT LGHRRLAVIDLSGGVQPMSYRFPTGQEVTLVYTGEVYNHDALRERLRRAGHEFRTRSDT FT EVVLHAYLQWGERCCEYLTGMFAFAVFDGRDGHLLLVRDRLGIKPLYYARHREGLLFGS FT EIKSILAHPEFAARLDAVGLVDLLTLSRGTSQTPFREVQELLPGHLLSWRPNSQAKLRR FT YWEVRRQEHADDLQSTVQRTRELVTRALGAQLHADVPVCSLLSGGLDSTALTGIAQRIA FT KAEHGGDINSFSVDFVGQAEQFRSDDLRPDQDQPFALLAAQYIGSRHRTVLIDNAELVC FT ERAREEVFRAKDVPFTFGDMDTSLHLMFGEIRRHSTVAISGEGADELFGGYGWFRDPQA FT VAAARFPWASRVRLPAGFIDAGFNRRCDLLQYQQASYDDGLRQVEHLAGDSPEERRMRE FT FSHLHLKRWMVLLLERKDRLSMCNGLEVRVPYTDHELVEYVYNVPWSIKSRDGEEKWLL FT KRACADYVPEAVLKRRKSPYPTSANLGYERFLRGSVRRLLEDAVNPVFGIVSREFLAAE FT LEHPEGYFNTQVSRHNLETALALEGWLRLYGLSA*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene complement(68188..68616) FT /locus_tag="PA0052" FT CDS complement(68188..68616) FT /db_xref="GI:15595250" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248742" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MDLRPSHVHVFPPSRDLPAATSPHRETLLRSGCAWNGSLYLGYPL FT GQPQLTVQRLSLAAHERLDWQVHPMPSALYVLKGELRLETRDGAQSTRVLEGEAAGCLM FT NIIHRLIAGAEPVEALLFHAGVEGMPVGLGERGEMPDA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 69272..69526 FT /locus_tag="PA0053" FT CDS 69272..69526 FT /db_xref="GI:15595251" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248743" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MNHCFANGNKRTAAAAATVFLLLNGIELTGPAQDFVDIMVALVTR FT EASVQDLEDWMFYWHRPFDAYNLPDSDAFERMVARLGIG*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(69543..70091) FT /locus_tag="PA0054" FT /gene_synonym="yjiI" FT CDS complement(69543..70091) FT /db_xref="GI:15595252" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248744" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="conserved hypothetical protein" FT /translation="MDRKTLDDTSKFLSYVLRHQPEAIGLTLDGEGWADIDALIAGAAR FT DGRALDRMLLGAVVENNDKKRFALSADGQRIRAVQGHSHAAVAIAYAPAVPPAVLYHGT FT ASRFLDSIRERGLVPGSRHHVHLSARRATALEVGRRYGSPVLLEIDARDMHLAGHLFHQ FT AENGVWLTERVPVRFIREA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(70130..70636) FT /locus_tag="PA0055" FT CDS complement(70130..70636) FT /db_xref="GI:15595253" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248745" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="MSLSIYQASIPTFLRTLGNLSAILKKAAAHAEAKNIDPRIFIDAR FT LAPDMFPLARQVQIASDAAKGAGARLAGLEVPSYADTETTFDELQARIARTVEFLEGIR FT EEQLDGAEERNVTLKVRGQEISFNGRDFLFGFALPNFFFHVTTAYAILRHNGVELGKMD FT FLGGA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(70702..71622) FT /locus_tag="PA0056" FT CDS complement(70702..71622) FT /db_xref="GI:15595254" FT /function="Transcriptional regulators" FT /protein_id="NP_248746" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable transcriptional regulator" FT /translation="MDRLTATRVFVEVIDSGSQTAAAERLDMSRAMVSRYLAELEEWVG FT ARLLHRSTRRLSLTDAGAELLPQCREMLAVADAMQATGQTRRDSPRGTLRITSSLSFAQ FT AWLTRAAAAFVERYPGTAIDLQVNSQVVNLVEERIDLALRIANQLDPNLIARRLGECRS FT VICAAPDYLRRHGTPRRPEDLALHNCLTYSYFGRSLWQFERDGEPTSVPVGGSLSANES FT TVLLEAAAAGAGISQQPLYSAAPLIRSGRLVALLPEWSPQVLGIHAVYASRRQMPPALR FT ALLDFLVERMAADPHWDEAGPLALA*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene 71730..72617 FT /locus_tag="PA0057" FT CDS 71730..72617 FT /db_xref="GI:15595255" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248747" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MSRHGLLRSLFAAAALLGAAGVFAASAEPLRLEVYNPGEKAIFAV FT SSELLVGQREAMLIDAQFSRADAEQLVKRIQASGKTLSTIYISHGDPDFYFGLDVLKAA FT FPEAKILATAQTVAHIQATKDAKLAYWGPILKDNAPTSLVVPEPLKGDQLKLEGHALKV FT VDLKGPSPDRTVLWIPSLKTVVGGVLVESGSHVWTADTQTQASRQAWVAMLDRIEALQP FT RRVVPGHFTGEEPKGLDGVRFTRDYLKALEAELPKARDSAALVEAMKRRYPNLPGEEGL FT ELSAKVLKGEMQWP*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 72680..73384 FT /locus_tag="PA0058" FT CDS 72680..73384 FT /db_xref="GI:15595256" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248748" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MNDLTLHYLYDPLCGWCYGASPLLAAACEVTGLDVRLHGGGMMTD FT ANRQPVGAGLRHYVMPHDLRIAQLTGQPFGKDYFDGLLRDTSAVFDSAPPTAAVLAAEA FT LDGLGAAMLARIQRAHYVEGRRIAERPVLLELGAELGLGEGFAEAFDACSGEPLRAHFA FT DSRRLMNRLGAAGFPTFALERDGRLQVLDTGRYLGQPDDWRAFLETQLRLAGGSGAVGG FT AAAPLCRIDGCA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 73468..73923 FT /locus_tag="PA0059" FT /name="osmC" FT CDS 73468..73923 FT /db_xref="GI:15595257" FT /function="Adaptation, Protection" FT /protein_id="NP_248749" FT /localization_and_confidence="Cytoplasmic, Class 1 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="osmotically inducible protein OsmC" FT /translation="MSIHSSGGVDMKKTASAVWQGGLKDGKGTLSTESGALKDNPYGFN FT TRFEGAPGTNPEELIGAAHAGCFSMALSMMLGEAGLTAERIETRAEVTLDKQSDGFAIT FT AVHLVLRARVPGADAQTFEQIANKAKAGCPVSKVLNAKISLDASLDG*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: response to stimulus [goid GO:0050896] FT [evidence ISS]; FT GO_process: response to oxidative stress [goid GO:0006979] FT [evidence RCA]; FT GO_process: response to oxidative stress [goid GO:0006979] FT [evidence IEA]; FT " FT gene 74034..74267 FT /locus_tag="PA0060" FT CDS 74034..74267 FT /db_xref="GI:15595258" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248750" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="conserved hypothetical protein" FT /translation="MKTIGLGIATLLFSATALAAPKPCEELKAEIETKIQSAGVTSYTL FT EIVRNDEVSDPNMVVGSCENGTKKIIYQKNDD*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(74279..74716) FT /locus_tag="PA0061" FT CDS complement(74279..74716) FT /db_xref="GI:15595259" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248751" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MRPLTRLVPLALLLLAGCAGPLPQPDPQMAWVELRSAPANTLLAE FT RLDGERLSDGRYFQVTPGRHVLEVRFQYELYGGSGGGGGGFGEPVQINCYQQVVYDGFE FT AGRRYRLEVRPQLRRALALLSDERGEVVARSNFQTSRCPPY*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(74773..75189) FT /locus_tag="PA0062" FT CDS complement(74773..75189) FT /db_xref="GI:15595260" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248752" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MRTLLLAGGLLVLSGCSLLMPTPDPNRAWVDLDTQPDADLAAVEV FT DDKSWDRTRYFEVDPGTRELTVRYQFTVDPTNIGPVDSPLWRDCQLNLKFKDFSAGQRY FT RLEAGHIGFRPWAKLYDQDNRELARGREGRCAKV*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 75281..76408 FT /locus_tag="PA0063" FT CDS 75281..76408 FT /db_xref="GI:15595261" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248753" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="VLVGRRAVRVLCYVPPMPRRLRHPLADLRLPRWVPCLALLALSGC FT STVSYYGQLASGQFALLRAREPAAAVIADPQRDARLRERLAKAEKARQFASERLGLPDN FT RSYRLYADIGRPYVVWNVFATPELSLQPVTHCFPIAGCVAYRGYYSEAAARAEAARQRA FT LGDDVYVGGVQAYSTLGWFDDPILSSMLRWDDERLATLIFHELAHQKFYLRDDTAFNES FT FATFVEQEGTRQWREYRGLPPADGREEKRREQFTALVLASRARLEALYAGPLDDAAKRA FT GKAAEFQRLRREYAALSQREWGGESPFKAWIDAPFNNAKLLPFGLYDQWVAAFAVLFRQ FT VGGNWPAFYARVRALGQLPLAERQAALQRLAAAAP*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(76416..77399) FT /locus_tag="PA0064" FT CDS complement(76416..77399) FT /db_xref="GI:15595262" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248754" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="hypothetical protein" FT /translation="MTDNPFATPTAPVQPPAREVPATTQPYAFIAVLALVTCLSFAVSL FT GIQWYNDIGEIRQRFSEHLQLMAPHWFTGLVFYAAANLLVLHAYREKRQLVEFRPLALL FT LIGYGLLNLVCGMLAGIGLAPLTLPFYQWVTAQSSYGVWLMAFNEAMSWVYLLLGSLLP FT LGLVLLGSRVNSPRLAEGEEARVAAWQVALGAALCFATLCFKLMQFLPYALLRYDEPWL FT YGLYLSGVALPAALLFGAVCTRLPARLQRFAAGRALLLAVVAMLLWSVALLAVGGGLAL FT LMILGLAPAGIGYTLLVALLGVGLLALLWPIGRLATRWCYADQLAA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(77432..78097) FT /locus_tag="PA0065" FT CDS complement(77432..78097) FT /db_xref="GI:15595263" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248755" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="MRDAALRYPNILFDLDGTLTDPREGITRSVQFALARLGIDEPDLA FT RLEHFIGPPLLQCFMQTYGFDEARAWEAVNHYRERFRVTGLYENRVFDGIPELLEALVG FT RGHTLYVATSKPGVFAREIARHFAFDRHFKAIYGSELDGTRTHKEELIRHLLDSEGLAA FT EHCLMIGDRMHDLLGASRNGVACIGVGYGFGSEDELRAHQPTHYCADLAALRQVLESH* FT " FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_process: cellular metabolic compound salvage FT [goid GO:0043094] [evidence IEA]; FT " FT gene complement(78090..78632) FT /locus_tag="PA0066" FT /gene_synonym="yrdA" FT CDS complement(78090..78632) FT /db_xref="GI:15595264" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248756" FT /localization_and_confidence="Cytoplasmic, Class 1 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="conserved hypothetical protein" FT /translation="VTIRSYQGKTPLLGERVFVDPSAVLVGDIEIGADSSVWPLVVIRG FT DMHRIRIGQRSSIQDGSVLHITHAGPFNPDGFPLSIGDEVTVGHKVLLHGCSIGNRVLV FT GMGSIVMDGAVIEDEVILGAGSLVPPGKVLESGFLYVGSPAKKARPLSDKERGFFAYTA FT GNYVKLKDLHIAEDYHA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_process: phenylacetate catabolic process [goid FT GO:0010124] [evidence IEA]; FT " FT gene 78710..80755 FT /locus_tag="PA0067" FT /gene_synonym="opdA" FT /name="prlC" FT CDS 78710..80755 FT /db_xref="GI:15595265" FT /function="Translation, post-translational modification, FT degradation" FT /protein_id="NP_248757" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Cytoplasmic, Class 2 (primary); Cytoplasmic, FT Class 3 (primary)" FT /product="oligopeptidase A" FT /translation="VSANPLLQAYDLPPFSSIRPEHVKPAIERILADNRAAIARLLETQ FT REQPTWKGLVLAMDELNDRLGAAWSPVSHLNAVCNSAELREAYEACLPELSAYSTELGQ FT NRALFEAYEALAKSPEAAGFDVAQKTILEHALRDFRLSGIDLPADKQKRYAEVQSRLSE FT LGSRFSNQLLDATQAWTKHVTDEAALAGLTDSAKAQMKQAAEAKGLDGWLISLEFPSYY FT AVMTYADDRALREEVYAAYCTRASDQGPNAGQNDNGPVMEEILDLRQELAGLLGFANYA FT ELSLATKMAESSDQVLSFLRDLAVRSKPFAARDLEQLRAYAAEQGCTELQSWDAGYYAE FT KLREARYSVSQEALRAYFPVDKVLSGLFAIVERLYGIQIRELHDFERWHADVRLFEILE FT NGEHVGRFYFDLYARANKRGGAWMDGARDRRRDAQGRLIDPVAYLVCNFTPAVNGKPAL FT LTHDEVTTLFHEFGHGLHHLLTRVEHAAASGINGVAWDAVELPSQFMENWCWEPEGLAL FT ISAHYETGVALPQDLLEKMLAAKNFQSGMMMVRQLEFSLFDFELHATHGDGRSVLQVLE FT GIRDEVAVMRPPAYNRFANSFAHIFAGGYAAGYYSYKWAEVLSADAFSRFEEEGVFNPD FT TGRAFREAILARGGSREPMLLFVDFRGREPSIDALLRHSGLVGEAA*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: cellular protein metabolic process FT [goid GO:0044267] [evidence ISS]; FT " FT gene 80752..81027 FT /locus_tag="PA0068" FT CDS 80752..81027 FT /db_xref="GI:15595266" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248758" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MSPAITRKRFIAGAVCPACSEQDKIQMWEEDGVPHRECVACGYAD FT TLNAQGQSIPKELGTRVNQNAPKPANPKVQSVQFFPNPKLKKKPDA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 81116..82174 FT /locus_tag="PA0069" FT CDS 81116..82174 FT /db_xref="GI:15595267" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248759" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="conserved hypothetical protein" FT /translation="MSAPLPPRGRGTASNPLNRFAPTHSEAFDDGWEQDVPPIQLTEVR FT EEIARTVISRNQSPDLPFDRSINPYRGCEHGCIYCYARPSHAYWDLSPGIDFETRLIAK FT SNVASALEQELSKPGYRCAPINLGANTDPYQPLERERRLTRQVLEVLLRFRHPLTIVTK FT GSLILRDLDLLRELAEQNLVAVMISLTTLDDELKRILEPRAAAPSARLRAIRTLSGNGI FT PVGVLCSPMIPMVNDMELERLLQAARDAGARSAAYMLLRLPREVGPLFEEWLAAHYPQR FT AEHVMSLVRQCRGGEVYDSRFGHRFRGQGPFADLLAQRFAVAMKRLGLDRREGFGLDCS FT RFAVPGAQMALF*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT CDS complement(82404..83318) FT /function="Membrane proteins; Protein secretion/export FT apparatus" FT /product_synonym="102874" FT /protein_id="NP_248760" FT /db_xref="GI:15595268" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Outer Membrane Vesicle, Class 1 (secondary); FT Unknown, Class 3 (primary)" FT /product="TagQ1" FT /translation="MSQPSENRLITSARYALCLLTASGVLLSGCASSGVGSVAQTTRAE FT YYPSCYEPVSHLRSTDNAVRNSAITGAITGGLLGGLAGGLASDENRGRNAALAAAGGAL FT AGGAAGYYMEKQKQISDDRARIGSYGTDVDRSTVEINRSVAYAKSAQSCYQSQFKALLD FT GRKNKSINEAEGRKRLAEIVSGLQETNALLVAANGRAGENISNYTQAYEKDLQQVGVPR FT AEVTKVAEAENRASTTKGGSKPKTGSNPKVPKEAVATEQTIRKAQDAQSEGNKVASQGQ FT GMIREVCNSPDMGDWAPPSCAKA*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene complement(82404..83318) FT /locus_tag="PA0070" FT /gene_synonym="102873" FT /name="tagQ1" FT CDS complement(83380..85092) FT /function="Protein secretion/export apparatus" FT /product_synonym="102876" FT /protein_id="NP_248761" FT /db_xref="GI:15595269" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Unknown, Class 3 (primary)" FT /product="TagR1" FT /translation="MFEKAILPLALGACLAFAAPAWAEGDSPDNPKPLADDVALPLPCG FT GEMVFRHVYVLAEGALDDREVNLGYAFNEGEAGYQQSFISGYRRDYVNGQFSLADLAPA FT WQQKLSASLPKPAAGTPLKPMLYFIGKYEVTARQYAAVMSQAAALSGQGEAPACDVPDG FT MAARLPKVNLSRFDAERFGAVYSAWLLKNHPELLPVSGRGKNPEDGGIGFVRLPTEVEW FT EFAARGGQAVSRQELEGRLFPRKVEGSDQEGPLGDWAVYNQVAGGTGQAARLLPVGMKR FT PNPLGLFDVIGNAAEMVQESFQLVHAGRRQGTYGGFVVKGGNYLEGEMTLFTGMRREYP FT LFAADGSEQRNETTGFRVAIGALSAPRSRYPELFAQWQKEGRLAALTDAIDDAQDPTKQ FT LDGIIAATRDPQMQAQLAQINEELKRNVSLIARQREEAAGNLIQSAALVAETINNYNIR FT LTNLKKDREKAVAARDQATAQLYAGAIANGRSALDGALAIYIDNLATGTRYTDAVIQAQ FT FQRIQEELNRNPVLGKSLVKRATLFVKHVGDYRQQHRAEPEAVLKELLASSGR*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT gene complement(83380..85092) FT /locus_tag="PA0071" FT /gene_synonym="102875" FT /name="tagR1" FT CDS complement(85085..86284) FT /function="Membrane proteins; Protein secretion/export FT apparatus" FT /product_synonym="102878" FT /protein_id="NP_248762" FT /db_xref="GI:15595270" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="TagS1" FT /translation="MRAGLLLSLAWADYRGEARLSLCAIFALAAVITPLLVLFGLKYGL FT VSTLTERLERAPSVREIIPVGGARYRAEDIAALAARADVAFAVPRTRQIAATADLSGGG FT ETALSVEMIPSAAGDPLLAGLPQPDRPTRVVLSHGAAEKLGAQPGERIVARIGRRMDGQ FT AQSQRLELEVLAVLPQERFARDALFAPLALLEAAEDYRDGRAVAAYGWPGKAGETPRAR FT IYPGFRLYARDLDAVEGLRRHFVASGVEVATQAEAIAQVRSLSRNLGLVFWIVAALAIG FT GAFAAIAASSLAAVERKRRALAVLRLLGFPTAALVGFVMLLALFSAVFGLFLAGLLYAA FT TAGALNHLFDNQSGEFVCRLLPSHYLTALLATLLCSVLAAASGGWRAARIEAAEGLRDV FT *" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene complement(85085..86284) FT /locus_tag="PA0072" FT /gene_synonym="102877" FT /name="tagS1" FT CDS complement(86284..87003) FT /function="Transport of small molecules; Protein FT secretion/export apparatus" FT /product_synonym="102880" FT /protein_id="NP_248763" FT /note="GO_component: ATP-binding cassette (ABC) FT transporter complex [goid GO:0043190] [evidence IEA]; FT " FT /db_xref="GI:15595271" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="TagT1" FT /translation="MILRLHEVARSHGAGRQRYRLRVPALELRAGRQLAIVGPSGCGKS FT TLLDLLALALAPDPGGRFEFLAGERPQDIAALWRDGRQDRLAALRRQHCGYVLQSGGLL FT EFLDVRRNIGLPCALLGAPSAERVQALAERLEIGDQLDKKPAALSVGQRQRVAIARALA FT HAPRLLLADEPTAALDPLNAERVMRLLVEQARERGACTVVATHDERLARAAGLEVLAIR FT WQREADDSVGACLEEVG*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene complement(86284..87003) FT /locus_tag="PA0073" FT /gene_synonym="102879" FT /name="tagT1" FT gene complement(87000..90098) FT /locus_tag="PA0074" FT /gene_synonym="tagE1" FT /name="ppkA" FT CDS complement(87000..90098) FT /function="Adaptation, Protection; Translation, post- FT translational modification, degradation; Protein FT secretion/export apparatus" FT /product_synonym="TagE1" FT /protein_id="NP_248764" FT /note="GO_process: cellular protein metabolic process FT [goid GO:0044267] [evidence IDA]; FT GO_process: response to stimulus [goid GO:0050896] FT [evidence IDA]; FT " FT /db_xref="GI:15595272" FT /localization_and_confidence="Outer Membrane Vesicle, FT Class 1 (secondary); Cytoplasmic Membrane, Class 3 FT (primary)" FT /product="serine/threonine protein kinase PpkA" FT /translation="MDIELPGFDIERELGEGAMATVYLATQRSLQRKVALKVMAAALAA FT DPSFAERFLREGRTLARLSHPNTVTIHDIGNVGSCYYMAMEYLPNGTLKERIQQGLDPE FT QGLAYVRQVAAALGYAHSQGLVHRDVKPANILFRADGTAVLSDFGIAKSIEDNTQFTQV FT GFAVGTPSYMSPEQARGQEIDGRADLYALGVVLYEILTGKLPYNGKDSLSTALAHLTEP FT LPELPIEQGRYQDILRQLLAKDPAERFPTAGALIAALDRLAPSALEATQIRPLATPQGS FT PRASNPPPAEPAPLPPADLGGLQPVSIQLPPVTPSAGGATPPPPPPSQAAKPPSPPPPP FT LPPAKPRAGGSRTPLIAAAAAAVLLAIGGGAWWLLGSGDAPSAADPAPLGQTPADKPQQ FT QTPVADAEQDGGERPLLMPGKKTLFQRVLTKPGAAISAEAGGPPRAGAVPAFSVLYVYA FT RKQVGGSPWLRVGASSNGEGDGWLPASAVSDWKQSLVLKFTERSGRAPVMFLNSAEQVE FT RLLGDTRAARDTLTQAVDHKGDPQVVAVEPNDRAIPQDQFYLLPIFDSKESFDADGQPA FT QLLEVASIDPGGSAAAPQAPGQAGQGGASGAASDTFRTGIVLVVDTSVSMQPYIDRVRE FT VIDGLQRQIGERGDLDKVSFGLVGFRNNTDKTPGLEYVSKTLVPLQPGNDAQRFAELSS FT QVRATDVSSHSFNEDAFAGIMQAVDEMDWSPYAGRVVLLVTDAGALRKNDPLGRTQMNE FT AEVRQAALRKGVKIYALHLRTPAGKNNHGYAEQQYRSLTADANPKIADLYIPVAGGEVN FT AFGNTVKEIGTVFADLVHDAGNRKPQAPRFDAAPSVASKSAAIGYAMQMEFLGRRDPVR FT APQVVTAWTADRDLTNPALPAFQVCVLLSKLQLNELQQSLKLIVDAAKRTQTSPKDFFQ FT EIASASAYMSRDPAQLVKGSNLAQSGVLGEYLEGLPYRSKSLNMTQDLWLSLSVAEQQD FT FIDELESKIRLYETFHNDVANWVRFGDADAGDALYRVPLSTLP*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT gene complement(90106..90834) FT /locus_tag="PA0075" FT /gene_synonym="tagG1" FT /name="pppA" FT CDS complement(90106..90834) FT /function="Putative enzymes; Protein secretion/export FT apparatus" FT /product_synonym="TagG1" FT /protein_id="NP_248765" FT /db_xref="GI:15595273" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="PppA" FT /translation="MVPNSVSYYRSASYSHVGMVRKVNEDASLDAPEAGLWVVADGMGG FT HAAGDFVSSLIVDTLRRIPAASSLPAYVGALRTGLAQVNERVRQEAGLRGVSVMGSTLV FT LLAARGNQASCLWAGDSRLYRLRGGVLEAISRDHSYVQELLDNALISEEEARHHPRANV FT VTRAVGVHEQLELSEAALHVLPGDSFLLCSDGLNKTADDSELRDVLSHSDPYAVVRSLV FT HLGLTRGAPDNITALVVRAF*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT CDS complement(90844..91524) FT /function="Protein secretion/export apparatus" FT /product_synonym="102886" FT /protein_id="NP_248766" FT /db_xref="GI:15595274" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="TagF1" FT /translation="LNSVGFYGKLAGRGDFVSRGLPNTFVEPWDAWLASGMRASQDELG FT AAWLDAYLTSPLWRFAIAPGLLGGEAVTGVVMPSIDRVGRYFPLTVACLLPANADLGGL FT VGGDDGWFEQVESLLLSTLEPEAEVEAFEQAVAQLPAPPCGPRIEQSLISGNLLRSEAV FT TPAQRLAALAQHACDGASHWWGRGSARISAGLMRYQGLPPAPAFGRFLTGEGEVIPLFP FT GIPG*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene complement(90844..91524) FT /locus_tag="PA0076" FT /gene_synonym="102885" FT /name="tagF1" FT CDS complement(91521..94826) FT /function="Protein secretion/export apparatus" FT /product_synonym="102888" FT /protein_id="NP_248767" FT /note="GO_process: protein secretion by the type VI FT secretion system [goid GO:0033103] [evidence IEA]; FT " FT /db_xref="GI:15595275" FT /localization_and_confidence="Outer Membrane Vesicle, FT Class 1 (secondary); Cytoplasmic Membrane, Class 3 FT (primary)" FT /product="TssM1" FT /translation="MQSLAEVSAPDAASVATAEELATLKQRMDEALALLKRAKLGGSER FT RNLYELPWYVIIGPPGSGKTTALMNSGLDFPLAAQMGAGAIRGVGGTRNCDWWFTDEAV FT LLDTAGRYTTQDSHAQVDKAAWLGFLDLLKTQRKRRPIDGAFIAISLSDLLLGSDAERA FT AHAQAIRARIQELYQQLGVRFPIYVMLTKFDLVPGFMEFFDSLNREERAQVWGMTFALD FT DGKSAEGPLAVFDSEFALLEQRLTARLVERLQQERDPARRDLVYGFPQQFAALRECLGE FT FLNGVFKPNPYEERPLLRGLYFTSGTQEGSPIDRLIGSMAQSMNLDRQHLARQTGTGRS FT YFIERLFREVAFGERGLVGTNPKVERRRKWLTIGALSATALVVLAVTAVWIASYRANQS FT YIAAVDQRVDPLARGIESLSPAQRDVLAVLPQLNAVQNLAGDAPSWAEGYGLYQGDMLG FT EESASVYRKLLIAVFAPRLVTRIEEQLRSGGSSDFLYEGLKAYLMLGSPDHYDADFIKA FT WISLDWERNLPRDLSPEQRQALHAHLDALLERRPPSARLDQDLVEDLRRQLQQLPVAQR FT VYDRVKRQRLPKDVPDFRISDAAGRDAPLVFARKSGKPLTDPLSGFFTYRGYREVFLTA FT SLSQAGTIAEEQWVLGRDLNDAGDAANLALDVRRLYFQDYLRQWDDLLADLTVVPITNV FT TQAADVLRILSGPTSPFRKLLEAVARETDLQKGDRLVAAQVKKAADGTVDKLKQRLGSL FT VGQEEEGAREQPRQVDSDPISAHFAELNSLVSKGEGGNEPAPIDSLLEDMNALYVQVSA FT MAGASGDSLLGDAKNQVAAAASRVALSAERQPPVVQGLVKNVVNSTTSSMMGSVRNQLN FT AAWISDVVSVYRQSLAGRYPIAAGSSRDATLEDFGHFFGAGGVMDSYFRQYLQPYVDTS FT ASTWRWQPGAAQKLGINPGVLHTFQRAAAIRDAFFRSGGMQPTVRFELKPVTMDAAISQ FT FILDLDGQQLTYDHGPSRPVAMQWPSANGLGVVRLTVTPPPSSGRSGLTLEGPWAWFRL FT LDQSDLERGNSPDRFTLRLRIDGSSIACELRASSAFNPFKSRVVSGFSLPERL*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene complement(91521..94826) FT /locus_tag="PA0077" FT /gene_synonym="102887" FT /name="tssM1" FT CDS complement(95048..96397) FT /function="Protein secretion/export apparatus" FT /product_synonym="102890" FT /protein_id="NP_248768" FT /note="GO_process: interaction with host via secreted FT substance [goid GO:0052048] [evidence IEA]; FT " FT /db_xref="GI:15595276" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="TssL1" FT /translation="MPPIDDPFGTPAGGGNGSPPDDRTMIMPRPGGRAPEPAGGPRGGD FT PYTPPPMASLAPLSGRGDGLNPLEQAAGPLLAMLTRLRNTIAHPAPASLRAQLLGYLRQ FT FEEKARQAGVAPDEVMLARYVLCTALDEAVLSTPWGSTSDWGKQSLLITLHNEAWGGEK FT VFQLLEHCLQNPHQRLHLLELLYLCTSLGFEGRYRVMHDGRSQLEALRERTAAVIRSTR FT GEYEHELSPHWRGLSVMRDRLSQYLPPWVGIAIGLALLLALLFGLRMKLAADAEPVFKR FT IHAIGEIPVQAIDRPAVQPRVIERPRLARFLADDIKAQRVAVEDAVDRSVVTIRGDELF FT ASASASVRDEFQPLLLRIADALRKVKGQVLVTGHSDNRPIATLRYPSNWKLSQARAQEV FT ADLLGATTGDAGRFTAEGRSDTEPVATNASAEGRARNRRVEITVFAEGAQ*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene complement(95048..96397) FT /locus_tag="PA0078" FT /gene_synonym="102889" FT /name="tssL1" FT CDS complement(96404..97738) FT /function="Protein secretion/export apparatus" FT /product_synonym="102892" FT /protein_id="NP_248769" FT /note="GO_process: protein secretion by the type VI FT secretion system [goid GO:0033103] [evidence IEA]; FT " FT /db_xref="GI:15595277" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="TssK1" FT /translation="MSWNNRVVWSEGMFLRPQHFQQHDRYLETLVDGRCRSLLAGGWGF FT SELKLDDALLTQGKLAIVSARGVLPDGTPFNIPADDPAPAPLNVEESLRDGIVYLGLPL FT KRVGTRDTVEEGEALGGARYVSQVQEVRDDNAAFESRAPVALGSQAFRLLTERDGLGEY FT AAVGVARVREKRADQALSLDEDYLPPVLDIAAAPPLASFAKELLGLLHQRGEALAGRVV FT ASSAGGASEIADFLLLQLVNRAEALTGHLSRVRPLHPQELYRELVALAGEFCTFTASQR FT RPEEYPVYNHDDLAASFAPVMLALRQALATVIDAKAIAIPIVEKAYGVHVAMLSDRSLI FT DNASFVLVVRADVPGESLRGHFPQQAKVGSVEHIRDLVNLQLPGIGLLPMPVAPRQIPY FT HAGSTYFELDRGSAHWKQLTHSGGFAFHIAGQFPGLNLAFWAIRG*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene complement(96404..97738) FT /locus_tag="PA0079" FT /gene_synonym="102891" FT /name="tssK1" FT CDS complement(97754..98218) FT /function="Protein secretion/export apparatus" FT /product_synonym="102894" FT /protein_id="NP_248770" FT /note="GO_process: protein secretion by the type VI FT secretion system [goid GO:0033103] [evidence IEA]; FT " FT /db_xref="GI:15595278" FT /localization_and_confidence="Outer Membrane Vesicle, FT Class 1 (secondary); Cytoplasmic Membrane, Class 3 FT (primary)" FT /product="TssJ1" FT /translation="MQKLIVALFGLLLAACSSSPPETPPTRVVIWLHAAPNLNPSAAGQ FT AAPLRLRLYELKKDTAFGRADYFALTDNAQSTLGGDLVEQDEFLLRPGEERRIERTLDE FT QTRQLGFVAAYRDLDRATWRQVLDVPGQRTSHLDITLGAQAIGIVARPAP*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene complement(97754..98218) FT /locus_tag="PA0080" FT /gene_synonym="102893" FT /name="tssJ1" FT gene complement(98263..99756) FT /locus_tag="PA0081" FT /name="fha1" FT CDS complement(98263..99756) FT /db_xref="GI:15595279" FT /function="Protein secretion/export apparatus" FT /protein_id="NP_248771" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="Fha1" FT /translation="MPLRLTITSYHKLTPGQCSEKVLDQGQLTIGRGPDNDWVLPDPER FT LVSSRHCTILNRDGVYYLTDTSTNGVLLVNAGHRLRRGNSEPLQDGETVRLGEYDILVQ FT LGHDIALPGSGNPQTDPFTSFDALMSRQAAGSAPAFAEPAPTPHPAVTAHFQGGSPLDT FT KPDLFDFLTPPPPGAAPRPDHVPAEQHDFRPPEPVIPPPPATTPAPPPAGGAPLIPADW FT DPFAELLGNTPAPSATPVAQPLPTAEPTPLAMPFADPGITQQPQPQPQPQPQPQPQPQP FT QPQPASVAAPTPPASAAASAGGDLLQAFLRGAGMTQLKVDPAGAEAQMEAIGRSYRGLV FT EGLVDVLRARASLKGEFRMAQTMIQPVQNNPLKFAPNVDEAMLLLLRRDNQAFMAPDRA FT VADSFEDLKAHQLAVMAGVQAAIRHLLARFEPAALEARFGKPAGLSGLLPGARQAQNWD FT SFTELYAKILREAEDDFQELFGREFSRAYEEHSARLRRS*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT /note="GO_process: protein secretion by the type VI FT secretion system [goid GO:0033103] [evidence IEA]; FT " FT CDS 100124..101158 FT /function="Protein secretion/export apparatus" FT /product_synonym="102898" FT /protein_id="NP_248772" FT /db_xref="GI:15595280" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="TssA1" FT /translation="VLDVPVLLAAVSPDSPCGDDLEYDAAFLELERIAQGQPERQMGDA FT VLPAEPPEWPRVRALASELFGRSKDLRVANLLLQSNVALDGLDGLADGLLLVRELLGQY FT WDGVYPLLDADDDNDPTFRINALTGLVAEPLLQLVWAIPLVRSRAFGPVNLRAALNAAG FT LQRFASETLSPEQIAGAFADADADALAATRRALDGAQEHALAIESGVAERVGSAQGLDL FT GPLRQLLRQALQVFDLYGPQGAGESLAPGAEAVADEQVGAAPVAAVAAPAPRASGEIAN FT REDVLRQLDRLLEYYVRHEPSSPVPVLLKRAKTLVTADFAEIVRNLIPDGISQFETLRG FT PESE*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene 100124..101158 FT /locus_tag="PA0082" FT /gene_synonym="102897" FT /name="tssA1" FT CDS 101247..101765 FT /function="Protein secretion/export apparatus" FT /product_synonym="102900" FT /protein_id="NP_248773" FT /note="GO_process: protein secretion by the type VI FT secretion system [goid GO:0033103] [evidence IEA]; FT " FT /db_xref="GI:15595281" FT /localization_and_confidence="Cytoplasmic, Class 1 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="TssB1" FT /translation="MGSTTSSQKFIARNRAPRVQIEYDVELYGAEKKVQLPFVMGVMAD FT LAGKPAEPQAAVADRKFLEIDVDNFDARLKAMKPRVAFNVPNVLTGEGNLSLDITFESM FT DDFSPAAVARKVDSLNKLLEARTQLANLLTYMDGKTGAEEMIMKAIKDPALLQALASAP FT KPKDDEPQA*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene 101247..101765 FT /locus_tag="PA0083" FT /gene_synonym="102899" FT /name="tssB1" FT CDS 101778..103274 FT /function="Protein secretion/export apparatus" FT /product_synonym="102902" FT /protein_id="NP_248774" FT /note="GO_component: type VI protein secretion system FT complex [goid GO:0033104] [evidence IEA]; FT " FT /db_xref="GI:15595282" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="TssC1" FT /translation="MAELSTENLAQGQTTTEQTSEFASLLLQEFKPKTERAREAVETAV FT RTLAEHALEQTSLISNDAIKSIESIIAALDAKLTAQVNLIMHHADFQQLESAWRGLHYL FT VNNTETDEQLKIRVLNISKPELHKTLKKFKGTTWDQSPIFKKLYEEEYGQFGGEPYGCL FT VGDYYFDQSPPDVELLGEMAKISAAMHAPFISAASPTVMGMGSWQELSNPRDLTKIFTT FT PEYAGWRSLRESEDSRYIGLTMPRFLARLPYGAKTDPVEEFAFEEETDGADSSKYAWAN FT SAYAMAVNINRSFKLYGWCSRIRGVESGGEVQGLPAHTFPTDDGGVDMKCPTEIAISDR FT REAELAKNGFMPLLHKKNTDFAAFIGAQSLQKPAEYDDPDATANANLAARLPYLFATCR FT FAHYLKCIVRDKIGSFKEKDEMQRWLQDWILNYVDGDPAHSTETTKAQHPLAAAEVVVE FT EVEGNPGYYNSKFFLRPHYQLEGLTVSLRLVSKLPSAKEA*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene 101778..103274 FT /locus_tag="PA0084" FT /gene_synonym="102901" FT /name="tssC1" FT gene 103350..103838 FT /locus_tag="PA0085" FT /name="hcp1" FT CDS 103350..103838 FT /db_xref="GI:15595283" FT /function="Secreted Factors (toxins, enzymes, alginate)" FT /protein_id="NP_248775" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Extracellular, Class 1 (primary); FT Extracellular, Class 3 (primary)" FT /product="Hcp1" FT /translation="MAVDMFIKIGDVKGESKDKTHAEEIDVLAWSWGMSQSGSMHMGGG FT GGAGKVNVQDLSFTKYIDKSTPNLMMACSSGKHYPQAKLTIRKAGGENQVEYLIITLKE FT VLVSSVSTGGSGGEDRLTENVTLNFAQVQVDYQPQKADGAKDGGPVKYGWNIRQNVQA* FT " FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT /note="GO_process: interaction with host via secreted FT substance [goid GO:0052048] [evidence IEA]; FT " FT CDS 104006..104851 FT /function="Protein secretion/export apparatus" FT /product_synonym="102906" FT /protein_id="NP_248776" FT /db_xref="GI:15595284" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="TagJ1" FT /translation="MADPSFASGRLGSRLQGSIAMIAEELLRAGRLDDALKALQEQVRS FT QPSNATLRIFLFQLLAVMGQWARAQNQLKVVGELDASALPMVQTYSTAIDCEALRREVF FT AGRLTPVILGQPAEWIAPLLQALSLDAEGHGEAAQALREQAFDAAPAVPGRIGEAPFAW FT LADADTRLGPVLEVIVNGRYAWLPMSNLRSLKVEAPSDLRDLVWLPAELTLANGGATVA FT LLPARYAETVEHGDDAARLGRKTEWLDSGLPVGQRLFVTDAGETALFDLRELDFEPTDA FT *" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene 104006..104851 FT /locus_tag="PA0086" FT /gene_synonym="102905" FT /name="tagJ1" FT CDS 104853..105362 FT /function="Protein secretion/export apparatus" FT /product_synonym="102908" FT /protein_id="NP_248777" FT /note="GO_process: protein secretion by the type VI FT secretion system [goid GO:0033103] [evidence IEA]; FT " FT /db_xref="GI:15595285" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="TssE1" FT /translation="MAELTLQERLQPSLLDRLTDDEPGNLKEAAERRVLTLNQLKASVL FT RDLAWLFNTTSLFDHGPAARMPAGNSVLNYGLPALAGHTASSVDVHAIEALLTETIATF FT EPRIIRSSLRVRAQLLPGEMDHNALSFEIEGDLWAEPAPLRLLLTTNLDLETGHVRVAQ FT GERRRT*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene 104853..105362 FT /locus_tag="PA0087" FT /gene_synonym="102907" FT /name="tssE1" FT CDS 105359..107218 FT /function="Protein secretion/export apparatus" FT /product_synonym="102910" FT /protein_id="NP_248778" FT /note="GO_process: protein secretion by the type VI FT secretion system [goid GO:0033103] [evidence IEA]; FT " FT /db_xref="GI:15595286" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="TssF1" FT /translation="MNPRLLEYYNQELQHIRESAAEFAEEFPKIAGRLSLSGFECADPY FT VERLLEGFAYLTARVQLKLDAEYPTFTHNLLEIAYPHYLAPTPSMTVVQLRPDPNEGAL FT SSGFSIERGASLRGQLGPDDQTACEYRTAHPVTLWPLEVAQADYFGNPAAVLGRLAASE FT PRAKAGLRIRLRSGAGIPFDSLSLDALPLYLHGADEQPYRLYEQLLGNACAVFVRAPDN FT AWVERLPTSSLRARGFDDEDALLPVVPRAFQGYRLLQEYFALPARFLFVEFSGLNRALR FT RCHGEELELVVLFGKHDQRLEGTVDAEQLVPFCTPAINLFPRRCDRIHLSDRVNEHHVI FT VDRTRPLDFEVHSLQQVSGHGSGPEQPFQPFYAVRDPARYGREQAYFRVRREPRVLSSK FT QRRKGPRSTYVGSETFVALVDANQAPYRHDLRQLGIAALCTNRDLPLFMPIGAHKSDFT FT LEDSAPVMQVRCLAGPSRPRASRAHDASAWRLISQLSLNYLSLAERGQGAAALRELLRL FT YGDSGDPALQLQIEGLREVSSKPCTRRLPMPGPIVFGRGLEITLDFDENAFRGTGVFLL FT GAVFERFLARYVSINSFTETVLRTGERGEVMRWQAKPGSRPNL*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene 105359..107218 FT /locus_tag="PA0088" FT /gene_synonym="102909" FT /name="tssF1" FT CDS 107182..108228 FT /function="Protein secretion/export apparatus" FT /product_synonym="102912" FT /protein_id="NP_248779" FT /note="GO_process: protein secretion by the type VI FT secretion system [goid GO:0033103] [evidence IEA]; FT " FT /db_xref="GI:15595287" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="TssG1" FT /translation="MAGEAGQPSEPLNLLAGMAAAPWDYDFFQALRRIECESPQLPRLG FT HSVRLADDPLRLGQKPDCTFAPSTLASVSQAGTAAVPRLDQFFFGLTGPNGPLPLHLTE FT YARERQRNVNDATFKRFMDVFHHRLLTLFYRAWAEARPEISHDRIDDDYWSARLAALSG FT RGMPSLRGREPLADTARYYYTGHLAAQTRYPDGLRVILAEYFEVPVAVEEYVGQWLELP FT ERSRLGVDSTSLGMDVCLGTHVWDRQHKFRLRLGPLDLDQYQRFLPDGDHFVELAAWVA FT EYLGEELDWDVNLVLQRHEVPPLGLQGGGRLGFNTWLGDPGQDARDLLLARQYATARPH FT EHKEKEHE*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene 107182..108228 FT /locus_tag="PA0089" FT /gene_synonym="102911" FT /name="tssG1" FT gene 108221..110929 FT /locus_tag="PA0090" FT /name="clpV1" FT CDS 108221..110929 FT /db_xref="GI:15595288" FT /function="Translation, post-translational modification, FT degradation; Chaperones & heat shock proteins; Protein FT secretion/export apparatus" FT /protein_id="NP_248780" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="ClpV1" FT /translation="MSEISRVALFGKLNSLAYKAIEAATVFCKLRGNPYVELVHWFHQI FT LQLPDSDLHQIVRQSGIDPARLAKDLTEALDRLPRGSTSITDLSSHVEEAVERGWVYGS FT LMFGESQVRTGYLVIGILKTPSLRHALTGLSAEFAKLKVEALTERFDEYVGASPENGLS FT ASDGFNAGAAPGEASGALAPSAMGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLV FT DILMRRRQNNPILTGEAGVGKTAVVEGFALRIVAGDVPPALKDVELRALDVGLLQAGAS FT MKGEFEQRLRQVIEDVQSSEKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLR FT TVAATTWAEYKKHIEKDPALTRRFQVVQVDEPSEHKAILMMRGVASTMEKHHQVQILDE FT ALEAAVRLSHRYIPARQLPDKSVSLLDTACARTAISLHAVPAEVDDSRRRIEALETELA FT IIRRESAIGVATAERQRNAETLLAEERERLAALEQRWAEEKRLVDELLETRARLRAAAE FT AVDAGGVPLGEGEVRLDEEQRQALHARLAELQAQLSALQGEEPLILPTVDYQAVASVVA FT DWTGIPVGRMARNEIETVLNLDRHLKKRIIGQDHALEMIAKRIQTSRAGLDNPSKPIGV FT FMLAGTSGVGKTETALALAEAMYGGEQNVITINMSEFQEAHTVSTLKGAPPGYIGYGEG FT GVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQVFDKGVMEDGEGRVIDFKNTLILLTT FT NAGTEMIASLCADPELMPEPEAIAKSLREPLLKIFPPALLGRLVTIPYYPLSDDMLKAI FT SRLQLGRIKKRVEATHKVPFEFDEGVVDLIVSRCTETESGGRMIDAILTNTLLPDMSRE FT FLTRMLEGKPLAGVRISSRDNQFHYDFAEAE*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_function: ATPase activity, coupled [goid FT GO:0042623] [evidence IEA]; FT " FT gene 110976..112907 FT /locus_tag="PA0091" FT /name="vgrG1" FT CDS 110976..112907 FT /db_xref="GI:15595289" FT /function="Protein secretion/export apparatus" FT /protein_id="NP_248781" FT /localization_and_confidence="Extracellular, Class 1 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="VgrG1" FT /translation="MQLTRLVQVDCPLGPDVLLLQRMEGREELGRLFAYELHLVSENPN FT LPLEQLLGKPMSLSLELPGGSRRFFHGIVARCSQVAGHGQFAGYQATLRPWPWLLTRTS FT DCRIFQNQSVPEIIKQVFRNLGFSDFEDALTRPYREWEYCVQYRETSFDFISRLMEQEG FT IYYWFRHEQKRHILVLSDAYGAHRSPGGYASVPYYPPTLGHRERDHFFDWQMAREVQPG FT SLTLNDYDFQRPGARLEVRSNIARPHAAADYPLYDYPGEYVQSQDGEQYARNRIEAIQA FT QHERVRLRGVVRGIGAGHLFRLSGYPRDDQNREYLVVGAEYRVVQELYETGSGGAGSQF FT ESELDCIDASQSFRLLPQTPVPVVRGPQTAVVVGPKGEEIWTDQYGRVKVHFHWDRHDQ FT SNENSSCWIRVSQAWAGKNWGSMQIPRIGQEVIVSFLEGDPDRPIITGRVYNAEQTVPY FT ELPANATQSGMKSRSSKGGTPANFNEIRMEDKKGAEQLYIHAERNQDNLVENDASLSVG FT HDRNKSIGHDELARIGNNRTRAVKLNDTLLVGGAKSDSVTGTYLIEAGAQIRLVCGKSV