Strain Refseq Accession (Replicon) Replicon Name Locus Tag Feature Type Start Stop Strand Gene Name Product Name Product Name Rating Refseq Accession GI Entrez Alternate Gene Name(s) Alternate Product Names Comments References Genomic Context Homology Structure Features Pathways EC Number PseudoCAP Function Class Subcellular Localization (Localization[Localization Confidence] Gene Ontology Mappings(NameSpace|Accession|Term|Evidence Code) TIGRFAM Predictions Using HMMER (Accession|Name|Function|IsologyType|Significance|EC Number|Role|Sub-role) PFAM Predictions (Accession|Name|Start|Stop|E-value) COG Predictions (Accession|Name[Category])DNA Sequence Protein Sequence Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0001 CDS 483 2027 + dnaA chromosomal replication initiator protein DnaA Class 2 NP_064721.1 15595199 PMID:90160310 ; PMID:83116961 ; PMID:90117642 ; PMID:84237568 ; PMID:6296774 ; PMID:6234204 ; PMID:2558436 ; PMID:2106132 b3699-b3706 (Ecoli) 74% similar to DnaA protein [Escherichia coli] PS01008: DnaA protein signature DNA replication, recombination, modification and repair Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0006259|DNA metabolic process|ISS ; biological_process|GO:0006270|DNA replication initiation|IEA ; biological_process|GO:0006275|regulation of DNA replication|IEA ; molecular_function|GO:0003677|DNA binding|IEA ; molecular_function|GO:0003688|DNA replication origin binding|IEA ; molecular_function|GO:0005524|ATP binding|IEA TIGR00362|DnaA|chromosomal replication initiator protein DnaA|equivalog|1.3e-281||DNA metabolism|DNA replication, recombination, and repair PF08299|Bac_DnaA_C, Bacterial dnaA protein helix-turn-helix domain|422|491|2e-30 COG0593| DnaA, ATPase involved in DNA replication initiation [DNA replication, recombination, and repair]. ; COG0593|DnaA, ATPase involved in DNA replication initiation [DNA replication, recombination, and repair]. ; COG0593|DnaA, ATPase involved in DNA replication initiation [DNA replication, recombination, and repair]. GTGTCCGTGGAACTTTGGCAGCAGTGCGTGGATCTTCTCCGCGATGAGCTGCCGTCCCAACAATTCAACACCTGGATCCGTCCCTTGCAGGTCGAAGCCGAAGGCGACGAATTGCGTGTGTATGCACCCAACCGTTTCGTCCTCGATTGGGTGAACGAGAAATACCTCGGTCGGCTTCTGGAACTGCTCGGTGAACGCGGCGAGGGTCAGTTGCCCGCGCTTTCCTTATTAATAGGCAGCAAGCGTAGCCGTACGCCGCGCGCCGCCATCGTCCCATCGCAGACCCACGTGGCTCCCCCGCCTCCGGTTGCTCCGCCGCCGGCGCCAGTGCAGCCGGTATCGGCCGCGCCCGTGGTAGTGCCACGTGAAGAGCTGCCGCCAGTGACGACGGCTCCCAGCGTGTCGAGCGATCCCTACGAGCCGGAAGAACCCAGCATCGATCCGCTGGCCGCCGCCATGCCGGCTGGAGCAGCGCCTGCGGTGCGCACCGAGCGCAACGTCCAGGTCGAAGGTGCGCTGAAGCACACCAGCTATCTCAACCGTACCTTCACCTTCGAGAACTTCGTCGAGGGCAAGTCCAACCAGTTGGCCCGCGCCGCCGCCTGGCAGGTGGCGGACAACCTCAAGCACGGCTACAACCCGCTGTTCCTCTACGGTGGCGTCGGTCTGGGCAAGACCCACCTGATGCATGCGGTGGGCAACCACCTGCTGAAGAAGAACCCGAACGCCAAGGTGGTCTACCTGCATTCGGAACGTTTCGTCGCGGACATGGTGAAGGCCTTGCAGCTCAACGCCATCAACGAATTCAAGCGCTTCTACCGCTCGGTGGACGCACTGTTGATCGACGACATCCAGTTCTTCGCCCGTAAGGAGCGCTCCCAGGAGGAGTTCTTCCACACCTTCAATGCCCTTCTCGAAGGCGGCCAGCAGGTGATCCTCACCAGCGACCGCTATCCGAAGGAAATCGAAGGCCTGGAAGAGCGGCTGAAATCCCGCTTCGGCTGGGGCCTGACGGTGGCCGTCGAGCCGCCGGAACTGGAAACCCGGGTGGCGATCCTGATGAAGAAGGCCGAGCAGGCGAAGATCGAGCTGCCGCACGATGCGGCCTTCTTCATCGCCCAGCGCATCCGTTCCAACGTGCGTGAACTGGAAGGTGCGCTGAAGCGGGTGATCGCCCACTCGCACTTCATGGGCCGGCCGATCACCATCGAGCTGATTCGCGAGTCGCTGAAGGACCTGTTGGCCCTTCAGGACAAGCTGGTCAGCATCGACAACATCCAGCGCACCGTCGCCGAGTACTACAAGATCAAGATATCCGATCTGTTGTCCAAGCGGCGTTCGCGCTCGGTGGCGCGCCCGCGCCAGGTGGCCATGGCGCTCTCCAAGGAGCTGACCAACCACAGCCTGCCGGAGATCGGCGTGGCCTTCGGCGGTCGGGATCACACCACGGTGTTGCACGCCTGTCGTAAGATCGCTCAACTTAGGGAATCCGACGCGGATATCCGCGAGGACTACAAGAACCTGCTGCGTACCCTGACAACCTGA MSVELWQQCVDLLRDELPSQQFNTWIRPLQVEAEGDELRVYAPNRFVLDWVNEKYLGRLLELLGERGEGQLPALSLLIGSKRSRTPRAAIVPSQTHVAPPPPVAPPPAPVQPVSAAPVVVPREELPPVTTAPSVSSDPYEPEEPSIDPLAAAMPAGAAPAVRTERNVQVEGALKHTSYLNRTFTFENFVEGKSNQLARAAAWQVADNLKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHTFNALLEGGQQVILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKAEQAKIELPHDAAFFIAQRIRSNVRELEGALKRVIAHSHFMGRPITIELIRESLKDLLALQDKLVSIDNIQRTVAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGVAFGGRDHTTVLHACRKIAQLRESDADIREDYKNLLRTLTT Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0002 CDS 2056 3159 + dnaN DNA polymerase III, beta chain Class 2 NP_064722.1 15595200 PMID:84237568 ; PMID:92257585 ; PMID:82060252 ; PMID:6458041 ; PMID:6234204 ; PMID:1349852 b3699-b3706 (Ecoli) 92% similar to dnaN gene product of [P. putida] ; 71% similar to DNA polymerase III beta-subunit [Escherichia coli] PF00712: DNA polymerase III beta subunit Pyrimidine metabolism [PseudoCAP] ; Purine metabolism [PseudoCAP] 2.7.7.7 DNA replication, recombination, modification and repair Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0006259|DNA metabolic process|ISS ; biological_process|GO:0006260|DNA replication|IEA ; cellular_component|GO:0009360|DNA polymerase III complex|IEA ; molecular_function|GO:0003887|DNA-directed DNA polymerase activity|IEA TIGR00663|dnan|DNA polymerase III, beta subunit|equivalog|1.4e-116|2.7.7.7|DNA metabolism|DNA replication, recombination, and repair PF02767|DNA_pol3_beta_2, DNA polymerase III beta subunit, central domain|130|244|1e-40 COG0592| DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) [DNA replication, recombination, and repair]. ; COG0592|DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) [DNA replication, recombination, and repair]. ; COG0592|DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) [DNA replication, recombination, and repair]. ATGCATTTCACCATTCAACGCGAAGCCCTGTTGAAACCGCTGCAACTGGTCGCCGGCGTCGTGGAACGCCGCCAGACATTGCCGGTTCTCTCCAACGTCCTGCTGGTGGTCGAAGGCCAGCAACTGTCGCTGACCGGCACCGACCTCGAAGTCGAGCTGGTTGGTCGCGTGGTACTGGAAGATGCCGCCGAACCCGGCGAGATCACCGTACCGGCGCGCAAGCTGATGGACATCTGCAAGAGCCTGCCGAACGACGTGCTGATCGACATCCGTGTCGAAGAGCAGAAACTTCTGGTGAAGGCCGGGCGTAGCCGCTTCACCCTGTCCACCCTGCCGGCCAACGATTTCCCCACCGTAGAGGAAGGTCCCGGCTCGCTGAACTTCAGCATTGCCCAGAGCAAGCTGCGTCGCCTGATCGACCGCACCAGCTTCGCCATGGCCCAGCAGGACGTGCGTTACTACCTCAACGGCATGCTGCTGGAAGTGAACGGCGGCACCCTGCGCTCCGTCGCCACCGACGGCCACCGACTGGCCATGTGCTCGCTGGATGCGCAGATCCCGTCGCAGGACCGCCACCAGGTGATCGTGCCGCGCAAAGGCATCCTCGAACTGGCTCGTCTGCTCACCGAGCAGGACGGCGAAGTCGGCATCGTCCTGGGCCAGCACCATATCCGTGCCACCACTGGCGAATTCACCTTCACTTCGAAGCTGGTGGACGGCAAGTTCCCGGACTACGAGCGTGTACTGCCGCGCGGTGGCGACAAGCTGGTGGTCGGTGACCGCCAGCAACTGCGCGAAGCCTTCAGCCGTACCGCGATCCTCTCCAACGAGAAGTACCGCGGCATTCGCCTGCAGCTTTCCAACGGTTTGCTGAAAATCCAGGCGAACAACCCGGAGCAGGAAGAGGCCGAGGAAGAAGTGCAGGTCGAGTACAACGGCGGCAACCTGGAGATAGGCTTCAACGTCAGTTACCTGCTCGACGTGCTGGGTGTGATCGGTACCGAGCAGGTCCGCTTCATCCTTTCCGATTCCAACAGCAGCGCCCTGGTCCACGAGGCCGACAATGACGATTCTGCCTATGTCGTCATGCCGATGCGCCTCTAA MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVVLEDAAEPGEITVPARKLMDICKSLPNDVLIDIRVEEQKLLVKAGRSRFTLSTLPANDFPTVEEGPGSLNFSIAQSKLRRLIDRTSFAMAQQDVRYYLNGMLLEVNGGTLRSVATDGHRLAMCSLDAQIPSQDRHQVIVPRKGILELARLLTEQDGEVGIVLGQHHIRATTGEFTFTSKLVDGKFPDYERVLPRGGDKLVVGDRQQLREAFSRTAILSNEKYRGIRLQLSNGLLKIQANNPEQEEAEEEVQVEYNGGNLEIGFNVSYLLDVLGVIGTEQVRFILSDSNSSALVHEADNDDSAYVVMPMRL Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0003 CDS 3169 4278 + recF RecF protein Class 2 NP_064723.1 15595201 PMID:92178981 ; PMID:89218947 ; PMID:2540413 ; PMID:1542576 b3699-b3706 (Ecoli) 59% similar to RecF protein [Escherichia coli] ; 90% similar to RecF protein [Pseudomonas putida] PS00617: RecF protein signature 1 DNA replication, recombination, modification and repair Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0006259|DNA metabolic process|ISS ; biological_process|GO:0006260|DNA replication|IEA ; biological_process|GO:0006281|DNA repair|IEA ; biological_process|GO:0006310|DNA recombination|IEA ; biological_process|GO:0009432|SOS response|IEA ; molecular_function|GO:0003697|single-stranded DNA binding|IEA ; molecular_function|GO:0005524|ATP binding|IEA TIGR00611|recf|DNA replication and repair protein RecF|subfamily|1.5e-139||DNA metabolism|DNA replication, recombination, and repair PF02463|SMC_N, RecF/RecN/SMC N terminal domain|3|158|2e-21 COG1195| RecF, Recombinational DNA repair ATPase (RecF pathway) [DNA replication, recombination, and repair]. ; COG1195|RecF, Recombinational DNA repair ATPase (RecF pathway) [DNA replication, recombination, and repair]. ; COG1195|RecF, Recombinational DNA repair ATPase (RecF pathway) [DNA replication, recombination, and repair]. ATGTCCCTGACCCGCGTTTCGGTCACCGCGGTGCGCAACCTGCACCCGGTGACCCTCTCCCCCTCCCCCCGCATCAACATCCTCTACGGCGACAACGGCAGCGGCAAGACCAGCGTGCTCGAAGCCATCCACCTGCTGGGCCTGGCGCGTTCATTCCGCAGTGCGCGCTTGCAGCCGGTGATCCAGTATGAGGAAGCGGCCTGCACCGTATTCGGCCAGGTGATGTTGGCCAACGGCATCGCCAGCAACCTGGGGATTTCCCGTGAGCGCCAGGGCGAGTTCACCATCCGCATCGATGGGCAGAACGCCCGGAGTGCGGCTCAATTGGCGGAAACTCTCCCACTGCAACTGATCAACCCGGACAGCTTTCGGTTGCTCGAGGGAGCGCCGAAGATCCGGCGACAGTTCCTCGATTGGGGAGTGTTCCACGTGGAACCTCGGTTTCTGCCCGTCTGGCAGCGCCTGCAGAAGGCGCTGCGCCAGCGGAACTCCTGGCTCCGGCATGGTAAACTGGACCCCGCGTCGCAAGCGGCCTGGGACCGGGAATTGAGCCTGGCCAGCGATGAGATCGATGCCTACCGCAGAAGCTATATCCAGGCGTTGAAACCGGTATTCGAGGAAACACTCGCCGAATTGGTTTCACTGGATGACCTGACCCTTAGCTACTACCGAGGCTGGGACAAGGACCGGGACCTCCTGGAGGTTCTGGCTTCCAGCCTGTTGCGCGACCAGCAGATGGGCCACACCCAGGCGGGACCGCAGCGTGCGGATCTTCGCATACGGTTGGCAGGTCATAACGCCGCGGAGATTCTCTCGCGCGGTCAGCAGAAGCTGGTGGTATGCGCCCTGCGCATCGCCCAAGGCCATCTGATCAATCGCGCCAAGCGCGGACAGTGCGTCTACCTGGTGGACGACCTGCCCTCGGAACTGGATGAGCAGCATCGAATGGCTCTTTGCCGCTTGCTTGAAGATTTGGGTTGCCAGGTATTCATCACCTGCGTGGACCCGCAACTATTGAAAGACGGCTGGCGCACGGATACGCCGGTATCCATGTTCCACGTGGAACATGGAAAAGTCTCTCAGACCACGACCATCGGGAGTGAAGCATGA MSLTRVSVTAVRNLHPVTLSPSPRINILYGDNGSGKTSVLEAIHLLGLARSFRSARLQPVIQYEEAACTVFGQVMLANGIASNLGISRERQGEFTIRIDGQNARSAAQLAETLPLQLINPDSFRLLEGAPKIRRQFLDWGVFHVEPRFLPVWQRLQKALRQRNSWLRHGKLDPASQAAWDRELSLASDEIDAYRRSYIQALKPVFEETLAELVSLDDLTLSYYRGWDKDRDLLEVLASSLLRDQQMGHTQAGPQRADLRIRLAGHNAAEILSRGQQKLVVCALRIAQGHLINRAKRGQCVYLVDDLPSELDEQHRMALCRLLEDLGCQVFITCVDPQLLKDGWRTDTPVSMFHVEHGKVSQTTTIGSEA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0004 CDS 4275 6695 + gyrB DNA gyrase subunit B Class 2 NP_064724.1 15595202 PMID:95314243 ; PMID:89218947 ; PMID:99087756 ; PMID:2540413 ; PMID:7793912 ; PMID:9869566 b3699-b3706 (Ecoli) 82% similar to gyrB gene product [E. coli] ; 92% similar to DNA gyrase [Pseudomonas putida] PS00177: DNA topoisomerase II signature 5.99.1.3 DNA replication, recombination, modification and repair Unknown[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0006259|DNA metabolic process|ISS ; biological_process|GO:0006265|DNA topological change|IEA ; cellular_component|GO:0009330|DNA topoisomerase complex (ATP-hydrolyzing)|IEA ; molecular_function|GO:0003918|DNA topoisomerase (ATP-hydrolyzing) activity|IEA TIGR01059|gyrB|DNA gyrase, B subunit|equivalog|0|5.99.1.3|DNA metabolism|DNA replication, recombination, and repair PF02518|HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase|34|142|6e-16 COG0187| GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair]. ; COG0187|GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair]. ; COG0187|GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair]. ATGAGCGAGAACAACACGTACGACTCTTCCAGCATCAAGGTGCTGAAGGGGCTGGATGCCGTACGCAAGCGCCCCGGCATGTACATCGGCGACACCGACGATGGCACCGGTCTGCACCACATGGTGTTCGAGGTGGTGGATAACTCCATCGACGAAGCGCTGGCCGGTTACTGCAGCGAAATCAGCATCACCATCCATACGGATGAGTCGATCACTGTCCGCGACAATGGACGCGGTATTCCGGTGGATATCCACAAGGAAGAAGGGGTTTCTGCGGCGGAAGTGATCATGACCGTCCTCCACGCCGGCGGCAAGTTCGACGACAACACCTACAAGGTGTCCGGCGGCTTGCACGGTGTGGGCGTCTCGGTGGTGAACGCGCTGTCCCATGAACTACGCCTGACCATCCGTCGCCACAACAAGGTCTGGGAACAGGTCTACCACCACGGCGTTCCGCAGTTCCCACTGCGCGAAGTGGGCGAGACCGATGGCTCCGGCACCGAAGTTCACTTCAAGCCGTCCCCGGAGACCTTCAGCAACATCCACTTCAGTTGGGACATCCTGGCCAAGCGCATCCGCGAGCTGTCCTTCCTCAACTCCGGCGTCGGCATCCTGCTGCGCGACGAGCGTACCGGCAAGGAGGAGCTGTTCAAGTACGAAGGCGGTCTGAAGGCCTTCGTCGAGTACCTGAACACCAACAAGACCGCGGTGAACGAGGTATTCCACTTCAACGTCCAGCGTGAAGAGGACGGCGTGGGTGTGGAAGTCGCCTTGCAGTGGAACGACAGCTTCAACGAGAACCTGCTCTGCTTCACCAACAACATCCCGCAGCGTGACGGCGGCACCCACCTGGCCGGTTTCCGTTCGGCGCTGACGCGTAACCTGAACAACTACATCGAGGCCGAAGGCCTGGCGAAGAAGTTCAAGATCGCCACCACCGGCGACGATGCCCGCGAAGGCCTCACCGCGATCATCTCGGTGAAGGTACCGGACCCGAAGTTCAGCTCGCAGACCAAGGACAAGCTGGTCTCCTCCGAGGTGAAGACTGCGGTGGAACAGGAGATGGGCAAGTACTTCGCCGACTTCCTGCTGGAGAATCCCAACGAAGCCAAGGCCGTGGTCGGCAAGATGATCGACGCCGCCCGTGCCCGCGAGGCCGCGCGCAAGGCGCGCGAGATGACCCGCCGCAAGGGCGCGCTGGACATCGCCGGCCTGCCCGGCAAACTGGCCGATTGCCAGGAAAAGGACCCGGCGCTCTCCGAACTGTACATCGTGGAGGGTGACTCCGCGGGCGGTTCCGCCAAGCAGGGCCGCAATCGCCGGACCCAGGCGATCCTGCCGCTCAAGGGCAAGATCCTCAACGTCGAAAAGGCGCGCTTCGACAAGATGCTCTCCTCCCAGGAGGTCGGTACGCTGATCACCGCCCTGGGCTGTGGCATCGGCCGCGAGGAATACAACATCGACAAGCTGCGCTACCACAACATCATCATCATGACCGATGCTGACGTCGACGGTTCGCACATCCGCACCCTGCTGTTGACCTTCTTCTTCCGCCAGATGCCCGAGCTGATCGAGCGTGGCTACATCTACATCGCCCAGCCCCCGTTGTACAAGGTCAAGCGCGGCAAGCAGGAGCAGTACATCAAGGACGACCAGGCCATGGAAGAGTACATGACCCAGTCGGCCCTGGAAGACGCCAGCCTGCACGTCAACGAGCACGCTCCGGGCCTGTCCGGGGCGGCGCTGGAGAAACTGGTCAACGAGTATCGCGGGGTGATCGCCACCCTCAAGCGCCTGTCGCGCCTGTACCCCCAGGAGCTGACCGAGCACTTCATCTACCTGCCTACCGTGTCGGTGGACGACCTGGCTAACGAGTCGGCCATGCAGGGCTGGTTGGAGAAGTTCCAGGCGCGCCTGACCGCCGCCGAGAAGTCCGGCCTGACCTACAAGGCCAGCCTGCGCGAAGACCGCGAGCGCCACCTGTGGCTGCCCGAGGTGGAACTGGTGGCCCACGGCCTGTCCAGCTACGTCACCTTCAACCGTGACTTCTTCGCCAGCAATGACTACCGCTCGGTGTCGCTGCTCGGCGACCAGCTGAACAGCCTGCTGGAAGACGGCGCCTACGTGCAGAAGGGTGAGCGCAAGCGCCCGATCAGCGCCTTCAAGGACGGCCTGGACTGGCTGATGGCCGAAGGTACCAAGCGCCACAGCATCCAGCGATACAAGGGGCTGGGCGAGATGAACCCTGAGCAGCTGTGGGAAACCACCATGGATCCGAACGTCCGGCGCATGCTCAAGGTGACCATCGAGGATGCCATCGCCGCCGACCAGATCTTCAACACCCTGATGGGCGATGCCGTGGAGCCGCGCCGCGACTTCATCGAAAGCAACGCGCTGGCGGTGTCGAACCTGGACGTGTGA MSENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSNIHFSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVNEVFHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEAEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKRGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLSRLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISAFKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNTLMGDAVEPRRDFIESNALAVSNLDV Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0005 CDS 7018 7791 - lptA lysophosphatidic acid acyltransferase, LptA Class 1 NP_064725.1 15595203 plsC PMID:97445095 ; PMID:16079332 ; PMID:15687295 ; PMID:9299423 56% similar to putative 1-acyl-sn-glycerol-3-phosphate acyltransferase [Rickettsia prowazekii] ; 44% similar to 1-acyl-sn-glycerol-3-phosphate acyltransferase [Mus musculus] ; 28% identity with PlsC [Escherichia coli] ; 36% identity with NlaB [Nesseria meningitidis] 1 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius phospholipid biosynthesis [PseudoCAP] ; phospholipid biosynthesis [PseudoCyc] 2.3.1.51 Fatty acid and phospholipid metabolism Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0044255|cellular lipid metabolic process|ISS TIGR00530|AGP_acyltrn|1-acylglycerol-3-phosphate O-acyltransferases|subfamily_domain|1.9e-21|2.3.1.51|Fatty acid and phospholipid metabolism|Biosynthesis PF01553|Acyltransferase, Acyltransferase|64|186|7e-23 COG0204| PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]. ; COG0204|PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]. ; COG0204|PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]. ATGTCGACAGTGCAGGCCATCAGAACCGTCCTCTTTTACCTGCTGCTGTCCGCCAGCGCGTTCGTCTGGGGCACCCTCAGCTTCTTCATCGCGCCGATCCTGCCGTTCCGCGCCCGCTACCGCTTCGTGGTACAGAACTGGTGCCGCTTCGCGATCTGGCTGACCCGCGTGGTCGCCGGCATCCGCTACGAGGTGCGCGGACTGGAGAACATCCCGGAAAAGCCCTGCGTGATCCTCTCCAAGCACCAGAGCACCTGGGAAACCTTCTTCCTCTCCGGCTTCTTCGAGCCACTCAGCCAGGTACTCAAGCGCGAGCTGCTCTACGTGCCGTTCTTCGGCTGGGCCCTGGCCCTGCTCAAGCCCATCGCCATCGACCGCAGCCAGCCCAAGCTGGCCCTCAAGCAACTGGCCAAGCAGGGCGACGAGTGCCTGAAGAAAGGCGCCTGGGTGCTGATCTTCCCGGAAGGCACGCGTATTCCGGTGGGGCAGATGGGCAAGTTCTCCCGCGGCGGCACCGCCCTGGCGGTCAACGCCGGGCTACCGGTACTGCCGATCGCCCACAACGCCGGGCAGTATTGGCCCAAGGCCGGCTGGGCCAAGTACCCGGGCACCATCCAGGTGGTGATCGGCCCGGCCATGCACGCCGAAGGCGAAGGCCCGCGCGCCATCGCCGAGCTAAACCAGCGCGCCGAAGCCTGGGTCAGCGAGACCATGGCCGAGATCAGCCCCATCCAGCAGCGGGTCAGCCATCCGGAGCCGTCGGTGGTCTCGTGA MSTVQAIRTVLFYLLLSASAFVWGTLSFFIAPILPFRARYRFVVQNWCRFAIWLTRVVAGIRYEVRGLENIPEKPCVILSKHQSTWETFFLSGFFEPLSQVLKRELLYVPFFGWALALLKPIAIDRSQPKLALKQLAKQGDECLKKGAWVLIFPEGTRIPVGQMGKFSRGGTALAVNAGLPVLPIAHNAGQYWPKAGWAKYPGTIQVVIGPAMHAEGEGPRAIAELNQRAEAWVSETMAEISPIQQRVSHPEPSVVS Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0006 CDS 7803 8339 - conserved hypothetical protein Class 4 NP_064726.1 15595204 yaeD 56% similar to putative phosphatase YaeD [Escherichia coli] Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] TIGR01656|Histidinol-ppas|histidinol-phosphate phosphatase family domain|subfamily_domain|6.2e-55||No Data|No Data PF00702|Hydrolase, haloacid dehalogenase-like hydrolase|7|149|1e-08 COG0241| HisB, Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]. ; COG0241|HisB, Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]. ; COG0241|HisB, Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]. ATGTCCCGTTCCCTGCTGATTCTCGACCGCGATGGAGTCATCAACCTCGACTCCGACGATTACATCAAGACCCTCGACGAGTGGATCCCCATCCCCAGCTCGATCGAGGCCATCGCCCGCCTGAGCCAGGCCGGCTGGACCGTCGCGGTGGCTACCAACCAGTCCGGCATCGCCCGTGGCTATTACGACCTGGCAGTGCTCGAGGCCATGCATGCGCGCTTGCGCGAACTGGTCGCGGAGCAGGGCGGCGAGGTCGGCCTCATCGTCTATTGTCCGCATGGACCGGACGACGGTTGCGACTGCCGCAAGCCGAAGCCGGGTATGCTGCGGCAGATCGGCGAGCACTACGGGGTCGATCTGTCGGGTATCTGGTTCGTCGGCGACAGCATCGGTGACCTGGAGGCGGCGCGGGCCGTCGATTGTCAGCCGGTATTGGTAAAGACCGGAAAAGGTGTACGTACGCTGGGCAAGCCCTTGCCAGAGGGCACCCTGATATTCGACGATCTGGCGGCAGTCGCCAGCGCATTACTTCAGTAA MSRSLLILDRDGVINLDSDDYIKTLDEWIPIPSSIEAIARLSQAGWTVAVATNQSGIARGYYDLAVLEAMHARLRELVAEQGGEVGLIVYCPHGPDDGCDCRKPKPGMLRQIGEHYGVDLSGIWFVGDSIGDLEAARAVDCQPVLVKTGKGVRTLGKPLPEGTLIFDDLAAVASALLQ Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0007 CDS 8671 10377 + hypothetical protein Class 4 NP_064727.1 15595205 PMID:15687295 type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 26) ; type I export signal computationally predicted by Phobius (cleavage after residue 26) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 26) Membrane proteins Periplasmic[Class 3] ; Unknown (This protein may have multiple localization sites)[Class 3] GTGAAACGCCTGAAAAAGACACTGCACCTTTCAAGCTTGTCCCTCGCTTCCCTGGCTCTTTCTTCCGCCGCCCTGGCGGCCGCTCCGGTCATGCTCGACCAGGGCAAGGAATGGACCGAAAGCCACCGCCAGGACTTCTACAGCCGCGACCAGGGCTCGCAGGTGATGCCCCTGCCCTGGCTCAAGGCGTTGCGACAGCCGGATGGAACGCCTTTCCTCGCCGACAGCCTGGCCCGCTACGGCTATTTGCCCAACCCCAAGGCGCCCGCGGAAGGCCTGCCGGTGGGCTTCACCGTAGCCGGCACGGGCGCCCGGCAGATGGTCGGCATGACCTGTTCGGCCTGCCATACCCGGCAGATCGAGGTGAAGGGCACTGCCTATCGGATCGACGGCGGTCCGGCGATCGTCGACTTCCAGGCATTCCTCGCCGACCTCGATCGGGCCGTGGGACCGCTGACCAGCGATGACGCCGCCTTCGACGCCTTCGCCAAGCCGATCCTCGGGGCCAATCCGCCTCCCGGTGCGCGCGACGCTCTGCTCGCGGCGGTGAAGGAATGGTACGAGCCCTATCACACGCTGATCGAGCGCGCGCTGCCCAAGGACACCTGGGGACCGGCGCGGCTGGACGCGGTATCGATGATCTTCAACCGCCTTACCGGGCTGGATATCGGCACCGCGCCGCCCTACCTGATTCCCGACAACATCAAGGCGGCCGATGCGCCGGTGCGCTATCCGTTCCTGTGGAACGCGGCGCGGCAGAACAAGACCCAGTGGCCCGGCTTCGCCGCCAACGGCAACGACCTGCTCGGCCTGGCGCGCAATGTCGGCGAGGTCTACGGGGTGTTCGCCACCTTCCACCCGCAGAAGAGCAAGTTCCACCTGCTGGGCATGGACTACCTGAAGATCAACTCGGCCAACTTCCACGGGCTGGGCAAGCTGGAAGACCTGATCAAGAAGATCGGCCCGCCGAAGTGGCCCTGGGCGGTGGACAAGCACCTGGCCAGGAAAGGCGCGCTGATCTTCGCCCGCAAGACCGACGAAGGTGGCTGCGTGGAGTGCCACGGCATCCGGATCAAGGACCTGGTGCTTTGGGACACTCCGCTGAGGGACGTCGGCAGCGACAGCCGCCAGCACGCCATCCTCGATGGCCAGGTGCAGACCGGCGTGATGGAGGGCGCGCGGATGCCGTTCGGCCAGCCGCTGAAGGCGACCGACGGAGCCTTCGATGTACTCGCCGTAGCGGTGGCCGGTTCGATCCTGCAGCACTTCGTGCCGATCCTCGGTGAGAAGCACGATGCCAAGGCGGCGGCGGTCAAGCCGGAAAGCGTGATGACCGACGAAACCCGGCAACTGCTGACCGCCTTCCAGAAGCCGGTGCGTACCCAGGCCGACCCCTACCCCTACGAGTCGCGGGTCCTGCAGGGGATCTGGGCAGCGGCGCCGTACCTGCACAACGGCTCGGTGCCGACCCTGGAAGAGTTGCTGAAGCCGGCCGCGGAGCGGGTGGAATCCTTCCCGGTGGGCTCGGCCTACGACGTGGACAAGGTCGGCCTCGCCGCCCAGCAGACCCAATTCGGCAGCTATGTGCTGAAGACCACCGGCTGCGAGCAGCGTGATTCCGGCAACAGCCGCTGCGGCCATGAGTACGGCACCAGCCTGTCGGCCGAGGAGAAGCGTGCGCTGCTGGAGTATCTGAAGGTCCTGTAG MKRLKKTLHLSSLSLASLALSSAALAAAPVMLDQGKEWTESHRQDFYSRDQGSQVMPLPWLKALRQPDGTPFLADSLARYGYLPNPKAPAEGLPVGFTVAGTGARQMVGMTCSACHTRQIEVKGTAYRIDGGPAIVDFQAFLADLDRAVGPLTSDDAAFDAFAKPILGANPPPGARDALLAAVKEWYEPYHTLIERALPKDTWGPARLDAVSMIFNRLTGLDIGTAPPYLIPDNIKAADAPVRYPFLWNAARQNKTQWPGFAANGNDLLGLARNVGEVYGVFATFHPQKSKFHLLGMDYLKINSANFHGLGKLEDLIKKIGPPKWPWAVDKHLARKGALIFARKTDEGGCVECHGIRIKDLVLWDTPLRDVGSDSRQHAILDGQVQTGVMEGARMPFGQPLKATDGAFDVLAVAVAGSILQHFVPILGEKHDAKAAAVKPESVMTDETRQLLTAFQKPVRTQADPYPYESRVLQGIWAAAPYLHNGSVPTLEELLKPAAERVESFPVGSAYDVDKVGLAAQQTQFGSYVLKTTGCEQRDSGNSRCGHEYGTSLSAEEKRALLEYLKVL Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0008 CDS 10434 12488 - glyS glycyl-tRNA synthetase beta chain Class 2 NP_064728.1 15595206 PMID:83030764 ; PMID:83290996 ; PMID:6290471 ; PMID:6309809 glyQS (Ecoli) 64% similar to glycyl-tRNA synthetase beta subunit [Escherichia coli] Glycine, serine and threonine metabolism [PseudoCAP] ; Aminoacyl-tRNA biosynthesis [PseudoCAP] ; tRNA charging pathway [PseudoCyc] 6.1.1.14 Amino acid biosynthesis and metabolism ; Translation, post-translational modification, degradation Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0006426|glycyl-tRNA aminoacylation|IEA ; biological_process|GO:0006520|amino acid metabolic process|ISS ; biological_process|GO:0044267|cellular protein metabolic process|ISS ; cellular_component|GO:0009345|glycine-tRNA ligase complex|IEA ; molecular_function|GO:0004820|glycine-tRNA ligase activity|IEA TIGR00211|glyS|glycyl-tRNA synthetase, beta subunit|equivalog_domain|3.9e-238|6.1.1.14|Protein synthesis|tRNA aminoacylation PF05746|DALR_1, DALR anticodon binding domain|577|671|2e-06 COG0751| GlyS, Glycyl-tRNA synthetase, beta subunit [Translation, ribosomal structure and biogenesis]. ; COG0751|GlyS, Glycyl-tRNA synthetase, beta subunit [Translation, ribosomal structure and biogenesis]. ; COG0751|GlyS, Glycyl-tRNA synthetase, beta subunit [Translation, ribosomal structure and biogenesis]. ATGAGCGCCAAGGATTTCCTGGTCGAACTGGGCACCGAAGAGCTGCCGCCAAAAGCCCTCAACAGCCTCGGCGAAGCCTTCCTCAGCGGTATCGAGAAGGGCCTCAAGGCTGCCGGTCTGAGCTATGCCGCTGCGCGTTTCTATGCGGCGCCGCGCCGTCTCGCCGTGCTGGTCGAGCAACTCGCCGTGCAGCAGCCCGACCGTACCGTCAACCTAGACGGTCCGCCGCTACAGGCCGCCTTCGACGCCAGCGGTAACCCGACCCAGGCCGCCCTGGGCTTCGCCAAGAAGTGCGGCGTGGATCTGCAGCAGATCGACAAGAGCGGTCCGAAGCTGCGCTTCATCCAGACCATCGCCGGCCAACCGGCCGCCGGCCTGCTGCCGGGCATCGTCGAGGCCTCGTTGAACGAACTGCCGATTCCCAAGCGGATGCGCTGGGCAGCTCGCCGCGAGGAGTTCGTGCGTCCGACCCAATGGCTGGTGATGCTGTTCGGCGACGATGTGGTCGAGTGCGAGATCCTCGCCCAGAAAGCCGGGCGCGAATCCCGTGGCCACCGCTTCCACAATCCGGACAATGTGCGTATTTCCAGCCCGGCAGCGTATCTGGAAGACCTGCGCGGCGCTCATGTGCTGGCCGATTTCGCCGAGCGCCGCGAGCTGATCGCCAAGCGCGTGGCCGAACTGGCCGCCGAGCAACAGGGCAGCGCCATCGTGCCGCCGAGCCTGCTCGACGAAGTGACTGCACTGGTCGAGTGGCCGGTGCCGCTGGTCTGCTCCTTCGAGGAGCGCTTCCTCGAGGTCCCGCAGGAAGCCCTGATCACCACCATGCAGGACAACCAGAAATACTTCTGCCTGCTGGACGCCAACGGCAAGCTGCTGCCTCGCTTCATCACCGTCGCCAACGTCGAGAGCAAGGCGCCGGAGAACATCGTCAGCGGTAACGAGAAGGTGGTTCGCCCGCGCCTCACCGACGCCGAGTTCTTCTTCAAGCAGGACAAGAAGCAGCCGCTCGAAAGCTTCAATGAGCGCCTGCGCAACGTAGTGTTCCAGGCCCAGCTCGGCACCGTGTTCGAGAAGGCCCAGCGCGTCTCCGGCCTGGCCGCCTACATCGCCGAACGTATAGGCGGCAATGCGCAGAACGCCTCGCGCGCCGGCATCCTGTCCAAGTGTGACCTGGCGACCGAGATGGTCGGCGAGTTCCCCGAAATGCAGGGCATCGCCGGCTACTACTACGCCACCCACGGCGGCGAAGCGGAAGACGTCGCCCTGGCCCTCAACGAGCAGTACATGCCGCGCGGCGCCGGCGCCGAGCTACCCTCGACCCTGACCGGCGCCGCCGTGGCGGTGGCCGACAAGCTCGATACCCTGGTCGGTATCTTCGGCATCGGCATGCTTCCCACCGGCAGCAAGGACCCCTACGCGCTGCGCCGCGCTGCGCTGGGCGTGCTGCGCATCCTCATCGAGAAGCAGCTCGACCTGGACCTGGTAGCCGCGGTCAACGCCGCCGTCGAGCAATACGGCGACAAGGTCAAGGCCGCCGGCCTGGCCGAGCAGGTGCTGGACTTCGTGTTCGACCGCCTGCGCGCGCGCTACGAGGACGAAGGCGTGGACGTGGCCGTGTACCAGTCGGTGCGCGCGCTCAAGCCAAGCTCGCCGCTGGACTTCGACCAGCGCGTACAGGCCGTCCAGGCCTTCCGCCAGTTGCCTGAAGCCGAGGCCCTGGCCGCGGCGAACAAACGGGTGTCGAATATTCTCGCCAAGTCCGAGGACGAGGTTCCGCCGAACGTGGATGCCAGCCTGCTGGTGGAAGCCGCCGAGAAGGCCCTGGGCAGCGCCGTGGCGAACGCCGAAAGCGAAGTCGCGCCGCTGGCAGCGGCACGCGACTATCGCGCCGCGCTGGCCCGCCTGGCGGCCTTGCGCGAGCCGGTGGATACGTTCTTCGCCGATGTGATGGTCAATGTCGACGACGCGGCGGTGCGCGCCAACCGCTATGCGCTGCTGGCCAAGCTGCGCGGGTCGTTCCTCGGGGTGGCGGACATCTCGCTGCTCGGCTGA MSAKDFLVELGTEELPPKALNSLGEAFLSGIEKGLKAAGLSYAAARFYAAPRRLAVLVEQLAVQQPDRTVNLDGPPLQAAFDASGNPTQAALGFAKKCGVDLQQIDKSGPKLRFIQTIAGQPAAGLLPGIVEASLNELPIPKRMRWAARREEFVRPTQWLVMLFGDDVVECEILAQKAGRESRGHRFHNPDNVRISSPAAYLEDLRGAHVLADFAERRELIAKRVAELAAEQQGSAIVPPSLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDANGKLLPRFITVANVESKAPENIVSGNEKVVRPRLTDAEFFFKQDKKQPLESFNERLRNVVFQAQLGTVFEKAQRVSGLAAYIAERIGGNAQNASRAGILSKCDLATEMVGEFPEMQGIAGYYYATHGGEAEDVALALNEQYMPRGAGAELPSTLTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLVAAVNAAVEQYGDKVKAAGLAEQVLDFVFDRLRARYEDEGVDVAVYQSVRALKPSSPLDFDQRVQAVQAFRQLPEAEALAAANKRVSNILAKSEDEVPPNVDASLLVEAAEKALGSAVANAESEVAPLAAARDYRAALARLAALREPVDTFFADVMVNVDDAAVRANRYALLAKLRGSFLGVADISLLG Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0009 CDS 12488 13435 - glyQ glycyl-tRNA synthetase alpha chain Class 2 NP_064729.1 15595207 PMID:83030764 ; PMID:83290996 ; PMID:6290471 ; PMID:6309809 glyQS (Ecoli) 86% similar to glycine-tRNA synthetase, alpha subunit [Escherichia coli] Glycine, serine and threonine metabolism [PseudoCAP] ; Aminoacyl-tRNA biosynthesis [PseudoCAP] ; tRNA charging pathway [PseudoCyc] 6.1.1.14 Amino acid biosynthesis and metabolism ; Translation, post-translational modification, degradation Cytoplasmic[Class 2] ; Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0006426|glycyl-tRNA aminoacylation|IEA ; biological_process|GO:0006520|amino acid metabolic process|ISS ; biological_process|GO:0044267|cellular protein metabolic process|ISS ; cellular_component|GO:0009345|glycine-tRNA ligase complex|IEA ; molecular_function|GO:0004820|glycine-tRNA ligase activity|IEA TIGR00388|glyQ|glycyl-tRNA synthetase, alpha subunit|equivalog_domain|7.8e-169|6.1.1.14|Protein synthesis|tRNA aminoacylation PF02091|tRNA-synt_2e, Glycyl-tRNA synthetase alpha subunit|11|298|1e-162 COG0752| GlyQ, Glycyl-tRNA synthetase, alpha subunit [Translation, ribosomal structure and biogenesis]. ; COG0752|GlyQ, Glycyl-tRNA synthetase, alpha subunit [Translation, ribosomal structure and biogenesis]. ; COG0752|GlyQ, Glycyl-tRNA synthetase, alpha subunit [Translation, ribosomal structure and biogenesis]. GTGAGCCAGACTACGCCCGCCGTGCGCACCTTCCAAGACCTGATTCTCGCCCTGCAGAACTACTGGGCAGAGCAGGGCTGCGTGGTGCTGCAGCCCTACGACATGGAAGTGGGCGCCGGCACCTTCCACACCGCCACCTTCCTCCGCGCCATCGGCCCGGAGACCTGGAACGCCGCCTACGTCCAGCCGAGCCGCCGCCCCACCGACGGTCGCTACGGCGAGAACCCCAACCGCCTGCAGCACTACTACCAGTTTCAGGTGGTCCTGAAGCCGAACCCGGAGAACTTCCAGGAGCTGTACCTCGGCTCGCTGAAAGCCATCGGCATCGACCCGCTGGTCCACGACATCCGCTTCGTCGAGGACAACTGGGAGTCGCCGACCCTCGGCGCCTGGGGCCTGGGTTGGGAAATCTGGCTGAACGGCATGGAAGTCACCCAGTTCACCTACTTCCAGCAGGTCGGCGGCATCGAGTGCTATCCGGTCACCGGCGAGATCACCTACGGCCTGGAGCGCCTGGCCATGTACCTGCAGGGCGTGGACTCGGTCTACGACCTGGTCTGGACCGACGGCCCGTTCGGCAAGGTCACCTATGGCGACGTGTTCCACCAGAACGAGGTGGAGCAATCCACTTTCAACTTCGAGCACGCCAACGTGCCGAAGCTGTTCGAACTGTTCGACTTCTACGAAAGCGAAGCCAACCGCCTGATCGCGCTGGAGCTGCCGTTGCCGACCTACGAGATGGTCCTCAAGGCTTCGCATACCTTCAACCTGCTGGATGCGCGGCGCGCCATCTCGGTCACCGAGCGCCAGCGCTACATCCTTCGCGTGCGTACCCTGGCCCGCGCCGTGGCGCAGAGCTACCTGCAGGCCCGCGCGCGCCTCGGCTTCCCCATGGCCACCCCCGAATTGCGTGACGAAGTACTGGCCAAGCTGAAGGAGGCCGAATGA MSQTTPAVRTFQDLILALQNYWAEQGCVVLQPYDMEVGAGTFHTATFLRAIGPETWNAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVLKPNPENFQELYLGSLKAIGIDPLVHDIRFVEDNWESPTLGAWGLGWEIWLNGMEVTQFTYFQQVGGIECYPVTGEITYGLERLAMYLQGVDSVYDLVWTDGPFGKVTYGDVFHQNEVEQSTFNFEHANVPKLFELFDFYESEANRLIALELPLPTYEMVLKASHTFNLLDARRAISVTERQRYILRVRTLARAVAQSYLQARARLGFPMATPELRDEVLAKLKEAE Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0010 CDS 13540 14091 + tag DNA-3-methyladenine glycosidase I Class 2 NP_248700.1 15595208 PMID:86232617 ; PMID:87057218 ; PMID:97096907 ; PMID:15687295 ; PMID:3520491 ; PMID:3536912 ; PMID:8941728 66% similar to 3-methyladenine-DNA glycosylase I (tag) [E. coli] ; 88% similar to tag gene product [Pseudomonas fluorescens] 0 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius 3.2.2.20 DNA replication, recombination, modification and repair Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0006259|DNA metabolic process|ISS ; biological_process|GO:0006281|DNA repair|IEA ; molecular_function|GO:0008725|DNA-3-methyladenine glycosylase I activity|IEA TIGR00624|tag|DNA-3-methyladenine glycosylase I|subfamily|1.8e-130|3.2.2.20|DNA metabolism|DNA replication, recombination, and repair PF03352|Adenine_glyco, Methyladenine glycosylase|6|180|1e-88 COG2818| Tag, 3-methyladenine DNA glycosylase [DNA replication, recombination, and repair]. ; COG2818|Tag, 3-methyladenine DNA glycosylase [DNA replication, recombination, and repair]. ; COG2818|Tag, 3-methyladenine DNA glycosylase [DNA replication, recombination, and repair]. ATGCCACGCTGCTTCTGGTGCAACGACGATCCCCTCTACATGGCCTACCACGATGAGGAGTGGGGTGTGCCGCAGCGCGATCCCGACGCGCTGTTCGAACTTCTGCTGCTGGAGGGCTTCCAGGCCGGATTGTCCTGGATCACCGTGCTGAAGAAGCGCGAGCGCTACCGCGAGGTGCTGTTCGGCTTCGACGTGCAGCGGGTGGCACAGATGAGCGACGCGGAGATCGACGAACTGATGCTCGACCCCGGCATCATTCGCAATCGGGCCAAGCTCAACGCTGCGCGGCAGAACGCCCAGGCCTGGCTGGAGCTGGACGACCCGGCTGGGTTCCTCTGGTCCTTCGTCGGCGGCCAGCCGAAGATCAACCATTTCGCCGGTCGCGCCGAGGTGCCGGCGATTACCCCGGAAGCCGAGGCCATGAGCAAGGCGCTGCGCAAGGCCGGCTTCAACTTCGTCGGGCCGACCATCTGCTACGCCTTCATGCAGGCCAGCGGCATGGTCATGGACCATACCCAGGACTGCGACCGTTACGCCCAACTCGTCGGCTAG MPRCFWCNDDPLYMAYHDEEWGVPQRDPDALFELLLLEGFQAGLSWITVLKKRERYREVLFGFDVQRVAQMSDAEIDELMLDPGIIRNRAKLNAARQNAQAWLELDDPAGFLWSFVGGQPKINHFAGRAEVPAITPEAEAMSKALRKAGFNFVGPTICYAFMQASGMVMDHTQDCDRYAQLVG Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0011 CDS 14235 15122 + probable 2-OH-lauroyltransferase Class 3 NP_248701.1 15595209 PMID:90368739 ; PMID:95050264 ; PMID:91266954 ; PMID:2203778 ; PMID:1904818 ; PMID:7961456 88% similar to htrB gene product [Pseudomonas fluorescens] ; 45% similar to HtrB protein [Escherichia coli] Lipopolysaccharide biosynthesis [PseudoCAP] 2.3.1.- Cell wall / LPS / capsule Cytoplasmic Membrane[Class 2] ; Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0009245|lipid A biosynthetic process|IEA ; molecular_function|GO:0008415|acyltransferase activity|IEA TIGR02207|lipid_A_htrB|lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase|subfamily|2.4e-15|2.3.1.-|Cell envelope|Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides PF03279|Lip_A_acyltrans, Bacterial lipid A biosynthesis acyltransferase|8|285|6e-40 COG1560| HtrB, Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane]. ; COG1560|HtrB, Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane]. ; COG1560|HtrB, Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane]. GTGGAGAAATTCAAAGGTGCCCTGGTGGTGGGGGCCCTACGCCTGTTCGCGTTATTGCCCTGGCGTGCCGTGCAAGGCGTCGGGGCCGGCATAGGCTGGCTGATGTGGAAATTGCCGAATCGATCCCGCGAGGTAGTGCGGATCAACCTGTCCAAGTGCTTCCCCGAGTTGTCTGAAACCGAACTGGAAAAGCTGGTCGGACAAAGCCTGATGGATATTGGCCGGACCCTCACCGAAAGTGCCTGCGCCTGGATCTGGCCGCCTGAAAAGTCGCTGAGATACATCCGCGAGGTCGAAGGCATGGAGGTGCTGGAGGAAGCGCTGGCTTCCGGCGATGGCCTGGTCGGCATTACCAGTCACCTGGGAAACTGGGAAGTACTCAACCACTTCTATTGCTCCTACGCCAAGCCGATCATCTTCTATCGTCCGCCCAAGCTGAAGGCAGTGGACGAGTTGCTGAAGAAGCAACGCGTGCAATTGGGCAATCGCGTCGCACCTTCCACTCCGGAGGGTATCCTCAGTGTCATCAAGGAAGTGAAGAAAGGCGGTTGCGTAGGGATTCCCGCCGACCCCGAGCCCGCGCGTACCGCTGGGCTCTTCGTGCCCTACCTGGGCACCACTGCATTGATCAGCAAGTTCGTCCCGCAGTTGCTTTCACGCGGCAAGGCGCGTGGAGTGTTCTTCCATGCGGTGCGCCTGCCCGATGGTAGCGGTTACAAGGTGATCCTCGAAGCGGCTCCGGCGGACATGTACGACAAGGACCTGGAAGTGTCTGTAGCAGCCATGAGCCGCGAGTTGGCGAAGTATGTACGAGCCTATCCCAGCCAGTACATGTGGAGCATGAAGCGCTTCAAGAACCGCCCGGATGGCGAGAAAAAATGGTATTGA MEKFKGALVVGALRLFALLPWRAVQGVGAGIGWLMWKLPNRSREVVRINLSKCFPELSETELEKLVGQSLMDIGRTLTESACAWIWPPEKSLRYIREVEGMEVLEEALASGDGLVGITSHLGNWEVLNHFYCSYAKPIIFYRPPKLKAVDELLKKQRVQLGNRVAPSTPEGILSVIKEVKKGGCVGIPADPEPARTAGLFVPYLGTTALISKFVPQLLSRGKARGVFFHAVRLPDGSGYKVILEAAPADMYDKDLEVSVAAMSRELAKYVRAYPSQYMWSMKRFKNRPDGEKKWY Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0012 CDS 15207 15473 + hypothetical protein Class 4 NP_248702.1 15595210 Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Unknown[Class 3] PF07238|PilZ, PilZ domain|3|85|6e-07 ATGGATAATCAACGACAATACCCACGAACCCCGCTCAAGTGCCGAATCCGTATCAGTCACCCGTTATTTGGCGAGCTGATGGCGCAGACACGCGACCTCTCCGACACCGGGGTCTATGTCAAACACCCGGATCTGACCCAGCTCCCAACAGGCAGTGTCGTTACTGGCCAGGTACAGGATCTGCCGATCGACGCGCCGATCCTGCAGATGGAAGTCGTGCGAGTCGATGCGGAAGGCGTCGGCCTGCGCTTTCTCAGCGAAGCCTGA MDNQRQYPRTPLKCRIRISHPLFGELMAQTRDLSDTGVYVKHPDLTQLPTGSVVTGQVQDLPIDAPILQMEVVRVDAEGVGLRFLSEA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0013 CDS 15620 16273 + conserved hypothetical protein Class 4 NP_248703.1 15595211 yhhQ PMID:15687295 77% similar to hypothetical protein YhhQ [Escherichia coli] 6 predicted transmembrane helices ; 6 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Membrane proteins Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] TIGR00697|TIGR00697|conserved hypothetical integral membrane protein|subfamily|5.3e-50||Hypothetical proteins|Conserved PF02592|DUF165, Uncharacterized ACR, YhhQ family COG1738|43|186|5e-29 COG1738| COG1738, Uncharacterized conserved protein [Function unknown]. ; COG1738|COG1738, Uncharacterized conserved protein [Function unknown]. ; COG1738|COG1738, Uncharacterized conserved protein [Function unknown]. ATGTCAGCCTCTTCTCCGGCGGCCTGGCGCGGCACCCTGGCCGGCCTGATCGCCTTCCACATCTTCATCATCATCGCCAGCAACTACCTGGTGCAGTTGCCGATCACCCTGTTTGGCTGGCACACCACCTGGGGCGCCTTCAGCTTTCCGTTCATCTTCCTGGCTACCGACCTCACCGTGCGCTTGCTGGGCAAGGGCCCTGCCCGGCTGGTCATCGCCCGGGTCATGATCCCGGCGTTGATCGCCTCCTACGTGGTCTCGGTGTTGTTCCAGGAAGCGGCGTTCCGTGGTTTCTCCGCGCTGCTGGAGTTCAACACCTTCGTCGCACGGATATCCCTGGCAAGCTTCCTCGCCTATGTGCTCGGGCAGATCCTCGACATCCAGGTATTCGACCGCCTCCGTCGTTCCCGGCACTGGTGGACCGCGCCAGTCGCCTCGACCATCCTCGGCAACCTGCTGGACACCTTCACCTTCTTCTTCGTGGCGTTCTGGCGTAGCGACAATCCGTTCATGGCGCAGCACTGGGTGGAAATCGCCACGGTGGACTACGGAGTGAAGCTGAGTATCAGCCTTCTGCTGTTCGTGCCGCTCTACGGCATGCTACTCAACGGCATCCTGAAGATGCTGCCGGGGCGGCCGCAGAGCAACGCTTGA MSASSPAAWRGTLAGLIAFHIFIIIASNYLVQLPITLFGWHTTWGAFSFPFIFLATDLTVRLLGKGPARLVIARVMIPALIASYVVSVLFQEAAFRGFSALLEFNTFVARISLASFLAYVLGQILDIQVFDRLRRSRHWWTAPVASTILGNLLDTFTFFFVAFWRSDNPFMAQHWVEIATVDYGVKLSISLLLFVPLYGMLLNGILKMLPGRPQSNA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0014 CDS 16335 16607 - hypothetical protein Class 4 NP_248704.1 15595212 Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] ATGTCGAAGCAAGAGCGTTCAGTCCCGTCCTATGTCGAATACCCATACGAGCAAGCGATTCTCTACGTTCACCGGAACGCCTCCGCCAATGAGATGCTCGAATCCGTACAGGAGCGCCTCAGGGCTCTCCTCGGCCTCCTCCATGCCTTGGAAAGGATCGAAGTGCGGACAGGGCTGGGCGTTCCCATTCAGCGCGTGGCGCACATCCTGGTCACGCTCGGCGGCGATGCCCTGACGCTGCTCACGGCCGCGCACCGGGCTACCACCTCCTGA MSKQERSVPSYVEYPYEQAILYVHRNASANEMLESVQERLRALLGLLHALERIEVRTGLGVPIQRVAHILVTLGGDALTLLTAAHRATTS Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0015 CDS 16900 17217 - hypothetical protein Class 4 NP_248705.1 15595213 46% similar to putative protein [Aquifex aeolicus] Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] COG4783| COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only]. ; COG4783|COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only]. ; COG4783|COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only]. ATGATGATCGAAGGTCTGGAAAAGATGCTGGCCAAAGGCGTGGACAATGCGCTGCTGCGCTTCGGCCTGGGCAAGGGCTACCTGGACGCGGGCGACGCCGAACGCGCGGCGGAACACCTCCAGCGCTGCGTAGAGCAGGACCCGAAGTATTCCGCCGGCTGGAAGCTGCTGGGCAAGGCGCGCCAGGCTGCCGGCGATCTCGCGGGCGCCCGGCAGGCCTGGGAGCAGGGCCTGGCAACTGCCGCGACGCATGGCGACAAGCAGGCCGAAAAGGAAATGACGGTGTTCCTGCGCAAGCTCGACAGGGCGAGAACCTGA MMIEGLEKMLAKGVDNALLRFGLGKGYLDAGDAERAAEHLQRCVEQDPKYSAGWKLLGKARQAAGDLAGARQAWEQGLATAATHGDKQAEKEMTVFLRKLDRART Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0016 CDS 17366 18739 - trkA potassium uptake protein TrkA Class 2 NP_248706.1 15595214 PMID:95035102 ; PMID:7948029 b3287-b3290 (Ecoli) 79% similar to TrkA protein of the constitutive K+ -transport system Trk [Escherichia coli] ; 79% similar to TrkA [Vibrio alginolyticus] Transport of small molecules Cytoplasmic[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0006810|transport|ISS ; biological_process|GO:0006813|potassium ion transport|RCA ; molecular_function|GO:0015079|potassium ion transmembrane transporter activity|RCA PF02254|TrkA_N, TrkA-N domain|3|124|1e-20 COG0569| TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]. ; COG0569|TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]. ; COG0569|TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]. ATGAAAATCATCATCCTCGGTGCCGGCCAGGTCGGCGGCACACTGGCCGAGCACCTGGCCAGCGAAGCCAACGACATCACCGTGGTCGACACCGACGGCGACCGCCTGCGCGACCTCGGCGACCGCCTCGACATCCGCACCGTGCAAGGCAAGGCCTCGTTCCCCACGGTGCTGCGCCAGGCCGGCGCCGACGACGCCGACATGCTGGTGGCGGTGACCAATAGCGACGAGACCAACATGGTCGCCTGCCAGGTCGCCTACACCCTGTTCAACACCCCGACCAAGATCGCCCGCGTCCGCGAGCCGGCCTACCTGACCCGTACCGGGCTGTTCGACAACGAGGCGATCCCGGTGGACGTGCTGATCAGCCCGGAGCAGGTGGTCACCAACTACATCAAGCGCCTGATCGAACACCCCGGCGCGCTGCAAGTCATCGACTTCGCCGAGGGCAAGGCGCAGTTGGTCGGGATCAAGGCCTACTACGGCGGCCCTCTGGTAGGGCAGGAGCTGCGCCAGCTGCGCGAGCACATGCCGAACGTGGATACCCGCGTCGCCGCGATCTACCGCCGCAACCGGCCGATCATTCCCCAGGGCGACACGGTGATCGAGGCCGACGACGAAGTCTTCTTCATCGCCGCCAAGGCCCATATCCGCGCGGTAATGGGCGAGATGCGCAGGCTCGACGACAGCTACAAGCGGATCATCATCGCCGGCGGCGGCAATGTCGGCGAGCGCCTGGCCGAGGCCATCGAGAGCCGCTACCAGGTAAAGATCATCGAGCGCAGCCCGCTGCGCTGCCGGCACCTCTCGGATACCCTGGACAGCACCATCGTGCTCAACGGCAGCGCTTCCGACCGCGACCTGCTGCTGGAGGAAAACATCGGCGAGACCGACGTGTTCCTCGCCCTGACCAACGACGACGAGGCCAACATCATGTCCTCGCTGCTGGCCAAGCGGCTCGGCGCGAGCAAAGTGATGACCCTGATCAACAACCCGGCCTATGTCGACCTGGTGCAAGGCGGCGAGATCGACATCGCCATCAGCCCGCAACTGGCGACCATCGGCACCCTGCTGGCCCACGTTCGCCGCGGCGACATCGAGAGCGTACACTCGCTGCGCCGCGGCGCAGCCGAAGCGATCGAAGTGGTAGCCCATGGCGACGCCAAGTCGAGCAAGGTGATCGGTCGCTCGATCAACGAGATCAAGCTGCCGCCGGGCACCACCATCGGCGCGCTGGTGCGCGACGAGGAAGTGCTGATCGCCCATGGCGACACCCGCATCGAGAGCGGCGACCACGTGCTGCTGTTCCTGGTCGACAAGAAATACATCCGAGACGTCGAGCGACTGTTCCAGGCCGGCCTGACGTTCTTCTGA MKIIILGAGQVGGTLAEHLASEANDITVVDTDGDRLRDLGDRLDIRTVQGKASFPTVLRQAGADDADMLVAVTNSDETNMVACQVAYTLFNTPTKIARVREPAYLTRTGLFDNEAIPVDVLISPEQVVTNYIKRLIEHPGALQVIDFAEGKAQLVGIKAYYGGPLVGQELRQLREHMPNVDTRVAAIYRRNRPIIPQGDTVIEADDEVFFIAAKAHIRAVMGEMRRLDDSYKRIIIAGGGNVGERLAEAIESRYQVKIIERSPLRCRHLSDTLDSTIVLNGSASDRDLLLEENIGETDVFLALTNDDEANIMSSLLAKRLGASKVMTLINNPAYVDLVQGGEIDIAISPQLATIGTLLAHVRRGDIESVHSLRRGAAEAIEVVAHGDAKSSKVIGRSINEIKLPPGTTIGALVRDEEVLIAHGDTRIESGDHVLLFLVDKKYIRDVERLFQAGLTFF Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0017 CDS 18767 20071 - conserved hypothetical protein Class 4 NP_248707.1 15595215 sun;fmu PMID:94018648 ; PMID:98386520 ; PMID:15687295 ; PMID:8412700 ; PMID:9720051 b3287-b3290 (Ecoli) 63% similar to hypothetical protein Sun [Escherichia coli] BL01153: NOL1/NOP2/sun family signature ; type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 24) ; type I export signal computationally predicted by Phobius (cleavage after residue 24) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 23) Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0000154|rRNA modification|IEA ; molecular_function|GO:0016434|rRNA (cytosine) methyltransferase activity|IEA TIGR00563|rsmB|ribosomal RNA small subunit methyltransferase B|equivalog|4.5e-147|2.1.1.