FT VEFNADGTINISGSAFNLYASGNGNIDTGGRLDLNSGGASEVDAKGKGVQGTIDGQVQA FT MFPPPAKG*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT /note="GO_process: protein secretion by the type VI FT secretion system [goid GO:0033103] [evidence IEA]; FT " FT gene complement(113022..113306) FT /locus_tag="PA0092" FT CDS complement(113022..113306) FT /db_xref="GI:15595290" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248782" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MTPIEYIDRALALVVDRLARYPGYEVLLSAEKQLQYIRSVLLDRS FT LDRSALHRLTLGSIAVKEFDETDPELSRALKDAYYVGIRTGRGLKVDLP*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(113303..114595) FT /locus_tag="PA0093" FT CDS complement(113303..114595) FT /db_xref="GI:15595291" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248783" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="hypothetical protein" FT /translation="MDAQAAARLGDEIAHGFGVAAMVAGAVAGALIGAAVVAATAATGG FT LAAVILAGSIAAGGLSMFQIVKGLTTIFELPEPTTGVLIRGSFNVYVNSRNAMRAGDDV FT SATCSGLPLNHPLWPFPVLIAEGSATVYINGKPAARLQSKMVCGAHIKTGSQNTFIGGP FT TERVAFVLDLEEWLHTGLEALGLAALAGGLLLAAMAGVAALVGVVAIGGLMMGGMALLG FT DLGDRLGPGYRDLFQGVAGMALLGFGPKLAGRRPAAVTSETAQRRAYLNNKFGRSGNLD FT HDINYRGNRETAAKFFKSKDIDPADAESYMNGLDFNHPVRVETLAPGKNLWQYQSPGAP FT QGNWYTLSPRVQPTELGINPMGTNRAANTIEPKVLNSYRTTQKVEVLRSTAAPTDDFWS FT VKGQSYPAKGGAQQLFSNEKGSFGLLPREGS*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(114611..115045) FT /locus_tag="PA0094" FT CDS complement(114611..115045) FT /db_xref="GI:15595292" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248784" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="VTLYRLHEADLEIPDAWQDQSINIFKLPASGPAREASFVISRDAS FT QGDAPFADYVARQLENAEKQLPGFKLHKRWDINIHGHAAVLLDYQWQREGRDLMLRQVF FT IERRPAVLITTLTTTPADLPHHEPAWKQAMQTLVPRPTPS*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 115299..117524 FT /locus_tag="PA0095" FT /gene_synonym="vgr" FT CDS 115299..117524 FT /db_xref="GI:15595293" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248785" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="conserved hypothetical protein" FT /translation="MALAQQTRLVRVDSPLGAEVLQLQRMEGREELGRPFAYELELISE FT NPDLPLDGLLGKPASLALELHDGSRRHFHGIVAACSQGSGNGQFASYQVTLRPWLWLLT FT RTSDCRIFQNQKVPDIIKQVFRDLGFSDFEDALSRSYREWEYCVQYRETSFDFVSRLME FT QEGIYYWFRHEQSRHILVLSDAYGAHQSPPNYASVPYYPPTLEQRERDHFYDWHMAREV FT QSGSLSLNDYDFQRPGARLEVRSNIARSHAAADYPLYDYPGEYVQSQDGEQYARTRIEA FT LQARYERVRLRGRARGLGSGHLFKLSGYPREDQNREYLVVGAEYRVVQELYETGGGGVG FT AQFESELDCIDAGQAYRPLPTTPLPIVRGPQTAVVVGPKGEEIWTDQYGRVKVHFHWDR FT HDQSNENSSCWIRVSQAWAGKNWGSMQIPRIGQEVIVSFLEGDPDRPIITGRVYNAEQT FT VPYELPANATQSGMKSRSSKGGTPANFNEIRMEDKKGAEQLFIHAEKNQDIEVENDETH FT WVGHDRTKTIDHDETVHVKHDRTETVDNNETITIGVDRTEKVGNNEKISIGANRTEDVG FT SNETISIGVDRTEKVGSNEKISIGANRTEDVGNDETISIGANRSESVGNNETISIGADR FT SESVGANETIDIGGNQSTSIGKNESRSVGQGRDTSVGKDDSLDVGKSFTLNAGDSITLV FT TGAASIRMKKDGSIVISGKNITIDGSGAINVKADKNVVVKGRKILQN*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 117552..118001 FT /locus_tag="PA0096" FT CDS 117552..118001 FT /db_xref="GI:15595294" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248786" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MSVEIHLPGATTALPARLDGVVIGVLLDVPDAAAPVVAYPGCPSE FT HGLAAATTTQLSRADIGAQVALMFVAGDPRQPLLIGRIQRLPQEALAQLDGERLEFSAE FT REIVLRCGKASITLTRAGKVIIRGAYLSSRSTGVNRIKGGSVQIN*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 117931..119130 FT /locus_tag="PA0097" FT CDS 117931..119130 FT /db_xref="GI:15595295" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248787" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="VAPIFPAAPPGSTGSRAVRCRSTERGGPDMELLNATPLAAAYNQG FT LDAEGRESLVVIAKGSFDLPLDGREARLLDEQQTLLMVDEFYGEPGFSAPRRECEFVPF FT KPFCDVLVLGSAQAPGGRPVQQLTAGIRVGRVSKALTVHGPRQWEPGLLGAGAGVAQPF FT QSQDISYASAFGGSHASPDNPGFMDCYMANPAGCGWFPRSADTAEIVGTPMPATEKLGE FT PVDSPHGRFTPMALGPLGRHWQARVGFAGRYDDAWLAERFPFLPADFDERYFQSAPADQ FT WTDHLRGGEEVLLLNLTGEERAAFRVPRREVPVTFFLKKGGHETAQARIDTLLVDCDAR FT RVEVTWRIRRPLKRNLFEIAQVLVGSKSAAWWRARELGKDYYPSLAALARSRQAEEDEA FT *" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 119127..120164 FT /locus_tag="PA0098" FT CDS 119127..120164 FT /db_xref="GI:15595296" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248788" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="MSQALSIVASGMVSAVGLSAPASCAAIRCALDNFQETRFIDQGGE FT WLLAASVPLEQPWRGRAKLLKMAARAIDEALRGQPDLDCTELPLLLCVAEGDRPGRCAG FT LDESFLRDLEGELGRRFHPSSALIARGRVGGAVALLNARKLIQGGCRQVLVAGVDSFVS FT GPTLAAYEARERLLTSQNSNGFIPGEGAAAVLVAAPLHEEAPQLLCIGLGFGVEKATVE FT SEDLPLRADGLSQAVRAALAEAGCGLEQMDYRLTDISGEQYYFKEASLTLSRNLRVLKP FT KFDLWHPADCIGECGAAIGPALLAVALAASRKGYGDGPNVFCHLGNDAGERAAALLSYR FT RVRAA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 120164..121324 FT /locus_tag="PA0099" FT CDS 120164..121324 FT /db_xref="GI:15595297" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248789" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MANEVYANNMEISCKAANGKSIAAFPDVCFTPPQAPPTPLGVPIP FT YPNTGLSKDTTKGTRTIRITRKEVMLKNKSYYKTSYGDEPGRAPKKGIVTSKIKGKVYF FT TSWSMNVKFESKNVVRHLDLTTHNHASFPGNTPVWPYLDQATVDAGGGPCSNEVKKEKK FT DCADFKPHGSKDACAGLGAGKPSGKKTSNEADRLADKVAARKCLTARRCALQPYKPNSC FT CPQQTAHHLIEASALHDKGRGGKGSVPLKGISNYSENKAPCVCAEGVNQNVGTHGLMHT FT FQSAAAAKSRSGTLQLSNGSSISAKKTTYGTAKRQSMAAMGKVFPQSKCSKECLSAQLD FT NYHKQCGINARTPIKAVETGQTDVTAATQAIKTRNARLGATRSRVR*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 121346..122266 FT /locus_tag="PA0100" FT CDS 121346..122266 FT /db_xref="GI:15595298" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248790" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MLKKLSPIFSNITGVVRYQDLAYVASVSDEIQEQNIAHSYVTEWD FT CGTWCVAGEDDDMLPWEIVSATVVHEPVEQALFLGARGQVFCMGSGDIHEEQLPDGDDA FT IGGRGNMRGVACIDGVAYACGMDRQVYRRFDENDWRAIDTGARPPAGSEAVVGFEAIGG FT FGAREIYAVGWDGEIWQYDGKRWQPRESPTNLILTAICCAEDGSVYACGQAGTLLRGRN FT DHWEIIAQDDVDEDLWSLAWFDGALYVSSATAVYTLVGGHLKEVDFGDEQPQRCFHLSA FT ADGVLWSIAAKDIFSFDGQQWTRID*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 122248..123495 FT /locus_tag="PA0101" FT CDS 122248..123495 FT /db_xref="GI:15595299" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248791" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="hypothetical protein" FT /translation="MDAHRLSIAAIVDQHAEEAAFLALLRDYAVRAPHYDLEELAELDQ FT RIEAHLDGLAIAGQAGHDALLEQLDAHAQGEAFALAVLAMQAGDDALIGRMRACLAASP FT EARRGFAAALGWLDWDQARPWVERLLASPEPLFRAIGLAACGMHRHDPGPALLSALGHA FT DPAVLARAARTAGELRRRDLMANIRAYRAHDDPSLRFWANWATAQMGDEEALGPLRAFA FT GQPGPFQLPATMVLLAWQPRDTSMAWIRQLMQAADTRRIGIQATGLFGDPVAVPWLIQQ FT MRDESLARVAGEAFSLITGADLALLDLELEALPDYDPGPNDDLDDDNVALDDDENLSWP FT EAERVSAWWRDNGARFVAGRAYLLGEPLGEARCRQVLRDGQQRQRMAAACLLARFVPNL FT PLFPTGAPVRRQLDLF*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_process: biological_process [goid GO:0008150] FT [evidence IEA]; FT " FT gene 123871..124599 FT /locus_tag="PA0102" FT CDS 123871..124599 FT /db_xref="GI:15595300" FT /function="Central intermediary metabolism" FT /protein_id="NP_248792" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable carbonic anhydrase" FT /translation="MPDRMRGVKSDSPEQESADDALKRIVDGFQHFRREVFPEQQALFK FT KLANSQRPRAMFITCADSRIVPELITQSSPGDLFVTRNVGNVVPPYGQMNGGVSTAIEY FT AVLALGVHHIIVCGHSDCGAMRAVLDPQTLERMPTVKAWLRHAEVARTVVADNCDCGAS FT HDTLGVLTEENVVAQLDHLRTHPSVASRLASGQLFIHGWVYDIESAQIRAYDAKQGRFL FT PLDGEHPVPMATPAPRYLSS*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene 124810..126381 FT /locus_tag="PA0103" FT CDS 124810..126381 FT /db_xref="GI:15595301" FT /function="Membrane proteins; Transport of small FT molecules" FT /protein_id="NP_248793" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="probable sulfate transporter" FT /translation="MHVSKVFPSLRDTLPRDLMASVVVFLVALPLCMGIAIASGMPPAK FT GLLTGIVGGLVVGFLAGSPLQVSGPAAGLAVLVFELVRTYGVAMLGPILLLAGAIQLLA FT GRLRLGCWFRVTSPAVVYGMLAGIGILIVLSQLHVMLDLAPKASGLDNLLAFPQAAFAA FT LGSLGMDSGLDAALLGLGTIAVMWGWDKLRPQRLRFLPGALLGVSLATLASLWLALDVR FT RVEVPANLGEAIVWLRPADLLALADPSLLLAAVVVAFIASAETLLSAAAVDRLHDGPRS FT DMDRELSAQGVGNMLCGLLGALPMTGVIVRSSANVNAGARTRASAIFHGLWLLAFVLLL FT GSLLRQIPVASLAGVLVYTGVKLVDFKALGNLSRYGRMPMLVYAATALAIVFTDLLTGV FT LVGFALTLLKLVLKAARLKIALRYTGEHEAELRLSGAATFLKVPALSRVLDEVKPGTTL FT HVPMDNLSYVDHACMELLEDWGRMAPVQGSRLVIEPRALKRRLEGRLRGSVGLGGARNG FT GAVSPG*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_component: membrane [goid GO:0016020] [evidence FT IEA]; FT " FT gene 126518..127114 FT /locus_tag="PA0104" FT CDS 126518..127114 FT /db_xref="GI:15595302" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248794" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="MVDGFVQPVGEGLADQLVGHQVGYGGVQWDQCLAEVGDVAVVHFF FT HQAVRQVGFVEQGVEAVVAGEQRRRGEEELLGDLQHRLDPFLDAGFAGHAVGGVEQVRY FT LFDVGVDEAGEYVFRVLALRLDGAMQVGQAAGYQISQVTVAGFAEVRLLDEFTEGSGVH FT GVSHTTGMVKKRRNIAGGARRLRRDCHNRFVVMRG*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 127378..128502 FT /locus_tag="PA0105" FT /gene_synonym="coII" FT /name="coxB" FT CDS 127378..128502 FT /db_xref="GI:15595303" FT /function="Energy metabolism" FT /protein_id="NP_248795" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="cytochrome c oxidase, subunit II" FT /translation="MLRHPRVWMGFLLLSAISQANAAWTVNMAPGATEVSRSVFDLHMT FT IFWICVVIGVLVFGAMFWSMIVHRRSTGQQPAHFHESTTVEILWTVVPFVILVVMAVPA FT TRTLIHIYDTSEPELDVQVTGYQWKWQYKYLGQDVEYFSNLATPQDQIHNRQAKDEHYL FT LEVDEPLVLPVGTKVRFLITSSDVIHSWWVPAFAVKRDAIPGFVNEAWTKVDEPGIYRG FT QCAELCGKDHGFMPIVVDVKPKAEFDQWLAKRKEEAAKVKELTSKEWTKEELVARGDKV FT YHTICAACHQAEGQGMPPMFPALKGSKIVTGPKEHHLEVVFNGVPGTAMAAFGKQLNEV FT DLAAVITYERNAWGNDDGDMVTPKDVVAYKQKQQ*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: generation of precursor metabolites and FT energy [goid GO:0006091] [evidence ISS]; FT GO_process: oxidation reduction [goid GO:0055114] FT [evidence IEA]; FT " FT gene 128512..130104 FT /locus_tag="PA0106" FT /gene_synonym="coI" FT /name="coxA" FT CDS 128512..130104 FT /db_xref="GI:15595304" FT /function="Energy metabolism" FT /protein_id="NP_248796" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 2 (primary); Cytoplasmic Membrane, Class 3 (primary)" FT /product="cytochrome c oxidase, subunit I" FT /translation="MSAVIDTPDHHAGDHHHGPAKGLMRWVLTTNHKDIGTLYLWFSFM FT MFLLGGSMAMVIRAELFQPGLQIVEPAFFNQMTTMHGLIMVFGAVMPAFVGLANWMIPL FT MIGAPDMALPRMNNFSFWLLPAAFGLLVSTLFMPGGGPNFGWTFYAPLSTTFAPHSVTF FT FIFAIHLAGISSIMGAINVIATILNLRAPGMTLMKMPLFVWTWLITAFLLIAVMPVLAG FT VVTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGHPEVYIMILPAFGAVSAIIPTFAR FT KPLFGYTSMVYATASIAFLSFVVWAHHMFVVGIPVTGELFFMYATMLIAVPTGVKVFNW FT VTTMWEGSLTFETPMLFAVAFVILFTIGGFSGLMLAIAPADFQYHDTYFVVAHFHYVLV FT PGAIFGIFASAYYWLPKWTGHMYDETLGKLHFWMSFIGMNLAFFPMHFVGLAGMPRRIP FT DYNLQFADFNMVSSIGAFMFGTTQLLFLFIVIKCIRGGKPAPAKPWDGAEGLEWSIPSP FT APYHTFSTPPEVK*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: generation of precursor metabolites and FT energy [goid GO:0006091] [evidence ISS]; FT GO_process: oxidation reduction [goid GO:0055114] FT [evidence IEA]; FT " FT gene 130115..130669 FT /locus_tag="PA0107" FT CDS 130115..130669 FT /db_xref="GI:15595305" FT /function="Energy metabolism" FT /protein_id="NP_248797" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="conserved hypothetical protein" FT /translation="MSDAKVDTRRLVGRLLLVTVLMFAFGFALVPLYDVMCRALGINGK FT TAGSAYSGEQQVDVGREVKVQFMTSNNIDMVWEFRSAGDQLVVHPGAVNQMVFYARNPS FT DKPMTAQAIPSIAPAEAAAYFHKTECFCFTQQVLQPGESIEMPVRFIVDRDLPKDVRHV FT TLAYTLFDITARKPPVPVAGR*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 130680..131567 FT /locus_tag="PA0108" FT /name="coIII" FT CDS 130680..131567 FT /db_xref="GI:15595306" FT /function="Energy metabolism" FT /protein_id="NP_248798" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 2 (primary); Cytoplasmic Membrane, Class 3 (primary)" FT /product="cytochrome c oxidase, subunit III" FT /translation="MASHEHYYVPAQSKWPIIASIGLLVTVFGLGTWFNDLTAGHKESH FT GPWIFFVGGLIIAYMLFGWFGNVIRESRAGLYSAQMDRSFRWGMSWFIFSEVMFFAAFF FT GALFYVRHFAGPWLGGEGAKGVAHMLWPNFQYSWPLLQTPDPKLFPPPSAVIEPWKLPL FT INTILLVTSSFTVTFAHHALKKNKRGPLKAWLALTVLLGIAFLILQAEEYVHAYNELGL FT TLGAGIYGSTFFMLTGFHGAHVTLGALILGIMLIRILRGHFDAEHHFGFEAASWYWHFV FT DVVWIGLFIFVYVI*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_function: catalase activity [goid GO:0004096] FT [evidence ISS]; FT GO_process: generation of precursor metabolites and energy FT [goid GO:0006091] [evidence ISS]; FT GO_process: oxidation reduction [goid GO:0055114] FT [evidence IEA]; FT " FT gene complement(131583..131792) FT /locus_tag="PA0109" FT CDS complement(131583..131792) FT /db_xref="GI:15595307" FT /function="Membrane proteins" FT /protein_id="NP_248799" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="hypothetical protein" FT /translation="MLKVAIVLLLLATLVSLFSGLFFLVKDQGHGSRVVNSLTVRVVLA FT AATLVLVAWGFYSGELNSHAPWHF*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 131808..132602 FT /locus_tag="PA0110" FT CDS 131808..132602 FT /db_xref="GI:15595308" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248800" FT /localization_and_confidence="Outer Membrane, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="MGGFMQYSQRLGEAGRNDRRSMRGAFRPGLLPTLVVLGLLPVLLW FT LGTWQLQRADEKRALLASYEARRGAEPVSPGQLEGLRDPAYVRVRLHGRFDERHTLLLD FT NRLRNGQAGVEVLQPFYDQASGLWLLVNRGWVAWTDRRSPPTLETPDRVLLLDAWTYLP FT PPGGLHLADAPAGGWPRLVTQLDIPALWQAFGRAGLPWEIRLEPGDASFDTDWPLVSMP FT PERHTGYAVQWFALATALLALYLYLGVRRAREKNHESRDSDA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 132577..133155 FT /locus_tag="PA0111" FT CDS 132577..133155 FT /db_xref="GI:15595309" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248801" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MSLAIPMPERPRRARGRLQLLAIIGLVVGPMLLASAMYKWNFWVP FT QGRSYSGALIGNGQTPADLGVQGRSQGEQWQLLVTAPGTCGEDCQQLVYLARQINIALG FT REASRAGHALAASGELPADFANLVRQDYPRLQRYGLDPALYDKAGGGERPLLWVVDPHG FT NLVLRYDAKANGKKLLKDVQLLLKLSHIG*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 133220..134293 FT /locus_tag="PA0112" FT CDS 133220..134293 FT /db_xref="GI:15595310" FT /function="Membrane proteins" FT /protein_id="NP_248802" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="hypothetical protein" FT /translation="MSGATRKPGFTVAVLATLLAAVVVLLGAYTRLTHAGLGCPDWPGC FT YGFVHVPLSEAQLAHAELHFPDAPVEAQKGWNEMIHRYFAGALGLLILGLALHALVRRG FT RDGQPLKLPLLLLAVVIAQAAFGMWTVTLKLWPQVVTAHLLGGFTTLALLFLLALRLSG FT RFAARRYPAATRGLAGLALLLVIGQIALGGWVSSNYAAVACIDLPTCHGEWWPRMDFAN FT GFHLTQHIGPNYLGGQLDSDARTAIHMTHRIGALCVTLVLLLLAWRLQRSGLVWPTALM FT LLGLSLQIGLGISNVLLHLPLPVAVAHNGGGALLLLSLVLVNYRLRAPASVRAPAPSPQ FT RVRRTLPPAQGSRLKAA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 134319..135233 FT /locus_tag="PA0113" FT CDS 134319..135233 FT /db_xref="GI:15595311" FT /function="Energy metabolism" FT /protein_id="NP_248803" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 2 (primary); Cytoplasmic Membrane, Class 3 (primary)" FT /product="probable cytochrome c oxidase assembly factor" FT /translation="MATVIDRHSQPTWRDFLELTKPKVVVLMLITSLIGMLLATKAPLD FT GFVPWQVLIFGNLGIGLCAGAAAAVNHVVDRRIDSIMARTHKRPLAEGRVSPSMALGFA FT LLLALAGMAVLLAFTNPLTAWLTLASLLGYAALYTGFLKRATPQNIVIGGLAGAAPPLL FT GWVAITGHLSAEPLLLVLIIFAWTPPHFWALCIHRKDEYAKADIPMLPVTHGERYTKLH FT ILLYTLVLFAVSLMPFVIHMSGLVYLLCALALGARFLDWAWALYCDSRPHAAIKTFKYS FT IVYLFLLFMALLVDHYLPLKLLL*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_function: protoheme IX farnesyltransferase FT activity [goid GO:0008495] [evidence IEA]; FT " FT gene 135259..135894 FT /locus_tag="PA0114" FT /name="senC" FT CDS 135259..135894 FT /db_xref="GI:15595312" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248804" FT /localization_and_confidence="Outer Membrane Vesicle, FT Class 1 (secondary); Cytoplasmic Membrane, Class 3 FT (primary)" FT /product="SenC" FT /translation="MTRVNKTVLVLVALVALVLGLTVHKVLTAQRQADPTVLLDAGIVI FT LPQTRKVPALEFTNQDGQAVSTASLKGRWHLLFFGYTFCPDVCPTTLAQLRELQGKLPQ FT EVRDDLQVVFVSVDPNRDTPQQIKQYLGYFNAGFQGLTGTPENIQKLANAMSIPYIPAD FT TSKPNYTVDHSGNLVIIGPDGEQHGFIRAPLNNAKLEAQLPGVLKPQA*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT gene complement(135934..136386) FT /locus_tag="PA0115" FT /gene_synonym="elaA" FT CDS complement(135934..136386) FT /db_xref="GI:15595313" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248805" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="conserved hypothetical protein" FT /translation="MSLDWTCKHHADLTLKELYALLQLRTEVFVVEQKCPYQEVDGLDL FT VGDTHHLMAWRDGQLLAYLRLLDPVRHEGQVVIGRVVSSSAARGQGLGHQLMERALQAA FT ERLWLDTPVYLSAQAHLQAYYGRYGFVAVTEVYLEDDIPHIGMRRA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_process: ribosome biogenesis [goid GO:0042254] FT [evidence IEA]; FT " FT gene 136518..136991 FT /locus_tag="PA0116" FT CDS 136518..136991 FT /db_xref="GI:15595314" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248806" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="MRWEELSEQPCSLARVLAILGDRWTLLVLRDCFLGVRRFDDFERS FT LGVTRHVLADRLKRLVEAEILAKVPYQERPLREEYRLTEKGMELYPAILSLVNWGDRHL FT AGVEGPPLEHVHKHCGQHMHGVLVCSECGEPLHARDVTVREGLFWKGRLLRRG*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 137248..137976 FT /locus_tag="PA0117" FT CDS 137248..137976 FT /db_xref="GI:15595315" FT /function="Putative enzymes" FT /protein_id="NP_248807" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable short chain dehydrogenase" FT /translation="MTQRKAVLVMGAGDATGGAIARRFAREGYVACVARRNAEKLEPLV FT QAIRDQGGEALACGCDARQEQQVIDLFARIEGEVGALEAVIFNVGANVWFPITETTERV FT YRKVWEMAAFGGFLTGREAARVMLPRQRGTIIFTGATASLRGRAHFAAFSGAKFALRAL FT AQSMARELGPKDIHVAHPIIDGAIDTDFIRETLPELYKRKEQDGILDPEHIAETYWQIH FT CQPRDCWVHELDLRPWMETF*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene 138001..138588 FT /locus_tag="PA0118" FT CDS 138001..138588 FT /db_xref="GI:15595316" FT /function="Putative enzymes" FT /protein_id="NP_248808" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MSKQIEFFFDFGSPTTYLAWTQLPRIAAAHGASIAWRPMLLGGVF FT KATGNHSPIEVPAKGRYTLHDLARYAKRYGVPLAFNPAFPINTLTLMRGAQGYLGGEGF FT QPYLKAVFEALWVRQQNLGKPEVVAQVLAEAGFDPDEFLRLVGDEQVKEGLKATTEEAV FT RRGVFGAPSFFVGDQLFFGQDRLDFVAEVLAG*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 138818..140167 FT /locus_tag="PA0119" FT CDS 138818..140167 FT /db_xref="GI:15595317" FT /function="Transport of small molecules" FT /protein_id="NP_248809" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 2 (primary); Cytoplasmic Membrane, Class 3 (primary)" FT /product="probable dicarboxylate transporter" FT /translation="METPAMFIKRCSRSIFLQVVIGLVIGVICGVGIPDLAVQMKPLGD FT GFIKLIKMLIALIVFCVVVNGISGAGDLKKVGRIGLKSVIYFEILTTIALVLGLVVAYS FT LGLGSGANIHLNELPAGDVALYTGRTQEIHGPVAFLMGLIPTSVFSAFAENDILQVLLF FT SVLFGSALNLVGEQASGVARLINEFSHIVFRIMGMIVRLAPLGVFGAVAFTTARYGVDS FT LSHLGALVLVFYATCLVFVMAVLGSVLRLSGVRMLPFLRYFREELLIVMGTASSDAVLP FT QVMRKLEHMGIRSSTVGLVIPTGYSFNLDGFSIYLTLAVVFIAHVTGTPLAMTDLITIL FT LVSLVTSKGAHGIPGSALVILAATLTAVPAIPVAGLVLVLSVDWFMGIGRALTNLIGNC FT VATVTIARWENDIDMPRAQAILDGRLEAPAKADGEPLKRSAVAGEGKLHG*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene 140216..140902 FT /locus_tag="PA0120" FT CDS 140216..140902 FT /db_xref="GI:15595318" FT /function="Transcriptional regulators" FT /protein_id="NP_248810" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable transcriptional regulator" FT /translation="MFSSSKLVNAVAQRLLDTIEQGRWVAGQMLPGQRELAEQMEISRP FT SLREAIMVLETLGVVRSLPGKGVMVLERSEPLREVAAPGEATMEDVLQLRYALEPFIVG FT IVAQSAGAAEISELRLLLLDLREAVEDGDPQALVEAYTAFHRRLVKLTSNPIFLSVSEQ FT IGSALERSDNLVRRQPEYAEEILQEHDAILRAIRQHDSERASQAMRQHILNEGARLNID FT LRLPQV*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene 141003..141737 FT /locus_tag="PA0121" FT CDS 141003..141737 FT /db_xref="GI:15595319" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248811" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="MVGFEARTQQGAALRPTSHFVYESIYTAILEKRLAPAAKLSKETL FT GQIFRVSNGTIQRALTRLAEDGAVVMPPKEVASVARPDERQARQVLDARLLVESEVVRQ FT LPAGLDPAALAELRALVDEEQACLAARDSAGLIRLAGRFHLRLAELTENPLLQGFVRGL FT VARASLDIALNKGAVYTAEACAAQRALLDALEDGDSAAAAALMDAYLRGLFARMRFLPP FT PTTDLREAFGMKAPSGEKRRRA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT CDS 141917..142327 FT /db_xref="GI:15595320" FT /function="Adaptation, Protection" FT /protein_id="NP_248812" FT /localization_and_confidence="Extracellular, Class 3 FT (primary)" FT /product="rahU" FT /translation="MAYAEWIAVKVVVSKSIGTVGIRNATLQWGKFYRYTNKDDEISTE FT EVSSMNVQAGSPQWIASCGRENASSGTQGSFDCYDGNTKMGTFSWDDPWKSGATNTWSF FT TPASADYAGITSGGNATGTDIGEVTLTLGRFS*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT gene 141917..142327 FT /locus_tag="PA0122" FT /name="rahU" FT gene complement(142359..143267) FT /locus_tag="PA0123" FT CDS complement(142359..143267) FT /db_xref="GI:15595321" FT /function="Transcriptional regulators" FT /protein_id="NP_248813" FT /localization_and_confidence="Unknown, Class 3 (primary); FT Unknown (This protein may have multiple localization FT sites), Class 3 (primary)" FT /product="probable transcriptional regulator" FT /translation="MDSLKGMAIFATVVDKGSMAAAAQSLGMTPSAVSQQIRKLESRAQ FT VTLLHRTTRRLTLTEAGEAFYRSCAQMLAIAEEAERRLGEWRDAPVGELRLAAPVGFSG FT TLITQALKPLLENHRQLRLQLFFQDERIDLVAERIDLAIRVGNLADSSLVARHLGDWSS FT VLCAAPAYLRQRAPINRPEQLTEVDWISLNTSNHLNHLTLSGPGGEVCKLRLEPRVAAN FT GMLAVRQFTLDGLGVSYQPLPEVRDALNDGRLQQLLPEWRIPGLGIYAVTPRREAQPAK FT VKVAIEALRRAFATDGDERWS*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene complement(143567..143848) FT /locus_tag="PA0124" FT CDS complement(143567..143848) FT /db_xref="GI:15595322" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248814" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MSLKWTRKAAADLDAIYDHYVVLIGPEKALKAVQDIVEQVKPLQQ FT VANQGAGRPSEVPGVRTLTLERWPFSAPFRVKGKEIQILRIDRVEITP*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(143845..144072) FT /locus_tag="PA0125" FT CDS complement(143845..144072) FT /db_xref="GI:15595323" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248815" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MSTVVSFRADDALVAALDELARATHRDRPYHLRQALAQYLERQQW FT QVAAIDEGLADANAGRLLEHIEIEKRWGLQ*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(144248..144868) FT /locus_tag="PA0126" FT CDS complement(144248..144868) FT /db_xref="GI:15595324" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248816" FT /localization_and_confidence="Outer Membrane Vesicle, FT Class 1 (secondary); Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MPTRVLRGLVAALPLFLAACSDSAPSSEEIARLLAERGFDKPACA FT SSTLFKTFPVTLSDSFSGPGPAKGNAAVYDALVGVGLLRRDGDSYDLTPAGREDYKPES FT KAFCYSSGFDVSVRSVDPAKPDDYGPAVEKGWLVTVEVKPREVKDWAKNPEVLKQASLT FT TLQQITQPQVGQVSLVKPRGEEGYKLVNTRFSPRQGFHFNQAW*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 144969..145469 FT /locus_tag="PA0127" FT CDS 144969..145469 FT /db_xref="GI:15595325" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248817" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MRLPANLGRLLPALCLGVLLSACSTFGQRDPLRIDLVGLEPLPGQ FT GMEMRFMVKLRVQNPNDEPIEYNGIALDLDVNGQPLASGVSDQTGEVPRFGERVVSVPL FT TVSAFSAFRQAWGLSNNAPTQGMPYVVKGKLAGGLFGTVRFSEKGTLDFSGPAVGAPKT FT KGL*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 145542..145883 FT /locus_tag="PA0128" FT /gene_synonym="phnA" FT CDS 145542..145883 FT /db_xref="GI:15595326" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248818" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="conserved hypothetical protein" FT /translation="VSTLPPCPQCNSEYTYEDGALLVCPECAHEWSPNEAATASDDGKV FT IKDSVGNVLQDGDTITVIKDLKVKGSSLVVKVGTKVKNIRLVDGDHDIDCKIDGIGAMK FT LKSEFVRKV*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT CDS complement(145965..147392) FT /db_xref="GI:15595327" FT /function="Transport of small molecules; Carbon compound FT catabolism" FT /protein_id="NP_248819" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 2 (primary); Cytoplasmic Membrane, Class 3 (primary)" FT /product="Amino acid permease" FT /translation="MSKVVLASQLPNKRNASLAPGLKQRHVTMLSIAGVIGAGLFVGSG FT HAIAAAGPAALLAYLIAGTLVVLVMRMLGEMAVASPDTGSFSTYADRSIGRWAGFTIGW FT LYWWFWVLVIPLEAIAAAAILNAWFPAIDTWIFALAVTFLLTVTNLFSVARYGEFEFWF FT ALLKVIAIIAFIVLGAVAIVGGLPEREVSGLSSLMASHGGFVPNGYGAVLGALLTTMFS FT FMGTEIVTIAAAESKDPAKQITRATNSVIWRIGLFYLVSIFIVISIVPWNDPLLIQVGS FT YQRALELLDIPHAKLIVDLVVLVAVASCLNSAIYTSSRMVFSLAKRGDAPSVLKLTNTA FT HVPRPAVLASTAVGFLTTIVNYFAPEKVFTFLLASSGAVALLVYLVIAVAQLRMRKQLQ FT ASGQPIEFRMWLYPWLTWAVILFIVAALSIMLIMPEHRHEVFATALLTIFTVCLGLLNA FT RRKPRLGEDYAGKTARV*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT /note="GO_function: gamma-aminobutyric acid:hydrogen FT symporter activity [goid GO:0015495] [evidence IEA]; FT GO_process: polyamine catabolic process [goid GO:0006598] FT [evidence IDA]; FT GO_process: spermidine catabolic process [goid GO:0046203] FT [evidence IDA]; FT " FT gene complement(145965..147392) FT /locus_tag="PA0129" FT /name="bauD" FT CDS complement(147561..149054) FT /db_xref="GI:15595328" FT /function="Putative enzymes; Carbon compound catabolism" FT /protein_id="NP_248820" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="3-Oxopropanoate dehydrogenase" FT /translation="MGTLHHLINGEMVADNGRSADVFNPSTGEAIHKVPLADGKTLQKA FT IDAARAAFPAWRNTPPAKRAQVLYRFKQLLEQNEARISKLISEEHGKTLEDAAGELKRG FT IENVEYACAAPEILKGEYSRNVGPNIDAWSDFQPIGVVAGITPFNFPAMVPLWMYPLAI FT ACGNTFILKPSERDPSSTLLIAELFHEAGLPKGVLNVVHGDKEAVDGLLQAPEVKAISF FT VGSTPIAEYIYAEGTKRGKRVQALGGAKNHAVLMPDADLDNAVSALMGAAYGSCGERCM FT AISVAVCVGDQVADALIAKLVPQIKALKIGAGTSCGLDMGPLVTAAAQAKVTGYIDSGV FT AQGAELVVDGRGYQVAGHENGFFLGGSLFDRVTPEMTIYKEEIFGPVLCVVRVNSLEEA FT MQLINDHEYGNGTCIFTRDGEAARLFCDEIEVGMVGVNVPLPVPVAYHSFGGWKRSLFG FT DLHAYGPDGVRFYTRRKAITQRWPQRASHEASQFAFPSL*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT /note="GO_process: valine catabolic process [goid FT GO:0006574] [evidence IEA]; FT GO_process: polyamine catabolic process [goid GO:0006598] FT [evidence IDA]; FT GO_process: spermidine catabolic process [goid GO:0046203] FT [evidence IDA]; FT " FT gene complement(147561..149054) FT /locus_tag="PA0130" FT /name="bauC" FT CDS complement(149138..149425) FT /db_xref="GI:15595329" FT /function="Carbon compound catabolism" FT /protein_id="NP_248821" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MSGRPQAVPTVQVDNAEVIVTEWRFAPGAETGRHRHGHDYVVVPL FT TDGTLLLETPEGDRHAPLVAGQAYFRKAGVEHNVINASAHEVVFVETEIK*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT /note="GO_process: polyamine catabolic process [goid FT GO:0006598] [evidence IDA]; FT GO_process: spermidine catabolic process [goid GO:0046203] FT [evidence IDA]; FT " FT gene complement(149138..149425) FT /locus_tag="PA0131" FT /name="bauB" FT CDS complement(149425..150771) FT /function="Amino acid biosynthesis and metabolism; Carbon FT compound catabolism" FT /product_synonym="omega-amino acid--pyruvate transaminase" FT /protein_id="NP_248822" FT /note="GO_function: phosphoribosylglycinamide FT formyltransferase activity [goid GO:0004644] [evidence FT ISS]; FT GO_process: amino acid metabolic process [goid GO:0006520] FT [evidence ISS]; FT GO_process: polyamine catabolic process [goid GO:0006598] FT [evidence IDA]; FT GO_process: spermidine catabolic process [goid GO:0046203] FT [evidence IDA]; FT " FT /db_xref="GI:15595330" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="Beta-alanine:pyruvate transaminase" FT /translation="MNQPLNVAPPVSSELNLRAHWMPFSANRNFQKDPRIIVAAEGSWL FT TDDKGRKVYDSLSGLWTCGAGHSRKEIQEAVARQLGTLDYSPGFQYGHPLSFQLAEKIA FT GLLPGELNHVFFTGSGSECADTSIKMARAYWRLKGQPQKTKLIGRARGYHGVNVAGTSL FT GGIGGNRKMFGQLMDVDHLPHTLQPGMAFTRGMAQTGGVELANELLKLIELHDASNIAA FT VIVEPMSGSAGVLVPPVGYLQRLREICDQHNILLIFDEVITAFGRLGTYSGAEYFGVTP FT DLMNVAKQVTNGAVPMGAVIASSEIYDTFMNQALPEHAVEFSHGYTYSAHPVACAAGLA FT ALDILARDNLVQQSAELAPHFEKGLHGLQGAKNVIDIRNCGLAGAIQIAPRDGDPTVRP FT FEAGMKLWQQGFYVRFGGDTLQFGPTFNARPEELDRLFDAVGEALNGIA*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT gene complement(149425..150771) FT /locus_tag="PA0132" FT /gene_synonym="oapT" FT /name="bauA" FT CDS 150906..151823 FT /db_xref="GI:15595331" FT /function="Transcriptional regulators; Carbon compound FT catabolism" FT /protein_id="NP_248823" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="BauR" FT /translation="MAKSRNPSLGQVSDFDIRLLRIFKTIVECGSFSAAESTLGLSRSA FT ISLHMGDLEKRLGMRLCQRGRAGFALTDEGREVYRATQTLLAALEGFRAEVNDLHQHLR FT GELNIGIINNLVTLPQMRITHALSALKGQGPQVRINIGMTTPNEIELGVLDGHLHVGVV FT PLISPLSGLEYLPLYDEHAQLYCSRGHALFERADGDIAVDEVLAADAVAPSYRLPAEAQ FT ARHQELNNSASASDREGMAFLILTGNFIGYLPSHYAADWVAAGMLRPLLPERFHYAIAL FT TIVTRKGRRPNLVLERFLEAVAVS*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT /note="GO_process: positive regulation of transcription, FT DNA-dependent [goid GO:0045893] [evidence IEA]; FT GO_process: polyamine catabolic process [goid GO:0006598] FT [evidence IDA]; FT GO_process: spermidine catabolic process [goid GO:0046203] FT [evidence IDA]; FT " FT gene 150906..151823 FT /locus_tag="PA0133" FT /name="bauR" FT gene complement(151936..153306) FT /locus_tag="PA0134" FT /gene_synonym="gda2" FT CDS complement(151936..153306) FT /db_xref="GI:15595332" FT /function="Nucleotide biosynthesis and metabolism" FT /protein_id="NP_248824" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable guanine deaminase" FT /translation="MNDAVPAGNFVPPLILHSDHGGSAMSSSAHRGRILHFLGDPAKLG FT DKAWEYFEDGLLWIEHGHVRALDHATYLLPQLPADLPLEEHPQRLLLPGFVDCHVHYPQ FT LGVIASYGTQLLDWLETHTFPAEQRFADAGYAAAQAELFLDELLRHGTTTALVFGTVHA FT VSAEAFFQAAQKRRLRMIAGKVLMDRNAPPALCDTAASGYAESRALIERWHGNGRLQYA FT VTPRFAPTSSPEQLAAAARLLDEYPGVYLHTHLSENLKEVAWVGELFPQAQDYLDVYHR FT AGLVGERSVFAHGIHLSERECRCLAHKNAALAHCPSSNLFIGSGLFDLGRAQQYGIRVG FT IGSDVGGGTSLSLLANLADAYKIQQLRGTSLDPFQALYLATLGGARALDLDGLVGNFLP FT GREADFVALDLAATPMIAQRMEHARGLADTLFVLNTLGDDRAVAETWVMGERRHVKG*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_function: guanine deaminase activity [goid FT GO:0008892] [evidence IEA]; FT " FT gene 153696..153836 FT /locus_tag="PA0135" FT CDS 153696..153836 FT /db_xref="GI:15595333" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248825" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="VECATTVHRETVDSGSTHGAAEHASVDRRGLSWKAGKPSIHGHHG FT V*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 154417..155988 FT /locus_tag="PA0136" FT CDS 154417..155988 FT /db_xref="GI:15595334" FT /function="Transport of small molecules" FT /protein_id="NP_248826" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 2 (primary); Cytoplasmic Membrane, Class 3 (primary)" FT /product="probable ATP-binding component of ABC FT transporter" FT /translation="MSAPSSFAPPRLELRGISKRYPGCLANDRIDLCIDAGEIHALLGE FT NGAGKSTLMKIIYGVTRPDAGEIRWQGEPVQVRDPARARALGIGMVFQHFSLFETLSVA FT ENIALALGAEAGSPRRLEARIREVSQRYGMPLEPRRLVHGLSIGERQRVEIVRCLMQDI FT RLLILDEPTSVLTPREAEDLFVTLRRLAEEGCSVLFISHKLAEVRALCQRATVLRGGRV FT AGQCVPAQCSDLELARLMVGDAEGLAAEYPKVTGGAPFLQVRDLHWRNPDPFGVSFAGL FT DLEVRSGEILGIAGVAGNGQDELLALLSGEVRLPRAQAERIRLGGCAGAHLAPDARRRA FT GQAFVPAERLGHGAVPEMSLADNALLTAFQQGLVKRGLVRRRKVLALAEEIIRRFAVKA FT PGAGAPARSLSGGNLQKFILGREILQAPRLLVAAHPTWGVDVGAAALIHRALIALRDAG FT TAILVVSEDLDELFLLSDRIAALCSGRLCPAVATASASPQKVGGWMAGQFEAPAAVAGA FT VAQGSL*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_component: ATP-binding cassette (ABC) FT transporter complex, substrate-binding subunit-containing FT [goid GO:0055052] [evidence IEA]; FT " FT gene 155988..157085 FT /locus_tag="PA0137" FT CDS 155988..157085 FT /db_xref="GI:15595335" FT /function="Membrane proteins; Transport of small FT molecules" FT /protein_id="NP_248827" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="probable permease of ABC transporter" FT /translation="MLLSLEPRGRQSRWMLLASPLLAGLLTLVCGALLFACLGHDPWQT FT LHTVLVQPLSDLYGLGELLVKAMPILLCALGLALAYQARVWNIGAEGQLLVGALAGSAV FT AIQLLDWQSRWALAWVLLAGTAAGALWAGFAAWLRTRFNANEILTTIMLNYIALNLLLY FT GVHGPLKDPDGFNFPQSALFGEASRLPALFEDSRVHLGALFGLLALAAVWVLAQRSFLG FT FQVRVLGLDRRAAGFVGFREKRLVWFVLLFSGALAGLAGVCEVAGPIGQLVPQVSPGYG FT YAAITVAFLGRLNPFGILCASLLMALLYLGGEAAQMSLNLPLALSGLFQGMMLFFLLAC FT DVLILYRPRLHGRWRKRPALRDALA*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_component: ATP-binding cassette (ABC) FT transporter complex, substrate-binding subunit-containing FT [goid GO:0055052] [evidence IEA]; FT " FT gene 157108..158034 FT /locus_tag="PA0138" FT CDS 157108..158034 FT /db_xref="GI:15595336" FT /function="Membrane proteins; Transport of small FT molecules" FT /protein_id="NP_248828" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="probable permease of ABC transporter" FT /translation="MDIDLLDNLLFAMVRTGTPLLLVALGELVCERSGVLNLGQEGMML FT FGAVIGFMVAFSSGSLWLGVLLAVLAGMLLAALFAGVALYLNANQVACGLALTIFGVGL