-|Protein synthesis|tRNA and rRNA base modification PF01029|NusB, NusB family|1|124|3e-20 COG0144| Sun, tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]. ; COG0144|Sun, tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]. ; COG0144|Sun, tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]. ATGAACCCGCGTCTCGCCGCCTGCCAGGCGCTGGCCGCGGTGCTCGCCGGACGCGCCTCGCTGTCTGGCGCGTTGCCGCCGCAACTGGACAAGGTCGCCCCGCGCGATCGCGGCCTGACCCAGGAGCTGGCCTTCGGCGCTGCGCGCTGGCAACCGCGCCTGCAGGCCCTGGCCGCGCGCCTGTTGCAGAAGCCGTTCAAGGCCGCCGACACCGATATCCACGCCCTGCTGCTGATCGGCCTCTACCAGTTGCTCTACACGCGGATTCCGCCGCACGCCGCGATCGGCGAGACCGTCGGCTGCGCCGACAAGCTGAAGAAGGGCTGGGCCAAGGGCGTGCTCAACGCCGTGCTGCGCCGCGCGCAGCGCGAAGGCGAGACGCTGCTGGCCGAGGTCGACCGCGATCCCTCAGCGCGCCTGGGCCATCCGCGCTGGCTGCTGAAAGCGCTCAAGCAGGCCTGGCCGGAGCAGCTCGACGCGCTCTGCGCAGCGAACAACGCACACCCGCCGATGACCTTGCGGGTCAATCGGCGCCACGGCGAGCGCGATGCCTACCTGGCCGAACTCGCCGAAGCCGGAATCAAGGCCCGCGCCTGCGACTACAGCCGCGACGGCATCCAGCTCGCCGCGCCGCGCGACGTGCGCGAACTACCGGGCTTCGCGGAGGGTCGCGTCAGCGTCCAGGACGAAGCCGCGCAACTGGCCGCCGAGCAGCTCGAAAGCGCGCCCGGCCAGCGTGTCCTCGACGCCTGCTGTGCGCCTGGCGGCAAGACCTGCCACCTGCTGGAAACCCAGCCGGAACTGGCCGAAGTGGTCGCCGTCGACCTCGAGGAGAGCCGCCTGGTAAGGGTCCGGGAAAACCTCCAGCGGCTCGGCCTGCAAGCCAGCCTGGTCGCCGCCGACGCCAGGGCCACCGGGGAGTGGTGGGACGGCAAGCCGTTCCAGCGCATCCTCCTCGACGCGCCGTGCTCGGCCACCGGGGTGATCCGCCGCCACCCGGACATCAAGCTGGCGCGCAAGCCGGAAGACATCGCCGCCCTGGCGCACCTGCAGGGTGAATTGCTCGACGCGCTGTGGCCTACCCTGGAAGTCGGTGGCGTACTGCTCTACGCCACCTGTTCGGTGATGCCGGCGGAAAACAGCGACAGCATCGCCGCCTTCCTCGCCCGCACGCCCGGCGCCCGCGAACTGGACCTTCCCGGCCCCTGGGGCATGAAACAGCCCCACGGCCGCCAGTTGCTGCCGCAGGTGGAGGGCCACGATGGCTTCTACTATGCCAAGCTGATCAAGATATCCGCCCGTTGA MNPRLAACQALAAVLAGRASLSGALPPQLDKVAPRDRGLTQELAFGAARWQPRLQALAARLLQKPFKAADTDIHALLLIGLYQLLYTRIPPHAAIGETVGCADKLKKGWAKGVLNAVLRRAQREGETLLAEVDRDPSARLGHPRWLLKALKQAWPEQLDALCAANNAHPPMTLRVNRRHGERDAYLAELAEAGIKARACDYSRDGIQLAAPRDVRELPGFAEGRVSVQDEAAQLAAEQLESAPGQRVLDACCAPGGKTCHLLETQPELAEVVAVDLEESRLVRVRENLQRLGLQASLVAADARATGEWWDGKPFQRILLDAPCSATGVIRRHPDIKLARKPEDIAALAHLQGELLDALWPTLEVGGVLLYATCSVMPAENSDSIAAFLARTPGARELDLPGPWGMKQPHGRQLLPQVEGHDGFYYAKLIKISAR Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0018 CDS 20068 21012 - fmt methionyl-tRNA formyltransferase Class 2 NP_248708.1 15595216 PMID:92325012 ; PMID:93163064 ; PMID:97042366 ; PMID:1624424 ; PMID:8432722 ; PMID:8887566 b3287-b3290 (Ecoli) 74% similar to methionyl-tRNA formyltransferase [Escherichia coli] One carbon pool by folate [PseudoCAP] ; Methionine metabolism [PseudoCAP] ; Aminoacyl-tRNA biosynthesis [PseudoCAP] 2.1.2.9 Amino acid biosynthesis and metabolism ; Translation, post-translational modification, degradation Unknown[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0006431|methionyl-tRNA aminoacylation|IEA ; biological_process|GO:0006520|amino acid metabolic process|ISS ; biological_process|GO:0044267|cellular protein metabolic process|ISS ; cellular_component|GO:0005737|cytoplasm|IEA ; molecular_function|GO:0004479|methionyl-tRNA formyltransferase activity|IEA TIGR00460|fmt|methionyl-tRNA formyltransferase|equivalog|1.3e-125|2.1.2.9|Protein synthesis|tRNA aminoacylation PF00551|Formyl_trans_N, Formyl transferase|5|184|2e-46 COG0223| Fmt, Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis]. ; COG0223|Fmt, Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis]. ; COG0223|Fmt, Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis]. ATGAGCCAAGCATTGCGCATCGTCTTCGCCGGAACCCCGGAATTCGCCGCCGAGCATCTCAAGGCCCTGCTCGACACCCCACATCGGATCGTCGCCGTCTACACCCAGCCTGACCGGCCGGCCGGCCGCGGGCAGAAACTGATGCCCAGCGCGGTGAAGAGCCTGGCCCTGGAGCATGGCCTGCCGGTCATGCAGCCGCAGAGCCTGCGTAATGCCGAGGCCCAGGCGGAGCTGGCGGCCCTGCGCGCGGACCTGATGGTGGTGGTCGCCTATGGCCTGATCCTGCCCCAGGCGGTACTCGATATCCCGCGCCTGGGCTGCATCAACAGCCACGCCTCGCTGCTGCCGCGCTGGCGCGGCGCCGCGCCGATCCAGCGCGCGGTGGAAGCCGGCGACGCGGAGAGCGGCGTCACCGTGATGCAGATGGAAGCAGGGCTCGACACCGGCCCGATGCTGCTCAAGGTGAGCACGCCGATTTCCGCCGCGGACACCGGCGGCAGCCTGCACGATCGGCTCGCCGCGCTCGGCCCGAAAGCGGTGATCGAAGCCATCGCCGGCCTGGCCGCCGGCACCCTGCATGGCGAGATCCAGGACGACGCCCTGGCCACCTACGCGCACAAGCTGAACAAGGACGAGGCACGCCTCGACTGGAGCCGTCCGGCCGTCGAACTGGAGCGCCAGGTCCGCGCCTTCACCCCCTGGCCGGTCTGCCACACCAGCCTCGCCGATGCGCCGCTGAAAGTCCTCGGCGCCAGCCTGGGGCAGGGCAGCGGGGCGCCCGGAACCATCCTCGAGGCCAGCCGCGACGGCCTGCTGGTCGCCTGCGGCGAAGGCGCCCTGCGCCTGACCCGCCTGCAATTGCCTGGCGGCAAGCCACTGGCCTTCGCCGACCTCTACAACAGCCGCCGCGAGCAATTCGCCGCCGGCCAGGTGCTCGGCCAATGA MSQALRIVFAGTPEFAAEHLKALLDTPHRIVAVYTQPDRPAGRGQKLMPSAVKSLALEHGLPVMQPQSLRNAEAQAELAALRADLMVVVAYGLILPQAVLDIPRLGCINSHASLLPRWRGAAPIQRAVEAGDAESGVTVMQMEAGLDTGPMLLKVSTPISAADTGGSLHDRLAALGPKAVIEAIAGLAAGTLHGEIQDDALATYAHKLNKDEARLDWSRPAVELERQVRAFTPWPVCHTSLADAPLKVLGASLGQGSGAPGTILEASRDGLLVACGEGALRLTRLQLPGGKPLAFADLYNSRREQFAAGQVLGQ Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0019 CDS 21067 21573 - def polypeptide deformylase Class 2 NP_248709.1 15595217 formylmethionine deformylase PMID:97002011 ; PMID:8845003 75% similar to E. coli polypeptide deformylase. Translation, post-translational modification, degradation Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0006464|protein modification process|IEA ; biological_process|GO:0044267|cellular protein metabolic process|ISS ; molecular_function|GO:0008463|formylmethionine deformylase activity|RCA ; molecular_function|GO:0042586|peptide deformylase activity|IEA TIGR00079|pept_deformyl|peptide deformylase|equivalog|3.4e-74|3.5.1.88|Protein fate|Protein modification and repair PF01327|Pep_deformylase, Polypeptide deformylase|3|153|2e-50 COG0242| Def, N-formylmethionyl-tRNA deformylase [Translation, ribosomal structure and biogenesis]. ; COG0242|Def, N-formylmethionyl-tRNA deformylase [Translation, ribosomal structure and biogenesis]. ; COG0242|Def, N-formylmethionyl-tRNA deformylase [Translation, ribosomal structure and biogenesis]. ATGGCCATCCTGAACATTCTCGAATTCCCCGATCCGCGCCTGCGGACCATCGCCAAACCGGTGGAGGTGGTCGACGACGCGGTGCGCCAGCTGATCGACGACATGTTCGAAACCATGTACGAAGCCCCGGGCATCGGCCTCGCCGCGACCCAGGTGAACGTGCACAAGCGCATCGTGGTCATGGACCTCAGCGAAGACAAGTCCGAGCCGAGGGTATTCATCAACCCCGAGTTCGAACCGCTGACCGAGGATATGGACCAGTACCAGGAAGGCTGCCTGTCGGTACCCGGCTTCTACGAGAACGTGGACCGACCGCAGAAGGTCCGGATCAAGGCCCTCGACCGCGATGGCAACCCCTTCGAGGAAGTCGCCGAAGGCCTGCTGGCGGTATGCATCCAGCACGAATGCGACCACCTCAACGGCAAGCTGTTCGTCGACTACCTGTCCACCCTCAAGCGCGACCGCATCCGCAAGAAGCTGGAAAAGCAGCATCGACAGCAGGCGTGA MAILNILEFPDPRLRTIAKPVEVVDDAVRQLIDDMFETMYEAPGIGLAATQVNVHKRIVVMDLSEDKSEPRVFINPEFEPLTEDMDQYQEGCLSVPGFYENVDRPQKVRIKALDRDGNPFEEVAEGLLAVCIQHECDHLNGKLFVDYLSTLKRDRIRKKLEKQHRQQA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0020 CDS 21712 22737 + hypothetical protein Class 4 NP_248710.1 15595218 PMID:15687295 type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 19) ; type I export signal computationally predicted by Phobius (cleavage after residue 19) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 19) ; Export across inner membrane confirmed by PhoA fusion screen Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] biological_process|GO:0030436|asexual sporulation|IEA ; molecular_function|GO:0003674|molecular_function|IEA TIGR02899|spore_safA|spore coat assembly protein SafA|subfamily_domain|1.6e-07||Cellular processes|Sporulation and germination COG1652|XkdP, Uncharacterized protein containing LysM domain [Function unknown]. ; COG1652|XkdP, Uncharacterized protein containing LysM domain [Function unknown]. ; COG1652|XkdP, Uncharacterized protein containing LysM domain [Function unknown]. ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCATCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGCCGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTCGATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCCGATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGAAGACCTTCACCAGCGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCCCGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGAAGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTAGCCACCGAAGGCGACGTCGCGACCCTGGCACTGACCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCCGGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGTCACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAAACGGTGCGCGACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTGAGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYVDGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYARGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMPGEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKLSYALVLMASRPLSVTDRVQNP Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0021 CDS 22872 23960 + conserved hypothetical protein Class 4 NP_248711.1 15595219 smf 59% similar to Smf protein [Escherichia coli] Membrane proteins Unknown[Class 3] ; Unknown (This protein may have multiple localization sites)[Class 3] biological_process|GO:0009294|DNA mediated transformation|IEA TIGR00732|dprA|DNA protecting protein DprA|equivalog|1.1e-94||Cellular processes|DNA transformation PF02481|DNA_processg_A, DNA recombination-mediator protein A|75|283|4e-61 COG0758|Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion]. ; COG0758|Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion]. ; COG0758|Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion]. ATGAAGAACCATTCTCCAGCCGAACTGGAAGCACGGCTGCGCCTGCATGGCCTGCCCGAACTGGGACCCATGCGCTTCCTGCGCTTGATCGAGGCCTTCGGTTCGGCCTCTTCCGCGCTTGCCGCGCCAGCCAGCGCCTGGCGCACCCTGGGAGTGCCTGCCGAGGCCGCCGCCGCGCGGCGCAGCCCGGCGGTGCGGGAAGCGGCGGGTGAAGCCCTGCGCTGGCTGGAAGGTCTGCGCAGGCACCTGCTGATGTGGGACGACCCGGGATACCCGGCACTGCTCGCCGAAGTCGCCGATGCCCCGCCGCTGCTGTACGTCGAAGGCGCTCCGGAGACTCTGGAACGGCCGCAACTGGCGATGGTCGGCAGCCGCCGCGCCAGCCCCGCCGGGCTGGGCACCGCCCGGAGCTTTGCGCGCAGCCTGGCGCAGGGCGGCTTCGCCATCACCAGCGGGCTGGCCCTGGGCATCGATGGCGCCGCCCACGAGGGCGCGCTGGAGGCTGGCGGCGCGACCGTGGCAGTCCTCGGCACCGGCCTGCGCAGGCTCTATCCGCGGCGCCACGAGGCGCTGGCGCGGCGCATCGTCGAGGGTGGCGGCGCGCTGGTTTCGGAGCTGCCGCTGGACAGCCCGCCGCTGCCGGCAAACTTTCCCCGGCGCAACCGCATCATCAGCGGACTCTCGCTGGGTGTGCTGGTGGTCGAGGCAAGTCCCGCCAGCGGCTCGCTGATCACCGCGCGGCTGGCGGCGGAACAGGGGCGCGAGGTGTACGCCATTCCGGGTTCCATCCACCATCCCGGCGCACGTGGCTGCCACCAACTGATTCGCGATGGCGCGCTGCTGGTGGAAAGCGTCGGGCACGTGCTCGAAGCACTGCGCGGCTGGGCGCAGGCGGAGCCAGCGGAAGCGCCGGCGCAGCCCCTGCCCCACCCTTTGCTGGCGCTGCTGCGCGCCGCGCCCTACACCAGCGAAGGCCTGGCCGCCGCCAGCGGCATGACGCTGCCCGATGTGCTGGCGACGCTCAGCGAACTGGAACTCGACGGCCGGGTCGCCTGCGAGGCCGGCACCTGGGTGCATCGCTCCGGCTGA MKNHSPAELEARLRLHGLPELGPMRFLRLIEAFGSASSALAAPASAWRTLGVPAEAAAARRSPAVREAAGEALRWLEGLRRHLLMWDDPGYPALLAEVADAPPLLYVEGAPETLERPQLAMVGSRRASPAGLGTARSFARSLAQGGFAITSGLALGIDGAAHEGALEAGGATVAVLGTGLRRLYPRRHEALARRIVEGGGALVSELPLDSPPLPANFPRRNRIISGLSLGVLVVEASPASGSLITARLAAEQGREVYAIPGSIHHPGARGCHQLIRDGALLVESVGHVLEALRGWAQAEPAEAPAQPLPHPLLALLRAAPYTSEGLAAASGMTLPDVLATLSELELDGRVACEAGTWVHRSG Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0022 CDS 24001 24558 + conserved hypothetical protein Class 4 NP_248712.1 15595220 yrdC 63% similar to E. coli yrdC hypothetical gene product. PF01300: SUA5/yciO/yrdC family Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] TIGR00057|TIGR00057|Sua5/YciO/YrdC/YwlC family protein|hypoth_equivalog|5.3e-14||Unknown function|General PF01300|Sua5_yciO_yrdC, yrdC domain|17|185|2e-32 COG0009|SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]. ; COG0009|SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]. ; COG0009|SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]. ATGATCAGCAGCTTTCGTGCGCAATGCGCCGCCCGGGTCGTCCGCGAGGGCGGCGTGATCGCCTATCCCACCGAGGCGGTATGGGGGCTCGGCTGCGACCCGTGGAACGAGGATGCGGTGTATCGCCTGCTGGCGCTGAAGGCGCGGCCGGTGGAAAAGGGCCTGATCGTGGTGGCGGCGAACATCCACCAGCTCGACTTCCTTCTCGAAGACCTGCCGGACGTCTGGCTGGACCGCCTGGCCGGTACCTGGCCGGGGCCGAACACCTGGCTGGTGCCGCACCAGGAGCGCCTGCCGGAGTGGGTCACCGGCGTCCACGACAGCGTCGCCGTGCGGGTCACCGACCATCCCCTGGTACAGGAACTGTGCCATCTCACCGGTCCGCTGATCTCCACCTCGGCCAATCCGGCCGGGCGCCCGGCGGCGCGCACGCGGCTGCGGGTGGAGCAATACTTCCACGACGAGCTGGACGCTATCCTCGGCGGCGCCCTTGGCGGGCGCCGCAACCCCAGCCTGATCCGCGACCTGGTGACTGGACAGGTCATCCGCCCGGCCTGA MISSFRAQCAARVVREGGVIAYPTEAVWGLGCDPWNEDAVYRLLALKARPVEKGLIVVAANIHQLDFLLEDLPDVWLDRLAGTWPGPNTWLVPHQERLPEWVTGVHDSVAVRVTDHPLVQELCHLTGPLISTSANPAGRPAARTRLRVEQYFHDELDAILGGALGGRRNPSLIRDLVTGQVIRPA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0023 CDS 24568 25545 - qor quinone oxidoreductase Class 2 NP_248713.1 15595221 NADPH:quinone reductase PMID:95326140 ; PMID:7602590 72% similar to quinone oxidoreductase [E. coli] PS01162: Quinone oxidoreductase / zeta-crystallin signature 1.6.5.5 Energy metabolism Unknown[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0006091|generation of precursor metabolites and energy|ISS ; biological_process|GO:0008152|metabolic process|IEA ; molecular_function|GO:0003960|NADPH:quinone reductase activity|RCA ; molecular_function|GO:0004459|L-lactate dehydrogenase activity|ISS ; molecular_function|GO:0016655|oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor|IEA TIGR02824|quinone_pig3|putative NAD(P)H quinone oxidoreductase, PIG3 family|subfamily|9.7e-22||Unknown function|Enzymes of unknown specificity PF00107|ADH_zinc_N, Zinc-binding dehydrogenase|141|281|2e-26 COG0604|Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]. ; COG0604|Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]. ; COG0604|Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]. ATGGCCAAGCGCATCCAGTTCGCTGCCTACGGCGGCCCCGAAGTCCTCGAATACCGCGACTACCAACCCGCCGAGCCGGGCCCCCGGGAAGTCCGCGTGCGCAATCGCGCCATTGGCCTGAACTTCATCGACACCTACTACCGCAGCGGCCTCTATCCGGCCCCCGGCTTACCCTCGGGACTGGGTAGCGAAGGTGCCGGCGAGGTCGAGGCGGTGGGCAGCGAAGTGACCCGTTTCAAGGTCGGCGACCGCGTCGCCTACGCCACCGGCCCCCTGGGCGCCTACAGCGAACTGCATGTGCTGGCGGAGGAGAAGCTGGTCCACCTGCCCGACGGCATCGACTTCGAACAGGCCGCCGCGGTGATGCTCAAGGGGCTCACCACCCAATACCTGCTGCGCCAGACCTACGAACTGCGGGGCGGCGAAACCATTCTCTTCCATGCCGCCGCGGGCGGCGTGGGCCTGTTCGCCTGCCAATGGGCCAAGGCCCTTGGAGTGCAACTGATCGGCACCGTCAGCTCGCCGGAAAAGGCGCGCCTGGCCAGGCAGCACGGTGCCTGGGAGACCATCGACTACAGCCACGAGAACGTGGCGCGGCGGGTGCTCGAACTGACCGACGGGAAGAAGTGCCCGGTGGTCTACGACTCGGTGGGCAAGGATACCTGGGAAACCTCGCTGGACTGCGTGGCGCCGCGCGGCTTGCTGGTCAGCTTCGGCAACGCCTCGGGGCCGGTGACCGGGGTCAACCTCGGCATCCTCTCGCAGAAGGGTTCGCTGTACGTGACCCGGCCGACCCTGGGCAGCTACGCCGATACCCCGGAAAAACTCCAGGCGATGGCCGACGAGCTGTTCGGCCTGATCGAGCGCGGCGACATCCGCATCGAGATCAACCAGCGCTTCGCCCTGGCCGAAGCAGCCAGGGCGCATACCGAACTGGCCGCACGGCGAACCACCGGCTCGACCGTACTGTTGCCCTGA MAKRIQFAAYGGPEVLEYRDYQPAEPGPREVRVRNRAIGLNFIDTYYRSGLYPAPGLPSGLGSEGAGEVEAVGSEVTRFKVGDRVAYATGPLGAYSELHVLAEEKLVHLPDGIDFEQAAAVMLKGLTTQYLLRQTYELRGGETILFHAAAGGVGLFACQWAKALGVQLIGTVSSPEKARLARQHGAWETIDYSHENVARRVLELTDGKKCPVVYDSVGKDTWETSLDCVAPRGLLVSFGNASGPVTGVNLGILSQKGSLYVTRPTLGSYADTPEKLQAMADELFGLIERGDIRIEINQRFALAEAARAHTELAARRTTGSTVLLP Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0024 CDS 25736 26653 + hemF coproporphyrinogen III oxidase, aerobic Class 2 NP_248714.1 15595222 PMID:93352403 ; PMID:8349542 80% similar to S. typhimurium hemF gene product. Porphyrin and chlorophyll metabolism [PseudoCAP] ; biosynthesis of proto- and siroheme [PseudoCyc] 1.3.3.3 Biosynthesis of cofactors, prosthetic groups and carriers Unknown[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0015994|chlorophyll metabolic process|ISS ; biological_process|GO:0051188|cofactor biosynthetic process|ISS ; molecular_function|GO:0004049|anthranilate synthase activity|IDA PF01218|Coprogen_oxidas, Coproporphyrinogen III oxidase|1|301|1e-164 COG0408|HemF, Coproporphyrinogen III oxidase [Coenzyme metabolism]. ; COG0408|HemF, Coproporphyrinogen III oxidase [Coenzyme metabolism]. ; COG0408|HemF, Coproporphyrinogen III oxidase [Coenzyme metabolism]. GTGACCGACCGTATCGCCGCTGTCAAAACCTACCTGCTCGACCTGCAAGACCGCATCTGCGCCGCCCTCGAGGCGGAGGACGGCAAGGCCCGCTTCGCCGAGGACGCCTGGGAGCGTCCGGCCGGTGGCGGCGGACGGACGCGGGTAATCGGCGACGGCGCATTGATCGAGAAGGGCGGGGTGAATTTTTCCCACGTCTTCGGCGATAGCCTGCCGCCCTCGGCCAGCGCCCATCGGCCGGAACTGGCCGGGCGCGGTTTCCAGGCGCTCGGCGTGTCGCTGGTGATCCATCCGGAAAACCCCCACGTGCCGACGTCCCATGCCAACGTGCGTTTCTTCTGCGCCGAGAAGGAAGGCGAGGAGCCGGTCTGGTGGTTCGGCGGCGGCTTCGATCTGACCCCCTACTACGCCCACGAGGAAGACTGCGTGCATTGGCACCGGGTCGCTCGCGACGCCTGCGCGCCGTTCGGCGCGGACGTCTACCCGCGCTACAAGGAATGGTGCGACCGCTACTTCCACCTCAAGCACCGCAACGAGCCGCGCGGCATCGGCGGCCTGTTCTTCGACGACCTCAACCAGTGGGACTTCGACACCTGCTTCGCCTTCATCCGCGCCATCGGCGATGCCTATATCGACGCCTACCTGCCGATCGTCCAGCGCCGCAAGCACACGCCGTTCGATGAACGGCAGCGAGAGTTCCAGGCCTATCGTCGCGGTCGCTATGTGGAGTTCAACCTGGTCTTCGATCGTGGCACCCTGTTCGGCCTGCAGTCCGGCGGCCGTACCGAATCGATCCTGATGTCGTTGCCGCCGCAGGTGCGCTGGGGCTATGACTGGAAACCCGAGCCGGGCAGCGAGGAAGCGCGCCTGACCGAGTATTTCCTCGCCGACCGCGATTGGCTCGCCGGCCAGCCCTGA MTDRIAAVKTYLLDLQDRICAALEAEDGKARFAEDAWERPAGGGGRTRVIGDGALIEKGGVNFSHVFGDSLPPSASAHRPELAGRGFQALGVSLVIHPENPHVPTSHANVRFFCAEKEGEEPVWWFGGGFDLTPYYAHEEDCVHWHRVARDACAPFGADVYPRYKEWCDRYFHLKHRNEPRGIGGLFFDDLNQWDFDTCFAFIRAIGDAYIDAYLPIVQRRKHTPFDERQREFQAYRRGRYVEFNLVFDRGTLFGLQSGGRTESILMSLPPQVRWGYDWKPEPGSEEARLTEYFLADRDWLAGQP Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0025 CDS 26711 27535 + aroE shikimate dehydrogenase Class 2 NP_248715.1 15595223 PMID:88134021 ; PMID:3277621 64% similar to E. coli shikimate dehydrogenase. Phenylalanine, tyrosine and tryptophan biosynthesis [PseudoCAP] ; phenylalanine, tyrosine and tryptophan biosynthesis, complete [PseudoCyc] ; chorismate biosynthesis [PseudoCyc] ; pathways of chorismate [PseudoCyc] 1.1.1.25 Amino acid biosynthesis and metabolism Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0000162|tryptophan biosynthetic process|ISS ; biological_process|GO:0006520|amino acid metabolic process|ISS ; biological_process|GO:0006571|tyrosine biosynthetic process|ISS ; biological_process|GO:0009094|L-phenylalanine biosynthetic process|ISS ; biological_process|GO:0009423|chorismate biosynthetic process|IEA ; molecular_function|GO:0004764|shikimate 5-dehydrogenase activity|IEA ; molecular_function|GO:0018660|4-hydroxyphenylacetate 3-monooxygenase activity|IDA TIGR00507|aroE|shikimate 5-dehydrogenase|equivalog_domain|2.2e-96|1.1.1.25|Amino acid biosynthesis|Aromatic amino acid family PF01488|Shikimate_DH, Shikimate / quinate 5-dehydrogenase|116|214|3e-18 COG0169|AroE, Shikimate 5-dehydrogenase [Amino acid transport and metabolism]. ; COG0169|AroE, Shikimate 5-dehydrogenase [Amino acid transport and metabolism]. ; COG0169|AroE, Shikimate 5-dehydrogenase [Amino acid transport and metabolism]. ATGGACCGCTATTGCGTATTCGGCAACCCCATCGGCCACAGCAAGTCGCCGCTGATCCACCGCCTGTTCGCCGAGCAGACCGGCGAGGCGCTGGTCTATGACGCGCAACTGGCGCCGCTGGACGATTTCCCCGGGTTCGCCCGGCGCTTCTTCGAGCAGGGCAAGGGCGCCAATGTCACCGTGCCGTTCAAGGAAGAGGCCTATCGTCTGGTGGACGAGTTGAGCGAGCGGGCCACCCGGGCCGGGGCGGTGAACACCCTGATCCGCCTCGCCGACGGTCGCCTGCGCGGCGACAACACCGACGGCGCCGGCCTGCTGCGGGACCTGACGGCGAACGCCGGGGTCGAGCTGCGCGGCAAGCGGGTTCTCCTGCTCGGCGCCGGCGGTGCGGTGCGTGGGGTGCTCGAACCCTTCCTCGGCGAGTGCCCGGCGGAGTTGCTGATCGCCAACCGCACGGCGCGGAAGGCCGTGGACCTGGCCGAGCGGTTCGCCGACCTCGGCGCGGTGCACGGCTGCGGTTTCGCCGAGGTCGAAGGGCCTTTCGACCTGATCGTCAACGGCACCTCGGCCAGTCTTGCCGGCGACGTGCCGCCGCTGGCGCAGAGCGTGATCGAGCCCGGCCGTACCGTCTGCTACGACATGATGTATGCCAAGGAACCGACTGCCTTCAACCGCTGGGCCGCCGAACGCGGTGCGGCGCGTACCCTGGATGGCCTGGGCATGCTGGTGGAGCAGGCCGCCGAGGCATTCTTCCTCTGGCGCGGCGTGCGTCCTGCCTCGGCGCCAGTGTTGGAGACGCTGCGCCGACAGTTGGCAACTGTCTGA MDRYCVFGNPIGHSKSPLIHRLFAEQTGEALVYDAQLAPLDDFPGFARRFFEQGKGANVTVPFKEEAYRLVDELSERATRAGAVNTLIRLADGRLRGDNTDGAGLLRDLTANAGVELRGKRVLLLGAGGAVRGVLEPFLGECPAELLIANRTARKAVDLAERFADLGAVHGCGFAEVEGPFDLIVNGTSASLAGDVPPLAQSVIEPGRTVCYDMMYAKEPTAFNRWAAERGAARTLDGLGMLVEQAAEAFFLWRGVRPASAPVLETLRRQLATV Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0026 CDS 27646 28632 + plcB phospholipase C, PlcB Class 1 NP_248716.1 15595224 PlcB is required for directed twitching motility up a gradient of phosphatidylcholine (PC), or phosphatidylethanolamine (PE) with specific type of fatty acid residues. PlcB can hyrolyse both PC and PE, and secreted via the Sec pathway. Proteins encoded by PA0027 & PA0028 are required for the proper folding (PA0027) of PlcB and to chaperone (PA0028) it through the inner and outer membrane. PMID:15306013 ; PMID:15687295 PA0026, PA0027 & PA0028 constitute an operon 3 His residues are involved in coordinating three zinc ions in the active site. The region encompassing the active site shares limited, but significant similarity to the zinc dependent PlCs of Gram-positive bacteria, including Bacillus cereus, Listeria monocytogenes (PlcB), Clostridium perfringens (alpha toxin) ; type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 22) ; type I export signal computationally predicted by Phobius (cleavage after residue 22) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 22) Hypothetical, unclassified, unknown Extracellular[Class 1] ; Unknown[Class 3] ; Unknown[Class 3] biological_process|GO:0008150|biological_process|IDA ; cellular_component|GO:0005575|cellular_component|IDA ; molecular_function|GO:0003674|molecular_function|IDA ATGAAAACCTTCGCCCGCCTGGCCGCCGGTCTCTGCATCTGCGCCATCGCCAGCCAGGCCAACGCCTGGTCGCAACCGACCCACAAGAACATCGTCAAGGATGCCCTGGCCTTCATGAACTCCTCCTACGCCACCGAGGAGATGCGCCAGGCCTACCGGTTCTACGTGAGCGCCGCCGGCAGCGAGGCGCAGGCCGGGGAGATCCTCGGCCAGGCGGCCTTCGACGTGGACGACTTCAAGGACACCCGTCTCGGTGGCTGGTGGGTCGGCTACGAACACGCGCCGCTGTGGGGCGCGGCTTCGGGCATCGTCAACTACACCTCGTACTGGCACTTCCTCAACCTGGCCCGGGACGGCGACTCCCATGGCAACCCCCACGGCGGCTACGACTACCGCTACCACAAGGTCGACGGCGGCATCGCCGACGTCGACTGGTACGCCATGGTCTACCTCTACAACCGCGAGCTGAAGCGCGAGGACTTCGACACCACCGAGGCGCACTACCGCCAGGGCACCCGCTCGGACTGGCAGGAGCACTACGGCGACTTCCAGACCGCCGCCTTCCAGCCGATCGATAACCTCGCCACCTACTGGTTCGAGCAGTTCCGCGCCGCGCCTTCGCTGCAGACCATCGGCTATGCCCTGCATGCCACCGGCGACGTGGCCCAGCCGCACCATGTGTGGATCACCTCGGCCAACGGCCATTCCAGCTGGGAAGGCTGGGTCGACGACCACTACGCCAGCGAGAAGCTCAACGACCCGGCGGCGGTGGCCAACCTGGTGGGGCGCTACGACCCGAGCAAGAGCATCCGCGACCTGCTCACCCAGACCGGCCAGGTCGCCTACGCGCGCCCCGAGCCGCTCTACGACACCAGCTACGAGACGCGCCTGCGGGTGGCGAAGGAGCTGATTCCCGAGTCCATCGCCCTGACCGTCACCGTACTGACCAAGGGCGCCAACAGCTTCGATGCACCGACTGCTCTCTGA MKTFARLAAGLCICAIASQANAWSQPTHKNIVKDALAFMNSSYATEEMRQAYRFYVSAAGSEAQAGEILGQAAFDVDDFKDTRLGGWWVGYEHAPLWGAASGIVNYTSYWHFLNLARDGDSHGNPHGGYDYRYHKVDGGIADVDWYAMVYLYNRELKREDFDTTEAHYRQGTRSDWQEHYGDFQTAAFQPIDNLATYWFEQFRAAPSLQTIGYALHATGDVAQPHHVWITSANGHSSWEGWVDDHYASEKLNDPAAVANLVGRYDPSKSIRDLLTQTGQVAYARPEPLYDTSYETRLRVAKELIPESIALTVTVLTKGANSFDAPTAL Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0027 CDS 28613 29899 + hypothetical protein Class 4 NP_248717.1 15595225 PMID:15687295 type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 30) ; type I export signal computationally predicted by Phobius (cleavage after residue 30) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 30) Hypothetical, unclassified, unknown Unknown (This protein may have multiple localization sites)[Class 3] ; Unknown (This protein may have multiple localization sites)[Class 3] COG0760|SurA, Parvulin-like peptidyl-prolyl isomerase [Posttranslational modification, protein turnover, chaperones]. ; COG0760|SurA, Parvulin-like peptidyl-prolyl isomerase [Posttranslational modification, protein turnover, chaperones]. ; COG0760|SurA, Parvulin-like peptidyl-prolyl isomerase [Posttranslational modification, protein turnover, chaperones]. ATGCACCGACTGCTCTCTGATCGCGCCCGGGGCTGGCGTCGCGCACTGTGCGGGATCGTCCTCGGGCTGCTGGCGTGGAGCGCCCATGGCGTCCCCGCCAAGGCGCCGCAGGATCTGCGGATCGACGGCGAGGTGCTGCCGGGGAGAAGCATCGACTTGCTCGAGCAGGCCCTGTCGCGGGTCAAGTTCAACACCGACCCGCAGCAGTTGCGCCGTGGCCTGGTGGAAAACCGCCTGCTGGCGCGCGCGGTGGAAGACCAGCTCACCGCGCAGAGCCGCGCCGATCTCGACGCCAGCGTGGAGATCGAGGCCGGCAACCTGCTCGAACAGGTATACGGCAGGCGCTACCGCGAGGACCTCGGGCCATACCTGCGCCAGCCCCGGGCCCTGAGCGCGGAGCGTTTGCGCGAGGTGCTGGCGCCGAGGAGCCGCGGCCTGGTGGAAAACAGCCTGCTGCTGGACGAGACGCAGCGCCGCGAGGCGGCCGGGGTCGAGCTGATCGGCTGGCAGTTTCCCGGCCAGCCGGCACAGGTCCTCGACCTGCTATCGCTGTACGAAGGCGACAACGTCCAGGGCCAGGTGGAATTGCAACAGGGCAACCTCGCTTACCTGGCGCGCCAGGTCCAGACCCGCATCCGCCGCGACTACCTCTGGTACCGCCTGGCCCGGGACGGCTTCGGCCCGGCAGAGCGGCAGGGCGTGAGGACCCTGGTGCGGGACAAGCTGGTGCGCCATCGCTATCTGCACCAGATCGGCCTCTACAGTGATTTCCACCATGAGTCCGATGCGCTGCGGGAACTCGCCGGCAAGGTCAGCGACAAGGACGCCGAGGCCTACTATCGGCGCAACCTGGAGCGTTACCGCAACGTCGCGCAGGTGCAGGCGGCGCATATCCGCCTGGCCGACCAGGCGAGCGCGGACAAGGTCTACGCCGAGTTGCGCGGCGGCCTGGCCTTCGACGAGGCGGTACGCCGCTATTCCCTGGCCGACGACAGGGACCGCGACCCGCCCGGCGACCTAGGCCTGATACGGCCCCAGGACGGCCGGCTCGACCTGCTGCGCAAGACTGCGCTGATCCAGAAGGCCGATACGGTTTCCCAGCCGATGCGCATCGACGGCGCGTTCGAGATCGTCCGGGTGCGTAGCCGCGAGGATCGCCAGTTGCCCCTCGACGACCGCAGCGTGCGCTTCGAGGTGAACCAGGCGGTGGCGCGCGAGCAACTGGCAGCGCAGTTCGAGACGCGCCTGCGCAACCTGCTGGCCGGCGCCAGGGTGGAAGGCCTGTGA MHRLLSDRARGWRRALCGIVLGLLAWSAHGVPAKAPQDLRIDGEVLPGRSIDLLEQALSRVKFNTDPQQLRRGLVENRLLARAVEDQLTAQSRADLDASVEIEAGNLLEQVYGRRYREDLGPYLRQPRALSAERLREVLAPRSRGLVENSLLLDETQRREAAGVELIGWQFPGQPAQVLDLLSLYEGDNVQGQVELQQGNLAYLARQVQTRIRRDYLWYRLARDGFGPAERQGVRTLVRDKLVRHRYLHQIGLYSDFHHESDALRELAGKVSDKDAEAYYRRNLERYRNVAQVQAAHIRLADQASADKVYAELRGGLAFDEAVRRYSLADDRDRDPPGDLGLIRPQDGRLDLLRKTALIQKADTVSQPMRIDGAFEIVRVRSREDRQLPLDDRSVRFEVNQAVAREQLAAQFETRLRNLLAGARVEGL Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0028 CDS 29896 30498 + hypothetical protein Class 4 NP_248718.1 15595226 PMID:15687295 Type II (lipoprotein) export signal predicted by LipoP (cleavage after residue 19) Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] GTGAAGCGCTGGCTCGGCGTTGCCCTCGGCTGCAGCGGGCTGGCGATCGCCCTGGCCTGCGCCGGCGTGTTGCTGGCGCCTGCCGATATGGCCGCTTCCTCGTCTTCTCCGTCGCCAGCCAGGACGGTTGCGGCACTGCCCGCGGTCGACGACCGTCCGCCGCCGCCGGCGCCGGTGCGATCGCAAGCGGCAGCACCGGCGTACGAGGCGGAGCCGCCGGTGGCGGAACTGGATCGCGAGCAGGCGATCCAGTTCATGCAGATGCTGCGCGACGAGGGCGACCCGCGCAGCCCGCCGCTCGGCGGCCTGCAACCACGCCAGGGCGCGACGGCGCAGGAGCTGGCCGATCCGAAGCAGTACCAGGCCTTCGAGGAACGACAGACCCGCGAACTGGTACAGGCCTACACCAGCGGCGTACAGCAGATACCGGAAATCCGCGCGCGGATCGAGGCGGCCGAACAGGGTGGCGAGCGCAGCGCCGAGGAAATCGACGAGGCTCGCGCCGCCCTTGGACAGTTGGAGATGATGCGCGACAAGCTGCAGCGGGAATCGCCGCAACTGCTGCCCGGCGACAGCGCACCGACATCGCCGGCGGCGCCCTGA MKRWLGVALGCSGLAIALACAGVLLAPADMAASSSSPSPARTVAALPAVDDRPPPPAPVRSQAAAPAYEAEPPVAELDREQAIQFMQMLRDEGDPRSPPLGGLQPRQGATAQELADPKQYQAFEERQTRELVQAYTSGVQQIPEIRARIEAAEQGGERSAEEIDEARAALGQLEMMRDKLQRESPQLLPGDSAPTSPAAP Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0029 CDS 30502 32055 - probable sulfate transporter Class 3 NP_248719.1 15595227 PMID:15687295 48% similar to putative high affinity sulfate transporter [Aquifex aeolicus] 10 predicted transmembrane helices ; PS01130: Sulfate transporters signature ; 11 predicted transmembrane helices (TMHMM v.2.0) ; Export across inner membrane confirmed by PhoA fusion screen Membrane proteins ; Transport of small molecules Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0008272|sulfate transport|IEA ; cellular_component|GO:0016020|membrane|IEA ; molecular_function|GO:0015116|sulfate transmembrane transporter activity|IEA TIGR00815|sulP|sulfate permease|subfamily|4.7e-83||Transport and binding proteins|Anions PF00916|Sulfate_transp, Sulfate transporter family|117|416|3e-47 COG0659|SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]. ; COG0659|SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]. ; COG0659|SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]. ATGTGGACGCGCCTGCTGCCGTTCCTCGCCTGGCTACCGGGGCTGCACCGGGGCATGCTCGGGCGCGAGGCCTGGGTCGGCCTGAATGGCGCAATCCTGGCACTGCCGCAATCGATGGCCTATGCGCTGATCGCCGGCCTGCCAGCGGAGTACGGCCTGTACGCGGCGATGCTGCCAGTGGCGATCGCCTGCCTGTGGGGCTCGTCGCGCTACCTGGTGAGCGGTCCCACCGCGGCGATCTCGGTGCTGCTGTTCAGTTCGGTGGCCCCGCTGGCGCCGCTGGGCAGCCCGCAATACGTCCAGGCCGTGCTGCTGCTGACCTTTCTCGCCGGCGCCTTCCAGTGGCTGCTCGGCGTCCTGCGCGTCGGGTCGCTGGTCAATTTCGTCTCGCATTCGGTGATGCTCGGCTTCACCCTTGGCGCGGCGCTGCTGATCGTCCTCGGCCAACTGCCCTATCTTCTCGGCCTGGCCGCGAGCGGGGAGGGCGCAGCGCCGGGAAACGGCTGGCGGCTGCTGGCGCGGTTCGCCGAGTTCGATGGCCCATCGCTGCTGGTGGGCGGCTTCAGCTTCGCGCTCAGCCTGCTGGTCAGGCGCCTGCGACCGCGCTGGCCGGCCCTGCTGCTTGGCTTGCTGGGCGGTGCCACGCTGGTCTGGGCGCTACCCGGGACCTTCGCCTCGGTAGCCCATGTGCAGGCCTTATCGAGCGCACTGCCGGGCTGGAGTCCGCTGGTCTTCGATTCCCGATCGATCCTCGACCTGCTACCTGCGGCGGTGGCCTGCGGCATGCTCGGGCTGGTCACCAGCCTATCGATCGCCCGCGCCCTGGCCGCGCGCCAGGGAGACGCGTTCGATGCCAACCAGGAGGTCCGCGCCCAGGGCCTGTCGAACCTGCTCGGGCCTTGGCTGTCGGCGAGCCTGTCGGCGGGCTCCTTCACCCGCTCCGGGCTGAATCTGGAAGCCGGTGCGCGCTCCCCGCTGGCGGGTGCGTTTTCGGCGCTCTGGGTGGCACTGCTGGCCGTGCTCGGTGCGCGCCTGATCGAGCATGTGCCGTTGCCGGCGATGGCCGCAGGCATCCTGCTGATCGCCTGGGGCCTGATCGACCGCCCAGCGCTCCGCGCGCTCTACCGCAGCGGCCGCGCCGAATGCCTGGTGGCCGGCCTAACCGCCCTGGCCACGCTGCTGTTGCCGCTGCAGAACGCCATCTACGCGGGAGTGCTGGCGTCGCTGGTCTTCTACCTGCGGCGCACCTCGACACCACGCGTACTGCGCCAGCGCAACGACGAGGAAGAAGTGCTGCGCATCGAAGGCTCGATCTTCTTCGGCGCCTGCGACTACCTGCAACGCCTCATGCGCCAATGCGACAGGCCACGGCTGGTGCTGGACGCCCGCCAGGTGAACTTCATCGACTTCGCCGGCGCAGTGCTGTTGCAGCAGGAAGCCCGCCGCCTGCACGCCGAGGGCCGCCGCCTGGTATTGCGCCACGCCCGCCCGCAGGTCCGCGAAGCGCTGGGCCGGCAGGCCGACGAAGGCTGCCGCCTGCACTACGAAGGCTGA MWTRLLPFLAWLPGLHRGMLGREAWVGLNGAILALPQSMAYALIAGLPAEYGLYAAMLPVAIACLWGSSRYLVSGPTAAISVLLFSSVAPLAPLGSPQYVQAVLLLTFLAGAFQWLLGVLRVGSLVNFVSHSVMLGFTLGAALLIVLGQLPYLLGLAASGEGAAPGNGWRLLARFAEFDGPSLLVGGFSFALSLLVRRLRPRWPALLLGLLGGATLVWALPGTFASVAHVQALSSALPGWSPLVFDSRSILDLLPAAVACGMLGLVTSLSIARALAARQGDAFDANQEVRAQGLSNLLGPWLSASLSAGSFTRSGLNLEAGARSPLAGAFSALWVALLAVLGARLIEHVPLPAMAAGILLIAWGLIDRPALRALYRSGRAECLVAGLTALATLLLPLQNAIYAGVLASLVFYLRRTSTPRVLRQRNDEEEVLRIEGSIFFGACDYLQRLMRQCDRPRLVLDARQVNFIDFAGAVLLQQEARRLHAEGRRLVLRHARPQVREALGRQADEGCRLHYEG Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0030 CDS 32060 32983 - hypothetical protein Class 4 NP_248720.1 15595228 PMID:15687295 type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 22) ; type I export signal computationally predicted by Phobius (cleavage after residue 22) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 22) Transport of small molecules Unknown[Class 3] ; Unknown[Class 3] biological_process|GO:0015871|choline transport|IEA ; cellular_component|GO:0055052|ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing|IEA ; molecular_function|GO:0015220|choline transmembrane transporter activity|IEA TIGR03414|ABC_choline_bnd|choline ABC transporter, periplasmic binding protein|subfamily|1.2e-204||Transport and binding proteins|Amino acids, peptides and amines PF04069|OpuAC, Substrate binding domain of ABC-type glycine betaine transport system|28|279|5e-55 COG2113|ProX, ABC-type proline/glycine betaine transport systems, periplasmic components [Amino acid transport and metabolism]. ; COG2113|ProX, ABC-type proline/glycine betaine transport systems, periplasmic components [Amino acid transport and metabolism]. ; COG2113|ProX, ABC-type proline/glycine betaine transport systems, periplasmic components [Amino acid transport and metabolism]. ATGAACCGGCTTCCCACCTGCCTGCTGGCCGCAACCCTGTTCCTGGGCAGCGCCTCGCTATACGCCGAAGACCCCGCCTGTGCCCGCGTCAGGCTGGCCGATCCAGGCTGGAGCGATATCGCGGTGACCAACGCCACCGCCGCGTTTCTCCTGGAAAGCCTCGGCTACCAGGTGAAGATCGATACCCTGTCGGTGCCGATCATCTATGGCGGCCTGCGCGACGGCCAGGTGGACGCCTTCCTCGGCGGCTGGATGCCCGCGCACCAGGACTATCACGACAAGTTCGTCGCCAGCGGCCAGGTCGAACGCCTCGGTCGCAACCTCGACGGCACCCGCTTCACCCTGGCGGTGCCGCGCTACGTCTGGGACGCCGGCGTACACCGCTTCGAGGACCTCGCCGCGCAAGGGCAACGCTTCAACCGCAAGCTGTACGGGATCGGCTCCGGCGCGCCGGCCAATCAGTCGATCCAGAAGATGATCGACGCCAACCAGTTCGGCCTCGGCGACTGGAAGCTGGTGGAGTCCAGCGAGCAGGCGATGCTCGCCGAACTCGGCCGGGCCGAGAAGCGCCAGCGCTGGCTGGTGTTCCTCGGCTGGACGCCGCACCCGATGAACATCCGCCATGACCTGCGCTACCTGGAAGGCGGCGAGCAGTACTTCGGCGACCGCGGCCAGGTCTACACCCTGGCACGCAAGGGCTACGCCGCGCAGTGCCCGAACCCGGCGCGGCTGCTGGCCAACCTGCGCTTCGACCTGGACATGGAGAACCGCCTGATGAGCGACGCGCTGGAAGGCACGGCGACTCCGGCCTCGGCGACCCGCGCCTGGCTCAAGGCCAACCCGCGGGTGCTCGAGGCCTGGCTGCAAGGGGTGACCAGCCGCGACGGCGGCGACGCCCTGGCCGCGGTTCGCGGCCAGCCATAG MNRLPTCLLAATLFLGSASLYAEDPACARVRLADPGWSDIAVTNATAAFLLESLGYQVKIDTLSVPIIYGGLRDGQVDAFLGGWMPAHQDYHDKFVASGQVERLGRNLDGTRFTLAVPRYVWDAGVHRFEDLAAQGQRFNRKLYGIGSGAPANQSIQKMIDANQFGLGDWKLVESSEQAMLAELGRAEKRQRWLVFLGWTPHPMNIRHDLRYLEGGEQYFGDRGQVYTLARKGYAAQCPNPARLLANLRFDLDMENRLMSDALEGTATPASATRAWLKANPRVLEAWLQGVTSRDGGDALAAVRGQP Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0031 CDS 33000 34511 - betC choline sulfatase Class 2 NP_248721.1 15595229 PMID:98409668 ; PMID:9736747 62% similar to choline sulfatase [Sinorhizobium meliloti] PS00523: Sulfatases signature 1 betaine biosynthesis III [PseudoCyc] Adaptation, Protection Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0008152|metabolic process|RCA ; biological_process|GO:0050896|response to stimulus|ISS ; molecular_function|GO:0008484|sulfuric ester hydrolase activity|RCA TIGR03417|chol_sulfatase|choline-sulfatase|equivalog|0|3.1.6.6|No Data|No Data PF00884|Sulfatase, Sulfatase|3|419|3e-36 COG3119|AslA, Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism]. ; COG3119|AslA, Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism]. ; COG3119|AslA, Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism]. ATGAAGACCTCGCCGAACATCCTGTTCATCATGGCCGACCAGATGGCCGCGCCGCTGCTGCCGCTTCACGATCCGCGCTCGGTGCTGCGCATGCCTCACCTCTCGCGCCTCGCCGAACGGGCCGTGGTGTTCGACTCGGCATACTGCAACAGCCCGCTCTGCGCGCCGTCGCGCTTCACCCTGGTCAGCGGTCGCTTACCTACCCGCATCGGCGCCTGGGACAACGCTGCCGACTTCGCCGCCGATACCCCCACCTACGCCCACTACCTGCGCAACCTCGGCTATCGCACGGCGCTGTCGGGCAAGATGCACTTCTGCGGTCCCGACCAGTTGCACGGCTACGAGGAACGCCTGACCAGCGACATCTATCCGGCGGACTATGGCTGGGCGGTGAACTGGGACGAGCCGGAGGTGCGCCCGAGCTGGTACCACAACATGTCCTCGGTTTTGCAGGCCGGTCCCTGCGTGCGCACCAACCAGCTGGACTTCGACGAGGAGGTGGTGTTCAAGGCCCGCCAGTACCTCTACGACCATGTTCGCCAGCACGCCGGCCAGCCATTCTGCCTGACCGTGTCGATGACCCATCCGCACGACCCCTACAGCATCCCGGCGAGCTACTGGAATCTCTACCGCGACGAGGACATCCCGCTGCCGCGCCAGCGCTTCGCCCAGGAGGAGCAGGACCCTCATTCGCAACGCCTGCTGAAGGTCATCGACCTGTGGGACAAGCCGTTGCCCGAGGAGCGCATCCGCGCCGCCCGGCGTGCCTACTTCGGCGCCTGCAGCTACGTCGACGCGCAGATCGGTGCGCTGCTGGCGACCCTGGAGAAATGCGGGCTGGCCGACGACACCATCGTGGTGTTCTCCGGCGACCATGGCGACATGCTCGGCGAGCGCGGCCTCTGGTACAAGATGCACTGGTTCGAGATGGCCGCGCGCGTGCCGCTGCTGGTCCATGCGCCGGCGCGCTTCGCGCCGCGCCGCATCGGCGCTTCGGTATCCACCGTGGACCTGCTGCCGACCCTGGTGGAGCTGGCCGGCGGCCAGGTCGATCCACGCCTGCCGCTGGAAGGCCGCTCGCTGCTGCCGCACCTGCGCGACGGCAGCGGGCATGACGAGGTGATCGGCGAATACACCGCCGAGGGCACCCTCAGCCCGCTGATGATGATCCGCCGCGGCGACTACAAGTTCATCTACTCCGAGCAGGACCCCTGCCTGCTCTACGACCTGCGCAACGATCCGCAGGAACGCGAGAACCTCGCCGCCAGTCCGGCCCACCGCGGAACGTTCGAGGCGTTCCTCGACGAGGCCCGGCGACGCTGGGACATCCCCGCGATCACCCGCGCCGTACTCGACAGCCAGCGCCGCCGACGCCTGGTGGCCGCCGCGCTGGCGCGAGGACGGCTGGCCAGCTGGGACCACCAGCCGTGGGTCGATGCCAGCCAGCAGTACATGCGCAACCATATCGACCTGGACGATCTCGAGCGCCGCGCGCGCTTCCCGCAACCCTGA MKTSPNILFIMADQMAAPLLPLHDPRSVLRMPHLSRLAERAVVFDSAYCNSPLCAPSRFTLVSGRLPTRIGAWDNAADFAADTPTYAHYLRNLGYRTALSGKMHFCGPDQLHGYEERLTSDIYPADYGWAVNWDEPEVRPSWYHNMSSVLQAGPCVRTNQLDFDEEVVFKARQYLYDHVRQHAGQPFCLTVSMTHPHDPYSIPASYWNLYRDEDIPLPRQRFAQEEQDPHSQRLLKVIDLWDKPLPEERIRAARRAYFGACSYVDAQIGALLATLEKCGLADDTIVVFSGDHGDMLGERGLWYKMHWFEMAARVPLLVHAPARFAPRRIGASVSTVDLLPTLVELAGGQVDPRLPLEGRSLLPHLRDGSGHDEVIGEYTAEGTLSPLMMIRRGDYKFIYSEQDPCLLYDLRNDPQERENLAASPAHRGTFEAFLDEARRRWDIPAITRAVLDSQRRRRLVAAALARGRLASWDHQPWVDASQQYMRNHIDLDDLERRARFPQP Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0032 CDS 34624 35538 + probable transcriptional regulator Class 3 NP_248722.1 15595230 49% similar to glycine cleavage system transcriptional activator protein GcvA [Escherichia coli] PS00044: Bacterial regulatory proteins, lysR family signature Transcriptional regulators Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] TIGR03418|chol_sulf_TF|putative choline sulfate-utilization transcription factor|hypoth_equivalog|1.1e-200||No Data|No Data PF03466|LysR_substrate, LysR substrate binding domain|92|300|1e-25 COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription]. ATGGGAGAACGCCTCATGCCGCTGTCCCTCGACCTGCTCCGGGTATTCGAGTCCGCCGCCCGCCAACTCAGCTTCACCGCTGCCGCCGAGGAACTGGGGACCACCCAGCCTGCGGTCAGCCAGCAGATCAAACGCCTGGAGAAAGAGCTGGCGACCCCTCTGTTCCAGCGCGTTCATCGAGGCATCGTGCTCACCGACGCCGGCCAGCTTCTGCTCCGCCACGTGGCCGCCGGCCTCGAGACGATCGATGCCGGCATCGCCGCGCTGGGCGCGCGCCAGCGCCACGAGGTGCTCCAGGTGGCCACCGACTACGCCTTCGCTGCCTACTGGCTGATGCCGCGCCTTCCGCGCTTCCATCAGGCCCATCCGCACCTGGACGTGAGCCTGGTGACCAGCGAGCGCGGCCTGGCCGGCCAGCGCGGCGATATCGACGTGGCGATCCTGTTCGGCGACGGTCGTTCCAAGCACGGCGAAGCGCACCGGCTGTTTCGCGAGGAGGTGTTCCCGGTCTGTAGCCCGCGGCTGGTCGAGGGATTGCAGTTGCCGCTGGCCAAGGCGCACCTGGCGCGCCTGCCGATGCTGCATCTGAAGCCGGCGCAGCACGCCCGCTGGTTCGACTGGCCGGCGTTGTTCGAAGCGTTGGCCATCGATCGGCAGCCGATTCCGGCGGTGCTCAGCTTCGACAACTACACCTTGCTGATCCAGGCGGCCATCGCCGGCCAGGGCGTGGCCATCGGCTGGCGCCACCTGGTCGACGGCCTGCTCGAACAGGGGCTGCTTTGCCGGCCCATTGGCGAGAGCTGCCTGTCGCGATACGGGTACTATGCGGTATTGCCGGAGCGCAAGCGGCGCCAGCGGCTGGTCGACGGTTTCGTCGACTGGCTACAGGCCGAGTTGCAGGCCGGCGGCGCTTGA MGERLMPLSLDLLRVFESAARQLSFTAAAEELGTTQPAVSQQIKRLEKELATPLFQRVHRGIVLTDAGQLLLRHVAAGLETIDAGIAALGARQRHEVLQVATDYAFAAYWLMPRLPRFHQAHPHLDVSLVTSERGLAGQRGDIDVAILFGDGRSKHGEAHRLFREEVFPVCSPRLVEGLQLPLAKAHLARLPMLHLKPAQHARWFDWPALFEALAIDRQPIPAVLSFDNYTLLIQAAIAGQGVAIGWRHLVDGLLEQGLLCRPIGESCLSRYGYYAVLPERKRRQRLVDGFVDWLQAELQAGGA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0033 CDS 35905 36270 - hypothetical protein Class 4 NP_248723.1 15595231 Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Unknown[Class 3] COG2198|ArcB, FOG: HPt domain [Signal transduction mechanisms]. ; COG2198|ArcB, FOG: HPt domain [Signal transduction mechanisms]. ; COG2198|ArcB, FOG: HPt domain [Signal transduction mechanisms]. ATGCGAACGTTCGACCTGACCGCCGCCCTGGGCGACCGCGCCAACCAACCGGAGATCAGCCGCCTGCTCGTCGCGCAGCTGATGACCAGCAACAACGAAGACACCCGCAAGCTGCGGCGCGCCCAGGAGCGCGAGCAGACCCAGGAACTCAACGAGCTGGCGCACCGCCTGGCGGGCATGGCCTCGCTGATCCACGCCCACGCCGTGGAACGCGCCTGCCACCAACTGGAGATCGCCTGCGGCGAAAGCTCCGTGCGCAAGCTCGCCGATGCCGTCGACGACCTGGTGACGGCACTGGGCGAGCTGCAATGCGAACTGCACGACTGGATGACGATGACCGCGCCTCAAGGCACGGCGAAGTCATAG MRTFDLTAALGDRANQPEISRLLVAQLMTSNNEDTRKLRRAQEREQTQELNELAHRLAGMASLIHAHAVERACHQLEIACGESSVRKLADAVDDLVTALGELQCELHDWMTMTAPQGTAKS Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0034 CDS 36278 36901 - probable two-component response regulator Class 3 NP_248724.1 15595232 PMID:92167813 ; PMID:1791760 75% similar to BvgA positive transcription regulator, putative [Bordetella pertussis] ; 86% similar to PUTATIVE TRANSCRIPTIONAL REGULATOR TrpO [Pseudomonas aeruginosa] PF00072: Response regulator receiver domain ; PF00486: Transcriptional regulatory protein, C terminal ; BL00622: Bacterial regulatory proteins, luxR family signature Two-component System [PseudoCAP] Transcriptional regulators ; Two-component regulatory systems Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0000160|two-component signal transduction system (phosphorelay)|IEA ; biological_process|GO:0006355|regulation of transcription, DNA-dependent|IEA ; biological_process|GO:0006796|phosphate metabolic process|IEA ; molecular_function|GO:0000156|two-component response regulator activity|IEA ; molecular_function|GO:0003700|transcription factor activity|IEA TIGR02154|PhoB|phosphate regulon transcriptional regulatory protein PhoB|equivalog|2.8e-05||Regulatory functions | Signal transduction|DNA interactions | Two-component systems PF00072|Response_reg, Response regulator receiver domain|4|115|2e-27 COG2197|CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]. ; COG2197|CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]. ; COG2197|CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]. ATGAGTAAGGTGCTGATCGTCGATGATCATCCCGCTATCCGCCTGGCCGTGCGCTTGCTGTTCGAGCGCGACGGTTTCACCATCGTCGGCGAGGCCGACAACGGTGCCGAAGCCCTGCAGGTAGCCCGCAAGAAGTCTCCCGACCTGGCCATCCTGGACATCGGCATCCCCAAGATCGACGGTCTCGAAGTGATAGCCCGCCTGAAGTCCCTGAAGCTGGACACCAAGGTCCTGGTCCTGACCCGGCAGAATCCGGCGCAGTTCGCCCCGCGATGCCTGCAGGCCGGCGCCATGGGCTTCGTCAGCAAAAGGGAAAACCTCTCCGAGCTGCTGCTCGCCGCCAAGGCCGTGCTGGCCGGCTACATCCACTTCCCCACCGGGGCGTTGCGCAGCATCAACCAGCAGAGCCGCGACAACGAGGCCCGCATGCTGGAAAGCCTTTCCGACCGCGAGATGACCGTGCTGCAGTACCTGGCCAACGGCAATACCAACAAGGCCATCGCCCAGCAGCTGTTCCTCAGCGAGAAAACCGTGAGCACCTACAAGTCACGCATCATGCTGAAACTCAACGCCCATTCCCTGGCCGGCCTGATCGATTTCGCCCGCCGCCACGAGCTGATCTGA MSKVLIVDDHPAIRLAVRLLFERDGFTIVGEADNGAEALQVARKKSPDLAILDIGIPKIDGLEVIARLKSLKLDTKVLVLTRQNPAQFAPRCLQAGAMGFVSKRENLSELLLAAKAVLAGYIHFPTGALRSINQQSRDNEARMLESLSDREMTVLQYLANGNTNKAIAQQLFLSEKTVSTYKSRIMLKLNAHSLAGLIDFARRHELI Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0035 CDS 37087 37893 - trpA tryptophan synthase alpha chain Class 1 NP_248725.1 15595233 PMID:88174343 ; PMID:3127651 trpABI (Pseudomonas aeruginosa) BL00167: Tryptophan synthase alpha chain signature Phenylalanine, tyrosine and tryptophan biosynthesis [PseudoCAP] ; phenylalanine, tyrosine and tryptophan biosynthesis, complete [PseudoCyc] ; tryptophan biosynthesis [PseudoCyc] ; pathways of chorismate [PseudoCyc] 4.2.1.20 Amino acid biosynthesis and metabolism Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0000162|tryptophan biosynthetic process|IEA ; biological_process|GO:0006520|amino acid metabolic process|IDA ; biological_process|GO:0006571|tyrosine biosynthetic process|IDA ; biological_process|GO:0009094|L-phenylalanine biosynthetic process|IDA ; molecular_function|GO:0003849|3-deoxy-7-phosphoheptulonate synthase activity|ISS ; molecular_function|GO:0004834|tryptophan synthase activity|IEA TIGR00262|trpA|tryptophan synthase, alpha subunit|equivalog|6.2e-80|4.2.1.20|Amino acid biosynthesis|Aromatic amino acid family PF01884|PcrB, PcrB family|189|251|1e-06 COG0159|TrpA, Tryptophan synthase alpha chain [Amino acid transport and metabolism]. ; COG0159|TrpA, Tryptophan synthase alpha chain [Amino acid transport and metabolism]. ; COG0159|TrpA, Tryptophan synthase alpha chain [Amino acid transport and metabolism]. ATGAGCCGCCTGCAGACCCGCTTCGCCCAGCTCAAGCAGGAAAACCGCGCCGCCCTGGTGACCTTCGTCACCGCCGGCGACCCGGACTACGCGTCTTCCCTGGAAATCCTCAAAGGCCTGCCGGCGGCCGGAGCCGACGTGATCGAACTGGGCATGCCGTTCACCGATCCGATGGCGGACGGCCCGGCCATCCAGTTGGCCAACATCCGCGCCCTGGACGGCGGCCAGACCCTGGCCAGGACGTTGCAGATGGTCCGCGAATTCCGCAGCGGCGACAGCGAGACGCCCCTGGTGCTGATGGGCTACTTCAACCCGATCCACCACTACGGCGTCGAACGCTTCATCGCCGAGGCGAAGGAGGTGGGAGTGGACGGCCTGATCGTGGTCGACCTGCCGCCGGAGCACAACGAAGACCTCTGCCACCCGGCCCAGGCCGCCGGCATCGACTTCATCCGCCTGACCACCCCGACCACCGGCGACCAGCGCCTGCCGACGGTGCTAGAAGGCAGTTCCGGGTTCGTCTACTACGTGTCGGTGGCCGGCGTCACCGGCGCCAACGCGGCGACCCTGGAACACGTCGAGGAAGCGGTGGCGCGCCTGCGCCGGCATACCGACCTGCCGATCGGTATCGGCTTCGGCATCCGCAGCGCCGAACACGCCGCCGCGGTCGCGCGGTTGGCCGACGGCGTGGTGGTCGGCTCGGCGCTGATCGACCGGATCGCCAAGGCCCGCGACAATGCCCAGGCGGTCAAGGATGTCCTCGCCCTGTGCGGCGAGCTGGCCGAAGGCGTGCGCAACGCACGCTGA MSRLQTRFAQLKQENRAALVTFVTAGDPDYASSLEILKGLPAAGADVIELGMPFTDPMADGPAIQLANIRALDGGQTLARTLQMVREFRSGDSETPLVLMGYFNPIHHYGVERFIAEAKEVGVDGLIVVDLPPEHNEDLCHPAQAAGIDFIRLTTPTTGDQRLPTVLEGSSGFVYYVSVAGVTGANAATLEHVEEAVARLRRHTDLPIGIGFGIRSAEHAAAVARLADGVVVGSALIDRIAKARDNAQAVKDVLALCGELAEGVRNAR Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0036 CDS 37890 39098 - trpB tryptophan synthase beta chain Class 1 NP_248726.1 15595234 PMID:88174343 ; PMID:3127651 trpABI (Pseudomonas aeruginosa) BL00168: Tryptophan synthase beta chain pyridoxal-phosphate attachment site Phenylalanine, tyrosine and tryptophan biosynthesis [PseudoCAP] ; phenylalanine, tyrosine and tryptophan biosynthesis, complete [PseudoCyc] ; tryptophan biosynthesis [PseudoCyc] ; pathways of chorismate [PseudoCyc] 4.2.1.20 Amino acid biosynthesis and metabolism Unknown[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0000162|tryptophan biosynthetic process|IEA ; biological_process|GO:0006520|amino acid metabolic process|IDA ; biological_process|GO:0006571|tyrosine biosynthetic process|IDA ; biological_process|GO:0009094|L-phenylalanine biosynthetic process|IDA ; molecular_function|GO:0004834|tryptophan synthase activity|IEA ; molecular_function|GO:0016833|oxo-acid-lyase activity|ISS TIGR00263|trpB|tryptophan synthase, beta subunit|equivalog|2e-294|4.2.1.20|Amino acid biosynthesis|Aromatic amino acid family PF00291|PALP, Pyridoxal-phosphate dependent enzyme|57|383|8e-76 COG0133|TrpB, Tryptophan synthase beta chain [Amino acid transport and metabolism]. ; COG0133|TrpB, Tryptophan synthase beta chain [Amino acid transport and metabolism]. ; COG0133|TrpB, Tryptophan synthase beta chain [Amino acid transport and metabolism]. ATGACTTCCTATCGCAACGGCCCCGACGCCAAGGGCCTGTTCGGCCGCTTCGGCGGCCAGTACGTCGCCGAGACCCTGATGCCGCTGATCCTCGACCTCGCCCGCGAGTACGAGAAGGCCAAGGACGACCCGGCGTTCCAGGAGGAACTGGCCTACTTCCAGCGCGACTACGTCGGTCGACCGAGCCCGCTGTACTTCGCCGAGCGCCTGACCGAGCACTGCGGCGGGGCGAAGATCTACCTCAAGCGCGAGGAGCTGAACCATACCGGCGCGCACAAGATCAACAACTGCATCGGCCAGATCCTCCTGGCCCGGCGCATGGGCAAGAAACGCATCATCGCCGAGACCGGCGCCGGCATGCACGGCGTGGCCACTGCCACCGTCGCCGCGCGCTTCGGCCTGCAGTGCGTGATCTACATGGGCACCACCGACATCGACCGGCAGCAGGCCAACGTCTTCCGCATGAAGCTGCTGGGCGCCGAGGTGATCCCGGTGACCGCCGGCACCGGTACCCTGAAGGACGCCATGAACGAGGCGCTGCGCGACTGGGTGACCAACGTCGACAGCACCTTCTACCTGATCGGCACGGTCGCCGGCCCGCATCCGTACCCGGCGATGGTCCGCGACTTCCAGGCGGTGATCGGCAAGGAAACCCGCGAGCAACTGGCCGAGAAGGAAGGGCGCCTGCCCGATTCGCTGGTCGCCTGCATCGGCGGCGGCTCCAACGCCATGGGCCTGTTCCACCCGTTCCTCGACGACGCCGGGGTGCAGATCGTCGGCGTGGAAGCCGCCGGCCACGGCATCGACACCGGCAAGCACGCGGCCAGCCTGAACGGCGGGGTTCCCGGCGTGCTGCACGGCAACCGCACCTTCCTGCTGCAGGACGCGGATGGCCAGATCATCGACGCACACTCCATCTCCGCCGGCCTCGACTATCCCGGCATCGGCCCGGAACACGCCTGGCTGCACGACACCGGCCGCGTCGAGTACACCTCGATCACCGACGACGAAGCCCTGGAGGCCTTCCACACCTGCTGCCGCCTCGAAGGCATCATCCCGGCACTGGAAAGCTCCCATGCCCTGGCCGAGGTCTTCAAGCGTGCGCCCAGCCTGCCCAAGGAGCACATCATGGTGGTGAACCTGTCCGGTCGCGGCGACAAGGACATGCAGACCGTCATGCACCACATGCAACAGGAGTCGAAAGCATGA MTSYRNGPDAKGLFGRFGGQYVAETLMPLILDLAREYEKAKDDPAFQEELAYFQRDYVGRPSPLYFAERLTEHCGGAKIYLKREELNHTGAHKINNCIGQILLARRMGKKRIIAETGAGMHGVATATVAARFGLQCVIYMGTTDIDRQQANVFRMKLLGAEVIPVTAGTGTLKDAMNEALRDWVTNVDSTFYLIGTVAGPHPYPAMVRDFQAVIGKETREQLAEKEGRLPDSLVACIGGGSNAMGLFHPFLDDAGVQIVGVEAAGHGIDTGKHAASLNGGVPGVLHGNRTFLLQDADGQIIDAHSISAGLDYPGIGPEHAWLHDTGRVEYTSITDDEALEAFHTCCRLEGIIPALESSHALAEVFKRAPSLPKEHIMVVNLSGRGDKDMQTVMHHMQQESKA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0037 CDS 39202 40089 + trpI transcriptional regulator TrpI Class 1 NP_248727.1 15595235 PMID:90192175 ; PMID:2107533 trpABI (Pseudomonas aeruginosa) 97% similarity to TrpI protein [Pseudomonas aeruginosa] BL00044: Bacterial regulatory proteins, lysR family signature Amino acid biosynthesis and metabolism ; Transcriptional regulators Cytoplasmic[Class 2] ; Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0006355|regulation of transcription, DNA-dependent|IDA ; biological_process|GO:0006520|amino acid metabolic process|IDA ; molecular_function|GO:0030528|transcription regulator activity|IDA TIGR03418|chol_sulf_TF|putative choline sulfate-utilization transcription factor|hypoth_equivalog|7.7e-31||No Data|No Data PF03466|LysR_substrate, LysR substrate binding domain|96|294|1e-13 COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription]. ATGAGCCGCGACCTGCCCTCCCTGAATGCCCTGCGCGCTTTCGAAGCCGCTGCCCGGTTGCACAGCATCAGCCTGGCGGCCGAGGAACTGCACGTTACCCATGGCGCCGTGAGCCGGCAGGTGCGGTTGCTCGAGGACGATCTCGGGGTGGCCCTGTTCGGCAAGGATGGGCGCGGCGTAAAACTCACCGATTCCGGCGTTCGCCTGCGTGACGCCTGCGGCGATGCGTTCGAGCGACTGCGTGGCGTCTGTGCCGAGCTGCGCCGGCAGACCGCCGAGGCCCCGTTCGTCCTCGGCGTACCCGGCAGCCTGCTGGCGCGCTGGTTCATCCCGCGGCTGGACCAGCTCAACCGTGCCCTCCCCGACCTGCGCCTGCAACTGTCCACCAGCGAGGGCGAGTTCGATCCGCGTCGTCCCGGCCTGGACGCCATGCTCTGGTTCGCCGAGCCGCCCTGGCCGGCGGACATGCAGGTCTTCGAACTGGCGCCCGAGCGCATGGGCCCGGTGGTCAGCCCGCGCCTGGCGCAGGAAACCGGCCTGGCCCAGGCGCCCGCCGCGCGGCTGTTGCAGGAGCCGCTGCTGCATACCGCCTCGCGACCCCAGGCCTGGCCGGCCTGGGCCGCGAGCCAGGGGCTGGCGGCGGAGGCGCTGCGCTATGGCCAGGGGTTCGAGCATCTCTACTACCTGCTGGAAGCGGCGGTGGCGGGCCTCGGCGTGGCCATCGCCCCGGAGCCGCTGGTCCGCGACGATCTCGCCGCGGGCCGCCTGGCGGCGCCCTGGGGCTTCATCGAGACCGATGCGCGCCTGGCCCTGTGGGTACCGGCACGCCTCCACGATCCGCGTGCCGGGCGCCTGGCGCAATGGTTGCGGGAGCAGTTGGCAGGCTGA MSRDLPSLNALRAFEAAARLHSISLAAEELHVTHGAVSRQVRLLEDDLGVALFGKDGRGVKLTDSGVRLRDACGDAFERLRGVCAELRRQTAEAPFVLGVPGSLLARWFIPRLDQLNRALPDLRLQLSTSEGEFDPRRPGLDAMLWFAEPPWPADMQVFELAPERMGPVVSPRLAQETGLAQAPAARLLQEPLLHTASRPQAWPAWAASQGLAAEALRYGQGFEHLYYLLEAAVAGLGVAIAPEPLVRDDLAAGRLAAPWGFIETDARLALWVPARLHDPRAGRLAQWLREQLAG Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0038 CDS 40190 40405 + hypothetical protein Class 4 NP_248728.1 15595236 Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] PF07311|DUF1458, Protein of unknown function (DUF1458)|5|70|5e-27 COG3360|COG3360, Uncharacterized conserved protein [Function unknown]. ; COG3360|COG3360, Uncharacterized conserved protein [Function unknown]. ; COG3360|COG3360, Uncharacterized conserved protein [Function unknown]. ATGTCCAATCACCACACCTACAAGAAGATCGAACTGGTCGGCTCGTCCAAGACCAGCATCGAGGACGCCATCAACAACGCCCTCGCCGAAGCGGCGAAGAGCATCCAGCATCTGGAATGGTTCGAGGTGGTGGATACCCGCGGGCACATCGAGAACGGCGCCGTCGGCCATTACCAGGTGACCCTGAAAGTAGGGTTCCGTATCGCCAATAGCTGA MSNHHTYKKIELVGSSKTSIEDAINNALAEAAKSIQHLEWFEVVDTRGHIENGAVGHYQVTLKVGFRIANS Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0039 CDS 40589 40816 + hypothetical protein Class 4 NP_248729.1 15595237 PMID:15687295 57% similar to hypothetical protein YnfD [Escherichia coli] type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 21) ; type I export signal computationally predicted by Phobius (cleavage after residue 21) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 21) Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] PF06649|DUF1161, Protein of unknown function (DUF1161)|4|75|3e-26 GTGTTCATGAAGAAGTTGATGTTGGCAGTCGGCCTGTTTGCCGTGGCGGGCAGCGCATTCGCCGCCAAGCCCTGTGAGGAACTGAAAGCCGAGATCGATGCGAAGATCAAGGCCAACGGCGTTCCTGCCTACACCCTGGAAATCGTCGACAAGGGCAGCGTCACCGACAAGAAGGTAGTCGGCACCTGCGACGGCGGCACCAAGGAAATCGTCTACCAGCGCGGCTGA MFMKKLMLAVGLFAVAGSAFAAKPCEELKAEIDAKIKANGVPAYTLEIVDKGSVTDKKVVGTCDGGTKEIVYQRG Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0040 CDS 41113 42801 + conserved hypothetical protein Class 4 NP_248730.1 15595238 PMID:90170827 ; PMID:15687295 ; PMID:2407716 48% similar to hemolysin activator protein HpmB precursor [Proteus mirabilis] type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 19) ; type I export signal computationally predicted by Phobius (cleavage after residue 19) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 19) Hypothetical, unclassified, unknown Outer Membrane[Class 3] ; Outer Membrane[Class 3] PF03865|ShlB, Haemolysin secretion/activation protein ShlB/FhaC/HecB|163|475|4e-48 COG2831|FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion]. ; COG2831|FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion]. ; COG2831|FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion]. GTGGCTCTCCATCGCCTGGCCTTTATCTTCCTGTGCCTGCCGCTCATGGCCAGCGCCGCCCCCTTCACCTCCCCCGGCGACCGCGACCTGATCCGCGACCGCCAGCAGCGCCTGCTGGACGAACAGCGCAAGCGCCTGGAGGAACTCCAGCAACTGCCCGGCAAGGGAGCGCCCGCCGCTGCGGATGCCTCCGGCGGCGACGAGCGCTGCTTCGAGATCCGCCGCATCGAGCTGGAAGGCGCCGGGCACCTCGGCGAAAGCGCGCGTCGCCAGTTGCTGGCGCCCTACCAGGGGCGCTGCCTGGGCGTCGGCCAGCTCAATGCGCTGCTCAAGGCCGTCACCGACCATTACCTGGATCGCGGCTACGTCACCACCCGTGCCTACCTGCCACAGCAGGACCTGGCCTCCGGGACCCTGCGCATCATCGTCGTCGAAGGCCGCCTGGAGGGCCTGGACAGCTCCGCGCTGGCCAGCCCGCGCGAACTGACGATGAGCTTTCCGGGCAGGACCGGCGAGTTGCTCGACCTGCGCGAGCTGGAGCAACTGGTCGACCAGTTGAGCCGCCTGCCGTCGCGCCAGGCGCAACTGGAGCTGGTGCCCGGCAGCGAGGTCGGCGGCAGCCGGGTGCGTCTCAAGGGCGAGCGCGACAAGCCCTGGCGGGTCTCCGCCACGCGCAACAACGACGGCGACGTCAGCACCGGCGAGCAGCAGATGGGCCTGGGCCTGGACTGGGACAGCCCGCTGGGCCTGGCCGACCAGCTCAACCTGCGCGCCAACCGCGACGCGGTGACCGACCGCTGGCGCCATTCCGACAGCCAGAGCCTGTTCTACAGCCTGCCCTGGGGCTGGTGGACCTTCACCTACGGCTACAGCCAGAGCGACTACCGCACGCGCAACGAGGCCAGCGGCTTCCCCTTCAAGCTCGATGGCGACAGCCGCAGCCACCAGTTCCGCGCCGAACGCGTGCTGCACCGCGACGGTGTGAGCAAGACCGCCATGAGCCTGGGGCTCAGCCACCAGCGCACCAACAACTATGTCGAAGACACCCGCCTGGAAGACCAGAGCACGCGGATCACCGAGACCCAGCTCGGCTTCAACCATGGCCGGCGGATCGGCAGCGGCTTCGTCAACCTCGACCTCGGCTGGCAGCAGGGCATCGGCGCCCTTGGCGCGCAGGGTCGCGGCCACCCGCAGGCGGGCGATCCGAATGCGCGCTACGACAAGTACAGCCTGACCCTCAGCTACCTGCAGCCGTTCCAGCTATGGGGCGAGCGCTTCAGCTTCGACAGCCTGGCCACCGGGCAGAGGAGCGAGGACGTGCTGTTCAGCCCGCAGCGCATCAGCCTCGGCGGCAACAGCTCGGTGCGCGGCTTCAAGGACCAGACCCTGACCGGCGACAGCGGCGGCTACTGGCGCAACCAGTTGCGCTGGCGGCGCGCGGTGGAGTGGGCGCCGCTGCGGCCCTGGCTGCAGGAATACGGCGTGGCCTTCGCCTACGACGTCGGCGTGATCCGCCACGACCGCTACAACGACGGCGCCAGCGGGCGCATGAGCGGCAACGCCATCGAACTGGATGCCCGCGGCCGCTATTTCGCCGCCAGCGTCGGCTTCGCCCGCTCGCTGGAGCGGCCCAGCGCCATCGAGCGGCGCGAGCACCCGATCTATTTCCGGGTCGACGCGTTCTTCTGA MALHRLAFIFLCLPLMASAAPFTSPGDRDLIRDRQQRLLDEQRKRLEELQQLPGKGAPAAADASGGDERCFEIRRIELEGAGHLGESARRQLLAPYQGRCLGVGQLNALLKAVTDHYLDRGYVTTRAYLPQQDLASGTLRIIVVEGRLEGLDSSALASPRELTMSFPGRTGELLDLRELEQLVDQLSRLPSRQAQLELVPGSEVGGSRVRLKGERDKPWRVSATRNNDGDVSTGEQQMGLGLDWDSPLGLADQLNLRANRDAVTDRWRHSDSQSLFYSLPWGWWTFTYGYSQSDYRTRNEASGFPFKLDGDSRSHQFRAERVLHRDGVSKTAMSLGLSHQRTNNYVEDTRLEDQSTRITETQLGFNHGRRIGSGFVNLDLGWQQGIGALGAQGRGHPQAGDPNARYDKYSLTLSYLQPFQLWGERFSFDSLATGQRSEDVLFSPQRISLGGNSSVRGFKDQTLTGDSGGYWRNQLRWRRAVEWAPLRPWLQEYGVAFAYDVGVIRHDRYNDGASGRMSGNAIELDARGRYFAASVGFARSLERPSAIERREHPIYFRVDAFF Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0041 CDS 42914 53521 + probable hemagglutinin Class 3 NP_248731.1 15595239 PMID:89202384 ; PMID:12724392 ; PMID:15687295 ; PMID:2539596 43% similar to regions of filamentous hemagglutinin [Bordetella pertussis] type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 28) ; type I export signal computationally predicted by Phobius (cleavage after residue 26) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 28) Secreted Factors (toxins, enzymes, alginate) Extracellular[Class 1] ; Outer Membrane[Class 3] ; Outer Membrane[Class 3] TIGR01731|fil_hemag_20aa|adhesin HecA family 20-residue repeat (two copies)|repeat|0||No Data|No Data PF04830|DUF637, Possible hemagglutinin (DUF637)|2969|3138|2e-39 ATGGACATCCGCAGCCCGCTGAACCAGTGCATCGCCCTGTCCCTGGCCGGCATCTTGTTCCTCAACCCGATCGTCGCCGCGGCGGCGGGGCTGGCGCTGGACAAGGCCGCCGGCGGCAACACCGGCCTGGGCCAGGCGGGCAACGGCGTGCCCATCGTCAATATCGCCACGCCCAACGACGCCGGGCTGTCGAACAACCATTTCCGCGACTACAACGTCGGCGCCAACGGGCTGATCCTCAACAACGCTACCGGCAAGACCCAGGGTACCCAGCTCGGCGGGATCATCCTCGGCAACCCCAACCTCAAGGGCCAGGCGGCGCAGGTGATCCTCAACCAGGTCACCGGCGGCAACCGCAGCACCCTGGCCGGCTACACCGAGGTGGCCGGGCAGTCGGCGCGGGTGATCGTCGCCAACCCGCACGGCATCACCTGCCAGGGCTGCGGCTTCATCAACACGCCGCGCGCGACCCTCACCACCGGCAAGCCGATCATGGACGGCCAGCGCCTGGAGCGCTTCCAGGTGGACGGCGGCGACATCGTCGTCGAAGGCGCCGAACTGAACGTCGGCAACCTCGAACAGTTCGACCTGATCACCCGCAGCGCCAAGCTCAACGCCAAGCTCTACGCGAAGAACCTCAACATCGTCACCGGCCGCAACGACGTCCAGGCCGACAGCCTGCAGGCCACGCCGCGCGCCGCCGATGGCAGCGAGAAGCCGCAGCTGGCGATCGACAGCTCGGCGCTGGGCGGGATGTACGCCGGGGCGATCCGCCTGGTCGGCACCGAGCAGGGCGTGGGGGTGCGGCTGGCCGGCGACATGGCCGCCAGCGGCGGCGACATCCGCATCGACGCCAGCGGCAAGCTGAGTCTGGCCCAGGCCTCCAGCCAGGGCGACCTGAAGATCGCGGCCCAGGCCGTGGAGCTGAATGGCAAGACCTACGCCGGCGGCAGCGCCGAGATCCGCAGCGCGGAGGAACTGGTCAACCGGCAGAGCCTGGCGGCGCGCGAACGCATCGTGCTGGAGGCGGCGCATATCGACAACGCCGGGGTGATCGAAGCCGGCGTCGAGCCAGACGAGCGACGCAACGCGCGCGGCGACCTCGAGCTGCGCAGCGGCACCCTGCGCAACGCCGGCAGCCTGGTGGCCAGCCGCGCGCTGGAAGCGAAGGCGAGCCAGGCGCTGGACAACCAGGGCGGCAGCCTGAAGGGGGCGACCGTCCGGGTCGACGCCGGGCACCTGGACAACCGTGGCGGCAAGCTGCTCGCCGAGGGCGAACTGCGGGTCGAGGCGAGCAGCCTGGACAACCGCCAGGACGGCCTGTTGCAGAGCCGGGACCGCGCCGTGGTCAAGACCCGTGGCGATCTCGACAACCGTGGCGGCCAGGTGATCGGCCTGAACGATCTGGAGGTCGGCGCGGCGACGCTCGACAACGGCCAGCAAGGCCTGCTCGGCAGCCAGCAGTCCACCCGCGTCAGCGCCCAGGCGCTGGTCAACCGGGGGGACGGCGAAGTCTCCGGCAAGCGCGTCGAGGCTCGCGTCGGTAGCCTCGACAATCGCGGCGGCAAGCTGATCGGCGACGACCTGCTGGTGGTCGCCAGCGGTGCCATCGACAACCGCCTCGGCTTGTTCTCCGCAGCCAACCGCCTCGACCTGCGGGCGCGCAGCCTGGACAACAGCGGCAAGGGCACGCTGAGCAGCCGGGGCGGCCTGGAGGTCAGCCTCGGCGGCCTGCTGGACAACCGCGATGAAGGCAACCTGCTCAGCCAGGGCGCGCAGCGCGTGACGGTGGGGCAACTGGACAACCGCGCCGGCGGCCTGCTGTCGAGCCGCAGCGAGTTGAACGTCCACGGCGCCAGCCTGGACAACCGTGGCGGCGTGCTGGTGGCCGACGCCGGCCTGAGCGCCACGGGAGGCGCCTTCGACAACCGCGACGGCGGCAGCGCCAGCGGCAAGGCTGGCGTGCGCGTGGAGGTCGCCAGCCTGCGCAACGACCAGGGTGGCAAGCTGCTCAGCGATGGCCGCCTGGACCTCGCAGCGAACGCCGTCGGCAACGCCGGAGGGCGTATCGCCGCCAAGGGCGACCTGCAGGCGACGCTTGGCAGCCTGGCCCAGCAAGGTGGCGAACTGGTCAGCGAAAAGACCCTGAAGGTCGCGGCCGACACGCTCGACAACAGCCAGTCCGGGCTGATCGCCGCGAATGGCGGCATCGCTATCGAGGCGCGGCAGGTCGACAACCGCGCCGGCGAGATTTCCAGCACCTCGAAGGTCGCCGTGAACGCCCGCGAGCAACTGGACAACCGCGGCGGCAAGGTCATCGGCGACAGCGGCCTGCGCCTCACCGTGCAGCGCCTGCTGAACCAGGCCAAGGGGGTGCTGGCCGGGCGCGACGGCCTGAGCCTGGACGGCGGCGAACTGTTCAACGGCGACGGCGGTCGGCTCGACAGCCAGAACAGCCTGAGCGTGAGCCTCGGCGGCGTGCTGGACAACCAGGGCGGCGCGCTGGTCAGCGAAGGCAGCCTGACGGCGCGCGCCGCGCGCCTGGACAACCGTGGCGGGACCTTCTCCAGCGCCGGTGCGCTGGCGCTGACCAGCCAGGCCGCGCTGGACAACCAGGGCGGCAGGCTGCTCAGCGATGCCGGCGTGACGCTGCAGGGCGCCAGCCTCGACAACAGCCGTTCCGGCGTGATCAGCGCCAAGGGCGCGGTGGATATCCGCACCGGCGTACTGGACAACAGCCGCAACGGCGGCATCGGCAGCAACGCCGGCATCACCCTGGTGGCCGCCCGGCTGGACAACGGCCAGCAGGGCCGGGTCAGCGCCAAGGGCCTGCTCGACGCCAACCTGAAAGGCCTCGACCAGCGCGGAGGCGGCGTCCTGATCAGCGAAACCGGCGTCACCCTCGACCTCAATGGCGGCACGCTGGTCAACCGCGACGGCGGCCTGATCGCCACGCCCGGCGCGCTGCTGCTGCGCCAGCTCGGCGCGGTGGACAACGGCGCCGGCGGGGAAATCTCCAGCGACCGCGCCTTCACCCTCGCCGCCGCCAGCCTGGACAACCGCGGCGGGCGCCTGATCGGCGCCGCCAACCTGACCCTGCGCATCGCCCAGGCCCTGGACAACAGCCTGGCCGGGGTGATCTCCGGCGCCGCCGGCCTGGACATCGCGGCCGCTCGCCTGGACAACAGCGCCAAGGGCACCCTGGCCAGCCGCGCCGGCATCGACCTGCGCGTCGATGGCGCGCTGGACAACCACGCCGAAGGCACCGTCTCCGGCGCCCGCCTGACGCTCGCCAGCGCCTCGCTGGACAACAGCGGCAAGGGCCTGCTCTCCGGCAACGCCGGCCTGAGCGTCGCCACTGGCGCGCTGGACAACGCCGAGGGTGGCCAGTTGATCAGCCAGGGCGTCCTGGACGTCAGCAGCGCCGACCTCGACAACCGTGGCGGCGCCCTCAGTGGCAAGCAGTCGCTGCGCCTGAGCGCCGCCAACCTGGACAACCGTGGCGGCCTGCTCACCAGCGACGGCGAACTGGAACTGACGGCAGGGCGCGTCGATTCCGCCGACGGCGGCGAAATCTCCGCCCGGGGCGACCTGCGCCTGACGGTCGAGCGCCTGGTGCAACGCCAGGGCCGGCTGGTCGGCGAGCGCGGCGTCAGTCTCGACCTGCGGGGCGGCGACCTGGACAACCAGGGCGGCCTGATCAGTGCCCGCGGCCCGCTGAGCATCGAGCGGCTGAGCGTCCTCGACAACCGCCAGGGCGGCGAGATTTCCAGCCAGCAGGGCTTCGAGCTGCTGGCCAGGCGCATCGACAACGGCCAGCAGGGGCGCATCATCAGCGCCGGGAAACTGCGCCTAGACGCCGACGCGCTGGGCAACGCCGGCGCCGGCCTGCTCTCCGGATGGCAGGGCCTGACGGTGACAGGCGGGAGCCTGGACAACAGCGCCGGCGGCACCCTTTCGAGCAAGGACGGCGAGCTGGCCATCAGCCTCGGCGGCGCGCTGGACAACCACGGCCAGGGCGCGCTGGTCAGCAAGGGCGCGCAACGGATCGACGCCGCCAGCCTGGATAACGCCCAGGGCATTGTCTCCGGCGAAAGCGACGTGACCCTGAGCATCGCCGGGAAGCTGGACAACGGCCAGGGCGGCCTGGTCTCGGCGCAGCGCGCGCTGAGCTTCGAGCGCGACGATACGCTGCTGAACAACGCCGGCGGCCGGATCAACGGCGGCAGCCTGCTGCTCAAGGGCGCCAGCCTGGATAACAGCGACGGCCAGTTGATCAGCCAGGGCCGGCTCGACGCCATCCTCGGCGGCGCCCTGGTCAACACCGGCGCGGCGCGCCTGGCCAGCGGCGGCGACCTGCTGCTGCGCAGCGCCAGCGTCGACAACCGCGGCGGCAAGCTGGTCAGCCAGGGGCTGCTGGAGATCAGCGCCGGCAGCCTCGACAACAGCGCCTCCGGCACCCTCGCCAGCCAGGCCGGCATGAGCCTGCGCCTGGGCGGCGGCGCCCTGCGCAACCAGCAGGACGGCCTGATCTTCAGCCAGGCCGGCGCCCTCGATGTGCAGGCCGGCAGCCTGGACAACCGCCAGGGCACGCTCCAGGCCCAGGGCGACAACCGGCTGCGTATCGGCGGCGCGCTGGACAACCAGGGCGGCCGCCTGGACAGCCGGGCCGGCAACCTCGACCTGCAGAGCGGCAGCCTCGACAACGGCGCCGGCGGCGTGCTCAACAGCGCCAAGGGTTGGCTGAAGCTGGTCACCGGGCTGTTCGACAACAGCGCCGGCGTCACCCAGGCGCAGTCGCTGGAGATTCGCGCCGGGCAAGGCGTGCGCAACCAGCAGGGCCACCTCTCGGCGCTGGGCGGCGACAACCGCATCGTCACCGCCGACTTCGACAACCAGGGCGGCGGCCTCTACGCCAGCGGCCTGCTCAGCCTCGACGGCCAGCGCTTCCTCAACCAGGGCGCGGCGGCGGGCCAGGGCGGCAAGGTCGGCGCCGGGCGCATCGACTTCAGCCTGGCCGGCGCGCTGGCCAACCGCTTCGGCCAGTTGGAAAGCGAAAGCGAGCTGCACCTGCGCGCCGCCGCGATCGACAACAGCGGCGGCAGCCTGCGCGCCCTCGGCCGCAGCGGCAGCACGCGGTTGGTCGCTGGCGGCCTGAACAACGCCTACGGCGTGCTGGAAAGCGCCAACCAGGACCTCGACCTGCAACTGGGCAGCCTGGCCAACGCCGGTGGGCGCATCCTCCACACCGGCAATGGCACCTTCGGCCTGGATTCCGGGCAGGTGATCCGCGCCGGCGGCGAACTGACCACCAATGGCCTGCTGGACATCCGCGCCAGCGAATGGACCAACAGCAGCGTGCTGCAAGCCGGACGCCTGAACCTGGACATCGGCACCTTCCGCCAGACGGCCGAGGGCAAGCTGTTGGCGGTGCAGTCCTTCACTGGCCGCGGCGGCGACTGGAGCAACGACGGCCTGCTGGCCAGCGACGGCAGCTTCCGCCTCGACCTGAGCGGCGGCTACCGTGGCAACGGCCGCGCCACCAGCCTCGGCGACTTCGCCCTGAACGCCGCCAGCCTCGACCTCGGCAACGCCGCCAGCCTCGCCGGCGGTGCCAATGTCACGCTCGGCGCCGGCAACCTGCTGGTCAACCGTGGGCGGATCACCGCCGCCGGCGACCTCGTGGCCAGCGCCGCGAGCCTGAACAACTACGGCACCCTGGGCGGCGGCGGCAACCTGCGATTGAACGCGCCCGCCCTGCTCAACGAGCGCGGGTTGCTGTTCAGTGGCGCCGACATGACCCTGCGCGCCGGCGACATCACCAACCTCTACGGGGATGTGTACAGCCTCGGCAGGCTGGATATCGCCCGCGACGATGCGGGCAACCGTGCCGCCAGCCTGCGCAACCTTTCCGGGGTGATCGAGAGCGGCAAGGACTTCAGCCTGCGTGCCAGCCTGATCGAGAACCGTCGCGCCGTGCTGGAAAGCAAGTCGGGCCTGTACACCGCGAAGATGGAGCAGACCGCCTGCATCGAAGGCGTCAACGCGGGCGACTGCAGCGGCAAGCGCAACGCCATCTGGACCATCACCCAGCGCGACAAGACCGAGGTCACCGCCAGCAGCGCCATGGGGCAACTGCTGGCCGGAGGCGACTTCGCCATCGACGGCGGCACCCTGAACAACCTTTCCAGTCTGATCGGCAGCGGCGGCAACCTCACCGCCAACCTCGAAGTCCTCGACAACCAGGGCCTGGAAACCGGCGAGCTGGAAACCATCCGCGTGCTGCGTACCGCTCGCGGCGGCGATATCGGCGGCATCGACCAGAAGTCGCGCAACTTCACCAACCTCTACTGGTACCAGAGCGCCAATTTCGACCCGGCGCGCGCGGGCGAGATCCCCGCCGCGCTCAACGCGATCCTCAGCGACTGGTCCTTCGAGTACGAATTCCCGAGCAAGGGGCCGACCCCGATCAGCAGTGGCGACCAGTCCTACGCAGCGGTGATCCAGGCCGCCGGCGACGTCACGGTCAATGCCAGCACGCGCATCGACAACGGCGTCACCCGCCCCGGCTACACCTTCGTCGGCAGCGGCCGCCAGGTGGGCGACAGCGCGGTGGGCGGCAGCGGGGTTTCGGTGGTCGTGCCGCTGACCTCGCAACTGCCGCCCGACCTGGCGCGGCGCCAGGTCAACCCGGTTACCCTGCCCGGCTTCAGCCTGCCCCAGGGTGACAACGGCCTGTTCCGTCTCAGCTCGCGCTTTGCCGAGGACGGCAATGGCAGCGCCGCGCTCGGTGCCGGCGCCGACCGCACCCAGGGCGGTAGCGGCGTCTCGGTCGGCCAGCAAGGCGCCGGCAACGCCGCCGGTACCTGGCAGGGCCAGGGCGTGCGAGTCGACGGCCTGGCTGGCGCGGCCAACGTCCAGGGTCAGGGCGGCAGCACGCTCGGCGGTAGCCTGCCGGGCGTCGCCCGGGTCCAGGGCGTGCCCGGCAACGCCACGCCGAGCGCCAGCCACAAGTACCTGATCGAGACCAACCCGGCGCTCACCGAACTGAAGCAGTTCCTCAACTCGGACTACCTGCTCAGCGGCCTGGGCATGAACCCGGACGATAGCAAGAAGCGTCTCGGCGACGGTCTCTACGAGCAGCGGCTGATCCGCGACGCGGTGGTGGCGCGCACCGGCCAGCGCTACATCGACGGGCTGAGCAGCGACGAGGCGCTGTTCCGCTACCTGATGGACAACGCCATCGCTTACAAGGACCAACTGCACCTGCAACTGGGTGTGGGCCTGAGCGCGGAGCAGATGGCGGCGCTGACCCACGACATCGTCTGGCTGGAAGAGGTCGAGGTGAACGGCGAGAAGGTCCTCGCGCCGGTGGTCTACCTGGCCCAGGCGGAGGGTCGGCTGGCACCCAACGGTGCGCTGATCCAGGGCCGCGACGTGAAGCTGGTGAGCGGCGGCGACCTGCATAACGTCGGCACCCTGCGCGCGCGGAACGACCTCTCGGCGACGGCCGACAACCTCGACAACAGCGGCCTGATCGAGGCCGGCAAGCGCCTCGACCTGCTCGCCGGCGACTCGATCCGCAACCGCCAGGGCGGGGTCATCGCCGGGCGTGACGTGAGCCTCACCGCGCTGACCGGCGACGTAATCAACGAACGCAGCGTGACCCGCTACGACAGCGCGCTCGACGGCCGCACCTGGGAACGCAGCTTCGCCGACAGCGCCGCGCGGGTGGAGGCGGCGAACAGCCTGAACGTCCAGGCCGGACGCGACATCGCCAACCTCGGCGGGGTGCTGCAGAGCCGCGGCGACCTCAGCCTCGACGCCGGACGCGACGTCACCGTCGCCGCCGTCGAGGACCGCCAGGGCCAGACCCGCTGGAGCACGTCGCGGCTCCAGAGCGTGACCCAGCTCGGCGCCGAAGTCAGCGCCGGGCGGGACCTGAACGTCAGCGCCGGCCGCGACTTGACGGCGGTGGCCAGCACCCTCGAAGCGCGCCGCGACATCGCCCTCTCCGCCGGGCGCGACGTGACCCTGGCGGCGGCGGCGAACGAGGAGCATGCCTACAGCAAGACCAGGAAGGTCACCTACCAGGAAGACAAGGTCGCCCAGCAAGGCACCCGCGTGGACGCCGGCGGCGACCTGGCGATCAATGCCGGACAGGACCTGCGCCTGATCGCGAGCCAGGCCAGCGCCGGCGACGAGGCCTACCTGGTGGCCGGCGACAAGCTGGAACTGCTGGCCGCCAACGACAGCAACTACTACCTGTACGACAAGAAGAAGAAAGGCGACTTCGGCCGCAAGGAAACCCGGCGCGACGAAGTCACCGACGTCAAGGCGGTGGGCAGCCAGATCAGCAGCGGCGGCGACCTCACCCTGCTCAGCGGCGGCGACCAGACCTACCAGGGCGCGAAGCTGGAATCGGGCAACGACCTGGCCATCGTCAGCGGCGGCGCGGTGACCTTCGAGGCGGTGAAGGACCTGCACCAGGAAAGCCACGAGAAGAGCAAGGGCGACCTGGCGTGGAACAGCGCCAAGGGGAAAGGGCAGACCGATGAAACGCTTCGGCAGACCCAGATCGTGGCCCAGGGGAATCTGGCGATCAAGGCCGTGGAAGGGCTGAAGATCGACCTCAAGCATATCGACCAGAAGACCGTAAGCCAGACCATCGACGCGATGGTGCAGGCGGATCCGCAACTGGCGTGGCTGAAGGAGGCCGAGCAGCGCGGGGATGTGGACTGGCGCATGGTGCAGGAGGTGCACGATAGCTGGAAGTACAGCAACTCGGGCATGGGGCCGGCGACGCAGATCGCTGTCGCCATCGCGGCGGCAGCCATCGGTGGCATGGCGGCAGCGGGAGCGCTCAGTGGTGCAGGAGTGGGTGCCAGTAGCTTCGCCATGGGCGCAGGAGTTGGTGCGGCAGGAAGCCTGTCGGGCACGGCAGCGGTCAGCCTGATCAACAACAAGGGCGATCTCGGGAAGGTGCTGAAAGACAGCTTCAGTAGTGACAGTCTGAAGCAGATTGCTATTGCGAGCCTGACCGGGGGGCTGACGGCTGAGTACTTCGACGGGATTCTTCAGACCAAGACTGATCCGCTTACTGGAAAGGTCACGGTAGACCTCAGCAGCCTATCTGGTGTTGGTCGCTTCGCTGCCAATCAGGCGATGCAGAACGCTACATCCACTGTACTGAGCCAGGCCTTGGGCCAGGGCGGGAGCCTGAACGAGGCGCTGAAGAGCGCGCTCTACAACAGTTTCGCGGCGGCAGGTTTCAACTTCGTCGGCGATATCGGCCAGGAATACAGCCTGAAGCCAGGCGATCCTTCGATGGTGACCATGCACGCCCTGATGGGTGGCCTGGCGGCGCAGGTCAGCGGTGGCGATTTCGCCACGGGCGCCGCGGCGGCTGGCGCCAATGAAGCGCTGGTGGCCAAGCTAGACCAGGCCTTCAAGAGCTTGAGCCCTGAGAACCGTGAAGCCATGGTCACTATGGGGTCGCAATTGGTTGGTGTTCTGGCTGCGGCGGTACGCGATCCTGATGTGACAGGCAAAGCTCTGGAAAGCGCTGCTTGGGTAGCGAAGAACTCGACGCAATACAACTTCCTCAACCATCAGGATGTGGCCGATCTGGATAATGCCTTGCAGAAATGCAAGTCCCAGGGAAATTGCCGTCAGGTAGAGGAAGAGTTCAAGGCGCGTAGCGACGAGAACCGGCGGAGGTTGAATGGCTGCGTGGCTGTGGGTAATTGCGCGGAGATTCGTGCGGAGATCGATGCGGGGTCTACGGCTCTCAACGAGCTGGTGGCCCGGCAGGAAACAGCTAATCCGGGAGGAAGTGACAGCGATATAGCCTACGGTTTCCTGATGGGCCGAAATGTTGTCGACTGGACGACGGCTGGTCAGTTGCACCTGGAGCAGACCGCCAACCTCTGGTGGAACGGTAATCCACAGTGGCAGAAGGAAGTCGGTGCATACCTAGACCAGACGGGGTTCAATCCGTTCGGAATCGGCGTTCCGGCAATGGGCGGTGCCGCTGGCAAGGTAACGGCCAAGGCGCTCATGAATGCGCTGAAGGCGGGAGAGTTGCCCAAAGGAGAGGTGGCCCCAGGAAAGGCTAATCTGCCTACCATTGGGGCGTTGGCGGATGCTGAGGCGGGAATGCCTTATACCCATCCAGTTAAGCTCGCCGCAAAAGCGACTGGGACAGCAGGGAAGATTAAGATTGAAGCCGGCGCAATACCTGACGCAAATGAAGTACGTGCAGGACAAGGGTTATCTGGTCTTGGGTACGATGTTACGCACCAAACCACTGCGTCAGCTAAAGGTATTCAAGGGCAGCGAACTGCGGACTTGCATGTTGATGGACTCGGTTCCATTGATGTGTATACGCCGAAGAATCTTGATCCGACAAAGATAGTTCGAGCGATAGAGAAGAAGTCGAATCAAGCCGGCGGAGTCTTGGTGCAGGCGGACTTGCCAAGCACTGACATGTCGTCCATTGCTGCTCGTATGTGGGGGAAGACTAACGCGCAGAGTATAAAAACTATATTTTTCCAGAAACCAGACGGATCATTGGTCCGATTTGATCGACCTGCTGGAGGAGGCTGA MDIRSPLNQCIALSLAGILFLNPIVAAAAGLALDKAAGGNTGLGQAGNGVPIVNIATPNDAGLSNNHFRDYNVGANGLILNNATGKTQGTQLGGIILGNPNLKGQAAQVILNQVTGGNRSTLAGYTEVAGQSARVIVANPHGITCQGCGFINTPRATLTTGKPIMDGQRLERFQVDGGDIVVEGAELNVGNLEQFDLITRSAKLNAKLYAKNLNIVTGRNDVQADSLQATPRAADGSEKPQLAIDSSALGGMYAGAIRLVGTEQGVGVRLAGDMAASGGDIRIDASGKLSLAQASSQGDLKIAAQAVELNGKTYAGGSAEIRSAEELVNRQSLAARERIVLEAAHIDNAGVIEAGVEPDERRNARGDLELRSGTLRNAGSLVASRALEAKASQALDNQGGSLKGATVRVDAGHLDNRGGKLLAEGELRVEASSLDNRQDGLLQSRDRAVVKTRGDLDNRGGQVIGLNDLEVGAATLDNGQQGLLGSQQSTRVSAQALVNRGDGEVSGKRVEARVGSLDNRGGKLIGDDLLVVASGAIDNRLGLFSAANRLDLRARSLDNSGKGTLSSRGGLEVSLGGLLDNRDEGNLLSQGAQRVTVGQLDNRAGGLLSSRSELNVHGASLDNRGGVLVADAGLSATGGAFDNRDGGSASGKAGVRVEVASLRNDQGGKLLSDGRLDLAANAVGNAGGRIAAKGDLQATLGSLAQQGGELVSEKTLKVAADTLDNSQSGLIAANGGIAIEARQVDNRAGEISSTSKVAVNAREQLDNRGGKVIGDSGLRLTVQRLLNQAKGVLAGRDGLSLDGGELFNGDGGRLDSQNSLSVSLGGVLDNQGGALVSEGSLTARAARLDNRGGTFSSAGALALTSQAALDNQGGRLLSDAGVTLQGASLDNSRSGVISAKGAVDIRTGVLDNSRNGGIGSNAGITLVAARLDNGQQGRVSAKGLLDANLKGLDQRGGGVLISETGVTLDLNGGTLVNRDGGLIATPGALLLRQLGAVDNGAGGEISSDRAFTLAAASLDNRGGRLIGAANLTLRIAQALDNSLAGVISGAAGLDIAAARLDNSAKGTLASRAGIDLRVDGALDNHAEGTVSGARLTLASASLDNSGKGLLSGNAGLSVATGALDNAEGGQLISQGVLDVSSADLDNRGGALSGKQSLRLSAANLDNRGGLLTSDGELELTAGRVDSADGGEISARGDLRLTVERLVQRQGRLVGERGVSLDLRGGDLDNQGGLISARGPLSIERLSVLDNRQGGEISSQQGFELLARRIDNGQQGRIISAGKLRLDADALGNAGAGLLSGWQGLTVTGGSLDNSAGGTLSSKDGELAISLGGALDNHGQGALVSKGAQRIDAASLDNAQGIVSGESDVTLSIAGKLDNGQGGLVSAQRALSFERDDTLLNNAGGRINGGSLLLKGASLDNSDGQLISQGRLDAILGGALVNTGAARLASGGDLLLRSASVDNRGGKLVSQGLLEISAGSLDNSASGTLASQAGMSLRLGGGALRNQQDGLIFSQAGALDVQAGSLDNRQGTLQAQGDNRLRIGGALDNQGGRLDSRAGNLDLQSGSLDNGAGGVLNSAKGWLKLVTGLFDNSAGVTQAQSLEIRAGQGVRNQQGHLSALGGDNRIVTADFDNQGGGLYASGLLSLDGQRFLNQGAAAGQGGKVGAGRIDFSLAGALANRFGQLESESELHLRAAAIDNSGGSLRALGRSGSTRLVAGGLNNAYGVLESANQDLDLQLGSLANAGGRILHTGNGTFGLDSGQVIRAGGELTTNGLLDIRASEWTNSSVLQAGRLNLDIGTFRQTAEGKLLAVQSFTGRGGDWSNDGLLASDGSFRLDLSGGYRGNGRATSLGDFALNAASLDLGNAASLAGGANVTLGAGNLLVNRGRITAAGDLVASAASLNNYGTLGGGGNLRLNAPALLNERGLLFSGADMTLRAGDITNLYGDVYSLGRLDIARDDAGNRAASLRNLSGVIESGKDFSLRASLIENRRAVLESKSGLYTAKMEQTACIEGVNAGDCSGKRNAIWTITQRDKTEVTASSAMGQLLAGGDFAIDGGTLNNLSSLIGSGGNLTANLEVLDNQGLETGELETIRVLRTARGGDIGGIDQKSRNFTNLYWYQSANFDPARAGEIPAALNAILSDWSFEYEFPSKGPTPISSGDQSYAAVIQAAGDVTVNASTRIDNGVTRPGYTFVGSGRQVGDSAVGGSGVSVVVPLTSQLPPDLARRQVNPVTLPGFSLPQGDNGLFRLSSRFAEDGNGSAALGAGADRTQGGSGVSVGQQGAGNAAGTWQGQGVRVDGLAGAANVQGQGGSTLGGSLPGVARVQGVPGNATPSASHKYLIETNPALTELKQFLNSDYLLSGLGMNPDDSKKRLGDGLYEQRLIRDAVVARTGQRYIDGLSSDEALFRYLMDNAIAYKDQLHLQLGVGLSAEQMAALTHDIVWLEEVEVNGEKVLAPVVYLAQAEGRLAPNGALIQGRDVKLVSGGDLHNVGTLRARNDLSATADNLDNSGLIEAGKRLDLLAGDSIRNRQGGVIAGRDVSLTALTGDVINERSVTRYDSALDGRTWERSFADSAARVEAANSLNVQAGRDIANLGGVLQSRGDLSLDAGRDVTVAAVEDRQGQTRWSTSRLQSVTQLGAEVSAGRDLNVSAGRDLTAVASTLEARRDIALSAGRDVTLAAAANEEHAYSKTRKVTYQEDKVAQQGTRVDAGGDLAINAGQDLRLIASQASAGDEAYLVAGDKLELLAANDSNYYLYDKKKKGDFGRKETRRDEVTDVKAVGSQISSGGDLTLLSGGDQTYQGAKLESGNDLAIVSGGAVTFEAVKDLHQESHEKSKGDLAWNSAKGKGQTDETLRQTQIVAQGNLAIKAVEGLKIDLKHIDQKTVSQTIDAMVQADPQLAWLKEAEQRGDVDWRMVQEVHDSWKYSNSGMGPATQIAVAIAAAAIGGMAAAGALSGAGVGASSFAMGAGVGAAGSLSGTAAVSLINNKGDLGKVLKDSFSSDSLKQIAIASLTGGLTAEYFDGILQTKTDPLTGKVTVDLSSLSGVGRFAANQAMQNATSTVLSQALGQGGSLNEALKSALYNSFAAAGFNFVGDIGQEYSLKPGDPSMVTMHALMGGLAAQVSGGDFATGAAAAGANEALVAKLDQAFKSLSPENREAMVTMGSQLVGVLAAAVRDPDVTGKALESAAWVAKNSTQYNFLNHQDVADLDNALQKCKSQGNCRQVEEEFKARSDENRRRLNGCVAVGNCAEIRAEIDAGSTALNELVARQETANPGGSDSDIAYGFLMGRNVVDWTTAGQLHLEQTANLWWNGNPQWQKEVGAYLDQTGFNPFGIGVPAMGGAAGKVTAKALMNALKAGELPKGEVAPGKANLPTIGALADAEAGMPYTHPVKLAAKATGTAGKIKIEAGAIPDANEVRAGQGLSGLGYDVTHQTTASAKGIQGQRTADLHVDGLGSIDVYTPKNLDPTKIVRAIEKKSNQAGGVLVQADLPSTDMSSIAARMWGKTNAQSIKTIFFQKPDGSLVRFDRPAGGG Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0042 CDS 56546 56941 + hypothetical protein Class 4 NP_248732.1 15595240 PMID:15687295 PSORT predicted signal peptide or lipoprotein ; Type II (lipoprotein) export signal predicted by LipoP (cleavage after residue 20) Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] ATGCCGGTACTGGCTCTGAGACTCACCGCCCTGGCGGCCCTTGTGATCAGCGTGTCGGGGTGCGTCATGGAGGCCTATGGCAGTCGCGCGCGTAGCGATGCGCAGTCCTGGATCGGCTTGCCGATCCAGGATGTGATCAAGCGCTTCGGCGAGCCGGAACGTGTGACGGGGGATGCCGCCAGGCAGAAGTACGTGTGGAAGGAGTACGAGAACTATAGCCACGACTACGACTACACCTACTACGAGCAGGGCCATGGCAATACGCCCAACAGCTCGGTCCTGAACCAGAAGACCGGCACGGCCAACCAGAGCGGCTATTACACCTGCATCTACGAGTTCTTTGCCGACGCCTCGGGCAGGGTGGTCGATGCGACCGCGCGGGGTGAGTGCCGCTAG MPVLALRLTALAALVISVSGCVMEAYGSRARSDAQSWIGLPIQDVIKRFGEPERVTGDAARQKYVWKEYENYSHDYDYTYYEQGHGNTPNSSVLNQKTGTANQSGYYTCIYEFFADASGRVVDATARGECR Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0043 CDS 57212 58594 - hypothetical protein Class 4 NP_248733.1 15595241 PMID:15687295 58% similar to hypothetical protein [Methanobacterium thermoautotrophicum] 11 predicted transmembrane helices ; 13 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Membrane proteins Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] COG3174|COG3174, Predicted membrane protein [Function unknown]. ; COG3174|COG3174, Predicted membrane protein [Function unknown]. ; COG3174|COG3174, Predicted membrane protein [Function unknown]. ATGGGATATTGGCGGCAGCGACGGGCTCTTGGTGGACGGCGCACCGCCGTGCGGGCACCTCGGGGTCGTCTGCTGCTATGGTGCGCACAGGCACGTCGCCATCCTCTCTCCCGGCGAATGGAATCGAGCATGACGCTTTCCCTGGATCTGTTGTTGAGCCTGTGCACGGCCCTGGCCATCGGCCTCCTGATCGGCGCCGAGCGCGGCTGGCAGGAGCGCGACCACGAAGATGCGCGGCAGATCGCCGGAATCCGCACCTTCAGCCTGGCCGGCCTGCTCGGCGGCTTCGCCACCCTGCTGGCGGGCGAACTGGGCAGCGCGGTCTGGGTAGCCTTGCTGCTGGCCCTCGCGGCGCTGGCCGTGGCCGGCTACGTGAGCGATGTCAGGCGTGGCGGCGACCAGGGCATGACCACCGAGATCGCCCTGCTGATGACCTTCCTCCTCGGCAGCCTCGCCCTCACCGAACAGCGCCTGCTGGCTGCCGCCGGCGGCATCGTGCTGACCCTGCTGCTGAGCCTCAAGGACAAGCTCCACGCCCTGCTGAAGCGCCTGACCGCCGAGGAGCTATCGGGCACCCTCAAGCTGCTGTTCATTTCCGTGGTCCTGCTGCCGGTGCTGCCCAACCAGGGCTATGGTCCCTGGGCGTTCTTCAATCCCTACCTGACCTGGTGGATGGTGGTGCTGATCGCCGCCCTCGGTTTCTCCGCCTACCTGGCCATCCGCCTGATCGGCTCGCGCAAGGGCCTGTTGCTGACCGCGGTGCTCGGCGGCCTGGTGTCCTCCACGGTGATGACCCTGACCCTGGCGCGCCTGCGCGAGCGCATGCCCGACGCCCTGTTGGCGTGCGCCCTGCTGGCGACCTCGGCGCTGATGTTCCCGCGCATCCTCGTCGAGATCGGCGCGATCCACCCGGCCTTGCTGAAGGAACTGGCCCTGCCATTCGCCGCCACCACCCTCGTCTACCTTGGCGGCACGCTGTTCCACGCCCTGCGCGGCGGCCGCGCCAGCCAGGAGGCGCCCGACGAGCCAGGCCTGCGCAACCCCTTCGAACTGCTCCCGGCCCTGCGCTTCGCCGCCCTGCTGAGCGCGATCCTGCTGTTGGTGGAGGTCGGCCGGCGGCTGTTCGGCGATGCCGGCATCTACGCGGTCGCGCTGCTCTCCGGCCTCGCCGACGTCGACGCGATCACCCTGTCCCTGGCCCGCGCGGCGCAGGGCGAACTCGATCCAGGCGTGGCCAGCCGCGGCATCGCCCTTGCCGCCCTGAGCAACAGCCTGGTCAAGGCCGGCCTGGTCGTGCTGGTGGGCGGCAAGCGGCTGGCCCTGCAAACGCTACCCTTCAGCCTGGCGGGGCTGCTGGTAGGAGCGCTGCTGATCCTGCTGTGA MGYWRQRRALGGRRTAVRAPRGRLLLWCAQARRHPLSRRMESSMTLSLDLLLSLCTALAIGLLIGAERGWQERDHEDARQIAGIRTFSLAGLLGGFATLLAGELGSAVWVALLLALAALAVAGYVSDVRRGGDQGMTTEIALLMTFLLGSLALTEQRLLAAAGGIVLTLLLSLKDKLHALLKRLTAEELSGTLKLLFISVVLLPVLPNQGYGPWAFFNPYLTWWMVVLIAALGFSAYLAIRLIGSRKGLLLTAVLGGLVSSTVMTLTLARLRERMPDALLACALLATSALMFPRILVEIGAIHPALLKELALPFAATTLVYLGGTLFHALRGGRASQEAPDEPGLRNPFELLPALRFAALLSAILLLVEVGRRLFGDAGIYAVALLSGLADVDAITLSLARAAQGELDPGVASRGIALAALSNSLVKAGLVVLVGGKRLALQTLPFSLAGLLVGALLILL Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0044 CDS 58786 60159 + exoT exoenzyme T Class 1 NP_248734.1 15595242 PMID:96200112 ; PMID:98037517 ; PMID:8631719 ; PMID:9371466 99% similar to ADP-ribosyltransferase (exoenzyme 53) [Pseudomonas aeruginosa] Type III Secretion [PseudoCAP] 2.4.2.- Secreted Factors (toxins, enzymes, alginate) Extracellular[Class 1] ; Unknown[Class 3] ; Extracellular[Class 3] ; Host Associated[Class 3] PF03545|YopE, Yersinia virulence determinant (YopE)|132|201|5e-24 COG5585|COG5585, NAD+--asparagine ADP-ribosyltransferase [Signal transduction mechanisms]. ; COG5585|COG5585, NAD+--asparagine ADP-ribosyltransferase [Signal transduction mechanisms]. ; COG5585|COG5585, NAD+--asparagine ADP-ribosyltransferase [Signal transduction mechanisms]. ATGCATATTCAATCATCTCAGCAGAACCCGTCTTTCGTGGCTGAGTTGAGCCAGGCCGTGGCCGGGCGCCTGGGACAGGTCGAGGCCCGCCAGGTGGCCACTCCCCGGGAGGCGCAACAACTGGCCCAGCGCCAGGAAGCACCGAAGGGCGAGGGCCTGCTCTCCCGCCTGGGGGCTGCCCTCGCGCGTCCCTTCGTGGCGATCATCGAGTGGCTGGGCAAACTGCTGGGGAGCCGTGCCCACGCCGCCACCCAGGCGCCGCTCTCCCGTCAGGACGCGCCGCCTGCCGCCAGTCTCTCTGCCGCCGAGATCAAGCAGATGATGCTGCAAAAGGCACTGCCCCTGACCTTGGGCGGACTTGGCAAGGCGAGCGAGCTGGCGACTTTGACAGCGGAGAGGCTGGCGAAGGATCACACGCGCCTGGCCAGCGGCGACGGCGCTCTGCGATCGCTGGCCACCGCCCTGGTCGGGATTCGCGATGGCAGCCGGATCGAGGCTTCCCGTACCCAGGCTGCCCGCCTGCTCGAACAGAGCGTTGGGGGGATCGCGCTGCAACAGTGGGGGACCGCGGGCGGTGCCGCCAGCCAGCATGTACTCAGCGCAAGCCCGGAGCAACTGCGCGAAATCGCCGTCCAACTGCATGCGGTAATGGACAAGGTCGCCCTGTTGCGCCACGCGGTAGAGAGCGAGGTAAAGGGCGAGCCTGTCGACAAGGCGCTGGCGGATGGCCTGGTGGAGCACTTCGGGCTGGAGGCGGAGCAGTACCTCGGCGAACACCCGGACGGGCCGTACAGCGATGCCGAGGTGATGGCGCTCGGTCTCTATACCAACGGCGAGTACCAGCACCTGAATCGGTCCCTGCGTCAGGGACGGGAGCTGGATGCGGGCCAGGCGTTGATCGACCGGGGCATGTCTGCCGCGTTCGAAAAGAGCGGACCGGCTGAACAGGTCGTGAAGACCTTCCGCGGCACCCAGGGCAGGGATGCCTTCGAGGCGGTGAAAGAGGGCCAGGTCGGCCACGACGCCGGCTATCTCTCCACCTCCCGGGACCCCGGCGTTGCCAGGAGCTTCGCGGGCCAGGGCACGATAACCACCCTGTTCGGCAGATCCGGGATCGATGTCAGCGAGATATCGATCGAGGGCGATGAGCAGGAGATCCTCTACGACAAGGGGACCGACATGCGCGTGCTTCTCAGTGCCAAGGATGGGCAGGGTGTGACCCGTCGGGTGCTCGAAGAGGCCACGCTGGGGGAACGGAGCGGCCACGGCGAGGGACTGCTCGATGCCCTGGACCTGGCAACCGGGACGGATCGTTCAGGCAAGCCCCAGGAACAGGACCTGCGCCTGAGAATGCGCGGCCTCGACCTGGCCTGA MHIQSSQQNPSFVAELSQAVAGRLGQVEARQVATPREAQQLAQRQEAPKGEGLLSRLGAALARPFVAIIEWLGKLLGSRAHAATQAPLSRQDAPPAASLSAAEIKQMMLQKALPLTLGGLGKASELATLTAERLAKDHTRLASGDGALRSLATALVGIRDGSRIEASRTQAARLLEQSVGGIALQQWGTAGGAASQHVLSASPEQLREIAVQLHAVMDKVALLRHAVESEVKGEPVDKALADGLVEHFGLEAEQYLGEHPDGPYSDAEVMALGLYTNGEYQHLNRSLRQGRELDAGQALIDRGMSAAFEKSGPAEQVVKTFRGTQGRDAFEAVKEGQVGHDAGYLSTSRDPGVARSFAGQGTITTLFGRSGIDVSEISIEGDEQEILYDKGTDMRVLLSAKDGQGVTRRVLEEATLGERSGHGEGLLDALDLATGTDRSGKPQEQDLRLRMRGLDLA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0045 CDS 60656 61342 + hypothetical protein Class 4 NP_248735.1 15595243 PMID:15687295 PSORT predicted lipoprotein ; Type II (lipoprotein) export signal predicted by LipoP (cleavage after residue 23) ; Export across inner membrane confirmed by PhoA fusion screen Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] PF03783|CsgG, Curli production assembly/transport component CsgG|11|227|1e-60 COG1462|CsgG, Uncharacterized protein involved in formation of curli polymers [Cell envelope biogenesis, outer membrane]. ; COG1462|CsgG, Uncharacterized protein involved in formation of curli polymers [Cell envelope biogenesis, outer membrane]. ; COG1462|CsgG, Uncharacterized protein involved in formation of curli polymers [Cell envelope biogenesis, outer membrane]. ATGAGTCACAGCGCCAAGAAAGCACTACTGCCGCTCCTCGCCGTCGCCACCCTGGCCGGCCTGGCGGGCTGCGCCACCGAGACCTCCACCGCGTTGCCGGTACAGCAGGTCGAGAGCGTCAACCGACCATACAGCGGCGTGCGTTCGCCGATTGCGGTAGGCAAGTTCGACAACCGCTCCAGCTACATGCGCGGGATCTTTTCCGATGGCGTCGACCGCCTCGGCGGCCAGGCCAAGACCATTCTCATCACCCACCTGCAGCAGACCAATCGCTTCAACGTGCTGGACCGCGACAACATGAGCGAGATCCAGCAGGAAGCGGCGATCAAGGGCCAGGCCCAGCGCCTGAAGGGTGCCGACTACGTGGTGACCGGCGACGTCACCGAGTTCGGCCGCAAGGAAGTCGGCGACCGCCAGCTGTTTGGCATCCTCGGCCGCGGCAAGTCGCAGATCGCCTACGCCAAGGTGGCGCTGAACATCGTCAACATCTCTACCTCGGAGGTCGTCTATTCGACCCAGGGCGCTGGCGAGTACGCCCTGTCCAACCGCGAGGTGATCGGCTTCGGCGGCACCGCCAGCTACGACTCGACCCTCAACGGCAAGGTTCTCGACCTGGCCATGCGCGAGGCGGTGAACAAGTTGGTCAACGCGGTCGATAGCGGCGCCTGGAAGCCACAGAACCAATAA MSHSAKKALLPLLAVATLAGLAGCATETSTALPVQQVESVNRPYSGVRSPIAVGKFDNRSSYMRGIFSDGVDRLGGQAKTILITHLQQTNRFNVLDRDNMSEIQQEAAIKGQAQRLKGADYVVTGDVTEFGRKEVGDRQLFGILGRGKSQIAYAKVALNIVNISTSEVVYSTQGAGEYALSNREVIGFGGTASYDSTLNGKVLDLAMREAVNKLVNAVDSGAWKPQNQ Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0046 CDS 61373 61726 + hypothetical protein Class 4 NP_248736.1 15595244 PMID:15687295 PSORT predicted lipoprotein ; Type II (lipoprotein) export signal predicted by LipoP (cleavage after residue 19) Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] COG4259|COG4259, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG4259|COG4259, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG4259|COG4259, Uncharacterized protein conserved in bacteria [Function unknown]. ATGAGCAAGACGATCACATGGACGGCGGCGCTGCTGGGGAGCATGGCGCTGGCCGGGTGCAGCGGACCGAAGACGCTGTACCAGTGGGAGGGCTACCAGGCCCAGGTCCACGAATACTTCAAGGGTGAATCCAAGGAGGCCCAGGCGCAGGCGCTGGAAGCCGACCTCGAGAAGATCCGGGCGAAGAACGGCGCGGTGCCGCCGGGCTACCACGCCCAGCTGGGGCTGCTCTATTCCAGCATCGGCAAGGACGACCAGATGGTCCGCGAGTTCGAGACCGAGAAGGCGCTGTTTCCCGAGTCGGCGACCTACATGGACTTCCTCCTGAACAACGCCCGTGGAGGTGCCCGTTGA MSKTITWTAALLGSMALAGCSGPKTLYQWEGYQAQVHEYFKGESKEAQAQALEADLEKIRAKNGAVPPGYHAQLGLLYSSIGKDDQMVREFETEKALFPESATYMDFLLNNARGGAR Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0047 CDS 61879 62388 + hypothetical protein Class 4 NP_248737.1 15595245 Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] PF05643|DUF799, Putative bacterial lipoprotein (DUF799)|1|162|1e-37 COG4380|COG4380, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG4380|COG4380, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG4380|COG4380, Uncharacterized