FT ASFVGAAWVGKPLQGFAPLALPVLGELPLLGRMLFAQDALVYLSLALFAAVAWMLLRSR FT AGLVLQAVGENPDAASAMGLPVLRVRTLAVLFGGAMAGLAGAYLSLAYTPMWAENMTAG FT RGWIALALVVFASWRVLRVLLGAWLFGLASILHLVAQGVGLSIPANLLAMLPYAATILV FT LVLLSRDALRTRLYAPVSLGQPWKAGH*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_component: ATP-binding cassette (ABC) FT transporter complex, substrate-binding subunit-containing FT [goid GO:0055052] [evidence IEA]; FT " FT gene 158199..158762 FT /locus_tag="PA0139" FT /name="ahpC" FT CDS 158199..158762 FT /db_xref="GI:15595337" FT /function="Adaptation, Protection" FT /protein_id="NP_248829" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Outer Membrane Vesicle, Class 1 (secondary); FT Cytoplasmic, Class 3 (primary)" FT /product="alkyl hydroperoxide reductase subunit C" FT /translation="MSLINTQVQPFKVNAFHNGKFIEVTEESLKGKWSVLIFMPAAFTF FT NCPTEIEDAANNYGEFQKAGAEVYIVTTDTHFSHKVWHETSPAVGKAQFPLIGDPTHQL FT TNAFGVHIPEEGLALRGTFVINPEGVIKTVEIHSNEIARDVGETVRKLKAAQYTAAHPG FT EVCPAKWKEGEKTLAPSLDLVGKI*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: response to stimulus [goid GO:0050896] FT [evidence ISS]; FT GO_function: alkyl hydroperoxide reductase activity [goid FT GO:0008785] [evidence RCA]; FT GO_function: peroxiredoxin activity [goid GO:0051920] FT [evidence IEA]; FT " FT gene 158907..160472 FT /locus_tag="PA0140" FT /name="ahpF" FT CDS 158907..160472 FT /db_xref="GI:15595338" FT /function="Adaptation, Protection" FT /protein_id="NP_248830" FT /localization_and_confidence="Cytoplasmic, Class 2 FT (primary); Cytoplasmic Membrane, Class 3 (primary)" FT /product="alkyl hydroperoxide reductase subunit F" FT /translation="MLDANLKTQLKAYLEKVSQPFEIVASLDDSDKSRELLGLLQDIVG FT LTDKITLKTDGSDARKPSFSLNRPGADIGLRFAGIPMGHEFTSLVLALLQVGGHPSKLD FT ADVIEQVKGIEGTFEFETYFSLSCQNCPDVVQALNLMAVLNPNIRHVAIDGALFQDEVE FT ARQIMSVPSIYLNGEVFGQGRMGVEEILAKIDTGAAARDAEKLTARDAFDVLVVGGGPA FT GAAAAIYAARKGIRTGVAAERFGGQVLDTMAIENFISVQETEGPKLARALEEHVRHYEV FT DIMNLQRASKLVPAKNAGELHEVRFESGGSLKAKTLILATGARWREMGVPGEQEYKAKG FT VCFCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVAHVTLLEFDSKLRADAVLQRKL FT YSLPNVEVITSALTSEVKGDGQKVTGLVYKDRNSEEFKSIELEGIFVQIGLLPNTEWLK FT GSVELSPRGEIIVDARGETSLPGIFAAGDVTTVPYKQIVIAVGEGAKASLSAFDHLIRT FT SAPE*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: response to stimulus [goid GO:0050896] FT [evidence ISS]; FT GO_function: alkyl hydroperoxide reductase activity [goid FT GO:0008785] [evidence RCA]; FT GO_function: oxidoreductase activity, acting on sulfur FT group of donors, NAD or NADP as acceptor [goid GO:0016668] FT [evidence IEA]; FT " FT gene complement(160552..161448) FT /locus_tag="PA0141" FT CDS complement(160552..161448) FT /db_xref="GI:15595339" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248831" FT /localization_and_confidence="Outer Membrane Vesicle, FT Class 1 (secondary); Cytoplasmic, Class 3 (primary)" FT /product="conserved hypothetical protein" FT /translation="VALQVASAPHGSSEDSTSASLPANYPYHTRMRRNEYEKAKHDLQI FT ELLKVQSWVKETGQRVVVLFEGRDAAGKGGTIKRFMEHLNPRGARIVALEKPSSQEQGQ FT WYFQRYIQHLPTAGEMVFFDRSWYNRAGVERVMGFCSPLQYLEFMRQAPELERMLTNSG FT ILLFKYWFSVSREEQLRRFISRRDDPLKHWKLSPIDIKSLDKWDDYTAAKQAMFFHTDT FT ADAPWTVIKSDDKKRARLNCIRHFLHSLDYPDKDRRIAHEPDPLLVGPASRVIEEDEKV FT YAEAAAAPGHANLDIPA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_function: polyphosphate kinase activity [goid FT GO:0008976] [evidence IEA]; FT " FT gene 161906..163255 FT /locus_tag="PA0142" FT CDS 161906..163255 FT /db_xref="GI:15595340" FT /function="Putative enzymes" FT /protein_id="NP_248832" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="MSRTWIRNPLAIFTANGLDAAGGLVVEDGRIVELLGAGQQPAQPC FT ASQFDASRHVVLPGLVNTHHHFYQTLTRAWAPVVNQPLFPWLKTLYPVWARLTPEKLEL FT ATKVALAELLLSGCTTAADHHYLFPGGLEQAIDVQAGVVEELGMRAMLTRGSMSLGEKD FT GGLPPQQTVQEAETILADSERLIARYHQRGDGARVQIALAPCSPFSVTPEIMRASAEVA FT ARHDVRLHTHLAETLDEEDFCLQRFGLRTVDYLDSVGWLGPRTWLAHGIHFNAEEIRRL FT GEAGTGICHCPSSNMRLASGICPTVELEAAGAPIGLGVDGSASNDASNMILEARQALYL FT QRLRYGAERITPELALGWATRGSARLLGRSDIGELAPGKQADLALFKLDELRFSGSHDP FT LSALLLCAADRADRVMVGGAWRVVDGAVEGLDLAALIARHRAAASALIAG*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_function: guanine deaminase activity [goid FT GO:0008892] [evidence IEA]; FT " FT gene 163363..164415 FT /locus_tag="PA0143" FT /name="nuh" FT CDS 163363..164415 FT /function="Nucleotide biosynthesis and metabolism" FT /product_synonym="nucleoside hydrolase" FT /protein_id="NP_248833" FT /note="GO_process: nucleotide metabolic process [goid FT GO:0009117] [evidence IDA]; FT " FT /db_xref="GI:119167454" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Unknown, Class 3 (primary)" FT /product="purine nucleosidase Nuh" FT /translation="MSRAARPCNRFCSLLLGLALLMPASLPLSAAETVAPPSPRTLIID FT TDPGADDVIALLFAMASPKELKIQALTTVAGNVPLEKTARNARLAREWGKRPDIPVYAG FT APRPLLRTPIYAADVHGSEGISGVEVHEPKQPLAEGNAVDYLIRTLRAAPEKSVTLAML FT GPETNLALALTQAPDIVKGVREIVIMGGAHFNGGNITPAAEFNIFADPHAAEIVLKSGA FT PITMLPLDVTHKILTSPERIAKLRNLGNQAGKTVADILDAYVQYDIKYYGLKGGPVHDA FT TVVAYLLKPSLFKGKRINVQVDSREGITFGQTVADWYGGLKQPANVEWINEGDAQGFFD FT LLTERIARLP*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT gene complement(164443..165069) FT /locus_tag="PA0144" FT CDS complement(164443..165069) FT /db_xref="GI:15595342" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248834" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MSRSNGSSSRRTFLRLAALLLPAGALLGSLPGVRAAARPRKLYLA FT GPDVFRADAVAHGEALKALCARYGFEGLYPLDNALPKQLAEPREQAAWIYRANIGLIER FT ADAVLANLNFFRGAEPDSGTAFEVGYATALGKPVYGYVDDAGSYAERIRRHAPELIGED FT PTRDRDGMTLEEFGLPLNLMLAVPATLVVGDAEQALRQLASRRHG*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(165219..165737) FT /locus_tag="PA0145" FT CDS complement(165219..165737) FT /db_xref="GI:15595343" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248835" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="MTAIYLAGPDVFRPDAEAHGETLKALCAEFGFVGLYPLDHALPAD FT IREPAAQAAWIYRANVGLIERADCVLANLEPFRGSEPDSGTAFEVGYALALGKPVYAYL FT SDAGAYAERLARLAPEWLGEHPGEDRDGWQLEGFGLPLNLMLAVPSRLVAGGPREALRR FT LAEELGGNA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 165976..167073 FT /locus_tag="PA0146" FT CDS 165976..167073 FT /db_xref="GI:15595344" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248836" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="conserved hypothetical protein" FT /translation="MKHRRTQSRMSVLRRLAAVLGLGACALAAEAAEPLKIGFVYVGPV FT GDHGWTYQHELGRRELVEHFGDKVKTSFVENVAEGADAERVIRNLAKDGYGLVFTTSFG FT YMNPTAKVARQFPKVTFEHATGYKRDRNLGTYLSRSYEGRYVGGFLAAKMTRSHKIGYI FT ASFPIPEVIRDINAIQLALDKYDPQAELKVMWVSTWFDPGKEADAANALIDQGVDVVFQ FT HTDSPAPIQAAERRGVYAVGYASDMQHFGPKTVLTSIVNDWGPHYIRSAQAVMDGTWKS FT EDFWGGLAESTVVLPLNQEVLPAPVREEAGRLIESIRSGAFHPFTGPIRDQSGKERFAA FT GVSATKADLASMNYYVEGIKADLPK*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 167146..168108 FT /locus_tag="PA0147" FT CDS 167146..168108 FT /db_xref="GI:15595345" FT /function="Putative enzymes" FT /protein_id="NP_248837" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable oxidoreductase" FT /translation="LDRLPIIDIAPLYGADRGAWNDVARRIDQACREWGFFYIAGHPLP FT AARFEALLAAAREFFALPVEEKLKIDITRSRNHRGYGAIATEQLDPALPSDFKETFDMA FT LHLPAEHPDVRAGKSFYGPNRHPDLPGWEALLEGHYADMLALARTVLRALAIALGIEED FT FFDRRFEQPVSVFRLIHYPPASARQSADQPGAGAHTDYGCVTLLYQDAAGGLQVQNRQG FT EWIDAPPIDGTFVVNIGDMMARWSNDRYRSTPHRVISPRGVHRYSMPFFAEPHMDTEIR FT CLPGCFDADNPPKYPPTTCGDWLTSRFAQTYAYRRGETA*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene 168213..169163 FT /locus_tag="PA0148" FT /gene_synonym="add" FT CDS 168213..169163 FT /db_xref="GI:15595346" FT /function="Nucleotide biosynthesis and metabolism" FT /protein_id="NP_248838" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="adenine deaminase" FT /translation="MYEWLNALPKAELHLHLEGTLEPELLFALAERNRIALPWNDVETL FT RKAYAFNNLQEFLDLYYAGADVLRTEQDFYDLTWAYLQKCKAQNVVHVEPFFDPQTHTD FT RGIPFEVVLAGIRAALRDGEKLLGIRHGLILSFLRHLSEEQAQKTLDQALPFRDAFIAV FT GLDSSEVGHPPSKFQRVFDRARSEGFLTVAHAGEEGPPEYIWEALDLLKVERIDHGVRA FT FEDERLMRRLIDEQIPLTVCPLSNTKLCVFDDMSQHTILDMLERGVKVTVNSDDPAYFG FT GYVTENFHALQQSLGMTEEQARRLAQNSLDARLVK*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_process: purine salvage [goid GO:0043101] FT [evidence IEA]; FT GO_function: adenine deaminase activity [goid GO:0000034] FT [evidence IDA]; FT " FT gene 169361..169906 FT /locus_tag="PA0149" FT CDS 169361..169906 FT /db_xref="GI:15595347" FT /function="Transcriptional regulators" FT /protein_id="NP_248839" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable sigma-70 factor, ECF subfamily" FT /translation="LPADGEAARRADLLKAFLAQRQRMESLVSRWVGCRATAADLVQEL FT FLRFWRRPAAPVEELGSYLLRSARNLAIDHLRGEGSRQRQLDDWLPEQRQGEPVGPEQA FT LEAGDQWRRVEAALRGLPERTRRIFLLNRIHGRTYAEIAQAMQLSQSAVEKHMMRALDA FT CKASLAGPAGEQARSAQP*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene 169903..170898 FT /locus_tag="PA0150" FT CDS 169903..170898 FT /db_xref="GI:15595348" FT /function="Membrane proteins; Transcriptional regulators" FT /protein_id="NP_248840" FT /localization_and_confidence="Periplasmic, Class 3 FT (primary)" FT /product="probable transmembrane sensor" FT /translation="MTRPDSDAAPYEPVLEQTAQAWLVRLRGTPDAATRRAFEDWLAQR FT PAHAEAYARAEALWRLTEIPASRLAIEEADALEAYLRPRRASRNPRRWAYPLASVACLL FT AMLWLGGWWQPGDWLQDWRADYVAAPGQVAEWKLADGSYLSLDAGSAVRVRIDGGQRRV FT ELLRGAAALRVKRDALPFVVEAGEGRARVLGTEFEVRRGAGATRVTVLQGRVAVSAGTG FT AGAAEEVLGAGQQVGFADGKLGRPVAIDAAAALAWRQGWLSFYRRPLAEVLDELARYYP FT GRILLLDDALGRQPVSGSFRSDDPEAALKSLQAVLGYRQQILFGRLVVIR*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene 171047..173434 FT /locus_tag="PA0151" FT CDS 171047..173434 FT /db_xref="GI:15595349" FT /function="Transport of small molecules" FT /protein_id="NP_248841" FT /localization_and_confidence="Outer Membrane, Class 2 FT (primary); Outer Membrane, Class 3 (primary)" FT /product="probable TonB-dependent receptor" FT /translation="MTPFPRFALRTLPALFLSLGCLAATVQAAEAVRYRFSQAAAPLAQ FT ALNAFSRASGQTLLYTAELPPQATAPALHGSLVAEEALQRLLQGSGLRARRIDERTLTL FT EPIPASGALDLDATTVSAAAPAQGYRPAANASISRGDAPVLEIPQAISVVPAQALQDQR FT PRNLDDALGNISGITQANTLGGTQDAVMKRGFGDNRDGSIMRDGMPSVQGRNFTATADH FT VEVLKGPASLLYGIQDPGGVVNVVSKKPQLQQANALTLRGSAYAHGRNGSGGQLDSTGP FT LGDSGLAYRMILDHEDEDYWRDFGKSRETLVAPSLAWYGEDTTVNLSYEHREFTTPFDR FT GTAIDPRTNRPLDIPRSRRLDEPFNITEGRSELTRLDLERQLDDTWKAHFGYGYSRETY FT DDNQARVMAVNADGTLTRRMDGTHGAVSSDSFTTLGLSGTLQLAGMQHDLQFGMDHEKR FT KIFRADLLRDSKTSRFDYLDPVYGQVVPSTRVVAGDSDQTDKLRSDSLYFQDSIHLDER FT WILVGGARYQIYDQLAGRGRPFNANTDINGQKWVPRGGLVYRLSDEVSLYGSYMRSFKP FT NSTIAPLSTGETIDSAILPEEATSWELGAKLDVPGRLSGTLALFDIRKKNVLVNELDGA FT GNSSVRAAGRVRSRGLELDLTGQLSERWSLIGSYAWLAAEVTEDPTLEGKRLQNVARNT FT ASLSAVYELGQLFGGDRLRLGGGARYVGKRPGDPANSFDLPSYTVADAFASYDTRFGGH FT GVKFQLNVKNLFDRTYYPSSANRLYVAMGEPRQFQVSTTVEF*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_component: outer membrane [goid GO:0019867] FT [evidence IEA]; FT " FT gene 173811..174638 FT /locus_tag="PA0152" FT /name="pcaQ" FT CDS 173811..174638 FT /db_xref="GI:15595350" FT /function="Carbon compound catabolism; Transcriptional FT regulators" FT /protein_id="NP_248842" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="transcriptional regulator PcaQ" FT /translation="VAVSQPAISKTLKELEEILGARLFERSKAGAELTEAGVTFLRYAG FT PCVQALRDGVNTLRGHEAQVETVRVGVLSTVESLVVPEVIRRLHRRHGALVVSVATGPS FT AYLLAQLKVGELDLVVGRMTDSPDIQGLTFEHLYSESMMLVVRPGHPLLAAPLGDLQRL FT AEFPLVLPLAGTTIRRHADSLFVQWGIALAGQRLETLSPTLSRSYVLRSEAIWVAPRDA FT VRLDVGNGELAELDLGIREPGGSVGLCHNAALPLPLGAQWFSAVLREVAAELH*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: cellular catabolic process [goid FT GO:0044248] [evidence ISS]; FT GO_process: carbon utilization by utilization of organic FT compounds [goid GO:0015978] [evidence ISS]; FT GO_function: transcription regulator activity [goid FT GO:0030528] [evidence ISS]; FT GO_process: positive regulation of transcription, DNA- FT dependent [goid GO:0045893] [evidence IEA]; FT " FT gene 174773..175492 FT /locus_tag="PA0153" FT /name="pcaH" FT CDS 174773..175492 FT /db_xref="GI:15595351" FT /function="Carbon compound catabolism" FT /protein_id="NP_248843" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="protocatechuate 3,4-dioxygenase, beta subunit" FT /translation="MHDAESRRFVIRDRNWHPKALTPDYKTSVPRSPSQALVSIPQSLS FT ETSGPDFSHLRLGRHDNDLLLNFDHGGLPQGERIIMFGRVFDQYGKPVPHTLVEMWQAN FT AGGRYRHKNDRYLAPLDPNFGGVGRTLTDSEGHYYFRTIKPGPYPWRNGPNDWRPAHIH FT VSVSGPAIAARLVTQMYFEGDPLIPKCPIIRTLADPEAAQSLIGRLDMSMANPMDCLAY FT RFDIVLRGQRKTFFENA*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: cellular catabolic process [goid FT GO:0044248] [evidence ISS]; FT GO_process: carbon utilization by utilization of organic FT compounds [goid GO:0015978] [evidence ISS]; FT GO_process: protocatechuate metabolic process [goid FT GO:0046278] [evidence IEA]; FT " FT gene 175503..176108 FT /locus_tag="PA0154" FT /name="pcaG" FT CDS 175503..176108 FT /db_xref="GI:15595352" FT /function="Carbon compound catabolism" FT /protein_id="NP_248844" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="protocatechuate 3,4-dioxygenase, alpha subunit" FT /translation="MSHELLRETPSQTAGPYVHIGLALAAAGNPTRDLEIWNRMAREGA FT RGQHILLLGHVYDGNGHLVRDSFLEFWQADSEGRYQERYDPERPFNSFGRTATTFDAGE FT WTLHTVKPGVVRNAQGVPMAPHINVSLFARGINIHLQTRLYFDDETEANAACPVLNLIE FT QAPRRDTLLAQRCEVDGQLAYRFDIRIQGDNETVFFDF*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: cellular catabolic process [goid FT GO:0044248] [evidence ISS]; FT GO_process: carbon utilization by utilization of organic FT compounds [goid GO:0015978] [evidence ISS]; FT GO_process: protocatechuate metabolic process [goid FT GO:0046278] [evidence IEA]; FT " FT gene 176315..177154 FT /locus_tag="PA0155" FT /name="pcaR" FT CDS 176315..177154 FT /db_xref="GI:15595353" FT /function="Carbon compound catabolism; Transcriptional FT regulators" FT /protein_id="NP_248845" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="transcriptional regulator PcaR" FT /translation="MSELPEHPATLAPPTVLSPAKRIEAFTGDPNFMTSLARGLAVIHA FT FQERKRHLTIAQISHRTEIPRAAVRRCLHTLMQLGYATTDGRTYSLLPKVLTLGHAYLS FT STPLAITAQPILDRLSEQLHEACSMATLEGDDVLYIARSATPQRLISVDLNVGSRLPAY FT CTSMGRILLAALDDDALHAYFGGVEMQAKTSRTLYTPETLLPCLVEIRRQGWCIVDQEL FT EVGLRSLAVPVRDSAGHVLAALNVGTHAGRVSRAELESRFLPLLLEASRELSARLFT*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: cellular catabolic process [goid FT GO:0044248] [evidence ISS]; FT GO_process: carbon utilization by utilization of organic FT compounds [goid GO:0015978] [evidence ISS]; FT GO_process: regulation of transcription, DNA-dependent FT [goid GO:0006355] [evidence ISS]; FT GO_function: transcription regulator activity [goid FT GO:0030528] [evidence ISS]; FT " FT gene 177307..178458 FT /locus_tag="PA0156" FT /gene_synonym="triA " FT /name="triA" FT CDS 177307..178458 FT /function="Membrane proteins; Antibiotic resistance and FT susceptibility" FT /product_synonym="probable RND efflux membrane fusion FT protein precursor; Resistance-Nodulation-Cell Division FT (RND) triclosan efflux membrane fusion protein, TriA FT efflux membrane fusion protein precursor)" FT /protein_id="NP_248846" FT /note="GO_process: transport [goid GO:0006810] [evidence FT IEA]; FT " FT /db_xref="GI:15595354" FT /localization_and_confidence="Unknown, Class 3 (primary); FT Unknown (This protein may have multiple localization FT sites), Class 3 (primary)" FT /product="Resistance-Nodulation-Cell Division (RND) FT triclosan efflux membrane fusion protein, TriA" FT /translation="MSDARGAFHSKGRWSRMALPAILCAGLLVGCGAEPPAEEHVRVLA FT QTVKMAEFASATSITGDIQARVQADQSFRVGGKIVERLVDVGDHVAAGQVLARLDPQDQ FT RSNVENAQAAVAAQQAQSKLADLNYQRQKALLPKGYTSQSEYDQALASVRSAQSSLKAA FT QAQLANARDLLSYTELRASDAGVITARQAEVGQVVQATVPIFTLARDGERDAVFNVYES FT LFSHDVDGQRITVSLLGKPEVTASGKVREITPTVDERSGTLKVKVGLDSVPAEMSLGSV FT VNASVAAPAEHSVVLPWSALSKVGEQPAVWLLDQQGKARLQPVRVARYASEKVVIDGGL FT EAGQTVVTVGGQLLHPGQVVEVAQPPQPTQSTASRDAVGGGQP*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT gene 178455..179525 FT /locus_tag="PA0157" FT /gene_synonym="triB " FT /name="triB" FT CDS 178455..179525 FT /function="Antibiotic resistance and susceptibility; FT Membrane proteins" FT /product_synonym="probable RND efflux membrane fusion FT protein precursor; Resistance-Nodulation-Cell Division FT (RND) triclosan efflux membrane fusion protein, TriB FT efflux membrane fusion protein precursor)" FT /protein_id="NP_248847" FT /note="GO_process: transport [goid GO:0006810] [evidence FT IEA]; FT " FT /db_xref="GI:15595355" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="Resistance-Nodulation-Cell Division (RND) FT triclosan efflux membrane fusion protein, TriB" FT /translation="MKPFSLAGLFGFALLLSGCGDEPPPAPPRPVLTVTVKTLKNDDLG FT RFAGSIQARYESVLGFRTNGRIASRLFDVGDFVGKGALLATLDPTDQQNQLRASQGDLA FT SAEAQLIDAQANARRQEELFARSVTAQARLDDARTRLKTSQASFDQAKAAVQQARDQLS FT YTRLVTDFDGVITTWHAEAGQVVSAGQAVVTLARPEVREAVFDLPTEVAESLPADARFL FT VSAQLDPQARTTGSIRELGPQADASTRTRRVRLSLAQTPEAFRLGSTIQVQLSSAGSVR FT SVLPASVLLERDGKTQVWVVDGKQSSVALREVQVLSRDERQVVIGQGLADGDRVVRAGV FT NSLKPGQKIKLDEDAR*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT gene 179522..182569 FT /locus_tag="PA0158" FT /gene_synonym="triC " FT /name="triC" FT CDS 179522..182569 FT /function="Antibiotic resistance and susceptibility; FT Transport of small molecules" FT /product_synonym="probable RND efflux transporter; FT Resistance-Nodulation-Cell Division (RND) triclosan efflux FT transporter, TriC efflux transporter)" FT /protein_id="NP_248848" FT /note="GO_function: metal ion:hydrogen antiporter activity FT [goid GO:0051139] [evidence IEA]; FT " FT /db_xref="GI:15595356" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 2 (primary); Cytoplasmic Membrane, Class 3 (primary)" FT /product="Resistance-Nodulation-Cell Division (RND) FT triclosan efflux transporter, TriC" FT /translation="MKGGFNLSDWALRHQSLVWYLMAVSLVMGVFSYLNLGREEDPSFA FT IKTMVIQTRWPGATVDDTLEQVTDRIEKKLEELDSLDYVKSYTRPGESTVFVYLKDTTK FT AGDIPDIWYQVRKKISDIQGEFPQGIQGPGFNDEFGDVFGSVYAFTADGLDFRQLRDYV FT EKVRLDIRSVKDLGKVQMIGAQNEVIYLNFSTRKLAALGLDQRQVVQSLQAQNAVTPSG FT VVEAGPERISVRTSGNFRSEKDLQAVNLRVNDRFYRLSDLASISRDFVDPPTSLFRYKG FT EPAIGLAVAMKEGGNILEFGEALNARMQEITGELPVGVGVHQVSNQAQVVKKAVGGFTR FT ALFEAVVIVLIVSFVSLGLRAGLVVACSIPLVLAMVFVFMEYTDITMQRVSLGALIIAL FT GLLVDDAMITVEMMITRLELGDSLHDSATYAYTSTAFPMLTGTLVTVAGFVPIGLNASS FT AGEYTFTLFAVIAVALLLSWIVAVLFAPVIAVHILPKTLKHKSEQKKGRIAERFDSLLH FT LAMRRRWTTIFLTALLFGVSLFLMKFVQHQFFPSSDRPELLVDLNLPQNSSIHETRAVM FT DRLEATLKDDEDIDHWSAYVGEGAIRFYLPLDQQLQNNFYGQLVIVTKDLEARERVAAR FT LRDRLRKDYVGISTYVQPLEMGPPVGRPIQYRVSGPQIDKVREYAMGLAGVLDGNPNIG FT DIVYDWNEPGKMLKIDIAQDKARQLGLSSEDVAQIMNSVVTGSAVTQVRDDIYLVNVIG FT RAEDSERGSLETLESLQIVTPSGTSIPLKAFAKVSYELEQPLVWRRDRKPTITVKASLR FT GEIQPTDLVARLAPEVKRFADGLPANYRIEVGGTVEESGKAEGPIAKVVPLMLFLMATF FT LMIQLQSVQKLFLVASVAPLGLIGVVAALLPTGTPMGFVAILGILALIGIIIRNSVILV FT TQIDAFEKDGKTPWEAVLEATHHRTRPILLTAAAASLGMIPIAREVFWGPMAYAMIGGI FT VAATLLTLIFLPALYVAWYRIPEPGR*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT gene 182768..183706 FT /locus_tag="PA0159" FT CDS 182768..183706 FT /db_xref="GI:15595357" FT /function="Transcriptional regulators" FT /protein_id="NP_248849" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable transcriptional regulator" FT /translation="VDTLQGMRVFARVVDSGSFTSAAQALDLSTAQVSRLISDLEAHLQ FT TRLLHRTTRRLALTEAGERYLERCRGILEDIEVAEAEAAGAHIRPCGRLRVQSLMGMGQ FT HHLVPMIARYGALFPDVVIELTLSQRNPDMLEEGQDVLITGERQLPDSEFVAQRLGSIH FT SVLCASPGYLQQHGVPRSVDDLERHVCLRLQDPAYPEGWIFADEQGERTVSPQNTFMVN FT VAEVMAQAAKADLGIALLPSYVAAAALRNGELLRVLPGHAMHQRTIYALYPSRRYLDAK FT IRTWVDLLQQELPQAFARDETTMQSSSYCAQ*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene 183822..184007 FT /locus_tag="PA0160" FT CDS 183822..184007 FT /db_xref="GI:15595358" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248850" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MNRQILAAAILSLFSLAFSQAGFAEESSLMTNRMVDANQQAIEHQ FT QELSASAAQAGARSDS*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 184287..184439 FT /locus_tag="PA0161" FT CDS 184287..184439 FT /db_xref="GI:15595359" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248851" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="VESLKPDESKRLSIEESDCVSAGFQCPEIHWQDFPTPNFDCSYST FT SSQGR*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 184594..185928 FT /locus_tag="PA0162" FT /gene_synonym="opdC " FT /name="opdC" FT CDS 184594..185928 FT /function="Membrane proteins; Transport of small FT molecules" FT /product_synonym="histidine porin OpdC " FT /protein_id="NP_248852" FT /db_xref="GI:15595360" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Outer Membrane Vesicle, Class 1 (secondary); FT Outer Membrane, Class 2 (primary); Outer Membrane, Class 3 FT (primary)" FT /product="histidine porin OpdC" FT /translation="MRNLFALTPMALALCTASAAWADEGEAKEGFIEGSSLQLLTRNYY FT FNHDRRHASGHDSKEWAQGFIATFQSGYTPGVVGFGVDAYGMLGLKLDGGGGTGGTSIL FT PITSPSKEGYESGKAPDEFSSGGAALKIRAFDTELKLGDQFLSNPVVAGGESRMLPQTF FT RGVSLTNNSFEDLTLTAGQVSFTKYYNQSGHRRLGSYYGELPGDRDSHHLSWLGGTWGG FT IEGFTSSLYAAELQNVWKQYYADVDYTYEIDDNWSLNPGAHYYKTVDSGDSLLGRIDNN FT TYSLHFAVGYRQHTVTAVLQKVNGNTPFDYINQGDSIFLDNSQQYSDFNGPNEKSWKLQ FT YDYDFVALGLPGLSASASYSRGKLDLTRVDPDSPGYGGWYSADGKNAKHWERDLDLQYV FT VQGGPAKDLSLRLRWATHRGTGGYSAVDNDIDEYRVIVDYPIDVF*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT gene complement(185957..186754) FT /locus_tag="PA0163" FT CDS complement(185957..186754) FT /db_xref="GI:15595361" FT /function="Transcriptional regulators" FT /protein_id="NP_248853" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable transcriptional regulator" FT /translation="MTMNGQPAELHRPIPTLARLPRPVYARAESLRAGSWTSRHRHAWV FT QLSYAISGVLGVHTAEGSFFAPPQRAIWIPAQLEHEVVTSTRAEMRSLYIRGDACAWAP FT TRCRVLEVTPLARELIKSFCELPVDYPEGDSAESRLVQVLLDQLRLLPEVAFSLPMPRE FT PRLLRLCQALIDEPTQSLTMGDWAQRLGTSEKTLSRLFQRETGMNYRLWRQRQRLLASL FT NALEAGDSVTGAALDSGYDSTSAYIAAFKGLFGFTPGELFRQR*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene 186832..188448 FT /locus_tag="PA0164" FT CDS 186832..188448 FT /db_xref="GI:15595362" FT /function="Amino acid biosynthesis and metabolism" FT /protein_id="NP_248854" FT /localization_and_confidence="Periplasmic, Class 2 FT (primary); Periplasmic, Class 3 (primary)" FT /product="probable gamma-glutamyltranspeptidase" FT /translation="MLDFSAHALPYASQRSPVHARRGMVATSQPQAAQVGLEILRRGGN FT AIDAAIATAAALTVVEPTGCGIGGDAFALVWTRGRLHGLDASGRAPGLLDRERVRAAGH FT ERMPLYGWTPVTVPGCPAAWGELSRRFGKLPFEQLLRPAIELARDGFPVSPVIARLWQS FT GLDKFRAALPQRPELRAWFDEFLIDGRAPRAGEVFRQPGQADTLDELARSQCESFYRGE FT LARAIVGHAECSGGYLRAEDLAGYQAKWVEPISLNYRGYDVWEIPPSGQGLIALMTLNI FT LKGFEFGERDCARTWHRQLEAMKLAYVDGLHYISQPQSMRVSVEELLHEDYAASRRALI FT GERALDPSPGQPRPGGTVYLACGDEEGNLVSFIQSNYHGFGSGVVVPGTGIALQNRGAE FT FSLDPDHVNCLEPGKQTFHTIIPGFLSKDGVPLGPFGVMGAYMQPQGHVQMVMNLVDFG FT LNPQAALDAPRWQWLGGLRVGIEHAAPRALAAELAQRGHQVEIAYDSTSYGRGQIVLRD FT PASGVLCGGTEPRTDSQIAVW*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_process: glutathione biosynthetic process [goid FT GO:0006750] [evidence IEA]; FT " FT gene 189120..189956 FT /locus_tag="PA0165" FT CDS 189120..189956 FT /db_xref="GI:15595363" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248855" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Outer Membrane Vesicle, Class 1 (secondary); FT Outer Membrane, Class 2 (primary); Outer Membrane, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="MSRTLATVMLAGGLLAAGQAVAEDHDMTPTHETDSGPLLWHNESL FT TYLYGKNFKINPPIQQTFTLEHASGWTWGDLFIFFDQINYNGKEDASNGKNTYYGEITP FT RLSFGKLTGADLSFGPVKDVLLAGTYEFGEGDTEAYLLGPGFDLAIPGFDYFQLNFYYR FT KPDGNRVRAGAWQITPVWSYTIPVGNSDILIDGYMDWVINNKSASTSRRNQSDYHANLH FT FNPQVKYDLGKALGYEPKHLYVGLEYDYWSDKYGVKDSQYFTTDQNTASFLVKYHF*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 190198..191604 FT /locus_tag="PA0166" FT CDS 190198..191604 FT /db_xref="GI:15595364" FT /function="Membrane proteins; Transport of small FT molecules" FT /protein_id="NP_248856" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 2 (primary); Cytoplasmic Membrane, Class 3 (primary)" FT /product="probable transporter" FT /translation="MHSEDQRPNDLIYGLDDRPRPLPAFLAALQHVLASFVGIVTPPLV FT IGSLLGLGEHLPYLISMALMVSGAGTLIQARRPFGIGAGMICLQGTSFAFLGAVLAAGM FT LVKQRGGGPEEILAMIFGVCFFGAFVQIVLSRFLGHLRRVITPLVTGIVITLIGVSLIK FT VGITDLGGGAGATDFGAPANLALGALVLLSIVLLNRSRLPWLRLAAIVIGLALGTLAAW FT ATGLFVPRALPELPLVSLPQPFRFGFAFDWMAFLPVALIYLISSIETVGDLTANCMLSR FT QPLEGPAYLQRLRGGVLGDGVSCLLAATFSAFPNTTFAQNNGVIQLTGVASRHVGIYIG FT GVLLALGLFPWVGAILQQIPKPVLGGATLVMFGSVAAAGIRILGQTAMDRRSVLIIAAS FT FGVGLGVAAQPTLLDQMPAVVKTLFDSAITSGGITAILLNLLLPEERVAEAAQASAKGG FT ALARWRKPLG*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_function: xanthine transmembrane transporter FT activity [goid GO:0042907] [evidence IEA]; FT " FT gene 191697..192362 FT /locus_tag="PA0167" FT CDS 191697..192362 FT /db_xref="GI:15595365" FT /function="Transcriptional regulators" FT /protein_id="NP_248857" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable transcriptional regulator" FT /translation="MTLTVPAHDPAARDKPAGRIRQKNEEAILAAAEEEFARHGFKGTS FT MNTIAQNVGLPKANLHYYFGNKLGLYTAVLSNILELWDSTFNTLGVDDDPAEALARYIR FT AKMEFSRRYPLASRIFAMEIISGGECLTAHFNQDYRSWFRGRAAVFEAWIAAGRMDPVD FT PVHLIFLLWGSTQHYADFASQIGLVTGRKRMSRQDFAAAADNLVRIILKGCGLTPPAA* FT " FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene 192368..192958 FT /locus_tag="PA0168" FT /gene_synonym="yigZ" FT CDS 192368..192958 FT /db_xref="GI:15595366" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248858" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="conserved hypothetical protein" FT /translation="MPSTLQGLAEYREEIRKSRFHTIAAPVADEDEAQAFIAAHRDASA FT GHNCWAWKCGAQYRFSDDGEPGGSAGRPILAAIEGQDMDCVAVLVSRWFGGIKLGTGGL FT ARAYGGGAAKCLQQAPRSELVERCRVRFACAFADHALLKARSLALGASVAAEDYGADGV FT VLTLELPVARFEALQALLVDLSRGQVRPQRLDA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT CDS complement(192965..193672) FT /db_xref="GI:15595367" FT /function="Motility & Attachment" FT /protein_id="NP_248859" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="SiaD" FT /translation="VRLERIARISDGFQSMAREQNLSLSERYHKQLRRLEKVARISDRY FT QQMMRDLNLALKEASIRDPLTGLPNRRMLLERLREENERSQRHGQSYVLAMLDVDFFKQ FT VNDTWGHDSGDRVLVEIARAMESELREYDLCGRWGGEEFLLLLPQTRLQDAGPVLERVR FT DSVRTLAVRVGTEALSVTASVGVTEHRIGETYSQTVNRADAALLDAKRSGRDKCVFAAL FT PPLPAPSRPAPAR*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT /note="GO_function: cyclase activity [goid GO:0009975] FT [evidence IEA]; FT " FT gene complement(192965..193672) FT /locus_tag="PA0169" FT /name="siaD" FT gene complement(193799..194179) FT /locus_tag="PA0170" FT CDS complement(193799..194179) FT /db_xref="GI:15595368" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248860" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="MSDLHIPGTQSTPAIQGDWQAGRLSMQGDSYPENSYELFGQVIDW FT VERFLADGQRPLELDLRLLYLNTSSIKAMMDILDLLEEAHQGGRPVSLRWHYDRRNERV FT AELAEEFREDCSFPFAIQAHDE*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(194206..194748) FT /locus_tag="PA0171" FT CDS complement(194206..194748) FT /db_xref="GI:15595369" FT /function="Motility & Attachment" FT /protein_id="NP_248861" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="METLDLLAMRESYTRQRILLCFNGPISRSLIEEIGHALRNYLHAE FT QAKPSEAMDVFAVYIEMTQNIRHYANLKGYGEHEAAATVAIARNEDGHYVVSAGNLVER FT DDGQSLVRSIQAIANLDKAALKAAYKEQLRRPRDSGCASGAGLGLLDIARKSSEPLAAS FT LKEQPDGRAFFSLRAVI*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT CDS complement(194757..196748) FT /db_xref="GI:15595370" FT /function="Motility & Attachment" FT /protein_id="NP_248862" FT /localization_and_confidence="Unknown, Class 3 (primary); FT Unknown (This protein may have multiple localization FT sites), Class 3 (primary)" FT /product="SiaA" FT /translation="MAANWGLRGKSVVALLLACALALVPAVLLGWRAMDDIRTHFGLAY FT AKNFTLLHRQKILAPVSRELALSRRFAESVVTRDWLLKEDDPARRALFFREAEGYRGDF FT RDHAYFIIASGSHHYYFNDGRQPYSERPRYTLEAGDPEDAWYFNTLRNSAAYNINVNVD FT SKLNLTKVWFNLVIRDQGRPIGLAGSGLDLSGFLDDFIIAREPGVTPMIVGDDGAIQAH FT PDRRLIAYSSAAGGASERHRVFDLLDQPEQRDALREAMRLARAKAGSVHCLWAGLDGRQ FT QLFAVAYIPQLRWYVLTAVDLHAAQVLDNRWLWPLAGTFLLLLVALLLGFAYAVERLLL FT RPLRSLKRSAKAIAAGRYDTPLPLARQDEIGSLSKAFASMADQVRRHTAELEDKVQERT FT QALEEANREMAAAQKKIGDSLDYASLIQRAILPDRQLSATLGEHHFILWKPRDVVGGDF FT YVYREQADGYLIGVVDCAGHGVPGALMTMLARAAIDHAIEAVGSRDPAAILGETDQAMR FT SMLSQEQIPQALATNMDAGLVWVDRRRRQLAFAGAKISLYASDGEEVQELKGARRAIGD FT KRRGDYRNIEVPLAPGWTFYLSTDGFLDQAGGEHGFGFGSRRFADMLRDHARQPLPEQA FT EAFVATLAEYQGEHPQRDDITILSFRFD*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT gene complement(194757..196748) FT /locus_tag="PA0172" FT /name="siaA" FT gene complement(197011..198060) FT /locus_tag="PA0173" FT CDS complement(197011..198060) FT /function="Adaptation, Protection; Chemotaxis" FT /product_synonym="response regulator for chemotaxis" FT /protein_id="NP_248863" FT /note="GO_process: regulation of sporulation resulting in FT formation of a cellular spore [goid GO:0042173] [evidence FT IEA]; FT " FT /db_xref="GI:15595371" FT /localization_and_confidence="Cytoplasmic, Class 2 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="probable methylesterase" FT /translation="MPISVLVVDDSALIRSLLKEIIQADPELRLVGCAPDAFVARDLIK FT QHAPDVISLDVEMPRMDGLTFLDKLMKARPTPVLMISSLTERGSEATLRALELGAVDFI FT AKPRLGIAEGMQAYAEEIRAKLKTVARARLRRRAADAPAPPESAAPLLSTEKIIALGAS FT TGGTEALKEVLLGLPAHSPGVVITQHMPPGFTRSFAERLDRLTRLSVSEARDGDRILPG FT HALVAPGDHHMEVQRSGANYVVRLNRQAQVNGHRPAVDVMFESLARCAGRNLLAGLLTG FT MGKDGARGLLAIRQAGGYTLAQDEATCVVYGMPREAVELGAAEDVLPLERIAAALLQQA FT ARRGSGNRL*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene complement(198080..198682) FT /locus_tag="PA0174" FT CDS complement(198080..198682) FT /db_xref="GI:15595372" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248864" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="conserved hypothetical protein" FT /translation="MNLQAREGAPLNRYYDPYFACDAVKLLPGEYFASGEDLVIVTVLG FT SCVSVCLRDPLNGIAGMNHFMLPERGLGGDPASPSARYGSHAMELLINRMLALGASRER FT LQAKVFGGGSVLRQISAAIGQRNVEFTLDYLATERIPLLASDVLEAFPRKIYFFPRNGR FT VLVKSLVELKNDTVLQRERDYRRRIDRNADGGPIDLF*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(198688..199530) FT /locus_tag="PA0175" FT /gene_synonym="cheR2" FT CDS complement(198688..199530) FT /db_xref="GI:15595373" FT /function="Transcriptional regulators; Adaptation, FT Protection; Chemotaxis" FT /protein_id="NP_248865" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable chemotaxis protein methyltransferase" FT /translation="MPTSTPSPVFGNQEFHYTREDFQQVRERLYRLTGISLAESKAQLV FT YSRLSRRLRLLRLGSFAEYFTHLDREPGEQQLFVNALTTNLTAFFRERHHFPLLADLAR FT RQLQRHRPLRIWSAAASTGEEPYSIAITLVEALGSFDPPVKIVASDIDTGVLDCARQGV FT YPLERLEQMPAPLKKRFFLRGTGPNAGKARVVEELRQLVEFRQINLLEADWSIAGELDA FT IFCRNVMIYFDKPTQTRLLERMVALLRPEGLFFAGHSENFVHASHLVRSVGQTVYSPA* FT " FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene complement(199600..201639) FT /locus_tag="PA0176" FT /name="aer2" FT CDS complement(199600..201639) FT /function="Adaptation, Protection; Chemotaxis" FT /product_synonym="methyl-accepting chemotaxis protein" FT /protein_id="NP_248866" FT /db_xref="GI:15595374" FT /localization_and_confidence="Cytoplasmic, Class 2 FT (primary); Unknown, Class 3 (primary); Unknown (This FT protein may have multiple localization sites), Class 3 FT (primary)" FT /product="aerotaxis transducer Aer2" FT /translation="MGLFNAHAVAQQRADRIATLLQSFADGQLDTAVGEAPAPGYERLY FT DSLRALQRQLREQRAELQQVESLEAGLAEMSRQHEAGWIDQTIPAERLEGRAARIAKGV FT NELVAAHIAVKMKVVSVVTAYGQGNFEPLMDRLPGKKAQITEAIDGVRERLRGAAEATS FT AQLATAAYNARIKSALDNVSANVMIADNDLNIIYMNRTVSEMLGRAEADIRKQLPNFDA FT GRLMGANIDVFHKNPAHQRHLLANLTGVHKAELNLGGRRFSLDVVPVFNDANERLGSAV FT QWTDRTEEHRAEQEVSQLVQAAAAGDFSKRVEEAGKEGFFLRLAKDLNSLVDTADRGLR FT DVSRMLGALAQGDLTQRIEADYQGTFGQLKDFSNDTAQSLSRMLGQIREAADTINTAAS FT EIASGNAELSARTEQQASSLEETASSMEELTSTVKLNAENARQANSLAANASEVATQGG FT TVVQKVVSTMSSINESARKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA FT GEVRTLAQRSAAAAKEIKTLISDSVDKVENGNTLVAQAGQTMSDIVVAIRRVTDIMSEI FT AAASAEQSTGIEEVNSAVSQMDDMTQQNAALVEEAAAAAEAMQEQAGLLNQSVAVFRLD FT TPPSVVQLASARPSAPRPSAPAPLARSGMARASKARKEDGWEEF*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT gene complement(201675..202160) FT /locus_tag="PA0177" FT CDS complement(201675..202160) FT /db_xref="GI:15595375" FT /function="Adaptation, Protection; Chemotaxis" FT /protein_id="NP_248867" FT /localization_and_confidence="Cytoplasmic, Class 2 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="probable purine-binding chemotaxis