protein conserved in bacteria [Function unknown]. GTGAAGGCGACCTACAGCATGCTCTCGCAGGTCACCTTCCCGCTGGCCGAGGCCGGCTACTACGTGGTGCCGGTGGCGCTGGCCGACGAGACCTTCCGCCAGAACGGCCTGACCAGCGCCGGCGACGTGCACCAGGTGTCCCCGGCCAAGCTGCGCGAGATCTATGGCGCCGACGCGGCGCTGTACGTCACGGTGAGCGACTACGGCACGCGCTACATGGTGATCAGCAGCGCGACCATCGTCACCGCCAGCGCCAAGCTGGTCGACCTGCGATCCGGCACCACCCTGTGGACCGGCTCGGCGACCGCCTCCAGCGAGGAAGGCAACGGCGGCAACAACGGCGGCCTGGTGGGCATGCTGATCACCGCGGCGGTCAAGCAGATCATCAACAGTTCGGTGGAGGACGCCGGTTATCCGATCGCCGGGATGACCAGTGCGCGCCTGCTCTCGGCCGGCCAGCCGGGCGGACTGTTGTACGGCCCCCGCTCGCCGAGGTACGGCAGCGACTGA MKATYSMLSQVTFPLAEAGYYVVPVALADETFRQNGLTSAGDVHQVSPAKLREIYGADAALYVTVSDYGTRYMVISSATIVTASAKLVDLRSGTTLWTGSATASSEEGNGGNNGGLVGMLITAAVKQIINSSVEDAGYPIAGMTSARLLSAGQPGGLLYGPRSPRYGSD Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0048 CDS 62403 62786 - probable transcriptional regulator Class 3 NP_248738.1 15595246 55% similar to a region of TrbA [plasmid RK2, Escherichia coli] PF01381: Helix-turn-helix. This large family of DNA binding helix-turn helix proteins includes Cro and CI Transcriptional regulators Cytoplasmic[Class 3] ; Unknown[Class 3] PF01381|HTH_3, Helix-turn-helix|7|61|2e-07 ATGAGCTTCGCGCAGAATCTCCTACGCCTACGCCAGCAGAACGCCCTGACCCAACGGCAGATGGCCGAGCGACTGGGCATCACCGTGAGCCAGTTGCGGCACTTCGAAACCAAGGGCGGGCACCCGTCGCTGGTGGTGCTGCAAACCATCGCCGGACGTTTCGCGGTGCCCCTCGACTGGCTGGTCTGCGAGCGCAGCGAGCGGCAGGCGCTACCGGAAGACCTGCGCCTGCAGTTCGAGGCCATCGGCCGCCTGCGGCTGGACGAGCGGCGCGCCATCCGGGCGTTGCTCGACGACCTGATCCGCCAGTACATGGCCAAGCGCAACGCAGCGGCCAAGCCCCTCCCGGCGGCTTGCGCCGAGGCCACGGAAACGTCCCCGTAG MSFAQNLLRLRQQNALTQRQMAERLGITVSQLRHFETKGGHPSLVVLQTIAGRFAVPLDWLVCERSERQALPEDLRLQFEAIGRLRLDERRAIRALLDDLIRQYMAKRNAAAKPLPAACAEATETSP Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0049 CDS 63068 64729 - hypothetical protein Class 4 NP_248739.1 15595247 PMID:15687295 type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 28) ; type I export signal computationally predicted by Phobius (cleavage after residue 28) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 28) Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] ATGCGCTACGCCCGTCACGCAAGCCGATACTCCCTCTTCACCCTGGCCGTCTCGGCAGCCCTGCTGCCCGGCGCCGGCTGGGCCGCCAACGGCGACCTCGCCGGCGCCCGCAAGCCGCCCAGCGTCGCCTGCTCCTGGAACCGCGAGGCAGCGTTGTCCTACGAGGAGCGCCGGCTCGACACGCCGCTGCCGTTCAGCGGCGCCAACGTCGTCACCCATGACCAGACGCCGCTGGCCGAGCGCATCGTCAAGGGCGCCGGCTTCGACGGCTTCGAACCGGCCTTCGCCAAGCGCCTGTGCGCCGCCGACGGCCGCACCCCGGTCACCAGCTACGCCAAGGCACTGAAGCTGGTCACCGAAGAGGGCCGCGCGCTGTGGCGCGCCGCCGTCGACCGGGCCCAGGGTCGCCGCGCCATTCCCGCCGGCGCGCTGCCGGCCAGCGATGACCGCATGCTCTACTGGACGCGCCTCTACATGACCCGCACCCTGCGCCAGTGGGCGCCATCCTTCCACCTCGGCAAGGCCCAGGCCCAGGCACTGCAATGGCGCTTCGAACGCGCCTCGCGCGGACAGCTGGACATCGACCTGCCACGCCGCTACGCCGCCGACGGCTCGCGCTACCGGCGGATGATCATCAGCGGCTTCGACGTCTTCACCCTGGGCACTCCCGGGACGGCGAACACCGGCCTGCGCAACGGCAACCCCTCGGGCGCCACCGCCCTTGCGCTGGACGGCCGCGAGTTCAGGCTGGCCGACGGCAGCCTGCTGCGTATCGAGGCCTACCTGTTGCCGGTCAGCTACGACCCGTTCAACCGCGGCATGCAGGAAGACACCCTGGGCCCCTGGTTCCGCCCCGGCCCGCGCCGGGTCGACGCCTCCATCACCATCAGCCAGGGCGGCGCCAACCAGTTCTGGCTGGAGGCCTGGAACGGCCGCTTCCACGGCTCCTCCGCCGGCAACGACGGCATCGTCTACTGCCCCGCCGACAGCGCTTTGCCCAACTACGTGCTTCCCCTGGGCAGCGTGACCAATCCCGGCACCGCGCCGATTTCCCTGCGGGGCTCCGGCTGCAATATCAACCCGCCGCGCCGCTGGCTCGGCTACGACAGCGCCAGCCGCTGGCGGCAGAACCTGCCGGCACAGTTCTCCAAGGCCTCGCTGCCGGTCCGCCAGTTGCTCGCCGCCGATACTTGGCGCGGCATCGAGCGGCCGCCGGGCGCTACCAGCCAGGCCGCGGAAGGCTTCGACGTCACCTGGCACACCAACTACGACTTCTTCCCCGATTGCGCCAACCCGCGCACCGAAAACGTGCCGACCAACGGAGTGATGAACGCCATGCCCGATCCCTCCCTGGTGCTCCCGCCGAACCGACGGATCTGCGCGCGCAACGGCGGTGGCGGCGACTACCTGTCCAACGAGAGCGCCTACCGCAACACGGTGCTGCGCGACGCGTTCCGCCTGGAGATTCCCGCCGGGCACATCCATGTCCCGGTGATGAACAACTACTACACCGGCGTACCGGCGAGCGGCGGCGGCGCGCGCAACGACAACGCCATCAGCGACGCCCGCTACGAGGCCTACCGCAGCGCCATCGTGGCGCAGACCCGGGCGCTGCTGGTGGGCGTCGGCAACGCCCTGGCGCAGGGGGCGCAAGCGGACTAG MRYARHASRYSLFTLAVSAALLPGAGWAANGDLAGARKPPSVACSWNREAALSYEERRLDTPLPFSGANVVTHDQTPLAERIVKGAGFDGFEPAFAKRLCAADGRTPVTSYAKALKLVTEEGRALWRAAVDRAQGRRAIPAGALPASDDRMLYWTRLYMTRTLRQWAPSFHLGKAQAQALQWRFERASRGQLDIDLPRRYAADGSRYRRMIISGFDVFTLGTPGTANTGLRNGNPSGATALALDGREFRLADGSLLRIEAYLLPVSYDPFNRGMQEDTLGPWFRPGPRRVDASITISQGGANQFWLEAWNGRFHGSSAGNDGIVYCPADSALPNYVLPLGSVTNPGTAPISLRGSGCNINPPRRWLGYDSASRWRQNLPAQFSKASLPVRQLLAADTWRGIERPPGATSQAAEGFDVTWHTNYDFFPDCANPRTENVPTNGVMNAMPDPSLVLPPNRRICARNGGGGDYLSNESAYRNTVLRDAFRLEIPAGHIHVPVMNNYYTGVPASGGGARNDNAISDARYEAYRSAIVAQTRALLVGVGNALAQGAQAD Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0050 CDS 65339 65479 + hypothetical protein Class 4 NP_248740.1 15595248 PMID:15687295 type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 21) ; type I export signal computationally predicted by Phobius (cleavage after residue 21) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 21) Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] ATGAAAAGGAAGATGCTGGCGGCTTCGCTGCTGCTGTGGATGTTCTCGCTGACGGCGCAGGCGGACTGCGCGGTGCTCGGGCCGGGGGAAGATCCCTGCGCGGGCCCGGTGCTGGGACCGACCGTCTGCGAGTGCCCGTGA MKRKMLAASLLLWMFSLTAQADCAVLGPGEDPCAGPVLGPTVCECP Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0051 CDS 66303 68135 + phzH potential phenazine-modifying enzyme Class 2 NP_248741.1 15595249 probable glutamine amidotransferase PMID:11591691 80.3% identity to phzH[P. chlororaphis PCL1391] ; 59% similar to putative asparagine synthetase YucB [Bacillus subtilis] 2 Pfam protein motifs: glutamine amidotransferase class II signature(residues 43 to 153), asparagine synthetase signature (residues 199 to 608) ; PS00443: Glutamine amidotransferases class-II active site Phenazine biosynthesis [PseudoCAP] ; Phenazine biosynthesis [PseudoCyc] ; de novo biosynthesis of purine nucleotides [PseudoCyc] ; his+purine+pyrimidine biosynthesis [PseudoCyc] Putative enzymes Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0002047|phenazine biosynthetic process|ISS ; biological_process|GO:0006529|asparagine biosynthetic process|IEA ; molecular_function|GO:0003824|catalytic activity|ISS ; molecular_function|GO:0004066|asparagine synthase (glutamine-hydrolyzing) activity|IEA TIGR01536|asn_synth_AEB|asparagine synthase (glutamine-hydrolyzing)|equivalog|5e-278|6.3.5.4|Amino acid biosynthesis|Aspartate family PF00310|GATase_2, Glutamine amidotransferases class-II|61|164|1e-09 COG0367|AsnB, Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]. ; COG0367|AsnB, Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]. ; COG0367|AsnB, Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]. ATGTGCGGTCTCGCGGGTTGGGTGGATTACACGCGCAAGCTCGACGACGAATTTCCGGCGATCTTCGCCATGACCGATACGCTCGCCTTGCGCGGGCCGGATGCCGAGGGCATCTGGAAGCACCGCAACGCCCTGCTGGGTCACCGGCGGCTGGCGGTCATCGACCTCAGCGGCGGCGTGCAGCCGATGTCCTATCGCTTTCCCACCGGCCAGGAGGTCACCCTCGTCTACACCGGCGAGGTGTACAACCACGATGCCCTGCGCGAGCGGTTGCGCCGGGCCGGACATGAGTTCCGCACCCGCAGCGATACCGAGGTGGTCCTGCACGCCTATCTGCAATGGGGCGAGCGTTGTTGCGAGTACCTGACCGGGATGTTCGCCTTCGCCGTCTTCGATGGCCGCGACGGCCACCTGCTGCTGGTGCGCGACCGCCTGGGCATCAAGCCGCTGTATTACGCGCGGCACCGCGAGGGACTGCTGTTCGGCTCGGAGATCAAGTCCATCCTGGCGCATCCGGAATTCGCCGCCAGGCTCGACGCGGTCGGCCTGGTCGACCTCCTGACGCTGTCCCGGGGCACTTCGCAGACGCCGTTCCGCGAGGTCCAGGAACTGCTGCCCGGCCACCTGCTGTCCTGGCGTCCCAATTCCCAGGCGAAGTTGCGCCGCTACTGGGAGGTGCGCCGCCAGGAGCATGCCGACGACCTGCAGAGCACCGTGCAGCGCACCCGCGAACTGGTCACCCGCGCCCTGGGGGCGCAATTGCACGCCGACGTTCCGGTGTGTTCGCTGCTATCGGGTGGGCTCGATTCGACCGCCCTGACCGGCATCGCCCAGCGCATCGCGAAGGCGGAGCACGGCGGCGACATCAATTCGTTCTCGGTGGACTTCGTCGGCCAGGCCGAGCAGTTCCGCAGCGACGACCTGCGTCCCGACCAGGACCAGCCGTTCGCCCTGCTGGCCGCGCAGTACATCGGCAGCCGTCATCGCACCGTGCTCATCGACAATGCCGAACTGGTCTGCGAACGAGCGCGCGAAGAGGTATTCCGGGCCAAGGACGTACCTTTCACCTTCGGCGACATGGATACCTCGCTGCACCTGATGTTCGGCGAGATCCGCCGGCATTCCACGGTGGCCATCTCCGGTGAAGGCGCCGACGAGCTGTTCGGTGGCTACGGCTGGTTCCGCGATCCGCAGGCGGTGGCTGCGGCGCGCTTCCCCTGGGCCTCCAGGGTGCGCCTGCCGGCCGGCTTCATCGACGCCGGTTTCAACCGCCGCTGCGATCTCCTCCAGTACCAGCAGGCCAGCTACGACGATGGGCTGCGCCAGGTCGAACACCTGGCCGGCGACAGCCCGGAGGAGCGGCGGATGCGCGAGTTCAGCCACCTGCATCTGAAGCGCTGGATGGTGCTGCTGCTCGAACGCAAGGATCGCCTGAGCATGTGCAACGGCCTGGAGGTGCGGGTGCCCTACACCGACCATGAGCTGGTGGAGTACGTCTACAACGTGCCCTGGTCGATCAAGAGCCGGGACGGCGAGGAGAAGTGGCTGCTCAAGCGGGCCTGCGCCGACTATGTCCCGGAAGCCGTGCTCAAGCGCCGCAAGAGCCCTTATCCGACTTCTGCCAACCTCGGCTACGAGCGTTTCCTGCGCGGGAGCGTGCGGCGCCTGCTGGAGGACGCGGTGAACCCGGTGTTCGGCATCGTTTCGCGAGAGTTCCTGGCCGCCGAACTGGAGCATCCGGAGGGGTACTTCAACACCCAGGTGAGCCGCCACAACCTGGAGACCGCACTGGCGCTGGAAGGCTGGCTCAGGTTGTACGGGCTCTCCGCCTGA MCGLAGWVDYTRKLDDEFPAIFAMTDTLALRGPDAEGIWKHRNALLGHRRLAVIDLSGGVQPMSYRFPTGQEVTLVYTGEVYNHDALRERLRRAGHEFRTRSDTEVVLHAYLQWGERCCEYLTGMFAFAVFDGRDGHLLLVRDRLGIKPLYYARHREGLLFGSEIKSILAHPEFAARLDAVGLVDLLTLSRGTSQTPFREVQELLPGHLLSWRPNSQAKLRRYWEVRRQEHADDLQSTVQRTRELVTRALGAQLHADVPVCSLLSGGLDSTALTGIAQRIAKAEHGGDINSFSVDFVGQAEQFRSDDLRPDQDQPFALLAAQYIGSRHRTVLIDNAELVCERAREEVFRAKDVPFTFGDMDTSLHLMFGEIRRHSTVAISGEGADELFGGYGWFRDPQAVAAARFPWASRVRLPAGFIDAGFNRRCDLLQYQQASYDDGLRQVEHLAGDSPEERRMREFSHLHLKRWMVLLLERKDRLSMCNGLEVRVPYTDHELVEYVYNVPWSIKSRDGEEKWLLKRACADYVPEAVLKRRKSPYPTSANLGYERFLRGSVRRLLEDAVNPVFGIVSREFLAAELEHPEGYFNTQVSRHNLETALALEGWLRLYGLSA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0052 CDS 68188 68616 - hypothetical protein Class 4 NP_248742.1 15595250 55% similar to hypothetical protein [Synechocystis sp.] Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Unknown[Class 3] COG1917|COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]. ; COG1917|COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]. ; COG1917|COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]. ATGGACCTTCGCCCCAGCCACGTGCATGTGTTCCCACCCAGCCGCGACCTCCCGGCCGCAACCAGTCCGCACCGCGAAACCCTGCTGCGCAGCGGCTGCGCCTGGAACGGCTCGCTCTACCTCGGCTATCCCCTCGGCCAGCCGCAGCTCACCGTGCAGCGCCTGAGCCTGGCCGCCCACGAACGCCTGGACTGGCAGGTCCATCCGATGCCCAGCGCGCTCTACGTGCTCAAGGGCGAACTGCGCCTGGAGACCCGCGACGGTGCCCAGAGCACCCGGGTGCTGGAAGGCGAGGCGGCGGGTTGCCTGATGAACATCATCCATCGCCTGATAGCCGGGGCCGAACCGGTGGAAGCCCTGCTGTTCCATGCCGGCGTGGAAGGCATGCCGGTGGGGCTCGGCGAACGCGGCGAAATGCCCGACGCCTGA MDLRPSHVHVFPPSRDLPAATSPHRETLLRSGCAWNGSLYLGYPLGQPQLTVQRLSLAAHERLDWQVHPMPSALYVLKGELRLETRDGAQSTRVLEGEAAGCLMNIIHRLIAGAEPVEALLFHAGVEGMPVGLGERGEMPDA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0053 CDS 69272 69526 + hypothetical protein Class 4 NP_248743.1 15595251 Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] PF05012|DOC, Prophage maintenance system killer protein|2|56|7e-09 COG3654|Doc, Prophage maintenance system killer protein [General function prediction only]. ; COG3654|Doc, Prophage maintenance system killer protein [General function prediction only]. ; COG3654|Doc, Prophage maintenance system killer protein [General function prediction only]. ATGAACCACTGCTTTGCCAATGGCAACAAACGCACGGCGGCGGCGGCCGCTACGGTTTTCCTCCTGCTCAATGGCATAGAGCTGACGGGGCCCGCTCAGGACTTCGTCGACATCATGGTCGCCCTCGTGACTCGTGAAGCGAGCGTTCAGGACCTGGAAGACTGGATGTTCTACTGGCACAGACCATTCGACGCTTACAACCTGCCGGACAGCGACGCTTTCGAGCGAATGGTCGCCCGCTTGGGCATTGGTTAG MNHCFANGNKRTAAAAATVFLLLNGIELTGPAQDFVDIMVALVTREASVQDLEDWMFYWHRPFDAYNLPDSDAFERMVARLGIG Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0054 CDS 69543 70091 - conserved hypothetical protein Class 4 NP_248744.1 15595252 yjiI 74% similar to hypothetical protein YjiI [Escherichia coli] Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Unknown[Class 3] PF01885|PTS_2-RNA, RNA 2'-phosphotransferase, Tpt1 / KptA family|3|179|3e-49 COG1859|KptA, RNA:NAD 2'-phosphotransferase [Translation, ribosomal structure and biogenesis]. ; COG1859|KptA, RNA:NAD 2'-phosphotransferase [Translation, ribosomal structure and biogenesis]. ; COG1859|KptA, RNA:NAD 2'-phosphotransferase [Translation, ribosomal structure and biogenesis]. ATGGATCGGAAAACCCTCGACGACACCAGCAAGTTCCTCAGCTATGTCCTTCGCCACCAGCCCGAGGCCATCGGCCTGACGCTGGACGGCGAAGGCTGGGCCGACATCGACGCCCTGATCGCCGGCGCGGCGCGGGACGGCCGCGCCCTCGACCGCATGCTGCTCGGCGCGGTGGTCGAGAACAACGACAAGAAGCGCTTCGCCCTCTCCGCCGATGGCCAGCGCATCCGCGCCGTGCAAGGCCACTCGCATGCCGCGGTGGCCATCGCCTACGCCCCCGCGGTCCCGCCCGCAGTGCTCTACCACGGCACCGCCAGCCGCTTCCTCGACTCCATCCGCGAGCGCGGCCTGGTTCCCGGCAGCCGCCACCACGTCCATCTCTCCGCCCGCCGCGCCACCGCCCTGGAAGTCGGCCGCCGCTACGGCAGCCCGGTTCTGCTGGAAATCGACGCGCGCGACATGCATCTGGCCGGGCACCTATTCCACCAGGCGGAGAACGGCGTCTGGCTGACCGAGCGGGTACCCGTGCGGTTCATCCGCGAGGCTTGA MDRKTLDDTSKFLSYVLRHQPEAIGLTLDGEGWADIDALIAGAARDGRALDRMLLGAVVENNDKKRFALSADGQRIRAVQGHSHAAVAIAYAPAVPPAVLYHGTASRFLDSIRERGLVPGSRHHVHLSARRATALEVGRRYGSPVLLEIDARDMHLAGHLFHQAENGVWLTERVPVRFIREA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0055 CDS 70130 70636 - hypothetical protein Class 4 NP_248745.1 15595253 PMID:15687295 0 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Hypothetical, unclassified, unknown Unknown[Class 3] ; Cytoplasmic[Class 3] PF09351|DUF1993, Domain of unknown function (DUF1993)|5|166|1e-74 COG3812|COG3812, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3812|COG3812, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3812|COG3812, Uncharacterized protein conserved in bacteria [Function unknown]. ATGTCCCTGTCGATCTACCAGGCTTCGATCCCGACCTTCCTGCGCACCCTCGGCAACCTCTCGGCGATCCTGAAGAAAGCCGCCGCCCACGCCGAAGCGAAGAACATCGATCCGCGCATCTTCATCGACGCCCGGCTGGCGCCGGACATGTTCCCCCTGGCGCGCCAGGTGCAGATCGCCAGCGACGCCGCCAAGGGCGCCGGCGCGCGGCTGGCCGGGCTGGAAGTGCCGAGCTACGCGGATACGGAAACCACCTTCGACGAACTCCAGGCACGCATCGCTCGCACCGTCGAGTTCCTCGAGGGCATCCGCGAGGAACAACTGGACGGCGCCGAAGAGCGCAACGTGACCCTCAAGGTGCGCGGCCAGGAGATCAGCTTCAACGGCCGCGACTTCCTCTTCGGCTTCGCCCTGCCCAACTTCTTCTTCCACGTCACCACCGCCTACGCCATCCTCCGCCACAACGGCGTCGAACTGGGCAAGATGGACTTCCTCGGCGGCGCCTGA MSLSIYQASIPTFLRTLGNLSAILKKAAAHAEAKNIDPRIFIDARLAPDMFPLARQVQIASDAAKGAGARLAGLEVPSYADTETTFDELQARIARTVEFLEGIREEQLDGAEERNVTLKVRGQEISFNGRDFLFGFALPNFFFHVTTAYAILRHNGVELGKMDFLGGA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0056 CDS 70702 71622 - probable transcriptional regulator Class 3 NP_248746.1 15595254 55% similar to regulator GstR [Rhizobium leguminosarum] PS00044: Bacterial regulatory proteins, lysR family signature Transcriptional regulators Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] TIGR03418|chol_sulf_TF|putative choline sulfate-utilization transcription factor|hypoth_equivalog|1.2e-09||No Data|No Data PF03466|LysR_substrate, LysR substrate binding domain|88|292|1e-33 COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription]. ATGGACCGCCTGACCGCCACTCGCGTCTTCGTCGAAGTCATCGACAGCGGCAGCCAGACCGCCGCCGCCGAGCGTCTGGACATGTCCCGGGCGATGGTCTCGCGCTACCTCGCCGAGTTGGAGGAGTGGGTCGGCGCACGCCTGCTGCACCGCAGCACCCGCCGCCTGAGCCTGACCGACGCCGGCGCGGAGCTGTTGCCGCAGTGCCGCGAGATGCTCGCCGTGGCCGACGCCATGCAGGCCACCGGCCAGACCCGCCGCGACAGCCCGCGCGGCACTCTGCGCATCACCAGCAGCCTGTCCTTCGCCCAGGCCTGGCTGACCCGTGCCGCCGCCGCCTTCGTCGAGCGCTACCCGGGCACCGCCATCGACCTGCAGGTCAACAGCCAGGTGGTCAACCTGGTGGAGGAGCGCATCGACCTGGCCCTGCGCATCGCCAACCAGCTCGACCCCAACCTGATCGCCCGCCGCCTCGGCGAATGCCGCTCGGTGATCTGCGCCGCGCCGGACTACCTGCGCCGCCACGGCACCCCGCGGCGCCCGGAGGACCTGGCGCTGCACAACTGCCTGACCTACTCCTACTTCGGCCGCAGTCTCTGGCAGTTCGAGCGCGACGGCGAGCCGACCAGCGTGCCGGTGGGTGGCAGTCTCAGCGCCAACGAATCCACCGTGCTGCTGGAGGCCGCCGCCGCCGGTGCCGGGATCAGCCAGCAGCCGCTGTACTCGGCAGCCCCGCTGATCCGTAGCGGACGCCTGGTGGCGCTGCTGCCGGAGTGGTCGCCGCAGGTGCTCGGCATCCACGCGGTGTACGCCTCGCGCCGGCAGATGCCGCCGGCGCTGCGGGCGCTGCTGGACTTCCTGGTCGAACGGATGGCGGCCGATCCGCACTGGGACGAGGCGGGCCCCCTGGCGCTGGCGTGA MDRLTATRVFVEVIDSGSQTAAAERLDMSRAMVSRYLAELEEWVGARLLHRSTRRLSLTDAGAELLPQCREMLAVADAMQATGQTRRDSPRGTLRITSSLSFAQAWLTRAAAAFVERYPGTAIDLQVNSQVVNLVEERIDLALRIANQLDPNLIARRLGECRSVICAAPDYLRRHGTPRRPEDLALHNCLTYSYFGRSLWQFERDGEPTSVPVGGSLSANESTVLLEAAAAGAGISQQPLYSAAPLIRSGRLVALLPEWSPQVLGIHAVYASRRQMPPALRALLDFLVERMAADPHWDEAGPLALA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0057 CDS 71730 72617 + hypothetical protein Class 4 NP_248747.1 15595255 PMID:15687295 type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 24) ; type I export signal computationally predicted by Phobius (cleavage after residue 24) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 24) Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] PF00753|Lactamase_B, Metallo-beta-lactamase superfamily|49|187|3e-13 COG0491|GloB, Zn-dependent hydrolases, including glyoxylases [General function prediction only]. ; COG0491|GloB, Zn-dependent hydrolases, including glyoxylases [General function prediction only]. ; COG0491|GloB, Zn-dependent hydrolases, including glyoxylases [General function prediction only]. ATGTCGCGCCATGGATTGCTTCGTTCCCTGTTCGCCGCCGCCGCCCTGCTGGGGGCCGCCGGCGTCTTCGCCGCCAGCGCCGAACCGCTGCGGCTGGAGGTCTACAACCCCGGCGAGAAGGCGATCTTCGCCGTGTCCTCGGAACTGCTGGTGGGCCAGCGCGAGGCGATGCTGATCGACGCGCAGTTCTCCCGCGCCGACGCCGAGCAACTGGTCAAGCGTATCCAGGCCAGCGGCAAGACCCTCAGCACTATCTACATCAGCCACGGCGACCCGGACTTCTACTTCGGCCTCGACGTGCTGAAGGCCGCCTTCCCCGAGGCGAAGATCCTCGCGACGGCGCAGACCGTCGCACACATCCAGGCGACCAAGGACGCCAAGCTGGCCTACTGGGGGCCGATCCTCAAGGACAACGCGCCGACGTCGCTGGTGGTGCCGGAGCCGCTGAAGGGCGACCAGTTGAAGCTGGAAGGCCATGCCCTGAAGGTGGTCGACCTGAAGGGGCCGAGCCCGGACCGCACGGTGCTGTGGATTCCGTCGCTGAAGACGGTGGTTGGTGGCGTGCTGGTGGAATCCGGTTCGCACGTCTGGACCGCCGATACCCAGACCCAGGCCTCGCGCCAGGCCTGGGTGGCGATGCTCGACCGGATCGAGGCGCTGCAACCGCGGCGCGTGGTGCCCGGCCATTTCACCGGCGAGGAGCCGAAGGGCCTGGACGGCGTGCGCTTCACCCGTGACTACCTGAAGGCCCTGGAAGCCGAACTGCCCAAGGCCAGGGATTCCGCCGCGCTGGTCGAGGCGATGAAGCGCCGCTACCCGAACCTGCCGGGCGAGGAAGGCCTGGAGCTGAGCGCCAAGGTGCTCAAGGGCGAGATGCAGTGGCCCTGA MSRHGLLRSLFAAAALLGAAGVFAASAEPLRLEVYNPGEKAIFAVSSELLVGQREAMLIDAQFSRADAEQLVKRIQASGKTLSTIYISHGDPDFYFGLDVLKAAFPEAKILATAQTVAHIQATKDAKLAYWGPILKDNAPTSLVVPEPLKGDQLKLEGHALKVVDLKGPSPDRTVLWIPSLKTVVGGVLVESGSHVWTADTQTQASRQAWVAMLDRIEALQPRRVVPGHFTGEEPKGLDGVRFTRDYLKALEAELPKARDSAALVEAMKRRYPNLPGEEGLELSAKVLKGEMQWP Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0058 CDS 72680 73384 + hypothetical protein Class 4 NP_248748.1 15595256 Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Unknown[Class 3] PF01323|DSBA, DSBA-like thioredoxin domain|10|180|1e-05 COG3531|COG3531, Predicted protein-disulfide isomerase [Posttranslational modification, protein turnover, chaperones]. ; COG3531|COG3531, Predicted protein-disulfide isomerase [Posttranslational modification, protein turnover, chaperones]. ; COG3531|COG3531, Predicted protein-disulfide isomerase [Posttranslational modification, protein turnover, chaperones]. ATGAACGACCTCACCCTGCATTACCTCTACGATCCGCTCTGCGGCTGGTGCTACGGCGCCTCGCCGCTGCTCGCCGCCGCCTGCGAGGTGACGGGTCTGGACGTACGCCTGCATGGCGGCGGCATGATGACCGATGCCAACCGCCAGCCGGTCGGCGCCGGTCTGCGCCACTACGTGATGCCCCATGACCTGCGGATCGCCCAACTGACCGGCCAGCCGTTCGGCAAGGACTACTTCGACGGCCTGCTGCGCGACACCAGCGCGGTATTCGACTCGGCCCCGCCGACCGCCGCCGTGCTTGCCGCCGAAGCGCTCGACGGCCTCGGCGCGGCGATGCTGGCGCGGATCCAGCGTGCCCACTACGTCGAGGGCCGGCGTATCGCCGAGCGTCCGGTGCTGCTCGAGCTGGGTGCCGAACTGGGGCTTGGCGAGGGCTTCGCCGAGGCGTTCGACGCCTGCTCCGGCGAGCCGCTGCGCGCGCACTTCGCCGACAGTCGGCGGCTGATGAACCGTCTCGGCGCCGCTGGCTTCCCGACCTTCGCCCTGGAGCGCGACGGCCGCCTGCAGGTGCTCGACACCGGGCGCTACCTCGGCCAGCCGGACGACTGGCGGGCTTTCCTCGAAACGCAGCTGCGCCTTGCCGGCGGCAGCGGTGCCGTGGGCGGGGCCGCGGCGCCGCTCTGCCGCATCGACGGTTGCGCCTGA MNDLTLHYLYDPLCGWCYGASPLLAAACEVTGLDVRLHGGGMMTDANRQPVGAGLRHYVMPHDLRIAQLTGQPFGKDYFDGLLRDTSAVFDSAPPTAAVLAAEALDGLGAAMLARIQRAHYVEGRRIAERPVLLELGAELGLGEGFAEAFDACSGEPLRAHFADSRRLMNRLGAAGFPTFALERDGRLQVLDTGRYLGQPDDWRAFLETQLRLAGGSGAVGGAAAPLCRIDGCA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0059 CDS 73468 73923 + osmC osmotically inducible protein OsmC Class 2 NP_248749.1 15595257 PMID:91350191 ; PMID:96417852 ; PMID:98326816 ; PMID:1715407 ; PMID:8820643 ; PMID:9663683 