protein" FT /translation="MNGTEASQANGPAQEYLTFTLGREEYAIDILRVQEIRGYDQVTAI FT ANAPPFIKGVINLRGAIVPIVDLRIKFHLAEVTYDPFTVVIILNIGRRIVGVVVDSVSD FT VIALGGDAIRPPPEFGASFDTEYLLGLATAGERMLILVDIERLMTSREMALVDEAAA*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene complement(202147..204066) FT /locus_tag="PA0178" FT CDS complement(202147..204066) FT /function="Chemotaxis; Adaptation, Protection; Two- FT component regulatory systems" FT /product_synonym="probable chemotaxis protein sensory FT transduction histidine kinase" FT /protein_id="NP_248868" FT /note="GO_function: protein histidine kinase activity FT [goid GO:0004673] [evidence IEA]; FT " FT /db_xref="GI:15595376" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable two-component sensor" FT /translation="MPQDMSQFLQVFFEETEEHLATLELLLIGLDLDRPDSETLHGIFR FT AAHSIKGSSGMFGFDDITAVTHELETLLDRIRCGQMHLRPDMISSFLEARDVLQRLLDA FT HRSGRPDPGVPLLETVERLRGWLRVPEQEAAEEGFGLFDDAPARETADDDAFGFFDEGP FT GAPERAAAPEAFGLFDEAPGAPAASEAFGLFDEAPGSPPAEERAFGLFDGAPGSPAAPS FT APAQAVAAPARGAVAPVRGDGESGSIRVSVEKIDSLINLVGELVITQAMLGQLGEQLDP FT SRHERLQHALAQLEHNTRDLQESVMSIRMLPINFIFSRFPRLVRDTATRLGKQVELHLH FT GEHTELDKSVIEKLSDPLTHIVRNSIDHGIETPAERLAAGKPASGTVKLAASHQGGSVV FT VEVSDDGRGLSRPRILAKARERNLPVHDGMSDAEVWQLVFMPGFSTAETVTELSGRGVG FT MDVVKRNIGAMGGRIDIDSAPGMGTRIGIRLPLTLAILDGLIVAVEAVNYVIPLTYIVE FT SLQARSDDVRGLGGEDNAMIRVRGEYLPLFSLHELLRIGGEAPAPEQGIVVILESEGRS FT FALQVDELVGQQQVVIKSLEQNFRRVEGIAGATIMGDGSVALILDVDALPRLAAREDTA FT DERH*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene complement(204094..204459) FT /locus_tag="PA0179" FT CDS complement(204094..204459) FT /function="Chemotaxis; Adaptation, Protection; Two- FT component regulatory systems" FT /product_synonym="probable chemotaxis response regulator" FT /protein_id="NP_248869" FT /note="GO_process: phosphate metabolic process [goid FT GO:0006796] [evidence IEA]; FT " FT /db_xref="GI:15595377" FT /localization_and_confidence="Cytoplasmic, Class 2 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="probable two-component response regulator" FT /translation="MGKPILIVDDSASIRQMLSFTLKSAGYEVDEAADGKEGLGKAQSK FT SYSLVFTDQNMPNMDGLSLIRSLRNLAGYRSVPILMLTTESSDAMKQQGRSAGATGWLV FT KPFDPPKLLEVTRKVLP*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene complement(204657..205829) FT /locus_tag="PA0180" FT /gene_synonym="mcpA" FT /name="cttP" FT CDS complement(204657..205829) FT /function="Adaptation, Protection; Chemotaxis" FT /product_synonym="McpA" FT /protein_id="NP_248870" FT /note="GO_process: chromosome condensation [goid FT GO:0030261] [evidence IEA]; FT " FT /db_xref="GI:15595378" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="chemotactic transducer for trichloroethylene FT [positive chemotaxis], CttP" FT /translation="MRESLGVSLPSRPLLLKLGLLSLPWALCAGLHAVGLGVWLVLALG FT WFASLAMLVLLLRAPRQAVANANPQADAASPAWSAAQRALADETAQLDGHARQIDELLH FT SAIRQLSDSFHGLAERIDTQRGLSHSLIERYDGRGQVDEGINFQDFVRTTQQTLSLFVE FT ATLETSRTSQQLVERMDQVRLKITEILQSTQDMDAIAKQTNLLALNAAIEAARAGESGR FT GFAVVADEVRALSTRSTEFSAAIRKHVDVVHHEIQDAESAISQLADKDMSFALDSKHKI FT QGMLDDLEAMNRHTLKVIHELDRLSLEVGQGVDAAVTALQFQDMGSQLLGQMRKHHARL FT GAFALGLGALEARPRQEWPERVAREVEELRRPLPSPVSQNSVNVGEVELF*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT gene complement(206022..206954) FT /locus_tag="PA0181" FT CDS complement(206022..206954) FT /db_xref="GI:15595379" FT /function="Transcriptional regulators" FT /protein_id="NP_248871" FT /localization_and_confidence="Cytoplasmic, Class 2 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="probable transcriptional regulator" FT /translation="METLSNIQCFVRSAEAGSFAEAARRLGLTPAGVGKNVARLESNLG FT VRLFQRSTRRLTLTEAGERFLQEVGGSLEGIQTALANVSSVGNQPSGTLKVSMGLAFGR FT DYILPLLGEFLERYPDIVPDWHFDNRQVDLIGEGFDAAIGGGFELPPGVVARNLTPGHL FT ILLASPTYLRDKPPIRHPGDLGGFDGIRIRSPQTGRVRSWPLRRRNGEEAPIELRERMT FT MSDPEATCEVAAMGLGITLVCMQHAYAYLESGALVRVLPDWYVDAGNTSLYYAANKLLP FT AKTRVFVDFVVDYFRRQDLARRFSAFPTG*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene 207071..207823 FT /locus_tag="PA0182" FT /gene_synonym="yjgI" FT CDS 207071..207823 FT /db_xref="GI:15595380" FT /function="Putative enzymes" FT /protein_id="NP_248872" FT /localization_and_confidence="Cytoplasmic, Class 2 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="probable short-chain dehydrogenase" FT /translation="MSVSSASLAGKVAFVQGGSRGIGAAIVRRLAAEGASVAFTYVSSA FT DKSRALAAELEGAGASILALHADSADAAALVAAVDEAAARFGRIDILVNNAAVLALGSV FT EELPLADFERTLAINVRSVFVATQAAVKHMGDGGRVISIGSTNAERMPFAGGATYAMSK FT SALVGLTKGLARDLGPRGITVNNVQPGPVDTDMNPDDGDFAEALKGLMALPRYARSEEI FT ASFVAYLAGPEAAYITGASLTIDGGFSA*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_process: fatty acid biosynthetic process [goid FT GO:0006633] [evidence IEA]; FT " FT gene complement(207923..209533) FT /locus_tag="PA0183" FT /name="atsA" FT CDS complement(207923..209533) FT /db_xref="GI:15595381" FT /function="Central intermediary metabolism; Carbon FT compound catabolism" FT /protein_id="NP_248873" FT /localization_and_confidence="Cytoplasmic, Class 1 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="arylsulfatase" FT /translation="MSKRPNFLVIVADDLGFSDIGAFGGEIATPNLDALAIAGLRLTDF FT HTASTCSPTRSMLLTGTDHHIAGIGTMAEALTPELEGKPGYEGHLNERVVALPELLREA FT GYQTLMAGKWHLGLKPEQTPHARGFERSFSLLPGAANHYGFEPPYDESTPRILKGTPAL FT YVEDERYLDTLPEGFYSSDAFGDKLLQYLKERDQSRPFFAYLPFSAPHWPLQAPREIVE FT KYRGRYDAGPEALRQERLARLKELGLVEADVEAHPVLALTREWEALEDEERAKSARAME FT VYAAMVERMDWNIGRVVDYLRRQGELDNTFVLFMSDNGAEGALLEAFPKFGPDLLGFLD FT RHYDNSLENIGRANSYVWYGPRWAQAATAPSRLYKAFTTQGGIRVPALVRYPRLSRQGA FT ISHAFATVMDVTPTLLDLAGVRHPGKRWRGREIAEPRGRSWLGWLSGETEAAHDENTVT FT GWELFGMRAIRQGDWKAVYLPAPVGPATWQLYDLARDPGEIHDLADSQPGKLAELIEHW FT KRYVSETGVVEGASPFLVR*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT /note="GO_process: cellular catabolic process [goid FT GO:0044248] [evidence IDA]; FT GO_process: carbon utilization by utilization of organic FT compounds [goid GO:0015978] [evidence IDA]; FT GO_process: metabolic process [goid GO:0008152] [evidence FT IDA]; FT " FT gene complement(209621..210460) FT /locus_tag="PA0184" FT /gene_synonym="atsC" FT CDS complement(209621..210460) FT /db_xref="GI:15595382" FT /function="Transport of small molecules" FT /protein_id="NP_248874" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="probable ATP-binding component of ABC FT transporter" FT /translation="MNAFTAPATGTPLVSFRQVRKHFAVDGRRLEAIQQFDLEIGEGEF FT IAIVGASGCGKSTLLRLLIGLDRDYDGEIRVDGRPIAGIGGERGIVFQEHRLFPWLTVQ FT QNVALGLVNEALGETDKAARIDEYIRLVGLHGFERAYPHQLSGGMAQRVAIARGLVASP FT RLLLLDEPFSALDALTRQQLQEELLAIRRRTRITTLLVTHDVEEALYLADRVVVMEPRP FT GRIRRVVEVGLAHPRERGGFDFLRQREALLHELTADGEYVAPPPRRVENLPFEFIAC*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_component: ATP-binding cassette (ABC) FT transporter complex, substrate-binding subunit-containing FT [goid GO:0055052] [evidence IEA]; FT " FT gene complement(210457..212073) FT /locus_tag="PA0185" FT /gene_synonym="atsB" FT CDS complement(210457..212073) FT /db_xref="GI:15595383" FT /function="Membrane proteins; Transport of small FT molecules" FT /protein_id="NP_248875" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="probable permease of ABC transporter" FT /translation="MKNIDKTLSPAWSRPLPRLAPPPSAAFARRLGDGLLPWLLPLGLA FT LLWWVASHRHWMSAQVLPTPELVWQSARELLAGELWSELAISLRRLAWGLLAGVASGAA FT LGAWLGFSPRAERLVFPTFSALAQIPTLAWIPLFMLFFGIGELLKLVVLVKAVVVPVTI FT HTLVGVRDAQPKLREAAAVLRLPPRLLVWRLILPAALPAFLTGLRLALAQGWTSLLAVE FT LLASSEGIGYLMVQGRQLFMLDIVFVCILIIGLVGVGMDRAIQWLDRRLLHWPQAATGE FT FRRRPPGRGWQRLQVWLPPLALLLLWQSASSAEWVDPAILASPLEVARATWSGALDGSL FT PGALFDSLKRTLGGLLLGGGLGFLGGLLLGLWRPAERFFGPTFAALRQVAIFAWVPLLT FT AWFGLGEPAKLTFVAIAAFFPLLLATQRGIASLPPSLGEAARVLRLGPWRRLLRLVLPG FT AAPSVFAGLRLALIYAWLGTIGAEYFMPSDGGIGSLMIGAQQLFRMDLIGAGMLLVGLT FT GALLNALGQRIEARATRWRHA*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_component: ATP-binding cassette (ABC) FT transporter complex, substrate-binding subunit-containing FT [goid GO:0055052] [evidence IEA]; FT " FT gene 212340..213401 FT /locus_tag="PA0186" FT /gene_synonym="atsR" FT CDS 212340..213401 FT /db_xref="GI:15595384" FT /function="Transport of small molecules" FT /protein_id="NP_248876" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="probable binding protein component of ABC FT transporter" FT /translation="MKALTSSLLGLFAAPVLAGLLGAYVPLASAAPPKEIRIAVPDVSA FT GSSHSGGGVVDVLYTRQLLEKEFANDGIAVKWSFFKGAGPVVNEAFANGQVDFAYLGDL FT AAIIGKSGGLDSRLLAATARGVNHYLGVQPGSGIKTLEDLKGKRVGIFRGTASQLSFDN FT ALASVGLSEKDLKVINLDFSAALSALAARQIDATWGLAGLFALRDRGLAEIPLSTRDLN FT GAGTLQALLVGSGAFVDAHPDITERLLKVQLQAQDWLAREENRDAYIELVSKQASYPVV FT ILQSEYRGRKLGDALSPRLDADFLGRLDASIQAAKRFGLIRREFSAEQWAAPELLEAAG FT KLAKAKAVAQAAE*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_component: ATP-binding cassette (ABC) FT transporter complex [goid GO:0043190] [evidence IEA]; FT " FT gene 213819..214634 FT /locus_tag="PA0187" FT CDS 213819..214634 FT /db_xref="GI:15595385" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248877" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="MNLDSKLFDATLDLERVKVSVRTLVKLSRQEQSAIIRTLNEFGFL FT LLRSEHGEDRQELLALKELFGRAAPHPRADADGIVPISNARYVSGYLGSTPLEHKLHTD FT GAFLDTPEQLCSLQCVRNAREGGETLLASAGLAFERLRRRMPTKHLGLLRGDALTIVRK FT HQSSTQPVFRLNGEALGIKFRQNDGAAEVVEHPVAVEAFAELVAALEDPACQLRIKLEP FT GEILVLDNTAVLHGRTAFCANELREMRRLNFDGHGRLRAELELGFKVGL*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 214631..215512 FT /locus_tag="PA0188" FT CDS 214631..215512 FT /db_xref="GI:15595386" FT /function="Membrane proteins" FT /protein_id="NP_248878" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="hypothetical protein" FT /translation="VIAQFVAVVLPILICTGIGFAWSRSAGPVDTRALVFLVANVGFPC FT LLLSSLDRPGLSIGMVAGVFLATALAVLAFALLGLVALRLLRMPVRRYLPSIMLPNSGN FT MGIPIAYLAFGEEALVYAVAFSTLIQVGHATLGVWFASGDITPASILRNPMIYALAVAL FT GLIALGWSLPPPLRDVTRLLGGITVPLMLVMLGLSLAGLRLHETWRPLLLSLVRVWGGF FT AVGYGIAAGLGMAAVAAGTFAIQCGMPTAVLTYLLAKRYDGPVNEVAGMVLITTLLVLL FT STPLFIQLLPRA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(215550..216908) FT /locus_tag="PA0189" FT /gene_synonym="opdI" FT CDS complement(215550..216908) FT /db_xref="GI:15595387" FT /function="Membrane proteins; Transport of small FT molecules" FT /protein_id="NP_248879" FT /localization_and_confidence="Outer Membrane, Class 2 FT (primary); Outer Membrane, Class 3 (primary)" FT /product="probable porin" FT /translation="MQNLRRAVFAGLVAGTLSEGAAATAGDGGFVEDSELQFLARTYYF FT NRDYRDSPNNAGRNRFKPRSERNGYREEATQGLRLQFASGYTPGSLGFGLDAHAMLGLQ FT LDSGGGRTGTGNLPVGADGHPDHRYGKVGGALRLRHGETRLKYGQTTTSAPVFAASSNR FT TLAGMAYGLLLEDRSFDGLLLEGGRFTAASGPGESKVRGDISTVYGRLGAYPVRLDAVG FT FLGGQWQATERLQLSLYASRFDDIWQQAYFGASHRQPLGGERALRVDLDAYRTRDSGQS FT RFGRIDTLTSSLALGYEHGPQRITLAYQRVHGEQPFDYMAFGDGRSSASMVLANSVGYS FT DFNGPGERSWQLRYDLDLGALGLPGLSLHALHARGRAGASASSAAESIYAGLYGRDGRH FT RENDLGFAYRVKAGPLAGLALRASQAWHRGNASYLDGDIDETRLVVDYSRSIW*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene 217156..217881 FT /locus_tag="PA0190" FT CDS 217156..217881 FT /db_xref="GI:15595388" FT /function="Putative enzymes" FT /protein_id="NP_248880" FT /localization_and_confidence="Periplasmic, Class 3 FT (primary)" FT /product="probable acid phosphatase" FT /translation="MNNKTLCPSLLLCLSLLAPLSCLGETAAAPYPLAHPPRLADYLPP FT PPAADSAAAVADLGAVLEAQRLRTPEQVRRVRAHDQWEDNVFPFAGDLLGASFDKERLP FT LTRSFFNRAQENLVEVLMPAKKHFARPRPYEVTPKVKPVLPPPEGESYPSGHTMDSYFK FT ASLLSMLVPEHHDAFFARAEEHAQSRVLAGVHFPSDLEGGQTAAAALVASLLADPAVAA FT DFAAVREELRGALGLPKLQ*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene complement(217905..218822) FT /locus_tag="PA0191" FT CDS complement(217905..218822) FT /db_xref="GI:15595389" FT /function="Transcriptional regulators" FT /protein_id="NP_248881" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable transcriptional regulator" FT /translation="MDLRQLRYFIALAEHRSFVRAADAMGITQPAFSRSIQGLEQELGC FT QLVDRGSKDLRPTPEGQVVLQHALSLVQGSANLIHEIAQLNKLDAGELRFGSGPAPAQQ FT LVPDAVADFINRHPRVQISLDVDNWEKLSRALLREEIEFFVADIRDFEADPNFQTRPLT FT PRRGQFFCRPQHPLLGKDSLSTNDLFNYPLASTLIPPGIRKLLANLSGKIDFAANIRCE FT NMHALIRIVRQTDAIGIASDETLRPYLQRGELQPLQWRNLPQNLDSLSARCGIISRSGY FT RLSAAAKAMIETLVELDQAQHAAA*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_process: positive regulation of transcription, FT DNA-dependent [goid GO:0045893] [evidence IEA]; FT " FT gene 219172..221544 FT /locus_tag="PA0192" FT CDS 219172..221544 FT /db_xref="GI:15595390" FT /function="Membrane proteins; Transport of small FT molecules" FT /protein_id="NP_248882" FT /localization_and_confidence="Outer Membrane, Class 2 FT (primary); Outer Membrane, Class 3 (primary)" FT /product="probable TonB-dependent receptor" FT /translation="MKHHYRLPLRRTPPGGSDYALALLLALGGALPASAADAPAPAEEA FT PPLAGSAPAKADTALGKVTVTARRREEDSQKVPTPITVLGGETLEAQRISRVQDLQQVL FT PSVNVAYIHARQSSVAVRGIGNNPASDGLEGSAGIYLDNVYLGRPGMAVFDLLDIEQLE FT LLRGPQGTLFGKNTTAGVLNISTRAPTFTAERTVEVSGGQDGYFQGRGTVSGPLGETLA FT GRLSAYRTRDDGYIKNIHDDNYLNGGERQGARGQLLFEPNEDFSLRWIADYNEEDSSNG FT SMVVYGGAERFWQRAALVGASPLRDPQRRKVNINGRQHVSVHQGGSSLEANWNLAGGYR FT LTSISAYRYWHFTPANDEQLNVSAINDTGVEVHDRQFSQEIRLASPTGGAFDYVVGAYA FT FRQNLGNKTFTSYGPLADLYLLGANLGALNDTYSKANGKIETDSFALFAQGTWHLTERL FT DFTAGLRGTYEEKNAKVERFAPLGGAAVGGVGAAVRNGQLGAYDSGDLSQYNFAPSALL FT SLSYQFSDDLLGYASLSHGEKSGGVNLAVGSAPSAGADSLLVGPERANDAELGLKSTLF FT DRRLLLNANLFWTGIHGYQATTLYQAPGSTQLVQVLANAGSVRSRGLEFEATALPLRGL FT TLNFNGSYNDVTYLSFKDAPCPAEVSTRPGAPSSCDLTGQRVVGASKWIANLNGEYQWR FT LDDRFQPYVSASYAYRSAAEGTLDNSDLSKIDGYALVNLAAGLRSDLGDGQLDTSVWLK FT NAFDKDYYLSAFASINGSYTASVGQPRTLGVSLRYDF*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_component: outer membrane [goid GO:0019867] FT [evidence IEA]; FT " FT gene 221585..222487 FT /locus_tag="PA0193" FT CDS 221585..222487 FT /db_xref="GI:15595391" FT /function="Putative enzymes" FT /protein_id="NP_248883" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="MSNAAQALATPVRLDIRPVAGRIGAEIRGVTLSGELDAATVEAIQ FT AALVRHKVIFFRDQSHLDDQTQEAFAHLLGEPVAHPTVPSREGTRFLLELDGAEGRRAN FT SWHTDVTFVEAYPKASILRSVVAPESGGDTVWANTASAYADLPAELRELADRLWAVHSN FT EYDYAGVKPSASVEQLENYRKVFTSTVYETEHPVVRVHPQSGERTLLLGHFVKRLKGLS FT QHDSAHLFAVLQGHVTRLENTVRWRWQAGDVAIWDNRATQHYAIDDYGDQPRVVRRVTL FT GGDVPVGIDGQRSRTIRKA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 222555..223454 FT /locus_tag="PA0194" FT CDS 222555..223454 FT /db_xref="GI:15595392" FT /function="Putative enzymes" FT /protein_id="NP_248884" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="MSQSATARQPEPEVAEAFRITPLEAPLGAEVRGLDARRPLAPEQV FT LALKQALREHHILVFRQQHLDDEQYLRFATLFGSVFQPPADIPVLSSGGDGKVPDIVKV FT ANTGDGELGNFALPAHIDHQWTPVPSSGSFLYALEVPSSGGETRFTNLARAYESLDEAT FT RREIDGLRLINYNPFIRLREGGYGGGFATYRTPDIEPIQGSEHPLVRTHPESGRRVLFL FT SAHTEVEIPGYDPARGQALIGRLREHLARPELSYSHAWSVGDIVWWDNQAVLHARNAFP FT ASERRRLKRISLAGSRPF*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 224101..225217 FT /locus_tag="PA0195" FT /name="pntAA" FT CDS 224101..225217 FT /db_xref="GI:15600764" FT /function="Energy metabolism; Transport of small FT molecules" FT /protein_id="NP_248885" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 2 (primary); Cytoplasmic Membrane, Class 3 (primary)" FT /product="putative NAD(P) transhydrogenase, subunit alpha FT part 1" FT /translation="VQIGVPLETHAGETRVSATPETVKKLIGQGHQVIVQSGAGVSASQ FT PDSAYEAAGATIGSAAEAFGADLVLKVVAPSAAELAQMKSGAVLVGMLNPFDNENIARM FT AERGITAFALEAAPRTSRAQSLDVLSSQANIAGYKAVMLAANHYPRFMPMLMTAAGTVK FT AARVLILGAGVAGLQAIATAKRLGAVIEASDVRPAVKEQIESLGAKFVDVPYETDEERE FT CAEGVGGYARPMPASWMERQAKAVHERAKQSDIVITTALIPGRKAPTLLHEATVAEMKP FT GSVVIDLAAAQGGNCPLTEADQVVVRHGVTIVGHSNLAALVPADASALYARNILDFLKL FT TLNAEGFSVNLEDDIVAACLMCRDGQAVRKNG" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: generation of precursor metabolites and FT energy [goid GO:0006091] [evidence ISS]; FT GO_process: transport [goid GO:0006810] [evidence ISS]; FT GO_process: oxidation reduction [goid GO:0055114] FT [evidence IEA]; FT " FT gene 225295..225603 FT /locus_tag="PA0195.1" FT /name="pntAB" FT CDS 225295..225603 FT /db_xref="GI:119167455" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248886" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="putative NAD(P) transhydrogenase, subunit alpha FT part 2" FT /translation="MDIISDGIYNLIIFVLAVYVGYHVVWNVTPALHTPLMAVTNAISA FT IVIVGAMLAAALTVTPLGKAMGTLAVALAAVNVFGGFLVTRRMLEMFKKKAPKAGGH*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: oxidation reduction [goid GO:0055114] FT [evidence IEA]; FT " FT gene 225603..227039 FT /locus_tag="PA0196" FT /name="pntB" FT CDS 225603..227039 FT /db_xref="GI:15595393" FT /function="Transport of small molecules; Energy FT metabolism" FT /protein_id="NP_248887" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 2 (primary); Cytoplasmic Membrane, Class 3 (primary)" FT /product="pyridine nucleotide transhydrogenase, beta FT subunit" FT /translation="MSMNLVTLLYLIASVCFIQALKGLSHPTTSRRGNLFGMVGMAIAV FT ATTVGLVFKLGAEIATTGVGYIVVGLLVGGTAGSIMAKRVEMTKMPELVAFMHSMIGLA FT AVFIAIAAVVEPQSLGIVAHLGDTIPTGNRLELFLGAAIGAITFSGSVIAFGKLSGKYK FT FRLFQGTPVQFSGQHLLNLVLGLATLGLGLVFMFTGNLTAFAVMLALAFVLGVLIIIPI FT GGADMPVVVSMLNSYSGWAAAGIGFSLNNSMLIIAGSLVGSSGAILSYIMCKAMNRSFF FT NVILGGFGAEADAGGPAGSKEQRPVKSGSADDASFLLTNADSVIIVPGYGLAVARAQHA FT LMELAEKLTHRGVTVKFAIHPVAGRMPGHMNVLLAEAEVPYEQVFEMEDINSEFGQTDV FT VLVLGANDVVNPAAKNDPKSPIAGMPILEAYKAKTVIVNKRSMASGYAGLDNELFYLDK FT TMMVFGDAKKVIEDMVKAVE*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: generation of precursor metabolites and FT energy [goid GO:0006091] [evidence ISS]; FT GO_process: transport [goid GO:0006810] [evidence ISS]; FT GO_function: NAD(P)+ transhydrogenase (AB-specific) FT activity [goid GO:0008750] [evidence RCA]; FT " FT gene 227382..228194 FT /locus_tag="PA0197" FT /name="tonB2" FT CDS 227382..228194 FT /db_xref="GI:15595394" FT /function="Transport of small molecules" FT /protein_id="NP_248888" FT /localization_and_confidence="Periplasmic, Class 3 FT (primary)" FT /product="TonB2" FT /translation="MATPQPVDARTQPWRETPGGDLVALGRPVRQALHLVRHNPAQGRV FT LSRRETILLVLFALTLHGAVIHWLSQQRTPALPEVPPQVPPMTIEFTAPAPPVVEPPPP FT EPLPPVVEEPPPPVVDENAVKPPPPKPVPKPKPKPKPQPRPKPAPKAVEPAPPAPPQPA FT APPAPPAPAAAPAPLTPPSANAGYLHNPAPEYPALAMRRGWEGTVLLRVHVLASGSPSE FT IQVQKSSGREALDQAAVKAVKRWSFVPAKRGDKAEDGWVSVPIDFKLN*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT /note="GO_function: energizer of outer membrane receptor- FT mediated transport activity [goid GO:0015570] [evidence FT IEA]; FT " FT gene 228223..228942 FT /locus_tag="PA0198" FT /name="exbB1" FT CDS 228223..228942 FT /db_xref="GI:15595395" FT /function="Transport of small molecules" FT /protein_id="NP_248889" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="transport protein ExbB" FT /translation="MSLLTTPLESVEGAVIWLLVGFSVVTWGLALVKGVQFARQKRQDR FT QFQKQFWSATSLDSAGEQAQDKQGAGARVAQAGFAAIQVQDNGQPDLAQSINHQDRLER FT ALRQQIQRERRSLESGLAVLASIGSTSPFIGLFGTVWGIMEALKGISAAGSASLETVAG FT PIGSALIATGVGIAVAVPAVLVYNYFLRRLKLTAADLDDFAHDFYSLAQKSAFRVIVHP FT SAARQAGNPSRNVKEAS*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: transport [goid GO:0006810] [evidence FT ISS]; FT GO_process: proton transport [goid GO:0015992] [evidence FT IEA]; FT " FT gene 228944..229345 FT /locus_tag="PA0199" FT /name="exbD1" FT CDS 228944..229345 FT /db_xref="GI:15595396" FT /function="Transport of small molecules" FT /protein_id="NP_248890" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="transport protein ExbD" FT /translation="MAFSTQDSDEVLSEINVTPLVDVMLVLLVVFIVTAPLLTNSIPIN FT LPKTESVAPPEQKDPLVVSIDGAGKLFVNKDEIQPELLESNLAAAKAKDAEVRVQLQAD FT EGVNYGQVAKAMASIERAGITRLAVITAR*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: transport [goid GO:0006810] [evidence FT ISS]; FT GO_component: intrinsic to external side of plasma FT membrane, in periplasmic space [goid GO:0031237] [evidence FT IEA]; FT " FT gene complement(229526..229738) FT /locus_tag="PA0200" FT CDS complement(229526..229738) FT /db_xref="GI:15595397" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248891" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MAKKFPLHPSHPERICWGCDRYCSAESMGCGNGASRTQHPSELFG FT EDWAGEWEVEGTEDAKEQEAPARQA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 229954..230535 FT /locus_tag="PA0201" FT CDS 229954..230535 FT /db_xref="GI:15595398" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248892" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MHSERVRYVLVPGWYGSEDAHWQSHWQRALPNASRVEQQDWITPL FT RADWIAELDAEIRRQPGPVVLIAHSLGCVTVALWAAQAERRVRDQVRGALLVAPADVER FT ESCAEALRNFAPISREPLPFPSVLVGSDNDQACSPQRAMHLARAWGAETVILPEAGHIN FT VKSGHGAWEAGYRHLFRLQYLIDSQARRRA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(230543..232000) FT /locus_tag="PA0202" FT CDS complement(230543..232000) FT /db_xref="GI:15595399" FT /function="Putative enzymes" FT /protein_id="NP_248893" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable amidase" FT /translation="MKPNPPINELVLLQAHQLAERIRLRQVSCREVMQAYLAHIERFNP FT RVNALVSLLPAERLLEEADARDGELARGEWRGWMHGLPHAIKDLSLTRGIRTTLGSPLY FT RDYIPERDGIMVERIRAAGAILIGKTNTPEFGLGSQTYNPLFGATACAYDERLSAGGSS FT GGAAAALALHLVPVADGSDMMGSLRNPAAFNNVIGFRPSQGRVPFDDSADLFFDQLGYE FT GPMGRSVRDTALLLSVQAGADRRAPLSIAEPGARFAAPLERDFEGTRLGWLGDLDGYLP FT MQDGILQMCQRALGDFRSLGCEIEEANLGFAPERLWECWRTLRHWLVAGSLGGVHADPA FT KRALLKPEALWEVENGLRLGADAVFRASVIRSDWYRAIGRLFERYDYLLLPSAQVFPFA FT KETPWPRSIEGVAMDTYHRWMEVVVPGSLSGCPVANVQAGFNAEGLPMGLQIIGPHQAD FT FAVLQLAHAYERASRWFERQPSPLLAN*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_function: glutaminyl-tRNA synthase (glutamine- FT hydrolyzing) activity [goid GO:0050567] [evidence IEA]; FT " FT gene complement(232066..233100) FT /locus_tag="PA0203" FT CDS complement(232066..233100) FT /db_xref="GI:15595400" FT /function="Transport of small molecules" FT /protein_id="NP_248894" FT /localization_and_confidence="Periplasmic, Class 2 FT (primary); Periplasmic, Class 3 (primary)" FT /product="probable binding protein component of ABC FT transporter" FT /translation="MHQRIASIGLGLTLALGGSAQAAGQLNVVSWSGYFSPQLLEKFEK FT ESGIRVTVDSYDSNETLLAKLKQGGAGYDVAIPSQQFVPILVKEALLERFDPAAEPYYA FT NLLDNLKKPAWDPEGAYSVPFIWGTTSVVLDGARYAGPADSYAVLYQPPEELRGRINMF FT DSVSEVVDMASLYLGIPLCSADPKQMQRVLELLKAQKPFVKTYSSKAGSIRENLAAGEV FT DMSMFWGGSSMRARELKPSLKYLYPKEGVLAWVDNLVIPRGSRNPDNARRFIAFLAQPE FT NAALTQNFLKHQSPVKGVEPYLDASLKDAPELHVPAGTRVVFSQTCGEDAIRLADRLWT FT NLMR*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene complement(233123..233932) FT /locus_tag="PA0204" FT CDS complement(233123..233932) FT /db_xref="GI:15595401" FT /function="Membrane proteins; Transport of small FT molecules" FT /protein_id="NP_248895" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="probable permease of ABC transporter" FT /translation="MIARLWKGSRHNVQDFPGFGAFSLLFYLYLYAPILVLVVYSFNAN FT QSATVWTGFSLDWYRAAFANQALRQAAGNSLLIAVCASAAATAIATLAALGTSRGAKFR FT GLRLSMGAIMLPLVLPEIVVGVATLALFSTVGLSLGYGNLIIAHTVFCIPFAYLPIRAR FT LDDMDLSLEQAAADLYAGPWRTLRKVTLPLLAPGIFSGLMLAFIVSLDNFVISMMVSQA FT GTTTLPIFIFGLLRMGVTPDVNAVSTLILGVSVIFVSLSYLLGKPRA*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_component: ATP-binding cassette (ABC) FT transporter complex, substrate-binding subunit-containing FT [goid GO:0055052] [evidence IEA]; FT " FT gene complement(233929..234849) FT /locus_tag="PA0205" FT CDS complement(233929..234849) FT /db_xref="GI:15595402" FT /function="Membrane proteins; Transport of small FT molecules" FT /protein_id="NP_248896" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="probable permease of ABC transporter" FT /translation="MHPIPSPGAALQRRQALRSFLGVTPALVAIGLFLVLPILIVAAYS FT LMEANPYGGVDRAFSGEAYVSLLFERQMDDSLAFADSYLTIALRSLGIAALTTLITLSL FT GFPVAVWLAMQPPRRRGLLIFLITVPFWANLLIRTYAWILLLRGSGVINNGLLGLGLVD FT HPLPLLYSDGAVLLGLVYTYAPFVVLPIYATLEKMDMRLLEAAQDLYAGRLRTLRKVVL FT PTARPGILAGAILTFVPCLGAMIAPELLGGGTRMMLGNLIFRQFADARNWPFGAALSLV FT LMAAVMLILTVYAWRAERLARGMGR*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_component: ATP-binding cassette (ABC) FT transporter complex, substrate-binding subunit-containing FT [goid GO:0055052] [evidence IEA]; FT " FT gene complement(234875..235987) FT /locus_tag="PA0206" FT CDS complement(234875..235987) FT /db_xref="GI:15595403" FT /function="Transport of small molecules" FT /protein_id="NP_248897" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="probable ATP-binding component of ABC FT transporter" FT /translation="MSALHSLRTHAVSIRAVRKVYGDPESGPVALKRVDLDIRDNEFFT FT LLGPSGCGKTTLLRMIAGFEFPTEGEILLYGENIAARPPFERPVNTVFQHYALFPHMSI FT AENLAFGLESRPLGRSLGKAEIAERVREMLALVQMERFADRRPGQLSGGQQQRVALARA FT LAPQPRVLLLDEPLSALDLKLRQAMREELKAIQAKTGITFIFVTHDQEEALTMSDRIAV FT LSEGQVQQVGPPEEIYERPGNRFVADFIGETNFIEAELLQRDGPLALYRGPGGEAFEAA FT ARDGLAAGARVCLSIRPERLDLLAANTGGGLPCTVESQVYLGTDLQYRVRLADGSLLTV FT RTPNGTARRFATGEAACLAVAKDSASVLLD*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_component: ATP-binding cassette (ABC) FT transporter complex, substrate-binding subunit-containing FT [goid GO:0055052] [evidence IEA]; FT " FT gene 236218..237111 FT /locus_tag="PA0207" FT CDS 236218..237111 FT /db_xref="GI:15595404" FT /function="Transcriptional regulators" FT /protein_id="NP_248898" FT /localization_and_confidence="Cytoplasmic, Class 2 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="probable transcriptional regulator" FT /translation="MSIPRLPPLNAVRAFEAAARLGSYVAAAKALHVTQPAVGRHVRLL FT EDWLGARLFERTSRGVLLTPAGRQYYAAVSTALQQIAEAGGQLSGARWLRIMAVPAFSR FT RWLTSRLETLCAQRPGLKIALEPNPTFDHVEERSADLGIVYGLPGQYANPRALLIRPKV FT FPVCSPAYLAAAGPLESAEQLVAHKLIHVDDGEWWNLWFSAIGVDVEVRPAVLYLSNDH FT ALARAEEGLGIALANEVLVRQELRSGALVRPLAAEAALECYQVLTPPGTPSADVEWFIG FT WLGEALREEFPDAVTS*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene 237232..238896 FT /locus_tag="PA0208" FT /name="mdcA" FT CDS 237232..238896 FT /db_xref="GI:15595405" FT /function="Carbon compound catabolism" FT /protein_id="NP_248899" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="malonate decarboxylase alpha subunit" FT /translation="MTTPISPPPQWSRRRQEKQRRLERVRGLADGAVLPREGLVAALEA FT LIAPGDRVVLEGNNQKQADFLSRSLARVDPGKLHDLHMIMPSVGRPEHLDLFELGIARK FT LDFSFSGPQSLRIGQLLEDGLLEIGAIHTYIELYARLVVDLIPNVALVAGFVADREGNV FT YTGPSTEDTPALVEPTAFSDGIVIVQVNRIVDDPRDLPRVDIPASWVDFVVEADQPFYI FT EPLFTRDPRHIKPVHVLMAMMAIRGIYQRHNVQSLNHGIGFNTAAIELILPTYGESLGL FT KGKICRHWTLNPHPTLIPAIESGWVESVHCFGTELGMEGYIAQRPDVFFTGRDGSLRSN FT RMFCQLAGQYAVDLFIGATLQVDGDGHSSTVTRGRLAGFGGAPNMGHDPRGRRHSTPAW FT LDMRGEPEALLERGRKLVVQMVETFQDGGKPTFVERLDALEVARQTGMPLAPVMIYGDD FT VTHVLTEEGIAYLYKARSLEERQAMIAAVAGISPIGLRHDPRETQRMRREGLIALPEDL FT GIRRTDASRELLAAKSIAELVEWSGGLYQPPARFRSW*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: cellular catabolic process [goid FT GO:0044248] [evidence ISS]; FT GO_process: carbon utilization by utilization of organic FT compounds [goid GO:0015978] [evidence ISS]; FT GO_function: decarboxylation-driven active transmembrane FT transporter activity [goid GO:0015451] [evidence IEA]; FT " FT gene 238896..239777 FT /locus_tag="PA0209" FT /gene_synonym="mdcB" FT CDS 238896..239777 FT /db_xref="GI:15595406" FT /function="Putative enzymes" FT /protein_id="NP_248900" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="conserved hypothetical protein" FT /translation="MNAIANLAATPGADLGECLADLAVDALIDEAELSPKPALVDRRGN FT GAHADLHLGLMQASALSLWPCFKEMADAAQRHGRIDARLRGVLGQLGRDGEAAMLRTTE FT GVNTHRGAIWALGLLVAAAALEPRRTQAGEVAARAGRIALLDDPAAAIGDSHGERVRRR FT YGVGGAREEARLCFPRAVRHGLPQLWRSREGGAGEQNARLDALLAIMSVLDDTCVLHRA FT GRVGLAAMQDGARAVLAAGGSASLAGRRRLCELDRRLLALNASPGGAADLLAACLFLDR FT LPAVSGGWAGSL*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_function: triphosphoribosyl-dephospho-CoA FT synthase activity [goid GO:0046917] [evidence IEA]; FT " FT gene 239779..240078 FT /locus_tag="PA0210" FT /name="mdcC" FT CDS 239779..240078 FT /db_xref="GI:15595407" FT /function="Carbon compound catabolism" FT /protein_id="NP_248901" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="malonate decarboxylase delta subunit" FT /translation="METLTFEFPAGAPARGRALAGCVGSGDLEVLLEPAAGGALSIQVV FT TSVNGSGPRWQQLFARVFAASTAPAASIRIHDFGATPGVVRLRLEQALEEAGHD*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: cellular catabolic process [goid FT GO:0044248] [evidence ISS]; FT GO_process: carbon utilization by utilization of organic FT compounds [goid GO:0015978] [evidence ISS]; FT GO_function: acyl carrier activity [goid GO:0000036] FT [evidence RCA]; FT GO_function: carboxy-lyase activity [goid GO:0016831] FT [evidence RCA]; FT " FT gene 240071..240934 FT /locus_tag="PA0211" FT /name="mdcD" FT CDS 240071..240934 FT /db_xref="GI:15595408" FT /function="Carbon compound catabolism" FT /protein_id="NP_248902" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="malonate decarboxylase beta subunit" FT /translation="MTDVARLLALRSFTELGARQRARALLDAGSFRELLDPFAGVQSPW FT LERQGIVPQADDGVVVARGLLDGQPAVLAAIEGAFQGGSLGEVSGAKIAGALELAAEDN FT RNGVPTRALLLLETGGVRLQEANLGLAAIAEIQAAIVDLQRYQPVVAVIAGPVGCFGGM FT SIAAGLCSYVLVTREARLGLNGPQVIEQEAGIAEYDSRDRPFIWSLTGGEQRFASGLAD FT AYLADDLDEVRTSVLAYFAKGLPARPRCRRAEDYLRRLGDLDTAEQPDAAGVRRLYQGL FT GQGDAT*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: cellular catabolic process [goid FT GO:0044248] [evidence ISS]; FT GO_process: carbon utilization by utilization of organic FT compounds [goid GO:0015978] [evidence ISS]; FT GO_function: carboxy-lyase activity [goid GO:0016831] FT [evidence RCA]; FT " FT gene 240931..241737 FT /locus_tag="PA0212" FT /name="mdcE" FT CDS 240931..241737 FT /db_xref="GI:15595409" FT /function="Carbon compound catabolism" FT /protein_id="NP_248903" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="malonate decarboxylase gamma subunit" FT /translation="MSQPFASRGLAWFQALAGSLAPRPGDPASLRVADAELDGYPVRFL FT AVVPDPDNPFPRARQGEVGLLEGWGLAAAVDEALEADREAPRKRALLAIVDVPSQAYGR FT REEALGIHQALAGAVDAYARARLAGHPLIGLLVGKAMSGAFLAHGYQANRLIALHDPGV FT MVHAMGKAAAARITLRSVEELEALAAKVPPMAYDIDSYASLGLLWRTLPVETVEVPSTA FT DLVRVRTCLGEALADILGGPRDLGGRLGAANREASARVRRLLREQW*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: cellular catabolic process [goid FT GO:0044248] [evidence ISS]; FT GO_process: carbon utilization by utilization of organic FT compounds [goid GO:0015978] [evidence ISS]; FT GO_function: carboxy-lyase activity [goid GO:0016831] FT [evidence RCA]; FT " FT gene 241753..242445 FT /locus_tag="PA0213" FT /gene_synonym="mdcG" FT CDS 241753..242445 FT /db_xref="GI:15595410" FT /function="Carbon compound catabolism" FT /protein_id="NP_248904" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="VVIANSSQRGSSRRRLAPDPMRRRAGPEPHDLLLGMAPAHLPENA FT PAWVCAALKAGWPVVVRRAPADPARVAIGVRGLAREQRWAGWMPLAAITRRLRPEALGQ FT REPAMLRDLPAWRALRDLRAPLNALGLAWGVTGGAGFELASGVAVLHPDSDLDLLLRTP FT RPFPRDDALRLLQCFEQCPCRIDLQLQTPAGGVALREWAEGRPRVLAKGSEAPLLLEDP FT WRIAEVEA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_process: prosthetic group biosynthetic process FT [goid GO:0051191] [evidence IEA]; FT " FT gene 242442..243374 FT /locus_tag="PA0214" FT /gene_synonym="mdcH" FT CDS 242442..243374 FT /db_xref="GI:15595411" FT /function="Carbon compound catabolism" FT /protein_id="NP_248905" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable acyl transferase" FT /translation="MSVLFAYPGQGAQRPGMLAALPDEPPVRACLEQAADCLGQAPAEL FT ESAEALRGTRAVQLCLLIAGVAASRLLETRGHRPGLVAGLSIGAYPAAVVAGALDFDDA FT LRLVALRGELMQAAWPEGYGMSAILGLEQAQLEALILAVRREHPPLYLANVNAERQLVV FT AGSEAALAALAERARAAGASAAKRLAVSVPSHCALLDEPAARLAEAFAGIRLHRPRVPY FT LSSSRARLVAEPAALADDLAGNMARRVEWLATLRSAYERGARLHLELPPGRVLSGLARP FT LFGCATPAFEGSRADTLDALLREEEKRTR*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene 243431..243835 FT /locus_tag="PA0215" FT /gene_synonym="madL" FT CDS 243431..243835 FT /db_xref="GI:15595412" FT /function="Membrane proteins; Transport of small FT molecules" FT /protein_id="NP_248906" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="malonate transporter MadL" FT /translation="MIIYGVALLSLCTLAGLFIGEILGVLLGVPANVGGVGIAMLLLIF FT VGSYLGKRGLLSAKTEQGVEFWSAVYIPIVVAMAAQQNVLGALSGGPAAILAGIAAVAV FT AFALVPLLDRFGRKKAEGARPLKPRTSVQG*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: organic acid transport [goid FT GO:0015849] [evidence IEA]; FT " FT gene 243841..244605 FT /locus_tag="PA0216" FT /gene_synonym="madM" FT CDS 243841..244605 FT /db_xref="GI:15595413" FT /function="Membrane proteins; Transport of small FT molecules" FT /protein_id="NP_248907" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="malonate transporter MadM" FT /translation="MFESLNKVINGYGLISGFAIIGVTMAVSYWLSARLTRGRLHGSAI FT AIFLGLVLSYVGGVATGGQKGLVDVPLMSGIGLLGGAMLRDFAIVATAFGVNVEELRRA FT GVSGVVSLFLGVGSSFVAGVAVAMAFGYTDAVSLTTIGAGAVTYIVGPVTGAALGASSE FT VMALSIAAGLVKAILVMVLTPFVAPYIGLNNPRTAVIFGGLMGTSSGVAGGLAATDPKL FT VPYGCLTAAFYTAIGCLLGPSLLYFSVRGLVG*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: organic acid transport [goid FT GO:0015849] [evidence IEA]; FT " FT gene complement(244690..245619) FT /locus_tag="PA0217" FT /gene_synonym="mdcR" FT CDS complement(244690..245619) FT /db_xref="GI:15595414" FT /function="Transcriptional regulators" FT /protein_id="NP_248908" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable transcriptional regulator" FT /translation="MLIDEEITLKKLETFLAFMRTGNLARAAAELGTSNVSVHRAIHSL FT ESALRCPLFKHEGRNLTPLESAYVLEERAQKLVQEVLDTVRLTREAAGFSAERFKLGAL FT YSLTVKTVPQLIMGLKLRRSALNIDLILGSNVDLFYQLKNMELDAILVSLNDSVSDPDC FT EHLPLFSDDIFLAVPVDSPYARLAEIDLSTLRDTPFVTLTQGFATHQDGTRVFQQAGFE FT PQIAMQVNDIFTLLSMVSSGVGHALLPKRIEAVYENRVRLIPLQPRYRLQQHIGVVFLK FT AKERDPNLLALLAECRMYSLRLEQEAAG*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene complement(245948..246868) FT /locus_tag="PA0218" FT CDS complement(245948..246868) FT /db_xref="GI:15595415" FT /function="Transcriptional regulators" FT /protein_id="NP_248909" FT /localization_and_confidence="Cytoplasmic, Class 2 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="probable transcriptional regulator" FT /translation="VASYTLRQLKYFVTTVECGSVAEASRKLYIAQPSISTAVKGLEES FT FGVQLFIRHHAQGVSLTPAGARFYRKAQELLRMAHEFEQNALADNDVIAGQIDIGCFET FT VAPLYLPGLIAGFRQAYPGVEIRIRDGEQQELVQGLTSGRFDLAFLYEHDLDSTIETEP FT LMPPQRPHALLPEGHRFAGQAQVSLRDLCLEPMILLDVQPSRTYFVSLFEELGLTPNIA FT FSSPSIEMVRGMVGQGFGFSLLVTRPHSECTYDGKKVVMVDLAEPVSTSGLAAAWLKRA FT QLTKPARLFVDYCREQLGKLAERRH*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene 247219..248709 FT /locus_tag="PA0219" FT CDS 247219..248709 FT /db_xref="GI:15595416" FT /function="Putative enzymes" FT /protein_id="NP_248910" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable aldehyde dehydrogenase" FT /translation="VFELSDWQRRAATQRFIDQALIGGRQRPAASGATFDAIDPASNRL FT LARVAACDAADVDAAVAAARRAFDEGPWARLAPVERKRVLLRLAELMLAHREELALLDS FT LNMGKPVMDAWNIDVPGAAHVFAWYAESLDKLYDQVAPTAQQTLATITRVPLGVIGAVV FT PWNFPLDMAAWKLAPALAAGNSVVLKPAEQSPFSALRLAELALEAGVPEGVLNVVPGLG FT EQAGKALGLHPEVDALVFTGSTEVGKYFMQYSAQSNLKQVWLECGGKSPNLVFADCRDL FT DLAAEKAAFGIFFNQGEVCSANSRLLVERSIHDEFVERLLAKARDWQPGDPLDPASRAG FT AIVDRRQTAGILAAIERAQGEGATLLGGGRQLTINGSDNFIEPTLFGDVRPDMQLAREE FT IFGPVLAISAFDSEDEAIRLANDSRYGLAASLWSDDLHRAHRVARRLNAGTVSVNTVDA FT LDVAVPFGGGKQSGFGRDLSLHSFDKYTQLKTTWFQLR*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_function: betaine-aldehyde dehydrogenase FT activity [goid GO:0008802] [evidence IEA]; FT " FT gene 248767..250200 FT /locus_tag="PA0220" FT CDS 248767..250200 FT /db_xref="GI:15595417" FT /function="Transport of small molecules" FT /protein_id="NP_248911" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="amino acid APC family transporter" FT /translation="MNDTPNVREPALRRVLGLGPLLAVAIGLVVSQGVMVLMLQGAGTA FT GLGFIVPLGVAYLLALSYAFSFSELALMIPRAGSLSSYTEVAIGHFPAILATFSGYVVV FT AMFALSAELLLLDLIIGKVYPGALPPMLVAYGVLGLFTLLNLLGIDIFARLQSALALLM FT MIVLLVLGLGAVSSDHASAQTALASGWNPLGVSALALTAMAVWGFVGAEFVCPLVEETR FT RPERNIPRSMILGLSIIFLTIALYCFGALLCIPQAELAGDPLPHFLFANRVFGEYGQLF FT LVIAAITATCSTLNSSLAAIPRMLYGMAQNGQAFPQFKQLSRRARTPWVAVLFVAAITG FT LPILILGQDPDSINLLLLAAALAWLLAYIIAHVDVLALRRRYPHIARPFRTPFYPLPQL FT FGIAGMIYAVVHVSPTPEMTGRIFASAGVVLGVVSLVAVVWIKGVMRKPLFVPEPLETA FT GETAQGKSVALDPLQSPSA*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT gene 250231..251613 FT /locus_tag="PA0221" FT CDS 250231..251613 FT /db_xref="GI:15595418" FT /function="Putative enzymes" FT /protein_id="NP_248912" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable aminotransferase" FT /translation="MTAQLNPQRDTRDYQQLDAAHHIHAFLDQKALNREGPRVMVRGDG FT LQLWDNDGKRYLDGMSGLWCTNLGYGRQDLAAAASRQLEQLPYYNMFFHTTHPAVVELS FT EMLFSLLPDHYSHAIYTNSGSEANEVLIRTVRRYWQILGKPQKKIMIGRWNGYHGSTLG FT STALGGMKFMHEMGGMLPDFAHIDEPYWYANGGELSPAEFGRRAALQLEEKILELGAEN FT VAAFVAEPFQGAGGMIFPPQSYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFG FT FQPDTLSIAKGLTSGYIPMGGLVLGKRIAEVLVEQGGVFAHGLTYSGHPVAAAVAIANL FT KALRDEGVVTRVREETGPYLQRCLREVFGDHPLVGEVQGAGFVAALQFAEDKVTRKRFA FT NENDLAWRCRTIGFEEGVIIRSTLGRMIMAPALVAGRAEIDELIDKTRIAVDRTAREIG FT VL*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene 251777..252835 FT /locus_tag="PA0222" FT CDS 251777..252835 FT /db_xref="GI:15595419" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248913" FT /localization_and_confidence="Periplasmic, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="MFKSLHQYAHVFSRLSLFGLAFAAAAQAQSQSLTVISFGGATKAA FT QEQAYFKPFERSGGGQVVAGEYNGEMAKVKAMVDVGKVSWDVVEVESPELLRGCDEGLF FT ERLDPARFGDPAQFVPGTFSECGVATYVWSMVMAYDSTKLARAPQSWADFWNVREFPGK FT RGLRKGAKYTLEVALLADGVKAEDLYKVLATPEGVSRAFAKLDQLKPNIQWWEAGAQPP FT QWLAAGDVVMSAAYNGRIAAAQKEGVKLAIVWPGSLYDPEYWAVVKGTPNKALAEKFIA FT FASQPQTQKVFSEQIPYGPVHKGTLALLPKTVQEALPTAPANLEGARAVDAEFWVDHGE FT ELEQRFNAWAAR*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_component: ATP-binding cassette (ABC) FT transporter complex, substrate-binding subunit-containing FT [goid GO:0055052] [evidence IEA]; FT " FT gene complement(252913..253794) FT /locus_tag="PA0223" FT CDS complement(252913..253794) FT /db_xref="GI:15595420" FT /function="Cell wall / LPS / capsule; Amino acid FT biosynthesis and metabolism" FT /protein_id="NP_248914" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable dihydrodipicolinate synthetase" FT /translation="MSASIHGIIGYTITPFAADGGLDLPALGRSIERLIDGGVHAIAPL FT GSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVM FT VLPISYWKLNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRIVREVDNVTM FT VKESTGDIQRMHKLRLLGEGRVPFYNGCNPLALEAFVAGAKGWCSAAPNLIPTLNGQLY FT QAVLDGDLEKARALFYRQLPLLDFILRRGLPTTIKAGLGLSGLEVGAPRLPVQALDTEG FT CRYLQGLLEELR*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_process: lysine biosynthetic process via FT diaminopimelate [goid GO:0009089] [evidence IEA]; FT " FT gene complement(253854..254636) FT /locus_tag="PA0224" FT CDS complement(253854..254636) FT /db_xref="GI:15595421" FT /function="Putative enzymes" FT /protein_id="NP_248915" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable aldolase" FT /translation="MATTLELPKDQLIQHALKQMKSSLGDNTWTDRQKLALTCRILFEA FT GHDSGLAGQITSRGPEAGTYYTQQLGLGFDEISAGNLLLVDEDLNVLHGHGMANPANRF FT HSWVYRARPDVNCIIHTHPLHIAALSTLEVPLQVSHMDLCPLYDDCAFLKDWPGVPVGN FT EEGEIISAALGDKRAILLSHHGLLATGASIEEACVIAVLLERAAKMQLLAMAAGEIKPI FT PPALAREAHDWISTPKRHGAAFNYYARRCLPRNSDCLS*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_process: L-fucose catabolic process [goid FT GO:0042355] [evidence IEA]; FT " FT gene 254791..255330 FT /locus_tag="PA0225" FT CDS 254791..255330 FT /db_xref="GI:15595422" FT /function="Transcriptional regulators" FT /protein_id="NP_248916" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable transcriptional regulator" FT /translation="MSMRLKLLRKKLGVTLETLAEKTGLTKSYLSKVERGLNTPSIAAA FT LKLAKALNVQVEELFSEESDGVDGYSIVRRDQRKSLSSGDDGPAYASLAQQIGARALLP FT FIVHPPRDFSHSTFKEHLGEEFIFVHEGQVEVDFMNQRIILERGDALHFNAQKPHRIRS FT LGETQAELLVVIHSDE*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene 255481..256332 FT /locus_tag="PA0226" FT CDS 255481..256332 FT /db_xref="GI:15595423" FT /function="Carbon compound catabolism" FT /protein_id="NP_248917" FT /localization_and_confidence="Cytoplasmic, Class 2 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="probable CoA transferase, subunit A" FT /translation="MAEILSLREAVRRFVHDGDSVALEGFTHLIPTAAGHELIRQGRKD FT LTLIRMTPDLVYDLLIGAGCAKKLVFSWGGNPGVGSLHRLRDAVEKGWPQPLEIEEHSH FT ADLANAYVAGASGLPFAVLRAYAGSDLPKVNPLIRSVTCPFTGEVLAAVPSVRPDVSVI FT HAQKADRKGNVLLWGILGVQKEAALAAKRCIVTVEEIVDELDAPMNACVLPSWALSAVC FT LVPGGAHPSYAHGYYERDNRFYQDWDPIARDRESFTAWIDEYIRGTEDFGAFQAKLAEG FT KR*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene 256329..257111 FT /locus_tag="PA0227" FT /gene_synonym="pcaJ" FT CDS 256329..257111 FT /db_xref="GI:15595424" FT /function="Carbon compound catabolism" FT /protein_id="NP_248918" FT /localization_and_confidence="Cytoplasmic, Class 2 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="probable CoA transferase, subunit B" FT /translation="MSSYSTNEMMTVAAARRLHNGAVCFVGIGLPSKAANLARLTSSPD FT VVLIYESGPIGAKPSVLPLSIGDGELAETADTVVPTGEIFRYWLQGGRIDVGFLGAAQV FT DRFGNINTTVIGDYRQPKVRLPGAGGAPEIAGSAKEVLIILKQSHRTFVDKLAFVTSVG FT HGEGGDSRQRLGLPGKGPVAIITDLCIMEPEAGSNEFVVTSLHPGVTREQVVEATGWAI FT RFAERVAETPAPSEVELAALRDLEARTAAAHGQKGSDE*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene 257108..258313 FT /locus_tag="PA0228" FT /name="pcaF" FT CDS 257108..258313 FT /db_xref="GI:15595425" FT /function="Fatty acid and phospholipid metabolism; Carbon FT compound catabolism" FT /protein_id="NP_248919" FT /localization_and_confidence="Cytoplasmic, Class 2 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="beta-ketoadipyl CoA thiolase PcaF" FT /translation="MSREVFICDAVRTPIGRFGGSLSAVRADDLAAVPLKALVERNPGV FT DWSALDEVFLGCANQAGEDNRNVARMALLLAGLPESVPGVTLNRLCASGMDAIGTAFRA FT IACGEMELAIAGGVESMSRAPYVMGKADSAFGRGQKIEDTTIGWRFVNPLMKEQYGIDP FT MPQTADNVADDYRVSRADQDAFALRSQQRAGRAQEAGFFAEEIVPVTIRGRKGDTLVEH FT DEHPRPDTTLEALARLKPVNGPEKTVTAGNASGVNDGAAALVLASAEAVEKHGLTPRAR FT VLGMASAGVAPRIMGIGPVPAVRKLLRRLDLAIDAFDVIELNEAFASQGLACLRELGVA FT DDSEKVNPNGGAIALGHPLGMSGARLVLTALHQLEKSGGRRGLATMCVGVGQGLALAIE FT RV*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: cellular catabolic process [goid FT GO:0044248] [evidence ISS]; FT GO_process: carbon utilization by utilization of organic FT compounds [goid GO:0015978] [evidence ISS]; FT GO_process: cellular lipid metabolic process [goid FT GO:0044255] [evidence ISS]; FT " FT gene 258463..259761 FT /locus_tag="PA0229" FT /gene_synonym="kgtP" FT /name="pcaT" FT CDS 258463..259761 FT /function="Membrane proteins; Transport of small FT molecules" FT /product_synonym="alpha-ketoglutarate permease" FT /protein_id="NP_248920" FT /note="GO_component: membrane [goid GO:0016020] [evidence FT ISS]; FT GO_process: transport [goid GO:0006810] [evidence ISS]; FT GO_function: solute:hydrogen symporter activity [goid FT GO:0015295] [evidence IEA]; FT " FT /db_xref="GI:15595426" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="dicarboxylic acid transporter PcaT" FT /translation="MTAPVHQYSNEERRKRIFAIVGASSGNLVEWFDFYVYAFCAIYFA FT PAFFPSDNPTVQLLNTAGVFAAGFLMRPIGGWMFGRIADKHGRKTAMLISVVMMCAGSL FT AIACMPTYASIGTLAPALLLLARMFQGLSVGGEYGTSATYMSEVALKGQRGFFASFQYV FT TLIGGQLLAVLVVVILQQLLSEDELRAWGWRIPFVIGAITAVIALWLRRSLNETASKST FT LERKESGTFAELFKHKRAFFTVLGFTAGGSLIFYTFTTYMQKYLVNTAGMSAKTASAVM FT TFALLAYMLMQPLFGMLSDRIGRKTSMLWFGTLGTLCTLPILLALKTVSSPYMAFFLII FT LALAIVSLYTSISGLIKAEMFPPEVRALGVGVSYAVGNAIFGGSAEYVALGLKSVGMEN FT VFYWYVSAMCLLALLVCVSLPDLRKVSYLNDEP*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene 259784..261163 FT /locus_tag="PA0230" FT /name="pcaB" FT CDS 259784..261163 FT /db_xref="GI:15595427" FT /function="Carbon compound catabolism" FT /protein_id="NP_248921" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="3-carboxy-cis,cis-muconate cycloisomerase" FT /translation="MSDVPANQLFDAYFMAAPMRAVFSDRGRLQGMLDFEAALARAEAR FT TGVVPATAVAPIEAACRAELYDPLALAEAVATAGNSAIPLVKALGRQVAAGDAEAERYV FT HLGATSQDAMDSGLVLQLRRALALLEQDLQRLAEVLADQAERHADTPLAGRTWLQHATP FT VTLGMKLAGLLGALTRHRQRLRELRPRLLVLQFGGASGTLAALGEQALPVAAALAEELG FT LALPEQPWHTQRDRLVEFASVLGLVAGSLGKFGRDVSLLMQTEAGEVFEPAGAGRGGSS FT TMPHKRNPVSSAVLIAAATRAPGLVSTLFAAMPQEHERSLGLWHAEWETLPELCCLVAG FT ALQQAIGLLEGLEVDAQRMRRNLGLTHGLVLAEAVSIALARRIGREAAHHLVEQCCRRA FT VEQRRELRAVLGEEARVSAELSGDELDRLLDPAHYLGQARAWVERALAEHHALGFEPHP FT A*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: cellular catabolic process [goid FT GO:0044248] [evidence ISS]; FT GO_process: carbon utilization by utilization of organic FT compounds [goid GO:0015978] [evidence ISS]; FT GO_process: catechol metabolic process [goid GO:0009712] FT [evidence RCA]; FT GO_function: 3-carboxymuconate cycloisomerase type II FT activity [goid GO:0018842] [evidence RCA]; FT GO_function: 3-carboxy-cis,cis-muconate cycloisomerase FT activity [goid GO:0047472] [evidence IEA]; FT " FT gene 261179..261970 FT /locus_tag="PA0231" FT /name="pcaD" FT CDS 261179..261970 FT /db_xref="GI:15595428" FT /function="Carbon compound catabolism" FT /protein_id="NP_248922" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="beta-ketoadipate enol-lactone hydrolase" FT /translation="VPTVRLADGDLNYSLEGPAGAPVLLLSNSLGTDLGMWDTQIPALT FT AHFRVLRYDTRGHGASLVTPGPYAIGQLGADVLALLDALELPRVHFCGLSMGGLIGQWL FT GIHAGERLGRLVLCNTAAKIASDEVWNTRIDTVLKGGEQAMRDLRDASVARWFTAGFAE FT REPAQVERIVAMLAATSPQGYAANCAAVRDADFREQLGLVQAPTLIVAGSHDAVTTPDN FT ARFMQARIADAQLVEFAAAHLSNVEAGDAFSRRLVDFLLSA*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: cellular catabolic process [goid FT GO:0044248] [evidence ISS]; FT GO_process: carbon utilization by utilization of organic FT compounds [goid GO:0015978] [evidence ISS]; FT GO_process: catechol catabolic process [goid GO:0019614] FT [evidence RCA]; FT GO_function: hydrolase activity, acting on ester bonds FT [goid GO:0016788] [evidence RCA]; FT GO_function: 3-oxoadipate enol-lactonase activity [goid FT GO:0047570] [evidence IEA]; FT " FT gene 261981..262382 FT /locus_tag="PA0232" FT /name="pcaC" FT CDS 261981..262382 FT /db_xref="GI:15595429" FT /function="Carbon compound catabolism" FT /protein_id="NP_248923" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="gamma-carboxymuconolactone decarboxylase" FT /translation="MDEKQRYEAGMQVRRAVLGAAHVERSLANLTPFNEEFQEMITRHA FT WGDIWTRPGLPRHTRSLVTIAMLIGMNRNEELKLHLRAAKNNGVSRDEIKEVIMQSAIY FT CGIPAANATFHLAESVWDELGVESQQASR*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: cellular catabolic process [goid FT GO:0044248] [evidence ISS]; FT GO_process: carbon utilization by utilization of organic FT compounds [goid GO:0015978] [evidence ISS]; FT GO_process: protocatechuate catabolic process [goid FT GO:0019619] [evidence RCA]; FT GO_function: carboxy-lyase activity [goid GO:0016831] FT [evidence RCA]; FT GO_function: 4-carboxymuconolactone decarboxylase activity FT [goid GO:0047575] [evidence IEA]; FT " FT gene 262557..263498 FT /locus_tag="PA0233" FT CDS 262557..263498 FT /db_xref="GI:15595430" FT /function="Transcriptional regulators" FT /protein_id="NP_248924" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable transcriptional regulator" FT /translation="MSRKLHIHAPAIHYFDMVRRCHSIREAARRLNVASSAVNRQILKL FT EDEIGAPLFDRLPGGLRLTGAGEIFARHVTVVLQDMERVRSELDALQGLRTGHVEIATI FT EAVTSDLLPCVLKAMRERYPDITVGVTLLGSQAIPEAVSSGAVDLGLAFALPRSADLQQ FT VSVGHFRLGAIVSPQHPLARHQAIAFADCVEHGLIMAKSELSIHHLLAPLQRRLREPRR FT AVLESSSLELSRQLARRGLGVAFQTRLGIEADIAQGELRFLPLKDNGGIHSDLGLYVRT FT GRYLPVAVDALARQIAEEVRLREREEARLNEA*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_process: positive regulation of transcription, FT DNA-dependent [goid GO:0045893] [evidence IEA]; FT " FT gene 263689..264522 FT /locus_tag="PA0234" FT CDS 263689..264522 FT /db_xref="GI:15595431" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248925" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MKKMMQGAAALIALVGAGESMALEWMSNSVGFRYGQQFTNPNNPD FT KFAKRIYSFTHADGYRYGSNFFNLDVFLSDNRDPRKGTDHGGSEVYAVYRHQLYASRVF FT DRPLGTGLVKDYAFTLGFDASRNNNLASAKKRALVFGPTLKFNGPGVLDLSLLYYREKN FT HFGVPGARHPDHTFDTTYMLNLTWMRPFKVGNHAAKFQGFVNYVGDKGEDYNDKHTAAE FT TLVRTALMVAALPGDKRQPNLWLGVGYEYWHNKFGVDGGTGSRTSTPTLNMEFTF*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(264964..266310) FT /locus_tag="PA0235" FT /name="pcaK" FT CDS complement(264964..266310) FT /db_xref="GI:15595432" FT /function="Membrane proteins; Carbon compound catabolism; FT Transport of small molecules" FT /protein_id="NP_248926" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="4-hydroxybenzoate transporter PcaK" FT /translation="MNSPSLPAVERLDVQAFINAQPLSPYQWRIVLLCFLIVFLDGLDT FT AAMGFIAPALTQDWGIDRASLGPVMSAALIGMVFGALGSGPLADRYGRKLVLVAAVFLF FT GLFSLASAYSTNVEQLLALRFLTGLGLGAAMPNATTLLSEYTPERLKSLLVTSMFCGFN FT LGMACGGFVSAKLIPLFGWHSLLLLGGLLPLVLAVVLLFRLPESARYLVVRNRGSERVR FT QVLAPIAPAQVALARSFHVPEQQTVQARNVFAVIFSGTYSAGTLLLWLTYFMGLVIVYL FT LTSWLPTLMRDSGASLEQAAFIGALFQFGGVLSAVAVGWAMDRFNPHKVIGLFYLLAGV FT FAWCVGQSLGQVTLLATLVLLAGMCINGAQSAMPSLAARFYPTQGRATGVSWMLGIGRF FT GAILGAWIGATLLGLGWNFEQVLTALVLPAALATAAVLLKGLVSHADAG*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: cellular catabolic process [goid FT GO:0044248] [evidence ISS]; FT GO_process: carbon utilization by utilization of organic FT compounds [goid GO:0015978] [evidence ISS]; FT GO_component: membrane [goid GO:0016020] [evidence ISS]; FT GO_process: transport [goid GO:0006810] [evidence ISS]; FT GO_process: aromatic compound catabolic process [goid FT GO:0019439] [evidence ISS]; FT GO_function: xenobiotic transporter activity [goid FT GO:0042910] [evidence IEA]; FT " FT gene 266616..267395 FT /locus_tag="PA0236" FT CDS 266616..267395 FT /db_xref="GI:15595433" FT /function="Transcriptional regulators" FT /protein_id="NP_248927" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable transcriptional regulator" FT /translation="MAGSLIERALGLLELLASDARGLPLQQLADRLDIPKSAAHRMLAE FT LIRLGYVRQDDDTSRYRLSTRLAALGFRFLASSGVVDLVQPVLDGLARETGELVRLGVI FT EGDRQTWIAKSQGATSGLRYDPDMGREAPLFYTASGHAWLASLSDKAALALVERQGVGA FT ARDFGPNAPRSRSELLRYLKRAREHGYAWQIECSAPGMAAMAALVRHPEDGRALGVLSV FT AGPSARFGEARMHELAPLLLAAAQDLSHASQASELFR*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene 267638..268681 FT /locus_tag="PA0237" FT CDS 267638..268681 FT /db_xref="GI:15595434" FT /function="Putative enzymes" FT /protein_id="NP_248928" FT /localization_and_confidence="Periplasmic, Class 3 FT (primary)" FT /product="probable oxidoreductase" FT /translation="LDAPLRIALIGAGNMGRQHYHRLQRIAGARLCAVADPQGQAFAAD FT TGVPWFGDHRRLLEEARPQAAIVANPNNLHVATALDCLAAGVPLLLEKPVGVQLDEVSE FT LVAVARRSGVPLLVGHHRRHNPLVVRARQLIAEGALGRLLSVTALWQLKKPDSYFEVAW FT RREPGAGMLLTNLIHDLDLLRHLCGEVREVQALAGNAIRGLPNEDNIALLLRFANGALG FT SLTGCDAAAAPWSWELAAGENPVYPRQAEQPCYLLAGTEGALSLPQLRRWRYAEARQGW FT HDPLAASEEAVATGDPLQRQLEHFVRVARGEEAPLMDATDAARTLALVEAVREAARSGR FT ACAPASF*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene 268704..269519 FT /locus_tag="PA0238" FT CDS 268704..269519 FT /db_xref="GI:15595435" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248929" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="MESRILSLAALTVLELSPPDMVEAAARAGYSHVGLRLVPATVEEH FT HYPLLADAGLRRRTLARLRDSGVRTLDVEILRLRPDTRVGEFAAVLEVGAEFGARYVLV FT AGNDDDERRSADNFAALCDLARPLGLDPHLEFMPWTGIRDLRQAARVVEAAARDNAGLL FT LDAFHFDRSASSLEDLRAIPPARLGYAQLCDVVGPRPTSMDEILRQAREERRFPGDGGL FT DLLALLRALPENLPLSLEVPALDLLARGVDGAERARLAIERTRALLARL*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 269669..270547 FT /locus_tag="PA0239" FT CDS 269669..270547 FT /db_xref="GI:15595436" FT /function="Membrane proteins" FT /protein_id="NP_248930" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="hypothetical protein" FT /translation="MNASTSPLPASDQTLRGILLICAAVFLFASHDGLSKFLSGFYPIV FT MVVWARYLVHTLLMVAVFVPRNGLAVIRSRRPLMQLARALCLIGTSLFFTTGLRYLPLA FT EATAVNFLAPLLVTALSVPLLKEKVSLGQWLAVLTGFIGVLFIVRPGGALFTPAALFPL FT GSALCFGLYQLLTRMLANSDSPTTSNFLAGIFNTLIMSLLVPFFWQTPSLLHGLMMIAL FT GGCGMGGHLLLTQAFRHAPPATLAPFSYGQIIFAGLLGLLVFGHVPDAWALLGILVICA FT SGLVVAWRRGR*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(270573..271838) FT /locus_tag="PA0240" FT /gene_synonym="opdF" FT CDS complement(270573..271838) FT /db_xref="GI:15595437" FT /function="Membrane proteins; Transport of small FT molecules" FT /protein_id="NP_248931" FT /localization_and_confidence="Outer Membrane, Class 2 FT (primary); Outer Membrane, Class 3 (primary)" FT /product="probable porin" FT /translation="MSHPSHVRALCASLCLGAGLPVHAGHVHAGQGFLEDAKASLTARN FT FHLHRNFVGDASQGKAEEWTQSFILDARSGFTQGSVGFGLDVLGLYSLKLDGGKGTAGT FT QLLPIHDDGRPADDFGRLAVAGKLRVSNSELKIGEWMPVLPILRSDDGRSLPQTFRGGQ FT LSANEIAGLTLYAGQFRGNSPRNDASMQDMSLFGRPAATSDRFDFAGGEYRFNGERSLL FT GLWNAELKDIYRQQYLQLQHSQPLGDWLLGANLGGFRGRDAGSARAGKLDNRTVSALFS FT ARYGLHTLYLGLQKVSGDDGWMRVNGTSGGTLANDSYNASYDNPGERSWQLRYDFDFVG FT LGLPGLTFMTRYLHGDHVRLAGVTDDGSEWGRESELGYTLQSGAFKRLNVRWRNSSQRR FT DWGSNTRFDENRLIVSYPLSLL*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene complement(271904..273229) FT /locus_tag="PA0241" FT CDS complement(271904..273229) FT /function="Membrane proteins; Transport of small FT molecules" FT /product_synonym="probable MFS transporter" FT /protein_id="NP_248932" FT /db_xref="GI:15595438" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 2 (primary); Cytoplasmic Membrane, Class 3 (primary)" FT /product="probable major facilitator superfamily (MFS) FT transporter" FT /translation="MIHSSSSRLLAADAPRESRGGRIRNAFAVGRTRWGMLALVFFATT FT LNYIDRAALGVMQPILAEKMSWTAMDYANINFWFQVGYAIGFILQGRFIDKVGVKRAFF FT LAVLLWSLATGAHGLATSAAGFMVCRFILGLTEAANYPACVKTTRLWFPAGERAVATGI FT FNAGTNVGAMVTPALLPLILGVWGWQAAFLCMSALGLVWLVFWWRNYYNPEEHPRVKQS FT ELEYIQQQEEPPATRVPFSQILRRRGTWAFALAYSITAPVFWFYLYWLPPFLNQQYGLG FT ISVTQMGIPLILIWLTADFGSVGGGILSSWLIGRGMPAIRARLLSMLLFACTIVGVVFA FT ANASGLWIAVLAIALAVGAHQAWTANIWSLVMDYTPKHLMSTVFGFGGMCAALGGMFMT FT QIVGGVLTATNNNYAVLFTMIPAMYFIALTWLYFMAPRRIEA*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene 273775..275679 FT /locus_tag="PA0242" FT CDS 273775..275679 FT /db_xref="GI:15595439" FT /function="Putative enzymes" FT /protein_id="NP_248933" FT /localization_and_confidence="Cytoplasmic, Class 2 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MQRSIATVSLSGTLPEKLEAIAAAGFDGVEIFENDLLHYDGSPRD FT VRRLCADLGLEILLFQPFRDFEGCRRERLGRNLERAERKFDLMQELGTDLVLVCSNVAA FT DALGEPALLADDLRQLAERAAVRGLRIGYEALAWGRQVNTWEQAWDLVRRADQANLGLI FT LDSFHTLSLDGDPRGIADLPGEKIFFVQMADAPLLAMDVLEWSRHFRCFPGQGGFDLAG FT FLAPVVASGYRGPLSLEVFNDGFRAAPTRANAVDGLRSLLYLEEKTREHLQRQTPHVAV FT DELFAPPPASLCDGIEFLEFAVDETLGARLGQWLQRLGFARAGEHRSKNVSLLRQGDIN FT LVLNAEPYSFAHGFFEAHGPSLCATALCVRDAGQALERARAYGGQPYRGLLGPNEREIP FT AVRALDGSLLYLVERHTEGRSIYDSDFVTNDADTSGLGLRRVDHVALALPAEGLDSWVL FT FYKSLFDFGADDEVVLPDPYGLVTSRAVRSPCGSVRLPLNISEDRNTAIARSLSSYRGS FT GVHHIAFDCADIFAAVAQAKEAGVALLEIPLNYYDDLAARFDFDDEFLSELAYYNVLYD FT RDAQGGELFHVFTEPFEERFFFEILQRRHGYAGYGAANVPVRLAAMAQARRGVRRVKL* FT " FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_process: tyrosine catabolic process [goid FT GO:0006572] [evidence IEA]; FT " FT gene 275772..276440 FT /locus_tag="PA0243" FT CDS 275772..276440 FT /db_xref="GI:15595440" FT /function="Transcriptional regulators" FT /protein_id="NP_248934" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable transcriptional regulator" FT /translation="MSKPDPAVVEESAPRGKGRKNNPEKTRQDILRAAIDEFVAQGLSG FT ARVDAIAERTHTSKRMIYYYFGSKEQLYQAVLEKLYSDIRGIEGTLRLGALPPAKAMEK FT LVEFSFDYHDRHVDFVRIISIENIHKGEHIASSELVQSVNSSIVQSIAEILRRGEAEGV FT FRAGLEALDVHMLISSFCFYRVSNRYTVSRIFRTDLHDAEVRQRHRRMIGEAVLRYIRA FT *" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene complement(276480..277334) FT /locus_tag="PA0244" FT CDS complement(276480..277334) FT /db_xref="GI:15595441" FT /function="Putative enzymes" FT /protein_id="NP_248935" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="MSAPRSVLAGLIGAGIQASRTPALHEREGDAQGIRYLYRLIDLDP FT LGKSADDLEFLLAAASDLGFTGLNVTFPCKQAIIPLLDDLSAEARGIGAVNTVVLRDGR FT RIGHNTDCLGFAEGFRRGLADAPRQRVVQMGAGGAGAAVAHALLAEGVERLVLFDVDPA FT RAQALADNLNQHFGAPRALAGSDLAGALGDAQGLVNTTPVGMAKLPGMPVPAELLRADL FT WVAEVIYFPLETELLRQARALGCRTLDGGTMAVFQAVKAFELFSGVTADAARMQAHFAS FT LGD*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_process: chorismate biosynthetic process [goid FT GO:0009423] [evidence IEA]; FT " FT gene complement(277331..277777) FT /locus_tag="PA0245" FT /gene_synonym="aroD2" FT /name="aroQ2" FT CDS complement(277331..277777) FT /function="Amino acid biosynthesis and metabolism" FT /product_synonym="dehydroquinase" FT /protein_id="NP_248936" FT /note="GO_function: fumarylacetoacetase activity [goid FT GO:0004334] [evidence ISS]; FT GO_process: amino acid metabolic process [goid GO:0006520] FT [evidence ISS]; FT GO_process: L-phenylalanine biosynthetic process [goid FT GO:0009094] [evidence ISS]; FT GO_process: tyrosine biosynthetic process [goid FT GO:0006571] [evidence ISS]; FT GO_process: tryptophan biosynthetic process [goid FT GO:0000162] [evidence ISS]; FT GO_process: chorismate biosynthetic process [goid FT GO:0009423] [evidence IEA]; FT " FT /db_xref="GI:15595442" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="3-dehydroquinate dehydratase" FT /translation="MTRTVLVLNGPNLNLLGTREPQTYGRRTLGEIADECAAFAETRGF FT AVDFRQTNQEGQLLDWIHQARGRVAGIVINPAAWTHTSVALRDALAAVELPVVEVHLSN FT VHQREAFRHHSYVSPVALGVICGFGSLGYRLALEHFAERFEAAA*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene complement(277894..279399) FT /locus_tag="PA0246" FT CDS complement(277894..279399) FT /function="Membrane proteins; Transport of small FT molecules" FT /product_synonym="probable MFS transporter" FT /protein_id="NP_248937" FT /note="GO_process: response to drug [goid GO:0042493] FT [evidence IEA]; FT " FT /db_xref="GI:15595443" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="probable major facilitator superfamily (MFS) FT transporter" FT /translation="LSDLAQNPPAVRTVLAGLMLSIFLSALDQTIVAVSLPAISADYAD FT LDLLAWVISAYMVAMTVSMPIYGKLGDLYGRRRLMLFAIVVFTAASLLCGLAQSMGQLV FT LARVLQGIGAGGLMAVSQAIIGDIVPPRERGRYQGYFSSMYAIASVAGPVLGGLLTEYL FT SWHWVFWINLPIGLLALAISRRTLVGLPVPRRQPVIDYLGIVLMVVGLTALLLAITQIG FT QGAAWSDPALLGLFALAALALLLFVAQERRFREPLVPMQLFAVRAATLSWLVAFFASFQ FT AISLTVLVPLRYQSVTGAGADSAALHLLPLVMGLPLGAYCCGRLTASLGRYKPLILLGA FT VLLPCGIAGLALVPVGDHWLSGLCMLLTGIAIGTQFPTSLVAAQNAVEQRHIGVATSNA FT TLFRSLGGAVGVALMSAILLALLKHLRIGGGLDQGFSESALLSSLDAASGPARVILQHV FT LADAFKVLFLVNAAVALLGLAVASALPDMTLRGRGATQPTAGE*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene complement(279574..280758) FT /locus_tag="PA0247" FT /name="pobA" FT CDS complement(279574..280758) FT /db_xref="GI:15595444" FT /function="Carbon compound catabolism" FT /protein_id="NP_248938" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="p-hydroxybenzoate hydroxylase" FT /translation="MKTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRA FT GVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQRRRIDLKRLSGGKTVTVYGQTE FT VTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHG FT ISRQSIPAERLKVFERVYPFGWLGLLADTPPVSHELIYANHPRGFALCSQRSATRSRYY FT VQVPLSEKVEDWSDERFWTELKARLPSEVAEKLVTGPSLEKSIAPLRSFVVEPMQHGRL FT FLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYREGRGELLERYSAICLRRIWKAE FT RFSWWMTSVLHRFPDTDAFSQRIQQTELEYYLGSEAGLATIAENYVGLPYEEIE*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT /note="GO_process: cellular catabolic process [goid FT GO:0044248] [evidence IDA]; FT GO_process: carbon utilization by utilization of organic FT compounds [goid GO:0015978] [evidence IDA]; FT GO_function: aromatic-amino-acid transaminase activity FT [goid GO:0008793] [evidence IDA]; FT GO_process: benzoate metabolic process [goid GO:0018874] FT [evidence IEA]; FT " FT gene 280936..281802 FT /locus_tag="PA0248" FT /gene_synonym="pobR" FT CDS 280936..281802 FT /db_xref="GI:15595445" FT /function="Transcriptional regulators" FT /protein_id="NP_248939" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable transcriptional regulator" FT /translation="MTDSTRDVPVFKLYGAPLEWPTPDLLHCESIPARSRLHDWEIKPH FT RHADLAQLLYVRKGWAQLQVEGEPTRVEQPSIQFVPPLCIHGFQFSERIDGYVLTLAAP FT LLARLQAHLGAQRQALEAPGLYPVGADRRYIDTLFDAIDGEYAGAAPARELLLQSLIGV FT LAVWLGRQVMVRRAEARPGRGQEYLSAFSQLVERHFREHLGIDEYARRLGISPAHLNGV FT ARRLSGQTALGIVHQRLLLEAKRDLVYTAMTVNEIADRLGFSEPAYFTRFFKRLSGVSP FT SVFRKGD*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_process: regulation of transcription, DNA- FT dependent [goid GO:0006355] [evidence IEA]; FT " FT gene complement(281799..282245) FT /locus_tag="PA0249" FT CDS complement(281799..282245) FT /db_xref="GI:15595446" FT /function="Putative enzymes" FT /protein_id="NP_248940" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="probable acetyltransferase" FT /translation="MSSPPKIRRYIPADRDATLAIWLEASRVGHGFLGEAELQKQKALV FT RDHYLDASETWLALDGDTPLGFIGLLDAFIGGLFVAPTAHGRGIGRQLVEHAATLKGAL FT EVEVYAANREALGFYARCGFVESGRRPRDDEGRALEIVQLRREH*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_process: ribosome biogenesis [goid GO:0042254] FT [evidence IEA]; FT " FT gene complement(282323..282757) FT /locus_tag="PA0250" FT CDS complement(282323..282757) FT /db_xref="GI:15595447" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248941" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="conserved hypothetical protein" FT /translation="MKTVAQLLNAKQNQQVYTIGADEMVLDALRLMAEKNIGALLVVNH FT GEVVGVVSERDYARKMVLKGRSSIGTPISAIMSAPVVSVDSKQSVDTCMNLMTDRHLRH FT LPVVEDGQLLGLLSIGDLVKAAIAEQAELIQQLEQYIRGD*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_process: purine ribonucleotide biosynthetic FT process [goid GO:0009152] [evidence IEA]; FT " FT gene complement(282912..283553) FT /locus_tag="PA0251" FT CDS complement(282912..283553) FT /db_xref="GI:15595448" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248942" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="MNDYIARLREKYDAHFGCAPAMTLDCRDFWRHCVAAPEMAVFAYR FT LESTRRPHHVVITAGMSQAPMHFAPYMGKARWSAELICYLDELGGDDLRHLQWLAGLPF FT HERLALGHGHAVAFGFPLYEQSLLRHFLLLPAPLEEDASLFDGFALSAHPVDLLWVVPL FT TEQEYQVNVKEHLEGIARLLTDAGHPLSLDRHRYCYVTGQSPEGLARVLH*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(283818..284105) FT /locus_tag="PA0252" FT CDS complement(283818..284105) FT /db_xref="GI:15595449" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248943" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MGGLRKPIRPAMPRHPHTTLLLCLCLTLPGCESGRSYSLSEGAPV FT TGIRIQRDDRSPLQRLRDCERQGCSERQKIDPFTPDPDYLRAEGHFPLPW*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(284197..284673) FT /locus_tag="PA0253" FT CDS complement(284197..284673) FT /db_xref="GI:15595450" FT /function="Transcriptional regulators" FT /protein_id="NP_248944" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable transcriptional regulator" FT /translation="VTGPMTETNALGLPQGPLYLMTEIVRQRERQLTALLAPLELGLHE FT WRALRIIHAFDGDVPMSVLIEHSQTDRTALGRTIERLVRRGWVSRLPDPDDGRAVLVRR FT SPAAQAVFEQALAQVAGLDERLLAGLGSGPEEEALTLVLGKLLRAFDGLSRVRQ*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene complement(284714..286204) FT /locus_tag="PA0254" FT CDS complement(284714..286204) FT /db_xref="GI:15595451" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248945" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="conserved hypothetical protein" FT /translation="MNRSALDFRHFVDHLRRQGDLVDVHTEVDANLEIGAITRRVYERR FT APAPLFHNIRDSLPGARVLGAPAGLRADRARAHSRLALHFGLPEHSGPRDIVAMLRAAM FT RAEPIAPRRLERGPVQENVWLGEQVDLTRFPVPLLHEQDGGRYFGTYGFHVVQTPDGSW FT DSWSVGRLMLVDRNTLAGPTIPTQHIGIIREQWRRLGKPTPWAMALGAPPAALAAAGMP FT LPEGVSEAGYVGALVGEPVEVVRTQTNGLWVPANTEIVLEGEISLDETALEGPMGEYHG FT YSFPIGKPQPLFHVHALSFRDQPILPICVAGTPPEENHTIWGTMISAQLLDVAQNAGLP FT VDMVWCSYEAATCWAVLSIDVQRLAALGTDAAAFAARVAETVFGSHAGHLVPKLILVGN FT DIDVTEIDQVVWALATRAHPLHDHFAFPQIRDFPMVPYLDAEDKARGSGGRLVINCLYP FT EQFAGQMRAATASFRHAYPTALRRRVEERWSDYGFGDA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_function: carboxy-lyase activity [goid FT GO:0016831] [evidence IEA]; FT " FT gene complement(286338..287024) FT /locus_tag="PA0255" FT CDS complement(286338..287024) FT /db_xref="GI:15595452" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248946" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="conserved hypothetical protein" FT /translation="MVGSSARRLRLRRTRGRVGLGLVAGLSVLAGMTDAIGFLATGDFV FT SFMSGNTTRLAVSLGEGDFGGLVRLSVALASFVVGNALGVILARFSGRRAAPILVCCAM FT LLALSAVWPFDWNVPALVAAILAMGMLNAVVEQVNGLPIGLTYVTGALSRFGRGLGRWL FT LGERRNGWRVQLVPWSGMCVGAVLGALLEQQLGLAAMAASAALAALLALLALVIPRPWQ FT MDYMVR*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(287188..288120) FT /locus_tag="PA0256" FT CDS complement(287188..288120) FT /db_xref="GI:15595453" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248947" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="MRSWHGVVTKIAKQGKGAVVKNRLGPEELLVPFTVSTLVEVDLDA FT RIYGTDVDDTPWAEGDERKEVLVGTEVELLTDTDTFPTHASQVLSANFRFALDIVKGGL FT SGPVRKGAVLVIYHDFQQEIRRGDSGSAFAEAVVAYARNKLYKPAFAIKADTNYAQLVR FT DLGKVAAESGEQYFIDTILIATHGTAGQLWLGNPHGDSTADVMARRVQGKQFVEPQAFG FT ATLLELFGKELAIALYGCDFAGDEDGEAAALELRIAANARAVYAGKGTVYLNASKEGRS FT TVTCSKAMVVYRTDKIEVLGGNQVPVFDI*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(288384..289175) FT /locus_tag="PA0257" FT CDS complement(288384..289175) FT /db_xref="GI:15595454" FT /function="Related to phage, transposon, or plasmid" FT /protein_id="NP_248948" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MSRQAYYKRNRAADSKARQADRVVEFVQQIRIRQPRLGTRKLHYL FT LHCQPDRRLQIGRDRLFQVLGERRLLVLPKRAYHKTTQSFHRFYRHPNLLKSGPNQVVP FT SGPEHVWAADITYLPASSGPLYLSLVTDAYSRKIVGHHVHESLHAKSVAQAFRQALRKR FT QRRQSLVHHSDRGIQYFSALYQSLHARHGVQCSMTDGYDCYQNALAERIYGILKTELLL FT SSPENLEQARKMVAEAVQIYNTERPHMALKNKTPDAVHRAF*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(289205..289390) FT /locus_tag="PA0258" FT CDS complement(289205..289390) FT /db_xref="GI:15595455" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248949" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MSDPKTLTPEQRIKELEQQLELMSQKDQFFETVVDVLKNDYGVSV FT VKKRSGKSSRKVKSQD*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(289562..291004) FT /locus_tag="PA0259" FT CDS complement(289562..291004) FT /db_xref="GI:15595456" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248950" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MSADAYHPPTTSPRLETLDVLSIGMSLDVFRQGQVWKALQEQNAA FT QAEALHVGSILPMDPKKYPTSADDKDMAYEKRQADALELGLKNFLEKWPIPTVTVVRGW FT DPSTPNLRFTPEETRESLSVKVNDLRVPAGLHWHRIANLQDGIICNDTPEGVLEALFSL FT FERNPDLPAVLVYANEGISMAGALSSRDVTLKSLGAVSGPRIPGTLTDAMVALIVGRPE FT RVDWLRQFAPYTKVNENRIDPEFRGWGWRKPPVEFRPTPFIPQPWTERALEQWDALPVL FT ARLHRPVSVPLTHPDTGERLKREALTAQLAAAWKTASAGLRPAPARLFYDGGLNATPLA FT ELTPALGAAQSSLDLLDSRESYDLTQRLGDTGAASPFVGITLATMASYLNGDSSMVMPL FT RRKDQATLIGISSPTPGKKPVHDPFGVDLLPQTASGDGPPPSADPVAPASRLTTRLPPG FT EDYALEEFLSSLKPSTDWQDDL*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(291154..293304) FT /locus_tag="PA0260" FT CDS complement(291154..293304) FT /db_xref="GI:15595457" FT /function="Hypothetical, unclassified, unknown; Membrane FT proteins" FT /protein_id="NP_248951" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MNDRVRSRTIVSAQSITLPKGGDVHLVPPPPKPCVTIVVHGVNDL FT AGCYERIERGLCQGLNERLDMPPTLPGGQANPGYLTPAGYSLPADDEGKAENPDVVYYR FT RKFASGAGGAAVRSVVVPFYWGFREEEQYINKTAAHGEWLDRNGNRLDKSGTKEGGQFV FT NATTNLPDMWGQGFNGKLFGFISLDWFGGTMTHPLFSAAGRKYMVLAAMRLAMLIKIIR FT KRYPDDTINVVGHSQGTLLTLLAHAFLKDDGVAPADGVIMLNSPYGLFEPLNEKLQGWS FT SQQTREARLATLKGILEFICGRRHPVPALSSVALRNCQGYGAIGGPGWVGGQGCQTTID FT GERLSFDERDNRGSVYLYFTPQDQTVGLANVQGIGWRGIAEQVKGLPGRTGLPQGFHQR FT IFTVRKRNGEKEKIGGHAPPHVYPLLLAGEKTWEDTGLGGKDRFGRANFDQGDSVLLTA FT PRLPLPTEARFDFDGAVTAPGENSASGVYQVRDTLDPIDAAIGVSNGGWKEKDSGHAVA FT QQVDAALAYRYGRDARSVERALNEGKELAQQTHVFSARELGTGMVLVTRAETPYEARLR FT LQTAEGHLEPLSFHSAIPNNPEHNRRVLAYDLAIGAGDSVDDVVFYQYLCRVADWRLDW FT KASDKGIFSQGDASVDLPDEEVRALYRAEESKNSQLIDATVAYRKSGEFPVVVGNRLPS FT LVGTQTILDRYHEQAVRFGGTI*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(293301..293798) FT /locus_tag="PA0261" FT CDS complement(293301..293798) FT /db_xref="GI:15595458" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248952" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MKCKTLLIACLFGLGSAQALAVSKLPPQIPVHAGSGRVTLDLRPL FT LAETNDVEITRVSVCRRVGSHCQETLWRIELPPGWRAGEIEVFGDYPGSSVLLRRPERL FT QPDGSYNAFIHFNERSRRHRQTVSSIAVEFCLAGEPGNWMLLDEATCLARRNAEERQGE FT KP*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(293802..296861) FT /locus_tag="PA0262" FT CDS complement(293802..296861) FT /db_xref="GI:15595459" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248953" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="conserved hypothetical protein" FT /translation="MRQRDLKFTFVVGEGKLAFDVVEFELEEALCEPFRLNLKLASDKN FT AIDFKQVLDQPGTFTLWQDGRPARYVHGIVSHFTQGSSGFRRTRYELLLEPQLARLELC FT CNWRIFQEKSVPEILQALLKEHRVLDYEQRIYHEHLPREYCVQAGDSDHYLHDRLAFEE FT GLVYYFRFDEHRHTLVCSDRLYVQERIAGGPVLFSAQPEGDNPQPVLHSFRYSENVRTA FT RQTQRDYSFKRPTYDQEHHLAGEALEHQGSSYERYDYPGRYKRSGAGRPFTESRLRGHR FT RDARVASVSGDDPRLIPGHAFALEGHPRADFNAWWRPVRVVHRGTQYAGQEEESADAPL FT GVSYDLRAELVPEDVEWRPAPLPRPRIDGPQIATVVGPAGEEIHCDEWGRVKVQFPWDR FT EGRHDEFSTCWIRVAQNWAGADWGHMAIPRIGQEVIVDYLDGDCDQPIVTGRTYRATNR FT PPYALPDHKILSTIKSKEYKGSRANELRIDDTTAQISAALMSDHGASALHLGYLTHPRP FT EGGKPRGEGFELRTDEHGAVRAAKGLLLSTEEQLRAGAGHLDRGVVVQVLEAALELARE FT LGDYAGEHQGVGHDAAPQQTLQEAVRDLGHGANDESGKSNGGKPAIALSGPAGIAAATP FT ASLTLAAGEHVDSVARQNQQVTAGQKVVINAGSDIGLFAQGGELRQITHQGPMLLQAQK FT NDIRLEAKQSVEVSASQQHVLVTAKEHITLMCGGAYLTLKGGNIELGMPGNFVVKAAKH FT SHVGAASLEAELPQFEVGETQRRFVLKQLDGQTAMPNVPYTITMANGEVIEGVTDAEGA FT TQLLQKDAMNIAKVDMKHTKSPASAVAGIAAAVGAAVAVGKLLGGPDAEAGRALSEGEI FT SLAKGVFGDSIDYSTVRLRDEDYVPWQGKDYVMAPNGHIYFGEELRGVADWSLESLQRQ FT GLFIHEMTHVWQHQHGVNVLLVGAYQQARQFLLGDQYAYRLEPGKTLKDYNIEQQGDIV FT RDYFLEKNEFGEASANSRFAGVLKNFPTGY*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_process: protein secretion by the type VI FT secretion system [goid GO:0033103] [evidence IEA]; FT " FT gene complement(297043..297561) FT /locus_tag="PA0263" FT /name="hcpC" FT CDS complement(297043..297561) FT /db_xref="GI:15595460" FT /function="Secreted Factors (toxins, enzymes, alginate)" FT /protein_id="NP_248954" FT /localization_and_confidence="Extracellular, Class 3 FT (primary)" FT /product="secreted protein Hcp" FT /translation="MATPAYMSITGTKQGLITAGAFTEDSVGNTYQEGHEDQVMVQGFN FT HEVIIPRDPQSGQPTGQRVHKPVVITKVFDKASPLLLAALTSGERLTKVEIQWYRTSAA FT GTQEHYYTTVLEDAIIVDIKDYMHNCQDPGNAHFTHLEDVHFTYRKITWTHEVSGTSGS FT DDWRSPVAG*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: interaction with host via secreted FT substance [goid GO:0052048] [evidence IEA]; FT " FT gene complement(298816..298892) FT /locus_tag="PA0263.1" FT tRNA complement(298816..298892) FT /function="Non-coding RNA gene" FT /product="tRNA-Arg" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene complement(299081..299497) FT /locus_tag="PA0264" FT CDS complement(299081..299497) FT /db_xref="GI:15595461" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248955" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="VSSGSTSTTPRAWLSGSVVTGKCCLLVIRKGQRPGVPFPAPCASG FT VAVTGRPPCATGGRGRTRPPTGVGEDTKDSCGKGIADETPRRHHGGPATRKAGRATGRS FT ERGHSRGTRPAELMPIPRSPVVVALGAFEISNES*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 299522..300973 FT /locus_tag="PA0265" FT /name="gabD" FT CDS 299522..300973 FT /db_xref="GI:15595462" FT /function="Central intermediary metabolism; Amino acid FT biosynthesis and metabolism; Carbon compound catabolism" FT /protein_id="NP_248956" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="succinate-semialdehyde dehydrogenase" FT /translation="MQLKDAKLFRQQAYVDGAWVDADNGQTIKVNNPATGEIIGSVPKM FT GAAETRRAIEAADKALPAWRALTAKERANKLRRWFDLMIENQDDLARLMTIEQGKPLAE FT AKGEIAYAASFLEWFGEEAKRIYGDTIPGHQPDKRIIVIKQPIGVTAAITPWNFPSAMI FT TRKAGPALAAGCTMVLKPASQTPYSALALAELAERAGIPKGVFSVVTGSAGEVGGELTS FT NPIVRKLTFTGSTEIGRQLMAECAQDIKKVSLELGGNAPFIVFDDADLDAAVEGALISK FT YRNNGQTCVCANRLYVQDGVYDAFVDKLKAAVAKLNIGNGLEAGVTTGPLIDAKAVAKV FT EEHIADAVSKGAKVVSGGKPHALGGTFFEPTILVDVPKNALVSKDETFGPLAPVFRFKD FT EAEVIAMSNDTEFGLASYFYARDLARVFRVAEQLEYGMVGINTGLISNEVAPFGGIKAS FT GLGREGSKYGIEDYLEIKYLCLGGI*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: amino acid metabolic process [goid FT GO:0006520] [evidence ISS]; FT GO_process: cellular catabolic process [goid GO:0044248] FT [evidence ISS]; FT GO_process: carbon utilization by utilization of organic FT compounds [goid GO:0015978] [evidence ISS]; FT GO_process: metabolic process [goid GO:0008152] [evidence FT ISS]; FT GO_function: oxidoreductase activity, acting on the FT aldehyde or oxo group of donors, NAD or NADP as acceptor FT [goid GO:0016620] [evidence IEA]; FT GO_process: polyamine catabolic process [goid GO:0006598] FT [evidence ISS]; FT " FT gene 301218..302498 FT /locus_tag="PA0266" FT /name="gabT" FT CDS 301218..302498 FT /function="Central intermediary metabolism; Amino acid FT biosynthesis and metabolism; Carbon compound catabolism" FT /product_synonym="gabA transaminase" FT /protein_id="NP_248957" FT /note="GO_process: amino acid metabolic process [goid FT GO:0006520] [evidence ISS]; FT GO_process: cellular catabolic process [goid GO:0044248] FT [evidence ISS]; FT GO_process: carbon utilization by utilization of organic FT compounds [goid GO:0015978] [evidence ISS]; FT GO_process: metabolic process [goid GO:0008152] [evidence FT ISS]; FT GO_process: gamma-aminobutyric acid catabolic process FT [goid GO:0009450] [evidence IEA]; FT GO_process: polyamine catabolic process [goid GO:0006598] FT [evidence ISS]; FT " FT /db_xref="GI:15595463" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="4-aminobutyrate aminotransferase" FT /translation="MSKTNESLLKRRQAAVPRGVGQIHPVVAERAENSTVWDVEGREYI FT DFAGGIAVLNTGHLHPKVIAAVQEQLGKLSHTCFQVLAYEPYIELAEEIAKRVPGDFPK FT KTLLVTSGSEAVENAVKIARAATGRAGVIAFTGAYHGRTMMTLGLTGKVVPYSAGMGLM FT PGGIFRALAPCELHGVSEDDSIASIERIFKNDAQPQDIAAIIIEPVQGEGGFYVNSKSF FT MQRLRALCDQHGILLIADEVQTGAGRTGTFFATEQLGIVPDLTTFAKSVGGGFPISGVA FT GKAEIMDAIAPGGLGGTYAGSPIACAAALAVLKVFEEEKLLERSQAVGERLKAGLREIQ FT AKHKVIGDVRGLGSMVAIELFEGGDTHKPAAELVSKIVVRAREKGLILLSCGTYYNVIR FT FLMPVTIPDAQLEKGLAILAECFDELA*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene 302824..304023 FT /locus_tag="PA0267" FT CDS 302824..304023 FT /db_xref="GI:15595464" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248958" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="MSAAKKAPVILIADPDPWSRDLLGQLVLGVRCDARLVLCGDGGEA FT LAHCRRRRFALILAELNLPQVDGFELLREARLRRSVAEQPFILISDRADQASVRAAVAL FT APTAYLVKPFQAENLMQRLRGLLLKGDEVVACPLPERDAGENLEAFLERARDSAEGAPL FT LADVRAASDRCLSAEEHPLRVLEAEFGRDPQITAGLIAAANSAARHVGPACQTLGQALR FT RLGLGHSLNLVLGFSLQRAIQLGEPLLAERAMHFWDLSQRCADIAWELADALGADVERC FT YTAGLLHRLGDLALLRTLQDWCDGGGALDEARLDELLGRFGASFGSALRARWRLPLELR FT RLIAAAYQFGGVLSREELILSLATQAASLPEDDAEQLAESKAARMLGLDGERLAKLLQP FT *" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(304177..305598) FT /locus_tag="PA0268" FT CDS complement(304177..305598) FT /db_xref="GI:15595465" FT /function="Transcriptional regulators" FT /protein_id="NP_248959" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable transcriptional regulator" FT /translation="MELQLILDGRHDLVGQLYRQLRDAILHGRLATGDRLPATRYLAER FT LEVSRKTVSEAYERLASEGFLEGRVGSGTFVARGPAGEAPPQRADGPLRPAARWARIEP FT QSGLMDQRAPLRYSFAGGTTDKRRFPFDTWRTCVLQALRLQQRSPAFYKETEGDPELRL FT AISRYLAINRAVQCDWNALMVTQGAQQGLDLLARVMLDPGDLAVVEEPGYPPARASLLA FT TGAEVRGVPVDAEGLRVDLLPDNAKLVYVTPSHQFPLGMPMSLERRLQLLDWAQRHRAL FT IIEDDYDSEYRFDGRSLESLRSLDRNGQVAYLGTFSKTLFPELRLGYLLPPASLREAVL FT AARKLVDRHSETLQQRALALFIQRGDFARHTRRLQREYAQRRGRLLERLHGDLSPWLEA FT LPAVAGIHLAARCREPLDVLRIARHLRQQGLEVGTLPPFYAETPAQAGFLFGFGCIERD FT DIDPALDLLRAELRR*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_process: amino acid derivative biosynthetic FT process [goid GO:0042398] [evidence IEA]; FT " FT gene 305725..306162 FT /locus_tag="PA0269" FT CDS 305725..306162 FT /db_xref="GI:15595466" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248960" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="conserved hypothetical protein" FT /translation="MTTRLEWAKASPDAYAAMLGLEKALAKAGLERPLIELVYLRTSQI FT NGCAYCVNMHANDARKAGETEQRLQALCVWQETPYFTPRERAALAWTEQLARLSQGALP FT HGLLDELREHFDDKEIAELTLAVSAINAWNRFGVGMGMQPE*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 306174..306581 FT /locus_tag="PA0270" FT CDS 306174..306581 FT /db_xref="GI:15595467" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248961" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MKANRSIACLLLAALPTLASAHVAEKVETLHDQALAEIPGHRGLM FT LTVSFKPGQVSAPHVHPGSVFVYVLEGTVQTQLEGGSVETYTVGQSWYEPANVPHLLAR FT NPDPMKPAKLLVWELLKEGDPILKPLERGAH*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 306615..306899 FT /locus_tag="PA0271" FT CDS 306615..306899 FT /db_xref="GI:15595468" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248962" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MSASQVIRIRARNGQSERLGLRLQQLVEPGLEAPGCLEYQVRRDA FT LEPDLWLVCSQWREAQQMFDYLAGGIQQVFAEVLWRSLAASLEVQDDAG*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(306896..307828) FT /locus_tag="PA0272" FT CDS complement(306896..307828) FT /db_xref="GI:15595469" FT /function="Transcriptional regulators" FT /protein_id="NP_248963" FT /localization_and_confidence="Cytoplasmic, Class 2 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="probable transcriptional regulator" FT /translation="MLIANGLRKVDMQDLLVFLQVHQRQNLVEVAEHLNLSPSTVSYCL FT KKLRQAFDDELFIATRGGMQPTHKSRAMLPHVEEMLARINACHAAQGSFDPRGEPRTFT FT LCAPEYVELLILPALLRRLAANGPRIGLDIRRLGPELPTEALLDGQVDLVFDFGPEYHR FT PAPELQALALFSDELLCVQDRAQPRHERLELDEFCRRRFVFPTPLDASNANLVDTWLRR FT QGRSREVAARANSYVAALQLLSGSDFVLMLPRRIHALLDDGRHHACLAPPGLPPFALHL FT SWSRAAEQDPANLWLREQVLIVCAELGLL*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_process: positive regulation of transcription, FT DNA-dependent [goid GO:0045893] [evidence IEA]; FT " FT gene complement(307878..309092) FT /locus_tag="PA0273" FT CDS complement(307878..309092) FT /function="Membrane proteins; Transport of small FT molecules" FT /product_synonym="probable MFS transporter" FT /protein_id="NP_248964" FT /db_xref="GI:15595470" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="probable major facilitator superfamily (MFS) FT transporter" FT /translation="MPTANPPGRTLWLMAAIVLVGLNLRLSMAAVGPLLNAMRGEIALS FT FGDVSLLTALPMLTLGLGMFFGLGIARRVGEWRSVALALLLIGAASALRLGSRGLPDLL FT GSAMLAGLGIALIQALMPALIKARFGARTPLCMGLYVTAIMAGAALSASAAPTLAEHAG FT WRLGLGAWAALAALALLAWWLQPGTRLRLPDAQPGRSLLRYPRTWLLVLFFGLGTACYT FT CVLAWLAPYYLEQGWSAQESGLLLGFLTAMEVLSGLLAPALASRSRDRRPVLVGLTALM FT LAGFLGLAWAPASLPLLWALCLGLGIGGLFPMGLIVCLDHFDAPQRAGQLAALVQGAGY FT LIAGVSPWIAGLLRDSLGSFTGAWLGLATVAALLLGLGLRFDPRRYAALFAERQARGVG FT AESLR*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene complement(309255..310025) FT /locus_tag="PA0274" FT CDS complement(309255..310025) FT /db_xref="GI:15595471" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248965" FT /localization_and_confidence="Outer Membrane, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="MLRPALPAVLCLYCLLLALPARAALDDQQRALQQLQVQACRAVGS FT LLLLRGEGFQEQHAAQLEKDLASLDRALAAAPEGVLLRQGEKTLVARIREGAAYGPREE FT DLPWRYPQQLSRALRDFLNLVERQVPPPPPGQPLPLWQLPVRVEYLSLQYLARAYLGGL FT ETAREQPRDYLGQDESVLVPLIDRRIALLVAQSANPAGLKKLENRWEYLSQALRDLNSK FT SSALVSASGRPWAPIIVDRHARALSESLMRLSAE*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(310134..310820) FT /locus_tag="PA0275" FT CDS complement(310134..310820) FT /db_xref="GI:15595472" FT /function="Transcriptional regulators" FT /protein_id="NP_248966" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable transcriptional regulator" FT /translation="MNERTDYRSQLQAGRWFQGLPEALQTHLLALAQPRQLPPGQRLFA FT RGDAPCGLYCVVEGAIRISAVSENGKEALLILVEAPHWFGEIALFDGQARTHDAYAEGH FT TQLLQVPQAALLELLRREPHYWRDVALLMSHKLRLAFIALEEMALLPAAQRLARRLLML FT AEGYDNSRSRQVLHLPQEQLALMLSLSRQTTNQILKDLEAQGILQLSYGGIEILDLAGL FT RAATHG*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_process: regulation of nitrogen utilization FT [goid GO:0006808] [evidence IEA]; FT " FT gene 310896..311411 FT /locus_tag="PA0276" FT CDS 310896..311411 FT /db_xref="GI:15595473" FT /function="Membrane proteins" FT /protein_id="NP_248967" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="hypothetical protein" FT /translation="MKTLVDHLAQYAAYHRDRRNIFSHFIGIPMIVLSIAVLLARPALG FT FGLSPALLLALAAALFYLRLDLRFGVAMTALLALTVWGAAQLAAGTTAAWLGWGVGLFV FT VGWIIQFVGHYYEGRKPAFVDDLSGLIVGPLFVLAELAFLLGLRGDVQREVEERAGPTC FT IREHKRAA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(311451..312209) FT /locus_tag="PA0277" FT CDS complement(311451..312209) FT /db_xref="GI:15595474" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248968" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Outer Membrane Vesicle, Class 1 (secondary); FT Unknown, Class 3 (primary)" FT /product="conserved hypothetical protein" FT /translation="MKIRLSLSALALACATLAGCQNLPQGDLMQHGMMAVKAATLSDAE FT VRQVADQACAESDQQNRIAPANSKYGQRLDKIAKALGDQIDGVPVNYKVYLTEEVNAWA FT MANGCIRVYSGLMELMSDNEIEGVLGHEMGHVALGHTRKAAQTAYAAAAVRGAAGASKS FT GALAALSGSQLGELTESLVNAQFSQSQESDADDFSYELLKKRGVNTQGLVTAFEKLAKL FT GGGDSSMFDSHPGSQARADHIRQRIAADRK*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(312381..313133) FT /locus_tag="PA0278" FT CDS complement(312381..313133) FT /db_xref="GI:15595475" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248969" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="hypothetical protein" FT /translation="MSVDLHALIPLIALTFLLAGFVKGVVGLGLPTVSVGLLGLAMPPM FT QAAALLIVPSMVTNLWQLACGPRFLGLMKRLAGLLLGVVVGTLLVGAWLGGDAPRQATG FT VLGLALVAYALLGLAAIPLHLPARHEPWAGPLVGLATGALTAVTGVFVIPAVPYLGALG FT LQRDELVQALGLSFSASTLALAVTLGVHGDLLEPQMLGASLLTLVPALGGMLLGQWLRQ FT RISATLFRRCFFVGLLLLGADLAWRGFH*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 313227..313925 FT /locus_tag="PA0279" FT /gene_synonym="ydfF" FT CDS 313227..313925 FT /db_xref="GI:15595476" FT /function="Transcriptional regulators" FT /protein_id="NP_248970" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="probable transcriptional regulator" FT /translation="MQFNPGFSSLAALLADPGRAQMIWALMDGSARPASELALLAGVSP FT SSASGHLGRLVEGGVLSLEARGRNRFYRLAGPEVGQAVEALASASLALQPQRRSLPPSH FT GTPSALREARTCYDHLAGELAVGVFARMLDAGWIEQEGRTLRLSATGEAGLAGLGIDLA FT EVRRRRRQFACACPDWSERKPHLGGALGAALLEACLRQGWLRPQDGSRALQVSSKGRAG FT LRGLAERTAG*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene complement(313938..314927) FT /locus_tag="PA0280" FT /name="cysA" FT CDS complement(313938..314927) FT /db_xref="GI:15595477" FT /function="Transport of small molecules" FT /protein_id="NP_248971" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 2 (primary); Cytoplasmic Membrane, Class 3 (primary)" FT /product="sulfate transport protein CysA" FT /translation="MSIEIRNVSKNFNAFKALDDINLDIQSGELVALLGPSGCGKTTLL FT RIIAGLETPDAGNIVFHGEDVSQHDVRDRNVGFVFQHYALFRHMTVFDNVAFGLRMKPK FT GERPGESAIKAKVHELLNMVQLDWLADRYPEQLSGGQRQRIALARALAVEPKILLLDEP FT FGALDAKVRKELRRWLARLHEEINLTSVFVTHDQEEAMEVADRIVVMNKGVIEQIGSPG FT EVYENPASDFVYHFLGDSNRLQLGNDQHLLFRPHEVSLSRSAVAEHRAAEVRDIRPLGA FT ITRVTLKVDGQDELIEAEVVKDHDSLAGLARGETLYFKPKAFQPVANL*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: transport [goid GO:0006810] [evidence FT ISS]; FT GO_component: ATP-binding cassette (ABC) transporter FT complex, substrate-binding subunit-containing [goid FT GO:0055052] [evidence IEA]; FT " FT gene complement(314931..315800) FT /locus_tag="PA0281" FT /name="cysW" FT CDS complement(314931..315800) FT /db_xref="GI:15595478" FT /function="Membrane proteins; Transport of small FT molecules" FT /protein_id="NP_248972" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="sulfate transport protein CysW" FT /translation="MSSASISAATASASRRGNAGGRLALIVLAWLVFALFLLLPLYVVL FT SEALKQGFGTFFEAILEPDALAALKLTLIAVAISVPLNLLFGVAAAWCVSKFEFRGKSI FT LVTLIDLPFSVSPVIAGLIYVLLFGAQGYFGEWLSDHDIQIVFAVPGIVLATLFVTVPF FT VARELIPLMQEQGTQEEEAARLLGANGWQMFWHVTLPNIKWGLIYGVVLCTARAMGEFG FT AVSVVSGHIRGVTNTLPLHVEILYNEYNHVAAFSVASLLLLMALVILLLKQWSESRMSR FT LKSNADEE*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_component: membrane [goid GO:0016020] [evidence FT ISS]; FT GO_process: transport [goid GO:0006810] [evidence ISS]; FT GO_component: ATP-binding cassette (ABC) transporter FT complex, substrate-binding subunit-containing [goid FT GO:0055052] [evidence IEA]; FT " FT gene complement(315811..316629) FT /locus_tag="PA0282" FT /name="cysT" FT CDS complement(315811..316629) FT /db_xref="GI:15595479" FT /function="Membrane proteins; Transport of small FT molecules" FT /protein_id="NP_248973" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="sulfate transport protein CysT" FT /translation="MSRRISPVIPGFGLTLGYTLVYLSLLVLIPLGAMFLKTTQLSWEQ FT FWAIISAPRVLAALKLSFGTALAAAVLNGLIGTLLAWVLVRYEFPGRKIIDAMIDLPFA FT LPTAVAGIALTALYAPAGLVGQFASDLGFKIAYTPLGITLALTFVTLPFVVRTVQPVLA FT DIPKEVEEAAACLGARPLQVFRHILVPALLPAWLTGFALAFARGVGEYGSVIFIAGNMP FT MKTEILPLLIMVKLDQYDYTGATAIGVLMLVVSFILLLLINLLQRRIETP*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_component: membrane [goid GO:0016020] [evidence FT ISS]; FT GO_process: transport [goid GO:0006810] [evidence ISS]; FT GO_component: ATP-binding cassette (ABC) transporter FT complex, substrate-binding subunit-containing [goid FT GO:0055052] [evidence IEA]; FT " FT gene complement(316791..317789) FT /locus_tag="PA0283" FT /name="sbp" FT CDS complement(316791..317789) FT /function="Transport of small molecules" FT /product_synonym="sulfate starvation-induced protein 2" FT /protein_id="NP_248974" FT /note="GO_process: transport [goid GO:0006810] [evidence FT ISS]; FT GO_component: ATP-binding cassette (ABC) transporter FT complex, substrate-binding subunit-containing [goid FT GO:0055052] [evidence IEA]; FT " FT /db_xref="GI:15595480" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Periplasmic, Class 2 (primary); Periplasmic, FT Class 3 (primary)" FT /product="sulfate-binding protein precursor" FT /translation="MSLRRFALAALASALVSGPVAAATQLLNVSYDPTRELYQAYNAAF FT IKHWKAQGGEDLTVQQSHGGSGKQARAVIDGLKADVVTLALAGDIDELHKLGKLLPADW FT QARLPDNSTPYTSTIVFLVRKGNPKGIKDWGDLTKEGVEVITPNPKTSGGARWNFLAAW FT AWAKKQYGSDEKAKDYVQALYKHVPVLDTGARGSTITFVNNQIGDVLLAWENEAFLAKK FT EQGGENFEIVVPSISILAEPPVAVVDKVVEKKGTRKVAEAYLQYLYSEEGQRIAAQNFY FT RPRNQKVAAEFATQFPKLNLVTVDSDFGGWKTAQPKFFNDGGIFDQIYQAQ*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene complement(317966..318148) FT /locus_tag="PA0284" FT CDS complement(317966..318148) FT /db_xref="GI:15595481" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248975" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MSATLRSLDGQDEATILREIQSALRGLRFGAVEITVHNGQVVQIE FT RKEKFRLQQPAVKQA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(318312..320594) FT /locus_tag="PA0285" FT CDS complement(318312..320594) FT /db_xref="GI:15595482" FT /function="Membrane proteins" FT /protein_id="NP_248976" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="conserved hypothetical protein" FT /translation="MSPRLSALRLSLAYLAIAIAWAFLSDHLLQNQVQDHDQLVFWMTA FT KRLFFFAATGLLLYLYLVRQFRRKAQAYDELHGSEQRLNRALEAVRDGLWDWDLVTDRM FT FVSPGYAALIGLAPEELGDPIETWKKRLHPEEYATVLEAHRNHLQGLTDNLDHIYRLRH FT KDGDYRWIHSRGRVLRDALGKPLHYTGVARDITLQRLKEDHLRQAAAVFDSTREGVLVT FT DAQAVIVHVNPSFERITGYRSEDVLGKTPAILRSGRQDQAFYQRLWLALREQDVWSGEI FT WNRRKSGEIYPQWLHIRAVRNDQGQLTHYVGVFSDLSSIKRSENELDFLAHHDSLTGLP FT NRVLLRERIEQALENGKDRTVAGALLLIDLDHFKHINDSLGHTTGDMLLKEVSKRLQHQ FT LDERCLLSRLGGDEFAILVENDDPEAVARLSQRILDGFNAPFDIHCQPIYISASLGVSL FT YPEDASDVDHLMQHADAALFQAKDSGRNAYAFYTRVLTARARAHVQVESALRHALEHDE FT LRVHYQPVHDLASGRIVGVESLVRWQHPERGLVPPGEFVPVAEECGLIAALDNWVLKRA FT CRQMREWQQRGVELEFVAVNVSSRLFNRGGLEERIANALEESGLEPRYLELEVTESAVM FT EDFEQSLNLLCRLRILGVNLAIDDFGTGYSSLMRLKRLPVHKLKIDQGFVAGLPGAVDD FT AAIARAIVALAQSMGLRVVAEGIEHQDQALFLREHGCDFGQGYWYGRPQPAEALRFDLP FT PVALPED*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_function: cyclase activity [goid GO:0009975] FT [evidence IEA]; FT " FT gene 320766..321944 FT /locus_tag="PA0286" FT /gene_synonym="desA " FT /name="desA" FT CDS 320766..321944 FT /function="Fatty acid and phospholipid metabolism" FT /product_synonym="delta-9 fatty acid desaturase, DesA " FT /protein_id="NP_248977" FT /db_xref="GI:15595483" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="delta-9 fatty acid desaturase, DesA" FT /translation="MWFNGFLDLSPWQLVAVTLVLTHITIVSVTVYLHRYSAHRALDLH FT PALQHFFRFWLWLTTGMNTREWTAIHRKHHAKCETVEDPHSPVHKGLFTVLRAGAELYK FT AEAKNQDTLRIYGKNCPDDWIERNLYSRFPIGGVVLMALIDLALFGALGLTVWAVQMVW FT IPFWAAGVVNGLGHAVGYRNFECRDAATNLVPWGILIGGEELHNNHHTYPNSAKLSVKK FT WEFDLGWAWIKLFSFLRLARVARVAPIAHRVEGKHSLDMDTAMAILNNRFQIMAQYRKL FT VIAPLVKQEVAKADESVRHLFRRAKRLLSRETSLLQDRHHVRIDSMLAHSQALKVIYEK FT RLALQQIWAKTSANGHDMLAAIKDWVHEAEASGIQSLKEFAAQLKTYSLRPA*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT gene 322175..323560 FT /locus_tag="PA0287" FT /gene_synonym="speB1" FT /name="gpuP" FT CDS 322175..323560 FT /db_xref="GI:15595484" FT /function="Transport of small molecules" FT /protein_id="NP_248978" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 2 (primary); Cytoplasmic Membrane, Class 3 (primary)" FT /product="3-guanidinopropionate transport protein" FT /translation="MLLDYLIMLVYALAMLGLGWYGMRKAKSQSDFLVAGRRLGPGLYL FT GTMAAVVLGGASTIGTVKLGYQFGLSGLWLVFMLGLGIIVLSLVFSRQIARLRVFTVTQ FT VLEQRYQASSRLIGGVVMVAYDLMVAVTATIAIGSVTEVVFGIPRIPAILCGGGIVIVY FT SVIGGMWSLTLTDIIQFVIKTVGIFLVLLPLSIDGAGGLARMQEVLPAGFFDLGHIGLD FT TILTYFLLYFFGALIGQDIWQRVFTARSETVVRYAGLGAGVYCMLYGAACALIGAAARV FT LLPDLAVPENAYAEITREVLAPGLRGLVVAAALSAIMSTASGCLLAAATVLQEDIYARF FT LRPGTTSDIRLSRCITLLMGVAMLVLACLVNDVIAALSIAYNLLVGGLLVPIVGALLWR FT RASPQGAIASIVAGCLAVIACMARDGLLANSPIVYGLLASLATFVAVSLATRPAASLRA FT QPE*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT /note="GO_function: solute:sodium symporter activity [goid FT GO:0015370] [evidence IEA]; FT " FT gene 323616..324572 FT /locus_tag="PA0288" FT /name="gpuA" FT CDS 323616..324572 FT /function="Amino acid biosynthesis and metabolism" FT /product_synonym="proclavaminic acid amidino hydrolase, FT PAH; proclavaminate amidino hydrolase; AUH; agmatine FT ureohydrolase" FT /protein_id="NP_248979" FT /note="GO_process: amino acid metabolic process [goid FT GO:0006520] [evidence ISS]; FT GO_function: agmatinase activity [goid GO:0008783] FT [evidence IEA]; FT " FT /db_xref="GI:15595485" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="3-guanidinopropionase" FT /translation="MSNDHPQPLDAAEIPRFAGIPTFMRLPAFTDPAALQVGLIGVPWD FT GGTTNRAGARHGPREVRNLSSLMRKVHHVSRIAPYDLVRVGDLGDAPVNPIDLLDSLRR FT IEGFYRQVHAAGTLPLSVGGDHLVTLPIFRALGRERPLGMVHFDAHSDTNDRYFGDNPY FT THGTPFRRAIEEGLLDPLRTVQIGIRGSVYSPDDDAFARECGIRVIHMEEFVELGVEAT FT LAEARRVVGAGPTYVSFDVDVLDPAFAPGTGTPEIGGMTSLQAQQLVRGLRGLDLVGAD FT VVEVSPPFDVGGATALVGATMMFELLCLLAESAARSA*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT gene 324625..325587 FT /locus_tag="PA0289" FT /name="gpuR" FT CDS 324625..325587 FT /db_xref="GI:15595486" FT /function="Transcriptional regulators" FT /protein_id="NP_248980" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="transcriptional activator GpuR" FT /translation="MGAGMLGNINDIDLRMLRTFCAIVEAGGFTAAQARLNTSLSRLSV FT LVRDLEVRLGYSLCRRGNGGFQLTEEGQELYDAALGLFSDIARFREQVRGLGGRDREAL FT HLGCVDGVIGQHCLPLPLAIRLFRQRAPEVLLKLHTRRPDELEHAVLEERLQLAVGAFH FT HRLSGLYYQPLFREEQNLYCGSAHPFFARADDEPTLGEICAADYVGRGYMAENHRPHDL FT RFNQGTDAYTMEAIATLVFSGTYIGYLPTHYAATWVAEGRMRAIRPRQLAYDSEFHCIT FT RQGHEERPTLTLFLRSLFEAQKQLGVQVPANTNGIARQL*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT /note="GO_process: positive regulation of transcription, FT DNA-dependent [goid GO:0045893] [evidence IEA]; FT " FT gene 325700..326671 FT /locus_tag="PA0290" FT CDS 325700..326671 FT /db_xref="GI:15595487" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248981" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="hypothetical protein" FT /translation="MDDLTGIPEDPQEAALALLHSRAEVARLKEREQLFSALLASVNSV FT LWAYDWQNRRMVYVSPAYEKIFGRSAALLLADYEEWRNSIYPDDLDYADSSLLQVLERG FT AVEQREYRIVRGDGEVRWLNDKCFVSRQGEAGLPLMVVGIAEDITDKKHMESELQRLAT FT TDVLTQSSNRRYFFDSAEAAFKECRREGIPLAFLLLDVDDFKKINDRFGHQVGDQVLQR FT IAQSGSAALRRGDLFGRIGGEEFAVLLPGCDEQTARQIGERLQREVQRLRFQEGEHSFG FT ITVSQGLTVLQADDEGLGALYSRADAAMYSAKRQGKDCIVVG*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_function: cyclase activity [goid GO:0009975] FT [evidence IEA]; FT " FT gene 327284..328666 FT /locus_tag="PA0291" FT /name="oprE" FT CDS 327284..328666 FT /function="Membrane proteins; Transport of small FT molecules" FT /product_synonym="Porin E1" FT /protein_id="NP_248982" FT /note="GO_component: membrane [goid GO:0016020] [evidence FT IDA]; FT GO_process: transport [goid GO:0006810] [evidence IDA]; FT " FT /db_xref="GI:15595488" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Outer Membrane, Class 1 (primary); Outer FT Membrane Vesicle, Class 1 (secondary); Outer Membrane, FT Class 3 (primary)" FT /product="Anaerobically-induced outer membrane porin OprE FT precursor" FT /translation="MKSRKINKSRLALAITAGTLGALAQQAVAAGFIEDSKASLTLRNF FT YINTDNRNGTASPSKQEEWGQGFILNYQSGFTQGTVGFGVDALGLLGVRLDGGGRAGKS FT GLDRQPGTVFPLESNGEPVHDFASLGLTAKAKVSNTEFRYGTLQPKLPVVTYNDGRLLP FT VTFEGGQVTSTDLKDFTLVAGQLEHSKGRNSTDNRSLSIAGANGSSASSRDSNKFYYAG FT GDYKVNKDLTLQYYYGNLDDFYKQHFLGLIHNWQIGPGVLKTDLRAFDSSSDGKNGSRS FT GRADGYVSSGYYGSGVTKGEVDNRAFSGLFTYTVSGHSIGAGYQILNGDSDFPFLNRGD FT GEGSTAYLITDVQIGKFQRAGERTWQVRYGYDFATVGVPGLTFNTIYLSGDKIKTARGD FT QSEWERDISLAYVIPDGTFKGLGFTWKNASFRSGLPAAGSSNNQRDQDENRLIVSYTLP FT LL*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT gene complement(328801..329907) FT /locus_tag="PA0292" FT /name="aguA" FT CDS complement(328801..329907) FT /function="Amino acid biosynthesis and metabolism" FT /product_synonym="agmatine iminohydrolase" FT /protein_id="NP_248983" FT /note="GO_process: amino acid metabolic process [goid FT GO:0006520] [evidence IDA]; FT GO_process: biological_process [goid GO:0008150] [evidence FT RCA]; FT GO_function: molecular_function [goid GO:0003674] FT [evidence RCA]; FT GO_function: agmatine deiminase activity [goid GO:0047632] FT [evidence IEA]; FT " FT /db_xref="GI:15595489" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="agmatine deiminase" FT /translation="MSNPTSTPRADGFRMPAEWEPHEQTWMVWPERPDNWRNGGKPAQA FT AFAAVAKAIARFEPVTVCASAGQYENARARLDDGNIRVVEISSDDAWVRDTGPTFVIDD FT KGDVRGVDWGFNAWGGFEGGLYFPWQRDDQVARKILEIERRARYRTDDFVLEGGSIHVD FT GEGTLITTEECLLNHNRNPHLSQAEIERTLRDYLAVESIIWLPNGLYNDETDGHVDNFC FT CYARPGEVLLAWTDDQDDPNYLRCQAALRVLEESRDAKGRKLVVHKMPIPGPLYATQEE FT CDGVDIVEGSQPRDPSIRLAGSYVNFLIVNGGIIAPSFDDPKDAEARAILQRVFPEHEV FT VMVPGREILLGGGNIHCITQQQPAPRKA*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT gene complement(329993..330871) FT /locus_tag="PA0293" FT /name="aguB" FT CDS complement(329993..330871) FT /function="Amino acid biosynthesis and metabolism; FT Putative enzymes" FT /product_synonym="N-carbamoylputrescine amidase" FT /protein_id="NP_248984" FT /note="GO_process: amino acid metabolic process [goid FT GO:0006520] [evidence IDA]; FT GO_function: catalytic activity [goid GO:0003824] FT [evidence IDA]; FT GO_process: arginine metabolic process [goid GO:0006525] FT [evidence IDA]; FT GO_process: proline metabolic process [goid GO:0006560] FT [evidence IDA]; FT GO_function: N-carbamoylputrescine amidase activity [goid FT GO:0050126] [evidence IEA]; FT " FT /db_xref="GI:15595490" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="N-carbamoylputrescine amidohydrolase" FT /translation="MTRNVTVAATQMACSWDRPANIARAEKLVRQAAARGAQIILIQEL FT FETPYFCQKPNPDYLQLATTVEENAAIAHFQALARELQVVLPISFFERAGRARFNSIAV FT IDADGGNLGVYRKSHIPDGPGYHEKYYFNPGDTGFKVWQTRYARIGVGICWDQWFPESA FT RSMALLGAELLFYPTAIGSEPHDASISSRDHWQRVQQGHAGANLMPLVASNRIGREEQD FT GYDITFYGSSFIADPFGEKVEELNRTEEGILVHTFDLDALERTRSAWGVFRDRRPNLYG FT PLKTLDGSLES*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT gene complement(331034..331699) FT /locus_tag="PA0294" FT /name="aguR" FT CDS complement(331034..331699) FT /db_xref="GI:15595491" FT /function="Transcriptional regulators" FT /protein_id="NP_248985" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="transcriptional regulator AguR" FT /translation="MQPTSPTRKPRASSQARIAAILDAARGLLADEGIGGLSIYSVAER FT AEMPPSSVYHFFPSVPALLQGLTGEVHAAFRACLEQPVDHAGLRCWRDLSRIVEERMLA FT VYARDAAARQLILASHGLAEVTQADRQHDVQLGQAMRALFERHFLLPPLPTDIEIFSLA FT MELGDRVYALSVQRHGIIDARLAEEGMRVFDAYLGLYLPPILEKRSEPLSGFISDLNR* FT " FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT /note="GO_process: regulation of transcription, DNA- FT dependent [goid GO:0006355] [evidence IDA]; FT GO_function: transcription regulator activity [goid FT GO:0030528] [evidence IDA]; FT GO_process: arginine metabolic process [goid GO:0006525] FT [evidence IDA]; FT GO_process: proline metabolic process [goid GO:0006560] FT [evidence IDA]; FT " FT gene complement(331762..332823) FT /locus_tag="PA0295" FT CDS complement(331762..332823) FT /db_xref="GI:15595492" FT /function="Transport of small molecules" FT /protein_id="NP_248986" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Periplasmic, Class 2 (primary); Periplasmic, FT Class 3 (primary)" FT /product="probable periplasmic polyamine binding protein" FT /translation="MPRLSALLFLALAPWLAQAEETLRVYNWNDYIDPQVLESFQKDTG FT IRVEYHTFATAEELDKALRSGEAIDVAVPSHDTLPALLKDNLLRPLDFTQLPNRSHLDR FT QLLSKLAAVDPDNRHAVPYLWGAVGLAINTPQAEAAYGGPLPNSWSLLFDASQSQRLKS FT CGISLLDAPDETLAILLNYQGRNLGRTAPSQVRRAAEALHGLRPNLRYVDSERYIADLE FT GGRLCLAMAWVGDALRAAKAGQPVSFEVPQEGSVLFIDNLVIPAGAQHPREAHRFIDYL FT MQPKIAAQITAATLYPSGNADAAGFLDPALRQQPGLYPDRDTSRRLFALETPPEKLRPV FT VDEIWKAFRGASH*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene complement(333079..334455) FT /locus_tag="PA0296" FT /name="spuI" FT CDS complement(333079..334455) FT /function="Putative enzymes; Carbon compound catabolism" FT /product_synonym="pauA1" FT /protein_id="NP_248987" FT /note="GO_process: glutamine biosynthetic process [goid FT GO:0006542] [evidence IEA]; FT GO_process: polyamine catabolic process [goid GO:0006598] FT [evidence IDA]; FT " FT /db_xref="GI:15595493" FT /localization_and_confidence="Cytoplasmic, Class 1 FT (primary); Cytoplasmic, Class 2 (primary); Cytoplasmic, FT Class 3 (primary)" FT /product="Glutamylpolyamine synthetase" FT /translation="MSVPQRAVQLTEPSEFLKEHPEVQFVDLLIADMNGVVRGKRIERN FT SLNKVFEKGINLPASLFALDITGSTVESTGLGLDIGDADRICYPIPGTLSMEPWQKRPT FT AQLLMTMHELEGEPFFADPREVLRQVVARFTEMELTIVAAFELEFYLIDQENVNGRPQP FT PRSPISGKRPQSVQVYSIDDLDEYVECLQDIIDGARAQGIPADAIVAESAPAQFEVNLN FT HVNDALKACDHAVLLKRLVKNIAYDHEMDTTFMAKPYPGQAGNGLHVHISLLDKHGNNI FT FTSEDPEQNAALRHAIGGVLETLPASMAFLCPNVNSYRRFGSQFYVPNAPSWGLDNRTV FT ALRVPTGSPDAVRLEHRVAGADANPYLLLAAVLAGVHHGLTNKVEPGAPIEGNSYEQME FT PSLPNNLRDALRELDESEIMAKYIDPKYIDIFVACKESELEEFEHSISDLEYNWYLHTV FT *" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT gene 334734..335486 FT /locus_tag="PA0297" FT /gene_synonym="ycjL" FT /name="spuA" FT CDS 334734..335486 FT /function="Amino acid biosynthesis and metabolism; Carbon FT compound catabolism" FT /product_synonym="pauD1" FT /protein_id="NP_248988" FT /note="GO_process: amino acid metabolic process [goid FT GO:0006520] [evidence IDA]; FT GO_process: GMP biosynthetic process [goid GO:0006177] FT [evidence IEA]; FT GO_process: polyamine catabolic process [goid GO:0006598] FT [evidence ISS]; FT " FT /db_xref="GI:15595494" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="probable glutamine amidotransferase" FT /translation="MSRLPLIGVTACTKQIGLHPYHIAGDKYLRAVVNGAGGLPLIIPA FT LGESIDQAALLDSVDGLLFTGSPSNVEPRHYSGPASEPGTLHDSDRDATTLPLVRAAID FT AGIPVLGICRGFQEMNVAFGGSLHQKVHEVGTFMDHREPADQPLEVQYAPRHAMHVQPG FT GVLAGIGLPSEFQVNSIHGQGVDRLAPGLRVEALAPDGLVEAISVEGAKAFALGVQWHP FT EWQVLTNPNYLAIFQAFGKACSKRAGQR*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene 335527..336885 FT /locus_tag="PA0298" FT /name="spuB" FT CDS 335527..336885 FT /function="Putative enzymes; Carbon compound catabolism" FT /product_synonym="pauA2" FT /protein_id="NP_248989" FT /note="GO_function: catalytic activity [goid GO:0003824] FT [evidence IDA]; FT GO_process: glutamine biosynthetic process [goid FT GO:0006542] [evidence IEA]; FT GO_process: polyamine catabolic process [goid GO:0006598] FT [evidence IDA]; FT " FT /db_xref="GI:15595495" FT /localization_and_confidence="Cytoplasmic, Class 2 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="Glutamylpolyamine synthetase" FT /translation="MTTKLDQLTSWLKERKITEVECLISDLTGIARGKISPTNKFIAEK FT GMRLPESVLLQTVTGDYVEDDIYYDLLDPADIDMVCRPDENAVFLVPWAIEPTAMVIHD FT TFDKLGNPIELSPRNILKRVLKMYADKGWRPIVAPEMEFYLTKRSDDPDYPLQAPVGRS FT GRQETGRQSFSIDAANEFDPLFEDMYDWCEAQGLDLDTLIHEEGTAQMEINFRHGDALD FT LADQILVFKRTMREAALKHNVAATFMAKPMTGEPGSAMHLHQSIVDVKTGKNIFSNADG FT TMSELFLHHIGGLQKFIPEVLPLFAPNVNSFRRFLPDTSAPVNVEWGEENRTVGLRVPD FT SSPENRRVENRLAGADANPYLALAASLLCGYIGMVEGIKPSAQVKGRGYERRNLRLPLT FT IEAALERMENCKPLEQYLGSKFISGYVAVKRAEHENFKRVISSWEREFLLLSV*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT gene 336951..338321 FT /locus_tag="PA0299" FT /name="spuC" FT CDS 336951..338321 FT /function="Putative enzymes; Carbon compound catabolism" FT /product_synonym="spuC" FT /protein_id="NP_248990" FT /note="GO_function: catalytic activity [goid GO:0003824] FT [evidence ISS]; FT GO_process: polyamine catabolic process [goid GO:0006598] FT [evidence ISS]; FT " FT /db_xref="GI:15595496" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="Polyamine:pyruvate transaminase" FT /translation="MNSQITNAKTREWQALSRDHHLPPFTDYKQLNEKGARIITKAEGV FT YIWDSEGNKILDAMAGLWCVNVGYGREELVQAATRQMRELPFYNLFFQTAHPPVVELAK FT AIADVAPEGMNHVFFTGSGSEANDTVLRMVRHYWATKGQPQKKVVIGRWNGYHGSTVAG FT VSLGGMKALHEQGDFPIPGIVHIAQPYWYGEGGDMSPDEFGVWAAEQLEKKILEVGEEN FT VAAFIAEPIQGAGGVIVPPDTYWPKIREILAKYDILFIADEVICGFGRTGEWFGSQYYG FT NAPDLMPIAKGLTSGYIPMGGVVVRDEIVEVLNQGGEFYHGFTYSGHPVAAAVALENIR FT ILREEKIIEKVKAETAPYLQKRWQELADHPLVGEARGVGMVAALELVKNKKTRERFTDK FT GVGMLCREHCFRNGLIMRAVGDTMIISPPLVIDPSQIDELITLARKCLDQTAAAVLA*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene 338437..339540 FT /locus_tag="PA0300" FT /gene_synonym="potF2" FT /name="spuD" FT CDS 338437..339540 FT /db_xref="GI:15595497" FT /function="Transport of small molecules" FT /protein_id="NP_248991" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Periplasmic, Class 3 (primary)" FT /product="polyamine transport protein" FT /translation="MMKRFGKTLLALTLAGSVAGMAQAADNKVLHVYNWSDYIAPDTLE FT KFTKETGIKVVYDVYDSNEVLEAKLLAGKSGYDVVVPSNSFLAKQIKAGVYQKLDKSKL FT PNWKNLNKDLMHTLEVSDPGNEHAIPYMWGTIGIGYNPDKVKAAFGDNAPVDSWDLVFK FT PENIQKLKQCGVSFLDSPTEILPAALHYLGYKPDTDNPKELKAAEELFLKIRPYVTYFH FT SSKYISDLANGNICVAIGYSGDIYQAKSRAEEAKNKVTVKYNIPKEGAGSFFDMVAIPK FT DAENTEGALAFVNFLMKPEIMAEITDVVQFPNGNAAATPLVSEAIRNDPGIYPSEEVMK FT KLYTFPDLPAKTQRAMTRSWTKIKSGK*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT /note="GO_process: transport [goid GO:0006810] [evidence FT ISS]; FT GO_component: ATP-binding cassette (ABC) transporter FT complex, substrate-binding subunit-containing [goid FT GO:0055052] [evidence IEA]; FT " FT gene 339959..341056 FT /locus_tag="PA0301" FT /gene_synonym="potF3" FT /name="spuE" FT CDS 339959..341056 FT /db_xref="GI:15595498" FT /function="Transport of small molecules" FT /protein_id="NP_248992" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Periplasmic, Class 3 (primary)" FT /product="polyamine transport protein" FT /translation="MQHSIGKTLLVAALATAIAGPVQAEKKSLHIYNWTDYIAPTTLKD FT FTKESGIDVSYDVFDSNETLEGKLVSGHSGYDIVVPSNNFLGKQIQAGAFQKLDKSKLP FT NWKNLDPALLKQLEVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPE FT NMKKLAKCGVAFMDSGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFHSS FT KYISDLANGNICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADA FT KAADNAYAFIDYLLRPEVIAKVSDYVGYANAIPGARPLMDKSVSDSEEVYPPQAVLDKL FT YVSAVLPAKVLRLQTRTWTRIKTGK*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT /note="GO_process: transport [goid GO:0006810] [evidence FT ISS]; FT " FT gene 341111..342265 FT /locus_tag="PA0302" FT /gene_synonym="potG" FT /name="spuF" FT CDS 341111..342265 FT /db_xref="GI:15595499" FT /function="Transport of small molecules" FT /protein_id="NP_248993" FT /localization_and_confidence="Outer Membrane Vesicle, FT Class 1 (secondary); Cytoplasmic Membrane, Class 3 FT (primary)" FT /product="polyamine transport protein PotG" FT /translation="MAIASGAYKKALEGNQQPKEVLVKIDRVTKQFDETLAVDTVSLTI FT NKGEIFALLGGSGSGKSTLLRMLAGFERPTEGRIFLDGQDITDLPPYERPINMMFQSYA FT LFPHMSVAQNIAFGLKQDGLPKAEIDERVAEMLKLVHMTQYAKRKPHQLSGGQRQRVAL FT ARSLAKRPKLLLLDEPMGALDKKLRSQMQLELVEIIERVGVTCVMVTHDQEEAMTMAQR FT IAIMHLGCIEQIGSPMDIYETPASRLVCEFIGNVNLFDGVLVEDVQDHAVIACPQLENP FT IYIGHGISTRAEDKRITYALRPEKVMISAQKPDNLEHAGHNWAQGTVYDIAYLGGHSVY FT YIKLASGMIVQAFMANAERHVARPTWDQSVYISWYDDSGVVLQS*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT /note="GO_process: transport [goid GO:0006810] [evidence FT ISS]; FT GO_process: putrescine transport [goid GO:0015847] FT [evidence RCA]; FT GO_component: ATP-binding cassette (ABC) transporter FT complex, substrate-binding subunit-containing [goid FT GO:0055052] [evidence IEA]; FT " FT gene 342292..343173 FT /locus_tag="PA0303" FT /gene_synonym="potH" FT /name="spuG" FT CDS 342292..343173 FT /db_xref="GI:15595500" FT /function="Membrane proteins; Transport of small FT molecules" FT /protein_id="NP_248994" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="polyamine transport protein PotH" FT /translation="MPTGRHAVIGVPFLWLFLFFLLPFAIVLKISLAEADVAIPPYTEI FT FAYADQQLQVLLNLGNYLMLTDDPLYIDAYLGSLKMAFISTLICLLVGYPMAYAIARSS FT QSSQTVLLLLIMMPTWTAILIRVYAWMGILSNNGLLNSVLMGLGLISEPLTILNTNIAV FT YIGIVYSYLPFMILPLYANLVKHDPSLLEAASDLGARNFTSFWKITVPLSKNGIIAGCM FT LVFIPAVGEFVIPELLGGPETLMIGKVLWQEFFNNRDWPVASALAVVMLAILIIPIILF FT NKNQAKELEGKV*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT /note="GO_component: membrane [goid GO:0016020] [evidence FT ISS]; FT GO_process: transport [goid GO:0006810] [evidence ISS]; FT GO_component: ATP-binding cassette (ABC) transporter FT complex, substrate-binding subunit-containing [goid FT GO:0055052] [evidence IEA]; FT " FT gene 343256..344125 FT /locus_tag="PA0304" FT /gene_synonym="potI" FT /name="spuH" FT CDS 343256..344125 FT /db_xref="GI:15595501" FT /function="Membrane proteins; Transport of small FT molecules" FT /protein_id="NP_248995" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="polyamine transport protein PotI" FT /translation="MKRWNFSNVMLIVGLLFIYLPMLILVIYSFNASKLVTVWGGWSVK FT WYVGLLDNTQLVSSVGRSLEIAFYTAFSSVFLGTLAAFVLTRIPRFRGRTLFGGMVTAP FT LVMPEVITGLSLLLLFVAMAQLIGWPQERGIVTIWIAHTSFCSSYVAVVVSARLRELDL FT SIEEAAMDLGAKPWKVFLLITIPMIAPSLAAGGMMSFALSLDDLVLASFVSGPGSTTLP FT MEVFSAVRLGVKPEINAVASLILLSVSLFTFFAWYFTRQAEERRRRAIQQAMEETATDW FT QKGSPTPA*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT /note="GO_component: membrane [goid GO:0016020] [evidence FT ISS]; FT GO_process: transport [goid GO:0006810] [evidence ISS]; FT GO_component: ATP-binding cassette (ABC) transporter FT complex, substrate-binding subunit-containing [goid FT GO:0055052] [evidence IEA]; FT " FT CDS complement(344303..346690) FT /db_xref="GI:15595502" FT /function="Carbon compound catabolism" FT /protein_id="NP_248996" FT /localization_and_confidence="Periplasmic, Class 3 FT (primary)" FT /product="acylhomoserine lactone acylase B" FT /translation="MKRTLTVIAVAVAAAAAGGAWYLHAKQPLRNGSLALAHLQAPVDV FT RYDERGVPHLYAQNQTDLYRALGYVHAQDRLFQMEMLRRLARGELAEVLGPKLVDTDRL FT FRTLRIRDHAAEYSARQDKQSQPWKVLEAYLDGVNQFQENNPAPLEFDLLGIPRRPFTP FT EDTLSIAGYMAYSFAAAFRTEPVLTYIRDELGSDYLRIFDLDWHPQGVLTPSGALGAGD FT WKDLGALARLSQQALEDAGLPQFEGSNAWVVAGSRTASGKPLLAGDPHIRFAAPAVWYE FT AQLSAPGFELYGHHQALNPFASLGHNRAFGWSLTMFQNDDLDLVAEKVNPDNPNQVWYQ FT GEWVDLQSEEQEIAVKGAAPVKLTLRRSPHGPIVNDALGASSGKTPIAMWWAFLETENP FT VLDAFYQLNRADTLAKARAAASKIHSPGLNLVWANAAGDIGWWASAALPKRPEGVNPSF FT ILDGSKGEADKSGFYPFADNPQEENPARGYIVSANFQPVPANGRPIPGYYNLADRGQWL FT DTQLADRGTKWNLDNSRALQLGNRTGYAPRLLAPLLPVLREVVDDAEGKRLVEQLAAWN FT GDYPVDSTAATLFNQLLFQIAEGALHDELGDAFFDSLIATRAIDSALPRLAGDADSPWW FT DDRRTERRETRADIVRTAWNASLAHLRGTLGNDPSGWLWGKAHTLTHEHALGQQALLRR FT LLNVGPFAAPGTHEVPNNLSAKIGPAPWAVTYGPSTRRLVDFADPTHSLGINPVGQSGV FT PFDGHYDDQAEAYIEGHYLPQHYEENEVKANSKGVLVLEPKR*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT gene complement(344303..346690) FT /locus_tag="PA0305" FT /name="hacB" FT gene 346801..347853 FT /locus_tag="PA0306" FT CDS 346801..347853 FT /db_xref="GI:15595503" FT /function="Transcriptional regulators" FT /protein_id="NP_248997" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable transcriptional regulator" FT /translation="MQDDPSTSPLTHSATLRRLLYEALDALGLDPTRVYRSVYRRIPLP FT PPTLGGRLVHDNAPLFWTELAAVTGDADIGLHLGEAMKPRLLDVVGYLLLSARDLEEAL FT RSFVRFQHILSGGFAARLEVEGETARLILDINYLGYASLRQQIECLMLLFLKLLALISD FT DEFVAERIEFRHRAPPRLGEHRRLFGRLPLFSRPHDALVFSAALLRRPSRNANPDMHDV FT LTRHAEEQSRELSENRLLNRVRYLIELRLGEGYGLRQCAAELGLGSGALQRALAAGGAS FT FRQVRDEVRRQRASEMLLAGRAIREVAKACGFAELSPFYRAFRRWHAAPPEQYRARLAK FT REEGYSTSGT*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene complement(348440..349051) FT /locus_tag="PA0307" FT CDS complement(348440..349051) FT /db_xref="GI:15595504" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248998" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MASLAPVFRVNAMTPRRKTLLVSLVGLLWAGGLLAAYWWFEIRYI FT RPFSEQTTLFSGDSLRLPAELAGPGAIRLVHFWDPACPCNVGNQQHLGELIERFAGKGV FT EFHVLQKPGSQGRLPDNLAALRALAGLPGSEQLPASPAVAIWDRDGRLAYFGPYSEGAV FT CTSSNSFIEPILEALLQGRPVDATHTLAVGCYCPWTPEKG*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 349050..350069 FT /locus_tag="PA0308" FT CDS 349050..350069 FT /db_xref="GI:15595505" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_248999" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="MCSRAAEYPWVSPVARPRIDCSPEPPMSEAFNPDYLRQHLRPLAA FT AEADAAVLAYQAYYGLDLRSRHPRLQARLGSMAVDGRRLAVQAWLLPEARGSLLLMHGY FT YDHMGLYRHVVDWALGMGFSVLACDLPGHGLSEGERASIRDFAEYQAVFKGLLGQAAEL FT DLAAPWHLCGQSTGGAILLDYLLHGGERPELGETILLAPLVRPRAWGWSKLSYRLLSPF FT VDSIPRRFSENSSDPQFLDFLREHDPLQPRTLPTAWVGALTRWVPRIERAPRRALSPLV FT VQGESDETVDWRHGLKVLREKFDEPRILLLEEARHHLANESEGLRRRYFDFLSDALGA* FT " FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_process: photosynthesis [goid GO:0015979] FT [evidence IEA]; FT " FT gene complement(350089..350841) FT /locus_tag="PA0309" FT CDS complement(350089..350841) FT /db_xref="GI:15595506" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249000" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MRALLAFALLLVGLPALADPYQRLYQAAGWPDQRAHFSDALDAAQ FT KRYQDKLPPALYQTLVDNSNRRFAPAEVDQRALNGLRENLPDSASPLNFFESPLGRKVV FT AAEVLATRRDQLLQHSNGLPRQTASEPRRALVKRLAQVLPAREAGAEVSLALAGVAADS FT LSQMLPGLPGLLGGGQTGQLLEGQRQRLVQQIGADLENTLLYVYRDLSDAELTQYVNFA FT ESPAGRSYYQAALAALKAGLAVDQAVAP*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 350890..351588 FT /locus_tag="PA0310" FT CDS 350890..351588 FT /db_xref="GI:15595507" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249001" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="MGRYCRHAADRLSRHRGGTLQWTMHINVNHPLLHRIVDELVDQGW FT SHQSIFMPERLTTRLAEECRTRAVAGDLTPAAIGRGDGQVIREGIRGDLTQWLEPGESE FT ACDEYLGVMDSLRQALNASLFLGLEDFECHFALYPPGAYYQKHVDRFRDDDARTVSAVL FT YLNDAWLPEHGGALRLHLPQRQVDIQPTGGSLVVFMSAGTEHEVLPASRDRLSLTGWFR FT RRNESLLQLS*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(351610..352164) FT /locus_tag="PA0311" FT CDS complement(351610..352164) FT /db_xref="GI:15595508" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249002" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MLPTRSLLPFFLAPALLASAASQAAMEALDNDSLSQVTGQAGISL FT RLDLRAGAARVAWVDDGGSLSLRNLVIDNGCVKAGDCPDGRGGNIPLGAAQLGLSLPIF FT GVEQPTLALDVTTGSGGGQQLAISLPDLATINDQLIASGLPAQRIRLRVASDLYIGDNS FT IGRIELRDITDLRGTIKVWGH*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 352430..352924 FT /locus_tag="PA0312" FT CDS 352430..352924 FT /db_xref="GI:15595509" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249003" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="conserved hypothetical protein" FT /translation="MQKVLVSRCLLGHLVRYDGGSHGPFDLLSRWHAQGRIVALCPEVA FT GGLPTPRPPAEIPGGQGGEVLDRLNRVFTVDGEDVSEAFLLGAEAAVELVRRHDIRMAV FT LKARSPSCGNLENYDGRFNGNRVAGEGVTAAALKRMGVLVFNEDELDRAAVCLAGLDAG FT G*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(352927..353619) FT /locus_tag="PA0313" FT /gene_synonym="yecS" FT CDS complement(352927..353619) FT /db_xref="GI:15595510" FT /function="Membrane proteins; Transport of small FT molecules" FT /protein_id="NP_249004" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 2 (primary); Cytoplasmic Membrane, Class 3 (primary)" FT /product="L-cysteine transporter of ABC system YecS" FT /translation="MNSLQKLLEWLANLVELLGMAWPFLLQGAMYTVLFAAVSMVLGLI FT LGFSVAVVRVTKVPVVSQIAAVYVSAFRGTPLLVQIFVLYYGLPSVGIEFTPVTAGILA FT LTLNVAAYLSESMRGAILGIDKGQWEAGLSVGLTWGQTLWNIITPQALRLAVPSLSNSL FT ISLIKDTSLISVITVTELMLATKEVIAETFQPLPLYLAAAGIYWLLSALFERVQKALEN FT RLTAPLRR*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_process: ectoine transport [goid GO:0051470] FT [evidence IEA]; FT " FT gene complement(353691..354461) FT /locus_tag="PA0314" FT /gene_synonym="fliY" FT CDS complement(353691..354461) FT /db_xref="GI:15595511" FT /function="Transport of small molecules" FT /protein_id="NP_249005" FT /localization_and_confidence="Periplasmic, Class 3 FT (primary)" FT /product="L-cysteine transporter of ABC system FliY" FT /translation="MRFLPRLLMLVSLAAPLAHAELLDDVHQRGALRIALEGTYPPFNF FT KQGGKLTGFETELGELLAAELAVKPEFVTTEWSGILAGLQSGKYDIALNQVSVNEQRRK FT VFDFSEPYTISSAQLIVRADETRQFKSLEDLKGLKLGVGQGTNYADLAKSVAGVNVRTY FT PGAPEYLQDLASKRIDAALNDRLLIPFAIREAKLPVKPGAAVGPVANMAIPYRKNNPKF FT GEALNAALEKIKADGRFAKLSEKWFGLDVSQPPK*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene 354754..355191 FT /locus_tag="PA0315" FT CDS 354754..355191 FT /db_xref="GI:15595512" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249006" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MRVTLPCLGLAALMFGASASLMAADLPRTKAPEGAKVYFITPADG FT ATVDKTFTVKFGLKGMGVAPAGVDMPDTGHHHLLVDLKEQPAMNLPLPMTDNIRHFGKG FT QTETEITLPPGKHTLQLLVGDKNHVPLEPTVESEKITVTVK*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(355248..356477) FT /locus_tag="PA0316" FT /name="serA" FT CDS complement(355248..356477) FT /db_xref="GI:15595513" FT /function="Amino acid biosynthesis and metabolism" FT /protein_id="NP_249007" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Cytoplasmic, Class 2 (primary); Cytoplasmic, FT Class 3 (primary)" FT /product="D-3-phosphoglycerate dehydrogenase" FT /translation="MSKTSLDKSKIKFLLLEGVHQNAVDTLKAAGYTNIEYLKTALSGD FT ELKERIADAHFIGIRSRTQLTEEVFDCAKKLIAVGCFCIGTNQVDLNAARERGIAVFNA FT PYSNTRSVAELVLAEAILLLRGIPEKNASCHRGGWIKSAANSFEIRGKKLGIVGYGSIG FT TQLSVLAEALGMQVFFYDTVTKLPLGNAVQIGSLHELLGMSDIVSLHVPELPSTQWMIG FT EKEIRAMKKGGILINAARGTVVELDHLAAAIKDEHLIGAAIDVFPVEPKSNDEEFASPL FT RGLDRVILTPHIGGSTAEAQANIGLEVAEKLVKYSDNGTSVSSVNFPEVALPSHPGKHR FT LLHIHANIPGVMSEINKVFADNGINVSGQYLQTNEKVGYVVIDVDAEYSDLALEKLQQV FT NGTIRSRVLF*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: amino acid metabolic process [goid FT GO:0006520] [evidence ISS]; FT GO_process: L-serine biosynthetic process [goid FT GO:0006564] [evidence IEA]; FT " FT gene 356681..358075 FT /locus_tag="PA0317" FT CDS 356681..358075 FT /db_xref="GI:15595514" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249008" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MTREALIESLKPLVEPGKLLDDAASLDAYGKDWTKHFAPAPLAIV FT FPKSVEQVQAIVRWANQHKVGLVPSGGRTGLSAAAVAANGEVVVAFDYMNRILDFNAFD FT RTVVCQPGVVTKQLQTFAEENGLYYPVDFASSGSSQIGGNIGTNAGGIKVIRYGMTRNW FT VAGMKVVTGKGDLLELNKDLIKNATGYDMRQLFIGAEGTLGFVVEATMRLERTPKNLTA FT MVLGTPDFDSIMPVLHAFQSKLDLTAFEFFSDKALAKVLARGDVPRAFETDCPFYALLE FT FEATTEEVANEALATFEHCVEQGWVLDGVMSQSEQQLQNLWKLREYISETISHWTPYKN FT DISVTVSRVPAFLKDIDAIVEANYPDFEVVWFGHIGDGNLHLNILKPENLGKDEFFAKC FT ATVNKWVFETVEKYNGSISAEHGVGMTKRDYLTYTRSETEIAYMKALKAVFDPNGIMNP FT GKIFAE*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_function: glycolate oxidase activity [goid FT GO:0008891] [evidence IEA]; FT " FT gene 358167..358832 FT /locus_tag="PA0318" FT /gene_synonym="hpcE" FT CDS 358167..358832 FT /db_xref="GI:15595515" FT /function="Putative enzymes" FT /protein_id="NP_249009" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="conserved hypothetical protein" FT /translation="MSYQHQYIDGTPIHFPLGKLVCVGRNYAEHAKELNNPVPTEPLLF FT IKPGSCVVPVSGGLSLPQERGSVHYEAEIAVLIGKPLSRKPNREEVLDAISGYAPALDL FT TLREVQAKLKEKGLPWELAKSFDGAGVLSPFVNADQFPDPTDIGIRLTINGEVRQDGNS FT RDMLNPIVPLIQHIAGHFSLQAGDVVLTGTPSGVGPLNSGDELLLELPGASRFETRVL* FT " FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 358931..359920 FT /locus_tag="PA0319" FT CDS 358931..359920 FT /db_xref="GI:15595516" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249010" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="hypothetical protein" FT /translation="MPFHGDAQENTWPNSRASPMSLASKLPRFRWLLPAFVVLVGVVLT FT IVMHWDDRAGLWWKESQASQQQRDESIWLPGYRVVIDAKPLQGLEEEETSDLAYNPATR FT TLFTVTGKRPLLVELSLTGDVLRTIPLLGLSNPEGVAVLENGNVAVTDERRNTLTIFHV FT DPQTAELSTKSLAEFPLGNIGKKNKGFEGIAWDPRQQRLLLSKERDPMTLFSWKSDGGP FT SLSGAMTALPSDDLYMRNVSALSVDPRTGHTLVLSAESHLLLELDEKGEPVSFISLLGG FT FNGLDSKIPRAEGVAIDDEGTIYMVSEPNLFYVFRKKSGERLATSDAD*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 359982..360332 FT /locus_tag="PA0320" FT CDS 359982..360332 FT /db_xref="GI:15595517" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249011" FT /localization_and_confidence="Unknown, Class 3 (primary); FT Unknown (This protein may have multiple localization FT sites), Class 3 (primary)" FT /product="conserved hypothetical protein" FT /translation="MKLRHLPLIAAIGLFSTVTLAAGYTGPGATPTTTTVKAALEAADD FT TPVVLQGTIVKRIKGDIYEFRDATGSMKVEIDDEDFPPMEINDKTRVKLTGEVDRDLVG FT REIDVEFVEVIK*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(360413..361447) FT /locus_tag="PA0321" FT CDS complement(360413..361447) FT /db_xref="GI:15595518" FT /function="Putative enzymes" FT /protein_id="NP_249012" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable acetylpolyamine aminohydrolase" FT /translation="MLTIYSDDHRLHHGRHELIGGQFTPCFEKPSRADMVLDRVKAVGL FT GEVRAPRDFGLEPIRRVHSEGFVRFLQNAWQDWLATGRSHDMLPIAWPTRRLRQTEPDN FT IDGRLGYYSFDAGAPITAGTWQAITSSANVALSGQSELANGARSVFSLCRPPGHHAAAD FT YMGGYCFFNNAAIAAQAFLDRGAGRVAILDVDYHHGNGTQDIFYDRADVLFTSIHGDPR FT FEYPYFLGYADEKGNGVGTGYNFNYPLAAGSDWATWSQALQAAIRQIQAYAADALIVSL FT GVDTFKEDPISQFRLDSPDYLRMGEAIGKLGLATLFVMEGGYAVEEIGINAVNVLQGFE FT GVHR*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene complement(361463..362857) FT /locus_tag="PA0322" FT CDS complement(361463..362857) FT /db_xref="GI:15595519" FT /function="Membrane proteins; Transport of small FT molecules" FT /protein_id="NP_249013" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="probable transporter" FT /translation="MASERNNGILIGGKRPEYVHSAQGTGLRRILGLPALVFFGLVYMV FT PLTMFTTYGVVTEITGGRTASAYLITLAAMLFTAFSYSFMVKKYPIAGSAYSYTSLSFG FT PCVGFLAGWSLLLDYLFLPMINYLLIGLFLNIAFPMVPAWVFVLAAIGLVTVLNVIGIS FT SVAGMSNVIVGAQFVFAVVFVAMAVKHLAGIPSLDLSLPFVGDGSQPGFAPLMAGAAVL FT CLSFLGFDAVSTLAEETRDPQRDIPRAIVITTVGAGLLFTVLAVFSQLVFPGSVFQDAE FT SAANEVMLAAGGKFLASFFTAAYVAGAAGSALASQASVSRILYSMGRDGILPRRVFGSL FT SERFKTPVIAILVVSVISLLAVVIDLTTLASMISFGALVAFSAVNLAVIRSYLLLDGRR FT APRDLLRYGLVPAIGLGLTLWLWTSLSALTLVIGLTWFAAGLAYLALHTGGFRRKAPTV FT TFSEQN*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene complement(363278..364321) FT /locus_tag="PA0323" FT CDS complement(363278..364321) FT /db_xref="GI:15595520" FT /function="Transport of small molecules" FT /protein_id="NP_249014" FT /localization_and_confidence="Periplasmic, Class 2 FT (primary); Periplasmic, Class 3 (primary)" FT /product="probable binding protein component of ABC FT transporter" FT /translation="MTYRTPLTLLFAAGLALGGQARAEGTLHFANWSDYYPPELLKKFE FT KDTGIKATLDAYDSNETLLAKLKAGGGAYDVVVPSDSFIEIFVKEGLLQKLDKSQLPSL FT GNLKENFRTLGFDPGHDYSIPYLWGTTGYSYDTAKVPGGRLEESWKPFFEPPAELKGKV FT VALNSIEELFIPATYYLGIDECTEDAREAQKVLDLLLRQKPALAMYNSDGTIERMAAGE FT VAMHQQWNGAFHRAHAQRASLEYVYPKEGIRLFIDNFAIPRDASNVKEAHVFIDWMMRP FT ENIAAASNFAKYNNAIVGSEKFMEKALFDDPAINTPQDKLDRLKPFKLCSPKALALRSK FT VWTKLKK*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_component: ATP-binding cassette (ABC) FT transporter complex, substrate-binding subunit-containing FT [goid GO:0055052] [evidence IEA]; FT " FT gene complement(364369..365157) FT /locus_tag="PA0324" FT CDS complement(364369..365157) FT /db_xref="GI:15595521" FT /function="Membrane proteins; Transport of small FT molecules" FT /protein_id="NP_249015" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="probable permease of ABC transporter" FT /translation="MNGRNPLWTFSGVRQAAWLFFAFLYIPILVLVVLSFNSGQSATLW FT ESFSLKWYAVVANDPEILRAAKNSLLVATLATLASTVLATLAALGMRGRAFRGQTLMNG FT VLGLPLLVPEIVTAVATLMFFSFIGLKLSLFTILIAHIVFCIPFAYLPIRARLEGLDPR FT LAEAAADLYASPWKAFWKITLPLLMPGVLSGAMLAFIISMDDFVITYFVAGAGATTLPV FT YIFSSIRMGISPKINAISSIILMISIAFVALSYYLGQRRR*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_component: ATP-binding cassette (ABC) FT transporter complex, substrate-binding subunit-containing FT [goid GO:0055052] [evidence IEA]; FT " FT gene complement(365154..366083) FT /locus_tag="PA0325" FT CDS complement(365154..366083) FT /db_xref="GI:15595522" FT /function="Membrane proteins; Transport of small FT molecules" FT /protein_id="NP_249016" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="probable permease of ABC transporter" FT /translation="MSTAGRPTAQQSAERRQLRRRLLLSSPAMLMLVLFLVIPLGIMFA FT VSIQQSGDYGGVKWGQHSLEAYLNFLWERDLDDSLVFNADYLGIFQRSFWLSLLTTLGC FT LALGFPTALYLALQPERRRNLLLFLVTVPFWTNLLVRVYAWILLLRNGGLVDAGLQGIG FT LTDTGLGLLYTDNAVIIGLLYTYLPFMVLPIYSSLEKMDWRLVEAAFDLGANRWKALRR FT VIVPLAMPGIVAGCILVFIPALGSYIIPELLGGGKALMIGNLIQLQFGTAHNWPFGAAL FT SFALLAFVLLAMLIYNLRFRANAGGGQP*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_component: ATP-binding cassette (ABC) FT transporter complex, substrate-binding subunit-containing FT [goid GO:0055052] [evidence IEA]; FT " FT gene complement(366080..367129) FT /locus_tag="PA0326" FT CDS complement(366080..367129) FT /db_xref="GI:15595523" FT /function="Transport of small molecules" FT /protein_id="NP_249017" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 2 (primary); Cytoplasmic Membrane, Class 3 (primary)" FT /product="probable ATP-binding component of ABC FT transporter" FT /translation="MTSAIAIERICMEFGTPGQGLKALDDVSLDIHANEFFTLLGPSGC FT GKTTLLRLIAGFEQPSSGSIRLYGEHMEGLPPFRRPVNTVFQSYALFPHMSVADNIGFG FT LEMQGRPRSEIDATVSRMLDLVKLPEVGKRRADQLSGGQQQRIALARALASRPKVLLLD FT ESLSALDLKLRKEMQIELKRLQHETGITFIFVTHDQEEALTMSDRIAVMSKGKVLQVGT FT PSDIYEAPLNRAVADFIGETNFLEGQADADGVRLADGQRLAATTPGSGAVTLAIRPERT FT ELAADGQLEGVLENIVYVGTDTVYHLNVAGQPGFRVRQQNRDGARCPHSPGAKVRVRIP FT AAAIRVLAE*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_component: ATP-binding cassette (ABC) FT transporter complex, substrate-binding subunit-containing FT [goid GO:0055052] [evidence IEA]; FT " FT gene 367457..368422 FT /locus_tag="PA0327" FT CDS 367457..368422 FT /db_xref="GI:15595524" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249018" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="hypothetical protein" FT /translation="MTIHAQTPEPFSMSRAFTPRRLLLAVLLVALSALVLLGQSFRVFD FT RAWFAVQEWRHADAWKERSIWLPDYRVRIEAQPIEGLNDDVSALTFDPDRRTLFTVTNQ FT PAQIIELSLQGKVLRTIPLTGFGDAEAIEYISRGVYVITDERQQRLVKVRLEDDTRFID FT AADAQQLSLGIGLNGNKGFEGLAYDAEGKRLFVAKERDPVRIYEIHGFPHTQADKPFAV FT HVVDDPGRDKRLFVRDLSSLQFDEGTGHLLALSDESRLVVELDTDGEPVSTLSLLRGMH FT GLKRSVPQAEGVAMDDRGVLYLVSEPNLFYVFSKDEPAQP*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(368462..370405) FT /locus_tag="PA0328" FT CDS complement(368462..370405) FT /db_xref="GI:15595525" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249019" FT /localization_and_confidence="Outer Membrane Vesicle, FT Class 1 (secondary); Outer Membrane, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="VFKPLAVAVGLGCAALSLGANAYQYGEYAGETLERLITDYPGRYR FT GTASFAGASKLMQSRLGFGYQTSRQDFTWAGNRSSQNVIASAPGSSGKFLVLGAHYDTY FT YGRPTLQGLDDNASGAAVLTEIARNLGGIALENGLEVVGFGAEEEGLRGSRAYVESLDA FT SQRANLLGMINLDSLVTGDKMYAHAGSNSVSNPALGAYREQILRIARELDIPLFTNPGL FT NAEYPAGTGCCSDGESFNGMDIPVLFIEATNWELGDLDGYEQTDNPAIPGGSTWHDPAE FT DNKEVLTNALGQERIEQRMRDFSRLLTRLVLEQTNADLLASTASGGALARQMEDQLQRQ FT HQALTRLHDRRWLTLLGSNRPVGSFDGEVGAEGEVSPDSGFDMPGNPESRRAGVHLLGD FT YRYSEALTLGGSLAFQRSRDKLDHGGRIEGDTWQLGLFGLYNDGGPEWLAGELNLGHTR FT YDSKRSVYLQAAGGPVLLDQRLSGDTSAWSWGARLEGGYDFSFGELRSGPLAGLDYMHY FT RIDDFREDEALRTALGYEKQDYDSLEASLGWRLRGELALGARMRLQPYASLRWVRELAD FT GRLDDMDLTSRGDGRVRVADMGGVDKDFGRAQLGAQLAITEQLGVFAEANSRFAHSEGN FT QAGYSLGVNWQF*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_process: protein secretion by the type V FT secretion system [goid GO:0046819] [evidence IEA]; FT " FT gene complement(370706..371038) FT /locus_tag="PA0329" FT CDS complement(370706..371038) FT /db_xref="GI:15595526" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249020" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="conserved hypothetical protein" FT /translation="MAAKFHLKKAKDGQFHFNLHAANGEIILTSELYKAKDSALGGIES FT VRKNSQRDGAFEVKPANNGKFHFVLKATNGQVVGQSQLYASQANAEAGVQSVKRATPEA FT GLSDES*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(371162..371833) FT /locus_tag="PA0330" FT /name="rpiA" FT CDS complement(371162..371833) FT /function="Energy metabolism" FT /product_synonym="phosphoriboisomerase; ribose 5-phosphate FT epimerase" FT /protein_id="NP_249021" FT /note="GO_process: generation of precursor metabolites and FT energy [goid GO:0006091] [evidence ISS]; FT GO_process: pentose-phosphate shunt [goid GO:0006098] FT [evidence IEA]; FT " FT /db_xref="GI:15595527" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="ribose 5-phosphate isomerase" FT /translation="MNQDQLKQAVAQAAVDHILPHLDSKSIVGVGTGSTANFFIDALAR FT HKAEFDGAVASSEATAKRLKEHGIPVYELNTVSELEFYVDGADESNERLELIKGGGAAL FT TREKIVAAVAKTFICIADASKLVPILGQFPLPVEVIPMARSHVARQLVKLGGDPVYREG FT VLTDNGNIILDVHNLRIDSPVELEEKINAIVGVVTNGLFAARPADLLLLGTADGVKTLK FT A*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene 372091..373605 FT /locus_tag="PA0331" FT /name="ilvA1" FT CDS 372091..373605 FT /function="Amino acid biosynthesis and metabolism" FT /product_synonym="threonine deaminase" FT /protein_id="NP_249022" FT /note="GO_function: phosphoenolpyruvate carboxykinase FT (ATP) activity [goid GO:0004612] [evidence ISS]; FT GO_process: amino acid metabolic process [goid GO:0006520] FT [evidence ISS]; FT GO_process: glycine metabolic process [goid GO:0006544] FT [evidence ISS]; FT GO_process: L-serine metabolic process [goid GO:0006563] FT [evidence ISS]; FT GO_process: threonine metabolic process [goid GO:0006566] FT [evidence ISS]; FT GO_process: isoleucine biosynthetic process [goid FT GO:0009097] [evidence IEA]; FT " FT /db_xref="GI:15595528" FT /localization_and_confidence="Cytoplasmic, Class 1 FT (primary); Periplasmic, Class 1 (primary); Cytoplasmic, FT Class 3 (primary)" FT /product="threonine dehydratase, biosynthetic" FT /translation="MLEQYVKKILTSRVYDVAVETPLQPARQLSERLGNQVLLKREDLQ FT PVFSFKIRGAYNKVAQLTEEEKARGVIAASAGNHAQGLALAAKRQGIRAVIVMPKTTPE FT IKVQAVRAHGAKAVLHGDAFPEALAHALKLVDEKGYTFVHPYDDPDTIAGQGTVAMEIL FT RQQPGRLDAIFVPVGGGGLVAGIAAYVKYLRPEIKVIGVEPDESNCLQAAMAAGERVVL FT GQVGLFADGVAVAQIGQHTFDICKDHVDEVITVSTDEICAAIKDIYDDTRSITEPAGAL FT AVAGIKKYVERERAEGQTLVAIDSGANVNFDRLRHVAERAELGERREAIIAVTIPERPG FT SFKAFCEAVGKRQITEFNYRYHSGSEAHIFVGVQTHPENDPREALVAYLREKGFPVLDL FT TDNELAKLHIRHMVGGHAVKVSDEMVFRFEFPERPGALFNFLTKLGGRWNISMFHYRNH FT GAADGRVVAGLQVPEDERHLIPQTLEAIGYPYWDETANPAYQLFLG*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene 373725..374192 FT /locus_tag="PA0332" FT CDS 373725..374192 FT /db_xref="GI:15595529" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249023" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="hypothetical protein" FT /translation="MEHFLQIKILHGVATVLLFGGLLGLAFYAWRSWRTGDAARVARGF FT KRVRLIGWPLLGLSLLALPVSGWWLVHLAGWPLGQSWLLFGACLYLLGCIFWLVLAGRL FT ARVQHQAGAAETAGAALGEQTLREIKVGLVMALLGAASFIAVAVLMVSKPL*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 374243..375514 FT /locus_tag="PA0333" FT CDS 374243..375514 FT /db_xref="GI:15595530" FT /function="Putative enzymes" FT /protein_id="NP_249024" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="hypothetical protein" FT /translation="MRILLVGAGGFVGRHLLPALLAAGHELLLTARRPPVDAPAGVRWL FT ALDLERLAERPDSFAWPAGVDLLINAAGTMSLDEASMARVQDSGARTLFDLAAAHGAKV FT LQISALGAGAHPDVAFLASKAAADRHLLELGIPALVLRPSLLLGPGGASSAWLERLSPL FT PLIPLLDNRARLQPLHVEDLVGAVLALLRCWPERAQVIPLVGPQALTQGELLDELRRAQ FT GWPRGRYVVPPAALLDALGGLGRRAGWRTLSPSMLKLVRHDNLADPALLDEACGYRCAP FT LASRLLGWPQAARSLAALMRPLMLAALVLIWLGTLVACLGPGYGWGLRILGEAGIHGWP FT ASLAVIAGALLDGALGVGLLLRRWRRRALLAQFWLMLGYSLAISLILPHYWYDPYMAVG FT KNIVLMVATLWLLGDEPRTREARG*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(375951..377189) FT /locus_tag="PA0334" FT CDS complement(375951..377189) FT /function="Membrane proteins; Transport of small FT molecules" FT /product_synonym="probable MFS transporter" FT /protein_id="NP_249025" FT /db_xref="GI:15595531" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="probable major facilitator superfamily (MFS) FT transporter" FT /translation="MPHTPAPGSLRPVVIVALVTALCLAGDSMLYIALPIYWHEVGLEA FT LWQVGVLLSINRLIRLPFNPLIGRLYKHLALKTGLLLAVVIGVLSTAGYGLASGFLAWV FT LLRGLWGIGWSFFRIGGLSAVVYCAADHQRGHAMGLYNGLYRLGSLVGMLLGGLLVPVL FT GLPALALSFALLALLGLPLLAKGFDLPENPAGHARTSAATASTSVARRPPPRGLVILSG FT FATALLIQGVLAATLSALIARSFGTEVSLLGLALSAAGLSGIIQALRWSWEPWLAGRFG FT AWSDGPRGRRRFYVAALLVGAMGFGLLSSRLPILAWLAIALLVMLVATALTTLTDALAA FT DVARAGDVVGFMTRYSIVQDLGAALGPALAFLLLERPGGFAWLYWGGSLAFLVLALLWL FT RRADPQTGLLTIR*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene complement(377239..377892) FT /locus_tag="PA0335" FT CDS complement(377239..377892) FT /db_xref="GI:15595532" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249026" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="VRLALFDLDNTLLAGDSDHSWGEWLCQRGLVDAAEYQARNDAFYA FT DYVAGKLDVLAYQAFTQAILGRTEMAQLETWHRQFMQEVIEPIVLAKGEALLAEHRAAG FT DRLVIITATNRFVTGPIAERLGVETLIATECEMRDGRYTGQTFDVPCFQGGKVVRLQRW FT LDENGLDLEGASFYSDSLNDLPLLEKVSRPVAVDPDPRLRAEAEKRGWPIISLR*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_function: hydrolase activity [goid GO:0016787] FT [evidence IEA]; FT " FT gene 378096..378575 FT /locus_tag="PA0336" FT /name="ygdP" FT CDS 378096..378575 FT /function="Nucleotide biosynthesis and metabolism" FT /product_synonym="dinucleoside oligophosphate FT pyrophosphatase" FT /protein_id="NP_249027" FT /note="GO_process: nucleotide metabolic process [goid FT GO:0009117] [evidence ISS]; FT GO_function: catalytic activity [goid GO:0003824] FT [evidence RCA]; FT GO_process: metabolic process [goid GO:0008152] [evidence FT RCA]; FT GO_function: hydrolase activity, acting on acid FT anhydrides, in phosphorus-containing anhydrides [goid FT GO:0016818] [evidence IEA]; FT " FT /db_xref="GI:15595533" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="Nudix hydrolase YgdP" FT /translation="VIDSDGFRPNVGIILANEAGQVLWARRINQEAWQFPQGGINDRET FT PEEALYRELNEEVGLEAGDVRILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRL FT MSDEARVRMDITSKPEFDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLARD*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene 378598..380877 FT /locus_tag="PA0337" FT /name="ptsP" FT CDS 378598..380877 FT /function="Transport of small molecules" FT /product_synonym="phosphotransferase system enzyme I" FT /protein_id="NP_249028" FT /note="GO_process: transport [goid GO:0006810] [evidence FT ISS]; FT GO_function: phosphoenolpyruvate-protein FT phosphotransferase activity [goid GO:0008965] [evidence FT RCA]; FT GO_process: phosphoenolpyruvate-dependent sugar FT phosphotransferase system [goid GO:0009401] [evidence FT RCA]; FT GO_process: phosphoenolpyruvate-dependent sugar FT phosphotransferase system [goid GO:0009401] [evidence FT IEA]; FT " FT /db_xref="GI:15595534" FT /localization_and_confidence="Cytoplasmic, Class 2 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="phosphoenolpyruvate-protein phosphotransferase FT PtsP" FT /translation="MLNTLRKIVQEVNSAKDLKAALGIIVQRVKEAMGTQVCSVYLLDT FT ETQRFVLMATEGLNKRSIGKVSMAPSEGLVGLVGTREEPLNLENAAAHPRYRYFAETGE FT ERYASFLGAPIIHHRRVMGVLVVQQKERRQFDEGEEAFLVTMSAQLAGVIAHAEATGSI FT RGLGKLGKGIQEAKFVGVPGAPGVGVGKAVVVLPPADLEVVPDKQVDDIDAEIALFKQA FT LEGVRADMRALSSKLASQLRKEERALFDVYLMMLDDASIGNEVKRIIRTGQWAQGALRQ FT VVMEHVQRFELMDDAYLRERASDVKDIGRRLLAYLQEERKQNLTYPEQTIIVSEELSPA FT MLGEVPEGRLVGLVSVLGSGNSHVAILARAMGIPTVMGAVDLPYSKVDGIDLIVDGYHG FT EVYTNPSAELVRQYSDVVAEERELSKGLAALRELPCETLDGHRMPLWVNTGLLADVARA FT QERGAEGVGLYRTEVPFMINDRFPSEKEQLAIYREQLSAFHPLPVTMRTLDIGGDKALS FT YFPIKEDNPFLGWRGIRVTLDHPEIFLVQTRAMLKASEGLDNLRILLPMISGTHELEEA FT LHLIHRAWGEVRDEGVDIAMPPIGMMVEIPAAVYQTRELARQVDFLSVGSNDLTQYLLA FT VDRNNPRVADLYDYLHPAVLHALKKVVDDAHLEGKPVSICGEMAGDPAAAVLLMAMGFD FT SLSMNATNLPKVKWLLRQITLDKARDLLGQLLTFDNPQVIHSSLHLALRNLGLGRVINP FT AATVQP*" FT /product_name_confidence="Product name confidence: Class FT 1: Function experimentally demonstrated in same species." FT gene 380903..382033 FT /locus_tag="PA0338" FT CDS 380903..382033 FT /db_xref="GI:15595535" FT /function="Hypothetical, unclassified, unknown; Motility & FT Attachment" FT /protein_id="NP_249029" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="VRRLRFPRKRIDCLPFGRGHWPVERARDCRKMDERASKPPGLLPL FT SREDLEKTLRYALEIVSDGIWDWNIATNQVSRSAGWYLMLGYPPHSLPESVETWKSIIH FT PEDYPRVMASFQAYLDGESPEYCEEYRCRTYSGDYLWISDRGRFVEFDERGEPRRMIGA FT HHEIHQRKLVELELQQRNEELFDWNLRLEELVAERTEALHRVNQALASKMAEAQRLSEI FT DPLTELYNRRKFEQCLHHEWMRRQRHGRATALVMIDVDHFKRINDLFGHSTGDRVLVAF FT GRLVASELREVDVLARWGGEEFILLLPETGLEAAAALAERLRQRVRSQSFEMGERLTAS FT FGVGVLNDGETLDLLLCRVDDALYRAKQRRDCVACC*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_function: cyclase activity [goid GO:0009975] FT [evidence IEA]; FT " FT gene complement(382037..382792) FT /locus_tag="PA0339" FT CDS complement(382037..382792) FT /db_xref="GI:15595536" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249030" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MCLIVFAWQPGHALPLLVAANRDEFYARPSLPLAAWEDAEGVFAG FT RDLEAGGTWLGLGPAGRFAALTNVRDPSQALGKRSRGELVADFLRGGGNPADYLAQVAG FT RAADYSGFNLLIGDRHQLWHYNPRVGPPRLLPAGIYGLSNAALDTPWPKLLKARAALAE FT RLAEPHPQALLELLADAAPAADGQLPDTGVGLATERLLSSVFIASPSYGTRASSVVRVH FT ADGTREMIERSFGPSGARLGEVSLVLPPG*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 382914..383717 FT /locus_tag="PA0340" FT CDS 382914..383717 FT /db_xref="GI:15595537" FT /function="Membrane proteins" FT /protein_id="NP_249031" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="conserved hypothetical protein" FT /translation="MEFLLYIVLGACAGVLAGLFGVGGGLIIVPALVFSFTAHGFGGDV FT LTQMAVGTSLATIVFTSINSILEHHRRGAVRWPVFAWMTLGILIGSALGALTAAQIKGP FT LLQKIIGVFAILVALQMVLDLKPKGSREVPGKGGLTLAGAVIGWASAIFGIGGGSLTVP FT FLSWRSVPMQQAVATSSACGLPIAISGALSFIAVGWHNPQLPEWSLGYVYLPALVGIAA FT TSMLFARFGARLAHRLSPRVLKRLFALLLFSVGISFLTPDLAFLS*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 383727..384527 FT /locus_tag="PA0341" FT /gene_synonym="umpA" FT /name="lgt" FT CDS 383727..384527 FT /db_xref="GI:15595538" FT /function="Translation, post-translational modification, FT degradation; Fatty acid and phospholipid metabolism" FT /protein_id="NP_249032" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 2 (primary); Cytoplasmic Membrane, Class 3 (primary)" FT /product="prolipoprotein diacylglyceryl transferase" FT /translation="MLTYPQIDPVALAIGPLKIHWYGLMYLIGIGGAWLLASRRMKRFD FT PTWTKERLSDLVFWVACGVILGGRLGYVLFYNLDEYIANPTLIFEVWKGGMSFHGGLLG FT VMLAVWWFGKRHGKSFFQLMDFIAPLVPIGLGAGRIGNFINSELWGKVSDVPWAMVFPN FT GGPLPRHPSQLYQFALEGVALFVILWLFTRKPRPTASVSGLFVLCYGIFRFVVEFVRVP FT DAQLGYLAWGWLTMGQVLCVPMVLAGIALMVWAYRRDAAQPKAA*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: cellular lipid metabolic process [goid FT GO:0044255] [evidence ISS]; FT GO_process: cellular protein metabolic process [goid FT GO:0044267] [evidence ISS]; FT GO_component: integral to membrane [goid GO:0016021] FT [evidence IEA]; FT " FT gene 384733..385527 FT /locus_tag="PA0342" FT /name="thyA" FT CDS 384733..385527 FT /db_xref="GI:15595539" FT /function="Biosynthesis of cofactors, prosthetic groups FT and carriers; Nucleotide biosynthesis and metabolism" FT /protein_id="NP_249033" FT /localization_and_confidence="Cytoplasmic, Class 2 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="thymidylate synthase" FT /translation="MKQYLDLMRHVREHGTFKSDRTGTGTYSVFGHQMRFDLAAGFPLV FT TTKKCHLKSIVHELLWFLKGSTNIAYLKEHGVSIWDEWADENGDLGPVYGYQWRSWPAP FT DGRHIDQIANLMAMLKKNPDSRRLIVSAWNPALIDEMALPPCHALFQFYVADGKLSCQL FT YQRSADIFLGVPFNIASYALLTLMVAQVAGLQPGEFIWTGGDCHLYANHLEQADLQLTR FT EPLPLPSMKLNPEVKDLFDFRFEDFELVGYEAHPHIKAPVAV*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: cofactor biosynthetic process [goid FT GO:0051188] [evidence ISS]; FT GO_process: nucleotide metabolic process [goid GO:0009117] FT [evidence ISS]; FT GO_function: thymidylate synthase activity [goid FT GO:0004799] [evidence RCA]; FT GO_process: 2'-deoxyribonucleotide biosynthetic process FT [goid GO:0009265] [evidence RCA]; FT GO_process: 2'-deoxyribonucleotide biosynthetic process FT [goid GO:0009265] [evidence IEA]; FT " FT gene complement(385554..386351) FT /locus_tag="PA0343" FT CDS complement(385554..386351) FT /db_xref="GI:15595540" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249034" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="MPFVSYAQNLEDVRLWRALKLFPRGFYIDVGANHPRIDSVTLAFY FT ERGWRGINIEPLPHLHRELERERPEDLNLNLAIGEREGRATLYEMAASGLSTLDPELAR FT QRQAEGCTATPREVKVSTLDAICAAHVEGPIHFLKIDVEGLEGAVLRGLDLNRWRPWLI FT LAETPFDHDPEWKAPLLAAGYRFVHFDGLNGYYLAEEQARLEGAFALPPNLLDDFQLCH FT GHAMSHPVAPLEQALEQALQRAEDAERALRDWRALPWYRRLFG*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(386386..387765) FT /locus_tag="PA0344" FT CDS complement(386386..387765) FT /db_xref="GI:15595541" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249035" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="hypothetical protein" FT /translation="MTEPLILAVVGHTNTGKTSLLRTLTRDRGFGEVSHRPSTTRHVEG FT ARLSVDGEALLELYDTPGLEDAIALLDYLDALERPGERLDGPERMARLLDSNEARGRFE FT QEAKVVRQLLASDAGLYVIDAREPVLAKYRDELAVLTGCGRPLLPVLNFVASPQHREEE FT WRAALARLGLHALVRFDSVAPPLDGERRLYESLALLLERARPQLDRLIADHETQAAARL FT RAGQRLIAELLVDVAACRRLVPGGESAVQEATRDLHQQVRKREQACVEALLRLYAFARD FT DARAADLPLLDGRWGDDLFNPETLRQLGIRLGGGVAAGAAAGAGIDLLVGGVTLGAAAA FT LGALAGGAWQTVGHYGSRLLGKLKGARELTVNDAVLRLLALRQRQLLAALQTRGHAAVE FT AIRLETPEDKQWREGKLPEALRKARAHPEWSSLNGRRVGGSDRQEQIDALAELLESGRG FT E*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_function: GTP binding [goid GO:0005525] FT [evidence IEA]; FT " FT gene complement(387758..389143) FT /locus_tag="PA0345" FT CDS complement(387758..389143) FT /db_xref="GI:15595542" FT /function="Hypothetical, unclassified, unknown; Membrane FT proteins" FT /protein_id="NP_249036" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="hypothetical protein" FT /translation="LSHTTHPGLDALWLTEAVRLREEQAGPLEDSEAVRQALAQGGSLP FT RRILTRAHWLGRREGLLDALRTWRQGSRLALALLLVLALASGAGLAFAALGDGQRPVNV FT FWALASLLGLHLLTLLGWALGLLAGGEAAGALGRLWLWLSGKLARDARAAHLAPALLVL FT LGRRRLARWGLGALVHGLWLLGLLTALAMLLGLLATRRYGFVWETTILGSDTFIALTQA FT LGALPALLGFPLPDAELIRASGDAALASEAARHAWAGWLVGVLLVYGVLPRALLGLLCL FT WRWKRGLAHLDLDLDDPGYSLLRERLMPASERLGVSDAAPDWLPEPQGGQSGQEAAGAV FT LVAVELDDRRPWPPKLAEGVADAGILDDGQQRRRLLEQLTRYPPARLAIACDPRRSPDR FT GTLALLGELARCAASTRIWLLQAPPGEALDSDRLGDWHAALERLQLPHGETSPLAWLET FT GHD*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 389334..389696 FT /locus_tag="PA0346" FT CDS 389334..389696 FT /db_xref="GI:15595543" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249037" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MKVVRRYPLALLLGMAGALADELPDGSLLQRYGVQADQLPTLAAD FT PPSRKEEKETPSRFRVEPEQPLVTFGVKDHKGMEPTGNPSIDAMHERDRRICRNIRRQA FT LEKGKAQPFDGYIECP*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(389733..390884) FT /locus_tag="PA0347" FT /name="glpQ" FT CDS complement(389733..390884) FT /function="Fatty acid and phospholipid metabolism" FT /product_synonym="glycerophosphodiester phosphodiesterase" FT /protein_id="NP_249038" FT /note="GO_process: cellular lipid metabolic process [goid FT GO:0044255] [evidence ISS]; FT " FT /db_xref="GI:15595544" FT /localization_and_confidence="Periplasmic, Class 3 FT (primary)" FT /product="glycerophosphoryl diester phosphodiesterase, FT periplasmic" FT /translation="MQPAFLRRHLGAACLMLAAGLASAAHADTGNVQRAIDWAQGQASV FT RHPASDERSPLVIAHRGASGYVPEHTLGAYALAVMMGADYVEPDLVMTRDGKLVARHDN FT ELGLTTDVAQHPEFADRKRTQKVDGVELTGWFSEDFTLAELKTLRAIERIPTIRPGNAR FT LDGTFEIPTLQEIIDLVKSLQISQQRTIGLYPEIKHGTHFQRLGLAMERPLVKTLHRNG FT YLGPRAPVFIQSFEVNNLKELKRLTGIRLVQLYGSGQPYDQQAAGGSLTYAEMATAKGL FT RQVARYAYGVGPDKSYVIPRDANGNLGQPTRFVGDAHAAGLKVHPYTFRAENSFLPAEF FT RSADGNPQSRGDLAGEIRAYLDAGIDGLFSDQPDVAVRLREQR*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene 391094..392188 FT /locus_tag="PA0348" FT CDS 391094..392188 FT /db_xref="GI:15595545" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249039" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MASAQPASAFPCLSLQLACLLLGAWLAFDAHGGGQAVAPPARVEA FT RVPTAATDDWGRQPDSLMSAVPPRTLEASVGARGSGSASSRLWIADTDFRLHDDIGFFI FT QRMLIRMEPTRPGAPLSLDDPTAMVARIQAGEIFVSDATLATLLNQDLAASRAAVRNLS FT MNTRKDGQEVRGELLRKGRWRPLRMLTEIELSGPLEVTLVPRRIFVDGVEVTSSLAAAS FT IEMSEVLKLKTRHMELVGNRIRVDLDGLFPPPRLDFRVSRLALADGGMQLALGDSLADL FT QWPALRAPDSYMFIEGGDIKMARTVLVKAYALFTSLSPGQPLLFNLYDYRRQLQNGVIR FT LREDGMVQIAVSPVKAPAPLEARL*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 392185..393225 FT /locus_tag="PA0349" FT CDS 392185..393225 FT /db_xref="GI:15595546" FT /function="Membrane proteins" FT /protein_id="NP_249040" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="VSRRPWGVLLGCCLLAASAAQAESAIDRQQRELALLREGWYRQVP FT PAPVPLPMRTAGPADSGQDGVGILLRNVDMYLRGNIGFHVPEVKGWLVPNRAGQPVDFD FT RPQDMHFQVMEGEVLLSPRQLANLFNEHILAYDGTMLKDFRMSSAAGRLEVEGRVRPLG FT VGPWLPLRLGGGVEVDAASGALVYRPDQLRVIGLPLYGAMSLVGLPMSALVSLDRPGAS FT LVGSAMRLDYRKVFPLLGIDGHVQEAWLDDQGLHLRFSQAPGQPSPVFSPPAAAGPSFL FT WLQSGDLKIFEILITYAQVLLKTETPDQVLTFNLQDYRKVLATGTTQVNEDGTFFMQVP FT PYANPL*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 393308..393814 FT /locus_tag="PA0350" FT /gene_synonym="tmrA" FT /name="folA" FT CDS 393308..393814 FT /db_xref="GI:15595547" FT /function="Biosynthesis of cofactors, prosthetic groups FT and carriers" FT /protein_id="NP_249041" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="dihydrofolate reductase" FT /translation="MARPLAMIAALGENRAIGIDNRLPWRLPADLKHFKAMTLGKPVIM FT GRKTWDSLGRPLPGRLNLVVSRQAGLALEGAEVFASLDAALARAEAWAQAEDADELMLI FT GGAQLYAEALPRAARLYLTRVGLAPEGDAFFPEIDGAAWRLASSIEHAAADDAPAYAFE FT VWERR*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: cofactor biosynthetic process [goid FT GO:0051188] [evidence ISS]; FT GO_process: folic acid and derivative metabolic process FT [goid GO:0006760] [evidence RCA]; FT GO_function: dihydrofolate reductase activity [goid FT GO:0004146] [evidence RCA]; FT " FT gene complement(393830..394303) FT /locus_tag="PA0351" FT CDS complement(393830..394303) FT /db_xref="GI:15595548" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249042" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="conserved hypothetical protein" FT /translation="MPQSRRPLRIGLIADTHGLLRPEALERLRGCDQLIHAGDIGKPEI FT LAELERLAPLSVVRGNNDTQDWAADIPERLLLKIGRLTLYVLHDLKRLDLDPAAEGIDV FT VVAGHSHKPLKEERDGVLYLNPGSAGPRRFSLPIGIGVLEVAGKKIEAELITL*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_function: hydrolase activity, acting on ester FT bonds [goid GO:0016788] [evidence IEA]; FT " FT gene complement(394442..395827) FT /locus_tag="PA0352" FT /gene_synonym="yicE" FT CDS complement(394442..395827) FT /db_xref="GI:15595549" FT /function="Membrane proteins; Transport of small FT molecules" FT /protein_id="NP_249043" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="probable transporter" FT /translation="MSSLQSPSDASARNDLVYGLDDRPSAPIALLAALQHLLAIIVPIV FT TPGLLICQALGVSPRDTNLIVSMSLVISGIATFVQCKRFGPFGAGLLIVQGTSFNFVGP FT LIAGGALMVKQGTPVESVMAAIFGVVIAGSFVEMGISRILPFVKRLITPLVTGIVVLMI FT GLTLIKVGLISMGGGFSAMSNGTFANGENLLLSGVVLGIIVVLNRIPVVWMRSCAIVIA FT LAVGYALAGYLGRLDFTGMHQAELFQVPTPLHFGLDFSWPLFIPMLVIYLVTSLEAIGD FT VTATSKVSKQPVEGPLWMQRIKGGVLVNGANSFLAGIFNTFPSSVFAQNNGVIQLTGVA FT SRYVGLWIAAMLVLLGLFPSVAGVIQAVPEPVLGGAAMVMFGAVAASGINILAGIQLDR FT RALLIIAVSLALGLGVSQVPEFLAHMPAALRNVLESGVATGGICALLLNWFLPESPVQK FT AGH*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_function: xanthine transmembrane transporter FT activity [goid GO:0042907] [evidence IEA]; FT " FT gene complement(396057..397895) FT /locus_tag="PA0353" FT /name="ilvD" FT CDS complement(396057..397895) FT /db_xref="GI:15595550" FT /function="Biosynthesis of cofactors, prosthetic groups FT and carriers; Amino acid biosynthesis and metabolism" FT /protein_id="NP_249044" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="dihydroxy-acid dehydratase" FT /translation="MPDYRSKTSTHGRNMAGARALWRATGMKDEDFKKPIIAIANSFTQ FT FVPGHVHLKDLGQLVAREIEKAGGVAKEFNTIAVDDGIAMGHDGMLYSLPSREIIADSV FT EYMVNAHCADAIVCISNCDKITPGMLMAALRLNIPVVFVSGGPMEAGKTKLASHGLDLV FT DAMVVAADDSCSDEKVAEYERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSTLAT FT HADREQLFLRAGRLAVELCQRYYGEGDDSVLPRNIANFKAFENAMTLDIAMGGSTNTIL FT HLLAAAQEAEVPFDLRDIDRLSRKVPQLCKVAPNIQKYHMEDVHRAGGIFSILGELARG FT GLLHTDVPTVHSPSMADAIAQWDITQTRDEAVHTFFKAGPAGIPTQTAFSQNTRWPSLD FT DDRAEGCIRSVEHAYSKEGGLAVLYGNIALDGCVVKTAGVDESIHVFEGSAKIFESQDA FT AVKGILGDEVKAGDIVIIRYEGPKGGPGMQEMLYPTSYLKSKGLGKQCALLTDGRFSGG FT TSGLSIGHASPEAAAGGAIGLVQDGDKVLIDIPNRSINLLVSDEELAARRAEQDKKGWK FT PAAPRARRVSTALKAYALLATSADKGAVRNKALLDG*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: amino acid metabolic process [goid FT GO:0006520] [evidence ISS]; FT GO_process: cofactor biosynthetic process [goid FT GO:0051188] [evidence ISS]; FT GO_process: valine biosynthetic process [goid GO:0009099] FT [evidence IEA]; FT " FT gene complement(398224..399420) FT /locus_tag="PA0354" FT CDS complement(398224..399420) FT /db_xref="GI:15595551" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249045" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="conserved hypothetical protein" FT /translation="MTLPSLRLKANAERRLRAGHLWVYSNEVDVAATPLNAFAAGDQAV FT LEMANGKPLGIVALSPNNLICGRLISRDTKHVLDKSLLVHRINIALSLRERLFDKPFYR FT LVYGDSDLLPGLVVDRFGDVLVVQLASAAMELRKDEVLAALLQVLKPAAVLWKNDSSAR FT DAEGLERYVANAYGEVPEWVALEENGVKFEAPVLAGQKTGWFYDHRMNRARLAPYVQGK FT RVLDLFSYIGGWGIQAAAFGASEVMCVDASAFALDGVERNAALNGVAEKVACVEGDVFE FT ALRELKAADERFDVVIADPPAFIKRKKDLKNGEAAYRRLNEQAMRLLSKDGILVSASCS FT MHLPEDDLQNILIGSARHLDRNIQLLERGGQGPDHPVHLAIAETRYIKSLTCRLLPNG* FT " FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_process: peptidyl-glutamine methylation [goid FT GO:0018364] [evidence IEA]; FT " FT gene complement(399493..400032) FT /locus_tag="PA0355" FT /name="pfpI" FT CDS complement(399493..400032) FT /db_xref="GI:15595552" FT /function="Translation, post-translational modification, FT degradation" FT /protein_id="NP_249046" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="protease PfpI" FT /translation="MTQSLHGKVVAALVTDGFEQVELTGPKKALEDAGATVRILSDKAG FT EVRGWNHHQPAEAFRVDGTFEDASLDDYDALLLPGGVINSDQIRSLAKAQELAIRAEQA FT SKPVAVICHGAWLLISAGLVQGRTLTSWPSLKDDINNAGGHWVDQEVAVDGKLVSSRKP FT EDIPAFNRRFIEILAG*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: cellular protein metabolic process FT [goid GO:0044267] [evidence ISS]; FT GO_function: cysteine-type peptidase activity [goid FT GO:0008234] [evidence IEA]; FT " FT gene 400248..401072 FT /locus_tag="PA0356" FT CDS 400248..401072 FT /db_xref="GI:15595553" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249047" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="VPPQPQIMVDLQMEQVMPNPDLKNIARLISQDPGLSGALLKLVNS FT PFFGLANRITSIQRAVNLLGSRSVINLINAQSIKGEMSDDTIVTLNRFWDTAQDVAMSC FT LSLAKRIGYESVDEAYALGLFHNCGIPLMLKRFPHYMAVLEEAYAAASDERRVVDTENR FT VLNTNHAVVGYYTARSWRLPEHVCEAIANHHNALSIFGDESARDTQLKNLLAILKMAEH FT ICGSHRVLGNQPEDHEWNSIGALVLDYVGLTDYDFENLKGSILELGVGQGSY*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 401131..401943 FT /locus_tag="PA0357" FT /gene_synonym="fpg" FT /name="mutM" FT CDS 401131..401943 FT /db_xref="GI:15595554" FT /function="DNA replication, recombination, modification FT and repair" FT /protein_id="NP_249048" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="formamidopyrimidine-DNA glycosylase" FT /translation="MPELPEVETTRRGIAPYLEGQRVERVIVRERRLRWPIPEDLDVRL FT SGQRIVSVERRAKYLLLGAEAGTLISHLGMSGSLRLVESGTPASRHEHVDIELASGMAL FT RYTDPRRFGAMLWSLAPLEHELLRNLGPEPLTDAFAGQRLFELSRGRSMAVKPFIMDNA FT VVVGVGNIYASEALFAAGIDPRKPAGSISKARYLRLAEEIKRILAIAIERGGTTLRDFV FT GGDGQPGYFQQELFVYGRGGEFCKVCGSTLREIRLGQRASVYCPRCQR*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: DNA metabolic process [goid GO:0006259] FT [evidence ISS]; FT GO_function: oxidized purine base lesion DNA N-glycosylase FT activity [goid GO:0008534] [evidence IEA]; FT " FT gene 402020..402598 FT /locus_tag="PA0358" FT CDS 402020..402598 FT /db_xref="GI:15595555" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249049" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MSGNYLPRNTLVESLGHAMLKLSGWKIEGQLPALDKFVVIGAHHT FT SNWDFVAFLAAKFVLRLNARWFGKHTLFNGPLGGLMRRWGGIPIQRHLKLNTVDQAIQA FT FREHREFMLIIAPEGTRKKVDRWRMGFYHIARGAGVPVVPAALDYENRRIVIGEPFWPT FT GNEDADLCSLIGFYRPFIPKKPHYAFLGD*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 402681..403025 FT /locus_tag="PA0359" FT CDS 402681..403025 FT /db_xref="GI:15595556" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249050" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="hypothetical protein" FT /translation="MNLFRTTALVLALTTGLSSMPALADAVQENASGDPMYTVEAPPAY FT AMIGDLLIARPFLIAATAVGAVAFVVSLPFTAASGSVGKAGQALVVDPGKEAFVRCLGC FT TTSGYNHDES*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene 403295..404281 FT /locus_tag="PA0360" FT CDS 403295..404281 FT /db_xref="GI:15595557" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249051" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MFSQWVFLSVLALAVPSFAWAEDAVSDLAREQSKAEQGDKRGDEL FT FAEFTRLRQAAETGEPQALFDFGAYFYQQQNYASAREWWGKAAAAGMVRAQIQLAMLYR FT DGDGGPQDKTEAARWFRKAAEQGDAAAQNEMGVLYWRGEGVDQDRVKAGTWFERAAASG FT SEDAETNLGWFYLDDSQGVYSATSDEEAALLDRYAGSREKAFQWFCKAATQGDARAQFK FT VGEAYWNGSGAGMNKLQARLWLEKAAQQQDADAIAWLESAANAAWYTRLENWIHAALDG FT ELSGVADCSGAADRRHSGRGMEGAPSDPEAVEASAEDAQQAVEAASQ*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(404386..406119) FT /locus_tag="PA0361" FT CDS complement(404386..406119) FT /db_xref="GI:15595558" FT /function="Amino acid biosynthesis and metabolism" FT /protein_id="NP_249052" FT /localization_and_confidence="Periplasmic, Class 2 FT (primary); Periplasmic, Class 3 (primary)" FT /product="probable gamma-glutamyltranspeptidase precursor" FT /translation="MSFLNLPVRTLVAACGLSLLSLAAHADSFRGDAHAPQQAAVATPH FT PAATVAGLETLANGGNAFDAAAAIAAALAVAEPYGSGLGGGGFFLLRQAGAQPTYRFLD FT ARERAPKAAYADMYRRNGKVDPRLSVDGPLAAAIPGLPAALVELSSRYGRKPLADNLVP FT AIRLAVDGVSVDRIYRDRAAMRLEAMRKDPETARIFLDKGGIPDEWNLLRQPQLARTLE FT RLGRYGRIGFYEGETADKLLTGVRAGGGIWSAADLRDYRVIERRPLEVKLANGRELISA FT PPPSAGGVALAQSLQMLEQLPWQKAEPVQRAHYVLEVLRRAYRDRGLLGDPDFVANPLP FT SLLAPDYLKRLAAGIDPRRATPSSALPEAPAWREGDHTTHFAVIDAQGNAVAATLSVNL FT PFGAAFTVPDTGVVLNNEMDDFAADTQGANSYGLAGSQANAVAAGKRPLSSMSPSFLES FT PTDFAAFGTPGGSRIPSMVLISMLQYFDGRPVGQWVAAPRYHHQYKPDVVEYEPRAFSD FT AEAAELRRRGYQLKRLERSYGNQQVLYWDKRSGRVDAASDPRGIGYSSLSLEAQAQPRP FT H*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_process: glutathione biosynthetic process [goid FT GO:0006750] [evidence IEA]; FT " FT gene complement(406247..406498) FT /locus_tag="PA0362" FT /name="fdx1" FT CDS complement(406247..406498) FT /db_xref="GI:15595559" FT /function="Energy metabolism" FT /protein_id="NP_249053" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="ferredoxin [4Fe-4S]" FT /translation="MSLKITDDCINCDVCEPECPNGAISQGEEIYVIDPNLCTECVGHY FT DEPQCQQVCPVDCIPLDDANVESKDQLMEKYRKITGKA*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT /note="GO_process: generation of precursor metabolites and FT energy [goid GO:0006091] [evidence ISS]; FT GO_function: electron carrier activity [goid GO:0009055] FT [evidence RCA]; FT GO_process: oxidation reduction [goid GO:0055114] FT [evidence IEA]; FT " FT gene complement(406619..407098) FT /locus_tag="PA0363" FT /gene_synonym="kdtB" FT /name="coaD" FT CDS complement(406619..407098) FT /function="Central intermediary metabolism" FT /product_synonym="PPAT" FT /protein_id="NP_249054" FT /note="GO_process: metabolic process [goid GO:0008152] FT [evidence ISS]; FT GO_process: coenzyme A biosynthetic process [goid FT GO:0015937] [evidence IEA]; FT " FT /db_xref="GI:15595560" FT /localization_and_confidence="Cytoplasmic, Class 1 FT (primary); Cytoplasmic, Class 3 (primary)" FT /product="phosphopantetheine adenylyltransferase" FT /translation="MNRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLF FT SLEQRVALAQEVTKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANM FT NRQLAPDVESMFLTPSEKYSFISSTLVREIAALGGDISKFVHPAVADALAERFKR*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene complement(407250..408845) FT /locus_tag="PA0364" FT CDS complement(407250..408845) FT /db_xref="GI:15595561" FT /function="Putative enzymes" FT /protein_id="NP_249055" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="probable oxidoreductase" FT /translation="MPVPDLFAEGLARGWKTYNGSRLDDDLELEADVVVVGTGAGGGTT FT AEILSAAGLKVLLVEEGPLKTSSDFKMQEADAYPELYQEGIGRMSKDGAITILQGRAVG FT GTTLINWTSSFRTPEPTLQHWAQVYGVKGHSAEDMAPWFEKMEQRLHVAPWALPPNANN FT DVIRLGCEKLGYHWKVIPRNVLGCWNLGYCGMGCPVNAKQSMLVTTIPATLDKGGELLY FT LARANRLLLDGDKVTGLECLGMDERCVAPNGRRIRVRARHYVLSGGGINTPAILLRSKA FT PDPSQRVGKRTFLHTVNFSAGLFDRVINPFYGAPQSIYSDHFQWDDGVTGRMSYKLEVP FT PLQPSLASVLLGGFGSDNALRMEQLPHTNMMLALLRDGFHPDSAEGSVGLRGDDTPVLD FT YRMTDYTWDGIRRAFHTMAEIQFAAGAREVRPVHSDARSAKNLQEARGIIDGLRLEIYR FT TRLGSAHVMGGCAMGEDPAVAVADSLGRHHHLRNLSIHDGSLFPTSIGANPQLSVYGLT FT AQLASALAERLARA*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene complement(408901..409449) FT /locus_tag="PA0365" FT CDS complement(408901..409449) FT /db_xref="GI:15595562" FT /function="Membrane proteins" FT /protein_id="NP_249056" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 3 (primary)" FT /product="hypothetical protein" FT /translation="MSDTTLESAGLSRRSLMKVGLIGGAFLATAGVTASLTGCSAEKPA FT SGLEKVRESDLPFLRALLPVMLLGAVSAEQMPKAVEGAIQSLDHNLARLSPEMFKLTQQ FT LFDVLALPLTRGPLTGIWGSWENASGDDVRAFLSRWENSFIGLLRMGHSSLMQLAMMAW FT YARPEAWAHCGYPGPPKIA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(409504..410934) FT /locus_tag="PA0366" FT CDS complement(409504..410934) FT /db_xref="GI:15595563" FT /function="Putative enzymes" FT /protein_id="NP_249057" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable aldehyde dehydrogenase" FT /translation="MVADIAYLQQSQQEINQLEALFARQRAAYLAQPMPDATQRVQWLK FT ALRDLLFKEQQALIEAIDRDFSARSADETLLAEIMPSLHGIHYAAKRVKKWMKPARRAV FT GLQFQPASAQVVYQPLGVVGVIVPWNYPLFLSIGPLTGALAAGNRVMIKMSESTPATGR FT LLKDLLARIFPEDQVAVVLGEVDVGVAFSKLPFDHLLFTGATSVGKHVMRAAAENLTPV FT TLELGGKSPAIVSDSVPMKDAAERIAFGKSLNAGQTCVAPDYVLVPSRRVEEFVSQYKE FT VVQGFFPRLSDNPDYTAIINERQLGRLRGYLDDAREKGATLVPLFAEGQQRRLPQTLLL FT NVSDDMKVMQEEIFGPLLPVIPYERLEDALAYVNQRPRPLALYYFGYDKAQQQRVLHET FT HSGGVCLNDTLLHVAQDDIPFGGVGPSGMGHYHGHEGFLTFSKAKGVFSKPRFNAARMI FT YPPYGKSIQKLVYKLFVR*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_function: oxidoreductase activity, acting on the FT aldehyde or oxo group of donors, NAD or NADP as acceptor FT [goid GO:0016620] [evidence IEA]; FT " FT gene 411224..411871 FT /locus_tag="PA0367" FT CDS 411224..411871 FT /db_xref="GI:15595564" FT /function="Transcriptional regulators" FT /protein_id="NP_249058" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="probable transcriptional regulator" FT /translation="MAPRIKTRDRIAQASLELFNAQGERSVTTNHIATHLGISPGNLYY FT HYPNKQAIIAELFAEYESHVESFLRLPEGRGLTVDDKTFYLEALLAAMWRYRFLHRDLE FT HLLESDPELAARYRAFAQRCLVNAKAIYRGFTEAGILRMNETQLEALTLNAWIILTSWV FT RFLCTTLDLDGDLSEAQLRRGIYQVLALESGHIEAQAQDAVDGISERLYVPL*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT gene complement(412329..413327) FT /locus_tag="PA0368" FT CDS complement(412329..413327) FT /db_xref="GI:15595565" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249059" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="conserved hypothetical protein" FT /translation="MTASPTFQPAWWLPNPHLQTLWSPFFRRGPTLERQRERLWLADGD FT FIDLDWAGPHDAETPLVLALHGLTGSSSSHYILGLQRALLERGWASVALNWRGCSGEPN FT RLPRGYHSGVSDDLAEVVAHLRARRPQAPLYAVGYSLGGNVLLKYLGETAGDCPLLGGV FT AVSVPFRLDECADRIGLGFSRVYQAHFMKAMLAYVQDKQRLFGEQGQAEGLAALQRLGP FT LEGMRTFWDFDGRVTAPLHGFADARDYYRRASSRYYLPDIRTPSLIIHSSDDPFVFARS FT LPDRSELAPCTELELHARGGHVGFVDGSPRQPTYYLERRIPDWLEARLRQH*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(413364..413654) FT /locus_tag="PA0369" FT CDS complement(413364..413654) FT /db_xref="GI:15595566" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249060" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="hypothetical protein" FT /translation="VADQGADPFILETGSGRILFDLHGGRGWDPAPCFDDLWQMAASLA FT CFGEVWSGAGEDILLDDCSVAPRYRQQLVDELQPILGSRQRAEDLADEFGW*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT gene complement(413933..414529) FT /locus_tag="PA0370" FT /gene_synonym="yhhF" FT CDS complement(413933..414529) FT /db_xref="GI:15595567" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249061" FT /localization_and_confidence="Unknown, Class 3 (primary)" FT /product="conserved hypothetical protein" FT /translation="MSKPTAKAPGRHGGQGQLRIIGGEWRSRRFVFPDGPGLRPTPDRV FT RETLFNWLAPYVEGARVLDPFAGSGALFLEALSRGAREGLALDTNGEAVAALRNHLDAL FT KCGTAQLVLGDAVRYLGNQAPSAFDLVFLDPPFHQNLLQDACRLLETRGWLNPDAWIYT FT ESESVPSSLGLPGNWRLHREKKAGNVHYALWQRGA*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_process: rRNA methylation [goid GO:0031167] FT [evidence IEA]; FT " FT gene complement(414529..416016) FT /locus_tag="PA0371" FT CDS complement(414529..416016) FT /db_xref="GI:15595568" FT /function="Hypothetical, unclassified, unknown" FT /protein_id="NP_249062" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Outer Membrane Vesicle, Class 1 (secondary); FT Unknown, Class 3 (primary); Unknown (This protein may have FT multiple localization sites), Class 3 (primary)" FT /product="hypothetical protein" FT /translation="MSERTGLRYGLLGLIVIALLAALAYFVARPPQTPAAAHAAAVEEN FT QLQSLKDVAKQAPVHRKLDIQEWKTAEGAKVLFVEAHELPMFDLRLTFAAGSSQDAGTP FT GLSMLTNAMLNEGVPGKDTTAIAAGFEDLGASFSNGSYRDMAVAGLRSLSEADKRTQAL FT KLFEQVIGQPTFPEDALARIKNQVLAGFEYQKQNPGKLAGLELFKRLYGEHPYAHSSDG FT DEKSVPTISREQLQAFHKKAYAAGNVVIALVGDLSRQEAEAIAAEVSKALPQGPALAKT FT VQPETPKPGLTHIDFPSEQTHLMLAQLGIDRQDPDYAALYLGNQILGGGGFGTRLMDQV FT REKRGLTYGIYSGFTAMQARGPFMINFQTRAELSEGALKLVQDIVRDYLANGPTQKELD FT DAKRELAGSFPLSTASNADIVGQLGAIGFYGLPLDYLESFLKQVEGLSVEQVRTAMAKH FT LDADAFVIVSAGPSVPQKPLPPPTAKPAQQPSGVPEH*" FT /product_name_confidence="Product name confidence: Class FT 4:Homologs of previously reported genes of unknown FT function, or no similarity to any previously reported FT sequences." FT /note="GO_process: pyrroloquinoline quinone biosynthetic FT process [goid GO:0018189] [evidence IEA]; FT " FT gene complement(416009..417406) FT /locus_tag="PA0372" FT CDS complement(416009..417406) FT /db_xref="GI:15595569" FT /function="Putative enzymes" FT /protein_id="NP_249063" FT /localization_and_confidence="Periplasmic, Class 1 FT (primary); Outer Membrane Vesicle, Class 1 (secondary); FT Periplasmic, Class 3 (primary)" FT /product="probable zinc protease" FT /translation="VAARKVQITMKTPARRRVGLLLASLCLPLFAQAAETQPTHEFSLD FT NGLKVIVREDHRAPVVVSQLWYRIGSSYETPGLTGLSHALEHMMFKGSRKLGPGEASRV FT LRDLGAEENAFTTDDYTAYYQVLARDRLPVALEMEADRMAHLSLPVDQFKSEIEVIKEE FT RRLRTDDNPNALAFERFKAAAYPASGYHTPTIGWMADLQRMTIDDLRHWYESWYAPNNA FT TLVVVGDVTADEVKTLAKRYFGEIPWRQLPPARKPLELAEPGERRLKLYVRTQLPNLIM FT GFNVPSLGSSENPREVNALRLIGALLDGGYSARLASRLERGEELVAGASTYYDAFNRGD FT SLFVLSATPNVQKGKTLEQVEAGLWKQLDDLKQNPPSAAEIERVRAQMIAGMVYEKDSI FT AAQASSIGQLESVGLSWKLIDQDLEALKAVTPDDIQKAARTYFTPSRLTLAQVLPVKAE FT EKEARHE*" FT /product_name_confidence="Product name confidence: Class FT 3: Function proposed based on presence of conserved amino FT acid motif, structural feature or limited sequence FT similarity to an experimentally studied gene" FT /note="GO_process: pyrroloquinoline quinone biosynthetic FT process [goid GO:0018189] [evidence IEA]; FT " FT gene 417527..418894 FT /locus_tag="PA0373" FT /name="ftsY" FT CDS 417527..418894 FT /function="Protein secretion/export apparatus" FT /product_synonym="cell division protein FtsY" FT /protein_id="NP_249064" FT /note="GO_process: secretion [goid GO:0046903] [evidence FT ISS]; FT GO_process: protein secretion [goid GO:0009306] [evidence FT IEA]; FT " FT /db_xref="GI:15595570" FT /localization_and_confidence="Cytoplasmic, Class 3 FT (primary)" FT /product="signal recognition particle receptor FtsY" FT /translation="MFGSNDDKKAPQGGEKKGLFGWWRKKPQAGEQPADQPVEPVSETA FT AAEQRAPADDVAQSLTEQPGRQQPSAAEPAEPPAPVAEAPLAGDEPASAEEHSPRPEAP FT VAQPEPILAAEPEPEPEPEPEPEPEPVAPLAAAPAVSEPATRPGFFARLRQGLSKTSAS FT IGEGMASLFLGRKEIDDDLLDDIETRLLTADVGVEATTLIVQNLTKRVARKELADSGAL FT YKALQEELASLLRPVEQPLQVDVAREPYVILVVGVNGVGKTTTIGKLAKKLQLEGKKVM FT LAAGDTFRAAAVEQLQVWGERNRIPVIAQHTGADSASVIFDAVQAAKARGIDVLIADTA FT GRLHTKDNLMEELKKVRRVIGKLDETAPHEVLLVLDAGTGQNAINQAKQFNLAVELTGL FT ALTKLDGTAKGGVIFALAKQFGLPIRYIGVGEGIDDLRTFEADAFVQALFAERENA*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT known). " FT gene 418891..419562 FT /locus_tag="PA0374" FT /name="ftsE" FT CDS 418891..419562 FT /db_xref="GI:15595571" FT /function="Transport of small molecules; Cell division" FT /protein_id="NP_249065" FT /localization_and_confidence="Cytoplasmic Membrane, Class FT 2 (primary); Cytoplasmic Membrane, Class 3 (primary)" FT /product="cell division protein FtsE" FT /translation="MIRFEQVGKRYPNGHVGLHEVSFRVHRGEILFVTGHSGAGKSTLL FT RLILAMERPTSGKLLLGGQDLGRITTAQIPFLRRQIGVVFQNHQLLTDRTVADNIALPL FT QILGMPKPEIAKRVASALERVNLKEKGEALPSDLSTGQQQRVGIARAIVHQPALLLADE FT PTGNLDPRLASEIMGVFEDINRLGTTVLIASHDLALIARMRHRMLTLQRGRIIADREDE FT A*" FT /product_name_confidence="Product name confidence: Class FT 2: Function of highly similar gene experimentally FT demonstrated in another organism (and gene context FT consistent in terms of pathways its involved in, if FT