69% similar to osmotically inducible protein OsmC [Escherichia coli] Adaptation, Protection Unknown[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0006979|response to oxidative stress|RCA ; biological_process|GO:0006979|response to oxidative stress|IEA ; biological_process|GO:0050896|response to stimulus|ISS ; molecular_function|GO:0004601|peroxidase activity|IEA TIGR03562|osmo_induc_OsmC|peroxiredoxin, OsmC subfamily|subfamily|8.2e-106||No Data|No Data PF02566|OsmC, OsmC-like protein|41|148|2e-18 COG1764|OsmC, Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones]. ; COG1764|OsmC, Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones]. ; COG1764|OsmC, Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones]. ATGTCCATCCACAGCTCCGGAGGAGTCGACATGAAGAAGACGGCATCGGCGGTCTGGCAAGGCGGCCTGAAAGACGGCAAGGGCACCCTTTCCACTGAAAGCGGCGCGCTCAAGGACAACCCCTATGGCTTCAATACCCGCTTCGAGGGCGCACCGGGAACCAACCCGGAAGAGCTGATCGGCGCGGCCCACGCCGGCTGCTTCAGCATGGCCCTGTCGATGATGCTCGGCGAGGCCGGCCTGACCGCCGAACGTATCGAGACCCGCGCCGAGGTCACCCTCGACAAGCAGTCCGACGGTTTCGCCATCACTGCCGTGCACCTGGTGCTCAGGGCGCGCGTGCCGGGGGCGGACGCGCAGACCTTCGAGCAGATCGCCAACAAGGCCAAGGCCGGTTGCCCGGTATCCAAGGTGCTCAACGCGAAGATCAGCCTGGACGCCAGCCTCGACGGCTGA MSIHSSGGVDMKKTASAVWQGGLKDGKGTLSTESGALKDNPYGFNTRFEGAPGTNPEELIGAAHAGCFSMALSMMLGEAGLTAERIETRAEVTLDKQSDGFAITAVHLVLRARVPGADAQTFEQIANKAKAGCPVSKVLNAKISLDASLDG Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0060 CDS 74034 74267 + conserved hypothetical protein Class 4 NP_248750.1 15595258 PMID:15687295 58% similar to hypothetical protein YnfD [Escherichia coli] type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 19) ; type I export signal computationally predicted by Phobius (cleavage after residue 19) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 19) Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] PF06649|DUF1161, Protein of unknown function (DUF1161)|2|75|5e-30 ATGAAAACCATCGGGCTGGGGATTGCCACCTTGCTGTTCAGCGCCACGGCGCTGGCCGCGCCGAAGCCGTGCGAGGAACTCAAGGCGGAGATCGAGACCAAGATCCAGTCGGCCGGGGTGACCTCCTACACCCTGGAGATCGTGCGCAACGACGAAGTCAGCGACCCGAACATGGTGGTCGGCAGTTGCGAGAACGGCACCAAGAAGATCATCTACCAGAAGAACGACGACTGA MKTIGLGIATLLFSATALAAPKPCEELKAEIETKIQSAGVTSYTLEIVRNDEVSDPNMVVGSCENGTKKIIYQKNDD Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0061 CDS 74279 74716 - hypothetical protein Class 4 NP_248751.1 15595259 PMID:15687295 Type II (lipoprotein) export signal predicted by LipoP (cleavage after residue 17) Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] ATGCGTCCACTCACCCGTCTCGTCCCGCTCGCGCTGCTGCTCCTCGCCGGCTGCGCCGGACCGCTGCCGCAGCCGGACCCGCAGATGGCCTGGGTCGAGCTGCGCAGCGCGCCGGCCAACACCCTGCTGGCCGAGCGCCTGGACGGCGAGCGGTTGAGCGACGGGCGCTACTTCCAGGTCACTCCGGGACGCCATGTGCTGGAGGTGCGCTTCCAGTACGAACTCTATGGCGGTTCCGGCGGCGGGGGGGGCGGCTTCGGCGAGCCGGTGCAGATCAACTGCTACCAGCAGGTGGTCTATGACGGCTTCGAGGCGGGCCGGCGCTATCGCCTGGAGGTGCGCCCGCAATTGCGCAGGGCGCTGGCGCTACTGAGCGACGAGCGTGGCGAGGTGGTCGCCCGTTCGAACTTCCAGACCAGCCGCTGCCCGCCGTACTGA MRPLTRLVPLALLLLAGCAGPLPQPDPQMAWVELRSAPANTLLAERLDGERLSDGRYFQVTPGRHVLEVRFQYELYGGSGGGGGGFGEPVQINCYQQVVYDGFEAGRRYRLEVRPQLRRALALLSDERGEVVARSNFQTSRCPPY Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0062 CDS 74773 75189 - hypothetical protein Class 4 NP_248752.1 15595260 PMID:15687295 Type II (lipoprotein) export signal predicted by LipoP (cleavage after residue 15) Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] ATGCGTACGCTGCTGCTTGCCGGTGGCCTGCTCGTCCTGAGCGGCTGCTCACTGCTGATGCCCACCCCCGACCCGAACCGCGCCTGGGTCGACCTCGATACCCAGCCCGACGCCGATCTCGCCGCCGTGGAAGTCGACGACAAGAGCTGGGACCGCACGCGCTACTTCGAGGTCGATCCCGGCACCCGCGAACTCACGGTGCGCTACCAGTTCACCGTCGACCCGACCAACATCGGCCCCGTGGACAGCCCGCTCTGGCGCGATTGCCAGCTCAACCTCAAGTTCAAGGACTTCAGCGCCGGCCAGCGCTACCGCCTGGAGGCCGGGCACATCGGCTTCCGTCCCTGGGCGAAGCTCTACGACCAGGACAACAGGGAACTGGCGCGCGGCCGCGAGGGGCGCTGCGCGAAGGTCTGA MRTLLLAGGLLVLSGCSLLMPTPDPNRAWVDLDTQPDADLAAVEVDDKSWDRTRYFEVDPGTRELTVRYQFTVDPTNIGPVDSPLWRDCQLNLKFKDFSAGQRYRLEAGHIGFRPWAKLYDQDNRELARGREGRCAKV Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0063 CDS 75281 76408 + hypothetical protein Class 4 NP_248753.1 15595261 Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] PF01433|Peptidase_M1, Peptidase family M1|194|232|4e-05 COG4324|COG4324, Predicted aminopeptidase [General function prediction only]. ; COG4324|COG4324, Predicted aminopeptidase [General function prediction only]. ; COG4324|COG4324, Predicted aminopeptidase [General function prediction only]. GTGCTGGTAGGGCGGCGGGCGGTCCGCGTGCTGTGCTATGTTCCGCCCATGCCACGCCGCCTTCGCCATCCGCTTGCTGACCTTCGACTGCCCCGTTGGGTTCCCTGCCTGGCGCTGTTGGCGCTGAGCGGTTGCTCGACCGTCTCCTACTACGGGCAACTGGCCAGCGGCCAGTTCGCCCTGCTGCGCGCCCGCGAGCCGGCCGCCGCGGTGATCGCCGACCCGCAGCGCGACGCGCGCTTGCGCGAACGCCTGGCGAAGGCGGAAAAGGCCCGGCAATTCGCCAGCGAACGCCTCGGCCTGCCGGACAACCGCAGCTATCGCCTGTACGCCGATATCGGCCGGCCCTACGTGGTATGGAACGTGTTCGCCACCCCGGAGCTGTCGCTGCAGCCGGTCACCCATTGCTTCCCCATCGCCGGCTGCGTGGCCTACCGCGGCTACTACAGCGAGGCCGCCGCGCGCGCCGAGGCGGCGCGCCAGCGGGCGCTCGGCGACGACGTCTACGTCGGCGGGGTGCAGGCCTACTCGACCCTCGGCTGGTTCGACGATCCGATCCTCAGCAGCATGCTGCGCTGGGACGACGAACGGCTGGCGACCTTGATCTTCCACGAACTGGCGCACCAGAAGTTCTACCTGCGCGACGACACCGCCTTCAACGAATCCTTCGCCACCTTCGTCGAACAGGAAGGTACCCGCCAGTGGCGCGAGTATCGTGGACTGCCGCCGGCGGACGGCCGCGAGGAGAAGCGCCGCGAGCAGTTCACCGCGCTGGTCCTGGCCAGTCGTGCGCGCCTCGAAGCACTTTATGCCGGGCCGTTGGACGATGCCGCCAAGCGTGCCGGCAAGGCTGCCGAATTCCAGCGCCTGCGCCGCGAGTACGCGGCGCTGAGCCAGCGCGAATGGGGTGGCGAGTCGCCGTTCAAGGCCTGGATCGACGCGCCGTTCAACAATGCCAAGCTGCTTCCCTTCGGCCTCTACGACCAATGGGTGGCGGCGTTCGCCGTGCTGTTCCGCCAGGTCGGCGGCAACTGGCCGGCGTTCTATGCGCGGGTCCGTGCCCTTGGCCAGCTCCCCCTGGCGGAGCGCCAGGCGGCGTTGCAGCGGCTGGCCGCCGCAGCGCCCTGA MLVGRRAVRVLCYVPPMPRRLRHPLADLRLPRWVPCLALLALSGCSTVSYYGQLASGQFALLRAREPAAAVIADPQRDARLRERLAKAEKARQFASERLGLPDNRSYRLYADIGRPYVVWNVFATPELSLQPVTHCFPIAGCVAYRGYYSEAAARAEAARQRALGDDVYVGGVQAYSTLGWFDDPILSSMLRWDDERLATLIFHELAHQKFYLRDDTAFNESFATFVEQEGTRQWREYRGLPPADGREEKRREQFTALVLASRARLEALYAGPLDDAAKRAGKAAEFQRLRREYAALSQREWGGESPFKAWIDAPFNNAKLLPFGLYDQWVAAFAVLFRQVGGNWPAFYARVRALGQLPLAERQAALQRLAAAAP Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0064 CDS 76416 77399 - hypothetical protein Class 4 NP_248754.1 15595262 PMID:15687295 8 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Hypothetical, unclassified, unknown Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] ATGACCGACAACCCCTTCGCCACCCCCACCGCCCCGGTGCAGCCGCCGGCCAGAGAGGTGCCCGCCACCACCCAGCCCTATGCGTTCATCGCGGTGCTGGCGCTGGTCACCTGCCTGTCCTTCGCCGTAAGCCTGGGCATCCAGTGGTACAACGACATTGGCGAGATCCGCCAGCGTTTCTCCGAGCACCTGCAACTGATGGCGCCGCACTGGTTCACCGGCCTGGTGTTCTACGCGGCGGCCAACCTGCTGGTGCTGCATGCCTACCGCGAGAAGCGGCAGCTCGTCGAGTTCCGCCCGCTGGCGCTGCTGCTGATCGGCTACGGTCTGCTCAACCTGGTCTGCGGCATGCTCGCCGGGATCGGCCTGGCACCGCTGACGCTGCCGTTCTACCAGTGGGTGACGGCGCAATCCAGCTACGGCGTCTGGCTGATGGCGTTCAACGAAGCGATGAGCTGGGTCTACCTGCTCCTGGGCAGCCTGCTGCCGTTGGGGCTGGTGCTGCTCGGCAGCCGGGTGAACTCGCCGCGCCTGGCCGAAGGGGAAGAAGCCCGCGTCGCTGCCTGGCAGGTCGCCCTGGGCGCCGCGCTGTGTTTCGCCACGCTGTGTTTCAAGCTGATGCAGTTCCTTCCCTACGCCCTGCTGCGCTACGACGAGCCTTGGCTATACGGCCTGTACCTGAGCGGCGTGGCGTTGCCCGCGGCGCTGCTCTTCGGCGCCGTCTGCACGCGCCTGCCGGCGCGCCTGCAACGCTTCGCCGCCGGCCGCGCGCTGCTGCTCGCGGTGGTCGCCATGCTGCTCTGGAGCGTCGCGCTGCTGGCGGTCGGCGGGGGGCTGGCGCTGCTGATGATCCTCGGCCTGGCGCCCGCTGGCATCGGCTATACGCTGCTGGTGGCGCTGCTCGGCGTCGGCCTGTTGGCGCTGCTCTGGCCGATCGGCCGGCTGGCCACGCGCTGGTGCTACGCCGACCAGCTCGCCGCCTGA MTDNPFATPTAPVQPPAREVPATTQPYAFIAVLALVTCLSFAVSLGIQWYNDIGEIRQRFSEHLQLMAPHWFTGLVFYAAANLLVLHAYREKRQLVEFRPLALLLIGYGLLNLVCGMLAGIGLAPLTLPFYQWVTAQSSYGVWLMAFNEAMSWVYLLLGSLLPLGLVLLGSRVNSPRLAEGEEARVAAWQVALGAALCFATLCFKLMQFLPYALLRYDEPWLYGLYLSGVALPAALLFGAVCTRLPARLQRFAAGRALLLAVVAMLLWSVALLAVGGGLALLMILGLAPAGIGYTLLVALLGVGLLALLWPIGRLATRWCYADQLAA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0065 CDS 77432 78097 - hypothetical protein Class 4 NP_248755.1 15595263 39% similar to phosphoglycolate phosphatase [Alcaligenes eutrophus] ; 54% similar to hypothetical protein Rv2233 [Mycobacterium tuberculosis] Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] TIGR01454|AHBA_synth_RP|AHBA synthesis associated protein|hypoth_equivalog|4.1e-12||No Data|No Data PF00702|Hydrolase, haloacid dehalogenase-like hydrolase|11|192|1e-19 COG0546|Gph, Predicted phosphatases [General function prediction only]. ; COG0546|Gph, Predicted phosphatases [General function prediction only]. ; COG0546|Gph, Predicted phosphatases [General function prediction only]. ATGCGTGACGCCGCGCTGCGCTACCCGAACATCCTCTTCGATCTCGACGGCACCCTCACCGACCCACGCGAGGGCATCACCCGCTCGGTGCAGTTCGCCCTCGCCCGCCTGGGCATCGACGAGCCGGACCTGGCGCGCCTGGAACACTTCATCGGCCCCCCGCTGTTGCAGTGCTTCATGCAGACCTACGGCTTCGACGAAGCGCGCGCCTGGGAGGCGGTGAACCACTACCGCGAGCGCTTCAGGGTCACCGGTCTCTACGAGAACCGCGTGTTCGACGGCATTCCCGAGCTGCTCGAAGCCCTGGTCGGACGCGGCCACACGCTCTACGTCGCGACCAGCAAGCCCGGCGTGTTCGCCCGCGAGATCGCCCGCCACTTCGCCTTCGACCGTCACTTCAAGGCGATCTACGGCAGCGAGCTGGACGGCACGCGCACGCACAAGGAGGAACTGATCCGCCATCTGCTCGACAGCGAAGGCCTGGCAGCGGAGCATTGCCTGATGATCGGCGACCGCATGCACGACCTGCTCGGCGCCAGCCGCAACGGTGTCGCCTGCATCGGCGTCGGCTACGGCTTCGGCAGCGAAGACGAACTGCGCGCGCACCAGCCGACCCATTACTGCGCCGACCTCGCCGCCCTGCGGCAGGTATTGGAATCCCACTGA MRDAALRYPNILFDLDGTLTDPREGITRSVQFALARLGIDEPDLARLEHFIGPPLLQCFMQTYGFDEARAWEAVNHYRERFRVTGLYENRVFDGIPELLEALVGRGHTLYVATSKPGVFAREIARHFAFDRHFKAIYGSELDGTRTHKEELIRHLLDSEGLAAEHCLMIGDRMHDLLGASRNGVACIGVGYGFGSEDELRAHQPTHYCADLAALRQVLESH Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0066 CDS 78090 78632 - conserved hypothetical protein Class 4 NP_248756.1 15595264 yrdA 81% similar to putative transferase YrdA [Escherichia coli] Hypothetical, unclassified, unknown Unknown[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0010124|phenylacetate catabolic process|IEA TIGR02287|PaaY|phenylacetic acid degradation protein PaaY|equivalog|3.4e-13||Energy metabolism|Other COG0663|PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction only]. ; COG0663|PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction only]. ; COG0663|PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction only]. GTGACCATTCGTTCCTACCAGGGCAAAACGCCACTGCTCGGCGAGCGGGTCTTCGTCGATCCCTCGGCCGTGCTCGTCGGCGACATCGAGATCGGCGCCGACAGCTCGGTCTGGCCGCTGGTGGTGATCCGCGGCGACATGCACCGCATCCGCATCGGCCAGCGCAGCAGCATCCAGGACGGCAGCGTGCTGCACATCACCCACGCCGGCCCCTTCAACCCGGACGGTTTTCCGCTGAGCATCGGCGACGAAGTGACCGTCGGGCACAAGGTCCTGCTGCACGGTTGCAGCATCGGCAACCGGGTGCTGGTGGGGATGGGCTCGATCGTCATGGACGGCGCGGTGATCGAGGACGAAGTGATCCTCGGCGCCGGCAGCCTGGTGCCGCCGGGCAAGGTGCTGGAGAGCGGCTTCCTCTACGTCGGCAGCCCGGCGAAGAAGGCCCGTCCGCTGAGCGACAAGGAGCGCGGCTTCTTCGCCTACACCGCCGGCAACTACGTGAAGCTCAAGGACCTGCACATCGCCGAGGACTACCATGCGTGA MTIRSYQGKTPLLGERVFVDPSAVLVGDIEIGADSSVWPLVVIRGDMHRIRIGQRSSIQDGSVLHITHAGPFNPDGFPLSIGDEVTVGHKVLLHGCSIGNRVLVGMGSIVMDGAVIEDEVILGAGSLVPPGKVLESGFLYVGSPAKKARPLSDKERGFFAYTAGNYVKLKDLHIAEDYHA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0067 CDS 78710 80755 + prlC oligopeptidase A Class 2 NP_248757.1 15595265 opdA PMID:92394891 ; PMID:99011323 ; PMID:1325967 ; PMID:9792922 73% similar to oligopeptidase A [Escherichia coli] PS00142: Neutral zinc metallopeptidases, zinc-binding region signature Translation, post-translational modification, degradation Cytoplasmic[Class 2] ; Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0044267|cellular protein metabolic process|ISS PF01432|Peptidase_M3, Peptidase family M3|224|676|1e-134 COG0339|Dcp, Zn-dependent oligopeptidases [Amino acid transport and metabolism]. ; COG0339|Dcp, Zn-dependent oligopeptidases [Amino acid transport and metabolism]. ; COG0339|Dcp, Zn-dependent oligopeptidases [Amino acid transport and metabolism]. GTGAGCGCGAATCCCCTTCTGCAGGCCTACGACCTGCCGCCTTTCTCCTCCATTCGCCCGGAACACGTGAAGCCGGCCATCGAGCGGATCCTCGCCGATAACCGCGCCGCCATCGCCCGCCTGCTGGAAACCCAGCGCGAGCAGCCGACCTGGAAGGGCCTGGTGCTGGCGATGGACGAACTCAACGACCGTCTGGGCGCCGCCTGGAGTCCGGTCAGCCACCTCAACGCGGTGTGCAACAGCGCCGAGCTGCGCGAGGCCTACGAGGCCTGCCTGCCGGAGCTGTCGGCCTACTCCACCGAGCTGGGGCAGAACCGCGCCCTGTTCGAGGCCTACGAGGCGCTGGCGAAGAGCCCCGAGGCGGCCGGCTTCGACGTGGCCCAGAAAACCATCCTCGAACACGCCCTGCGCGACTTCCGCCTGTCCGGCATCGACTTGCCGGCGGACAAGCAGAAGCGCTATGCCGAGGTGCAGTCGCGCCTGTCCGAGCTGGGTAGCCGTTTCTCCAACCAGCTGCTCGACGCCACCCAGGCCTGGACCAAGCATGTCACCGACGAAGCCGCGCTGGCCGGCCTGACCGATTCGGCCAAGGCCCAGATGAAGCAGGCCGCCGAGGCCAAGGGCCTGGACGGCTGGCTGATCAGCCTGGAGTTCCCCAGCTACTACGCAGTGATGACCTATGCCGATGACCGCGCCCTGCGCGAAGAGGTATACGCCGCCTACTGCACCCGCGCCTCCGACCAGGGCCCGAACGCCGGGCAGAACGACAACGGTCCGGTGATGGAAGAGATCCTCGACTTGCGCCAGGAGCTGGCCGGCCTGCTCGGCTTCGCCAACTACGCCGAGCTGTCGCTGGCGACCAAGATGGCCGAGTCCAGCGACCAGGTGCTCAGCTTCCTCCGCGACCTGGCGGTGCGCAGCAAGCCGTTCGCCGCCCGCGACCTGGAGCAGCTGCGCGCCTACGCCGCCGAGCAGGGCTGCACCGAATTGCAGAGCTGGGACGCCGGCTACTACGCCGAGAAACTCCGCGAGGCGCGCTACAGCGTGTCCCAGGAGGCGCTGCGTGCCTACTTCCCGGTGGACAAGGTGCTTTCCGGCCTGTTCGCCATCGTCGAGCGCCTCTACGGCATCCAGATCCGCGAACTGCACGATTTCGAACGCTGGCACGCCGACGTACGCCTGTTCGAGATCCTCGAGAACGGCGAGCACGTCGGCCGCTTCTACTTCGACCTCTATGCCCGCGCCAACAAGCGCGGCGGTGCCTGGATGGACGGCGCCCGCGACCGCCGGCGCGACGCCCAGGGCCGGCTGATCGACCCGGTGGCCTACCTAGTGTGCAACTTCACCCCGGCGGTGAACGGCAAGCCGGCGCTGCTGACCCACGACGAGGTCACTACCCTGTTCCACGAGTTCGGCCATGGCCTGCACCACCTGCTGACCCGCGTCGAGCATGCCGCCGCCTCCGGGATCAACGGGGTGGCCTGGGACGCCGTCGAGCTGCCCAGCCAGTTCATGGAGAACTGGTGCTGGGAACCGGAAGGCCTGGCGCTGATCTCCGCCCACTACGAGACCGGCGTGGCGCTGCCGCAGGACCTGCTGGAGAAGATGCTGGCGGCGAAGAACTTCCAGTCCGGGATGATGATGGTCCGCCAGCTGGAGTTCTCCCTCTTCGACTTCGAGCTGCACGCCACCCACGGCGACGGCCGCAGCGTGCTGCAGGTGCTCGAGGGCATCCGCGACGAAGTGGCGGTGATGCGTCCGCCGGCGTACAACCGCTTCGCCAACAGCTTCGCGCACATCTTCGCCGGCGGCTACGCGGCCGGTTACTACAGCTACAAGTGGGCCGAGGTGCTGTCCGCCGATGCCTTCTCGCGTTTCGAGGAAGAAGGCGTGTTCAACCCCGATACCGGGCGTGCCTTCCGCGAGGCGATCCTGGCCCGCGGCGGCTCCCGCGAGCCGATGCTGTTGTTCGTCGATTTCCGCGGTCGCGAGCCGTCCATCGACGCCCTGCTGCGTCACTCCGGGCTGGTCGGGGAGGCCGCATGA MSANPLLQAYDLPPFSSIRPEHVKPAIERILADNRAAIARLLETQREQPTWKGLVLAMDELNDRLGAAWSPVSHLNAVCNSAELREAYEACLPELSAYSTELGQNRALFEAYEALAKSPEAAGFDVAQKTILEHALRDFRLSGIDLPADKQKRYAEVQSRLSELGSRFSNQLLDATQAWTKHVTDEAALAGLTDSAKAQMKQAAEAKGLDGWLISLEFPSYYAVMTYADDRALREEVYAAYCTRASDQGPNAGQNDNGPVMEEILDLRQELAGLLGFANYAELSLATKMAESSDQVLSFLRDLAVRSKPFAARDLEQLRAYAAEQGCTELQSWDAGYYAEKLREARYSVSQEALRAYFPVDKVLSGLFAIVERLYGIQIRELHDFERWHADVRLFEILENGEHVGRFYFDLYARANKRGGAWMDGARDRRRDAQGRLIDPVAYLVCNFTPAVNGKPALLTHDEVTTLFHEFGHGLHHLLTRVEHAAASGINGVAWDAVELPSQFMENWCWEPEGLALISAHYETGVALPQDLLEKMLAAKNFQSGMMMVRQLEFSLFDFELHATHGDGRSVLQVLEGIRDEVAVMRPPAYNRFANSFAHIFAGGYAAGYYSYKWAEVLSADAFSRFEEEGVFNPDTGRAFREAILARGGSREPMLLFVDFRGREPSIDALLRHSGLVGEAA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0068 CDS 80752 81027 + hypothetical protein Class 4 NP_248758.1 15595266 Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] TIGR02443|TIGR02443|conserved hypothetical protein|hypoth_equivalog|2.6e-33||No Data|No Data PF09526|DUF2387, Probable metal-binding protein (DUF2387)|6|66|4e-22 COG3529|COG3529, Predicted nucleic-acid-binding protein containing a Zn-ribbon domain [General function prediction only]. ; COG3529|COG3529, Predicted nucleic-acid-binding protein containing a Zn-ribbon domain [General function prediction only]. ; COG3529|COG3529, Predicted nucleic-acid-binding protein containing a Zn-ribbon domain [General function prediction only]. ATGAGCCCGGCGATCACCAGGAAGCGCTTCATCGCCGGGGCGGTCTGCCCGGCGTGCAGCGAACAGGACAAGATCCAGATGTGGGAAGAGGACGGCGTGCCGCACCGCGAATGCGTGGCCTGCGGCTACGCCGACACGCTCAACGCCCAGGGCCAGTCGATCCCGAAGGAGCTGGGTACGCGGGTCAACCAGAACGCGCCGAAGCCGGCCAACCCGAAGGTGCAGTCGGTGCAGTTCTTCCCCAATCCCAAGCTGAAGAAGAAGCCCGACGCCTGA MSPAITRKRFIAGAVCPACSEQDKIQMWEEDGVPHRECVACGYADTLNAQGQSIPKELGTRVNQNAPKPANPKVQSVQFFPNPKLKKKPDA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0069 CDS 81116 82174 + conserved hypothetical protein Class 4 NP_248759.1 15595267 72% similar to hypothetical protein [Brucella melitensis] Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] PF04055|Radical_SAM, Radical SAM superfamily|67|247|1e-16 COG1533|SplB, DNA repair photolyase [DNA replication, recombination, and repair]. ; COG1533|SplB, DNA repair photolyase [DNA replication, recombination, and repair]. ; COG1533|SplB, DNA repair photolyase [DNA replication, recombination, and repair]. ATGAGCGCTCCCCTGCCCCCGCGCGGTCGCGGTACCGCCAGCAACCCCCTCAACCGCTTCGCCCCGACCCACAGCGAGGCCTTCGACGATGGCTGGGAGCAGGACGTGCCGCCGATCCAGCTCACCGAGGTGCGCGAGGAGATCGCCCGCACGGTGATCTCCCGCAACCAGTCGCCGGACCTCCCTTTCGATCGTTCGATCAATCCCTACCGTGGTTGCGAGCATGGCTGCATCTACTGCTATGCGCGGCCCAGCCATGCCTATTGGGACCTCTCGCCGGGGATCGATTTCGAGACCCGGCTGATCGCCAAGAGCAACGTCGCCAGCGCGCTGGAGCAGGAACTGAGCAAGCCCGGCTATCGCTGCGCGCCGATCAACCTGGGCGCCAATACCGACCCCTACCAGCCGCTGGAGCGCGAACGCCGCCTGACCCGCCAGGTGCTGGAGGTGCTGCTGCGCTTCCGTCACCCGCTGACCATCGTCACCAAGGGCTCGCTGATCCTTCGCGACCTCGACCTGCTGCGCGAACTGGCGGAGCAGAACCTGGTGGCGGTGATGATCAGCCTGACCACCCTCGACGACGAGCTGAAGCGCATTCTCGAACCGCGCGCGGCGGCGCCCTCGGCGCGACTGCGGGCGATCCGCACGCTCAGCGGCAACGGCATCCCGGTGGGCGTGCTCTGCTCGCCGATGATCCCGATGGTCAACGACATGGAGCTGGAGCGCCTGCTCCAGGCGGCGCGGGACGCCGGCGCGCGCAGCGCCGCGTACATGCTCCTGCGCCTGCCGCGCGAAGTCGGCCCGCTGTTCGAGGAATGGCTGGCGGCGCACTACCCGCAACGCGCCGAGCATGTGATGAGCCTGGTCCGCCAATGCCGTGGCGGCGAGGTCTACGACAGCCGCTTCGGCCACCGCTTTCGTGGCCAGGGACCGTTCGCCGACCTGCTGGCGCAGCGTTTCGCGGTGGCGATGAAGCGCCTCGGGCTGGACCGCCGCGAGGGCTTCGGGCTGGATTGCAGCCGGTTCGCCGTGCCGGGGGCGCAGATGGCGTTGTTCTAG MSAPLPPRGRGTASNPLNRFAPTHSEAFDDGWEQDVPPIQLTEVREEIARTVISRNQSPDLPFDRSINPYRGCEHGCIYCYARPSHAYWDLSPGIDFETRLIAKSNVASALEQELSKPGYRCAPINLGANTDPYQPLERERRLTRQVLEVLLRFRHPLTIVTKGSLILRDLDLLRELAEQNLVAVMISLTTLDDELKRILEPRAAAPSARLRAIRTLSGNGIPVGVLCSPMIPMVNDMELERLLQAARDAGARSAAYMLLRLPREVGPLFEEWLAAHYPQRAEHVMSLVRQCRGGEVYDSRFGHRFRGQGPFADLLAQRFAVAMKRLGLDRREGFGLDCSRFAVPGAQMALF Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0070 CDS 82404 83318 - hypothetical protein Class 4 NP_248760.1 15595268 PMID:15687295 3 predicted transmembrane helices ; Type II (lipoprotein) export signal predicted by LipoP (cleavage after residue 29) ; Export across inner membrane confirmed by PhoA fusion screen Membrane proteins Cytoplasmic Membrane[Class 3] ; Unknown[Class 3] PF05433|Rick_17kDa_Anti, Rickettsia 17 kDa surface antigen|68|114|3e-05 ATGAGCCAACCCAGCGAAAACCGTTTGATCACCTCGGCGCGCTACGCGCTCTGCCTGTTGACCGCCAGCGGCGTGCTGCTCAGCGGCTGCGCCAGCAGCGGCGTCGGCTCGGTCGCCCAGACCACCCGCGCGGAATACTACCCGTCCTGCTACGAGCCGGTGTCGCACCTGCGCAGCACCGATAACGCAGTGCGCAATTCGGCCATCACCGGCGCCATTACCGGCGGCCTCCTGGGCGGCCTGGCCGGCGGCCTGGCCAGCGACGAGAACCGCGGCCGCAATGCCGCCCTCGCTGCCGCAGGCGGCGCCCTGGCCGGCGGCGCGGCGGGCTACTACATGGAGAAGCAGAAGCAGATCAGCGATGACCGCGCGCGCATCGGCTCCTACGGTACCGACGTCGACCGCAGCACCGTCGAGATCAACCGTAGCGTGGCCTACGCCAAGTCGGCGCAAAGCTGCTACCAGAGCCAGTTCAAGGCTCTGCTCGACGGTCGCAAGAACAAGTCGATCAACGAAGCCGAAGGGCGCAAGCGCCTGGCCGAGATCGTCAGCGGCCTGCAGGAGACCAACGCCTTGCTGGTCGCCGCCAACGGCCGTGCCGGCGAGAACATCAGCAACTACACCCAGGCCTACGAGAAAGACCTGCAGCAGGTCGGCGTACCGCGCGCCGAGGTGACCAAGGTCGCCGAGGCCGAGAACCGCGCCAGCACTACGAAAGGCGGCAGCAAGCCCAAGACCGGCAGCAATCCCAAGGTGCCGAAGGAAGCGGTCGCCACCGAGCAGACCATCCGCAAGGCCCAGGACGCGCAAAGCGAAGGCAACAAGGTGGCCTCCCAGGGCCAGGGCATGATCCGGGAAGTCTGCAACAGCCCGGACATGGGCGACTGGGCGCCGCCGAGCTGCGCCAAGGCCTGA MSQPSENRLITSARYALCLLTASGVLLSGCASSGVGSVAQTTRAEYYPSCYEPVSHLRSTDNAVRNSAITGAITGGLLGGLAGGLASDENRGRNAALAAAGGALAGGAAGYYMEKQKQISDDRARIGSYGTDVDRSTVEINRSVAYAKSAQSCYQSQFKALLDGRKNKSINEAEGRKRLAEIVSGLQETNALLVAANGRAGENISNYTQAYEKDLQQVGVPRAEVTKVAEAENRASTTKGGSKPKTGSNPKVPKEAVATEQTIRKAQDAQSEGNKVASQGQGMIREVCNSPDMGDWAPPSCAKA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0071 CDS 83380 85092 - hypothetical protein Class 4 NP_248761.1 15595269 PMID:15687295 42% similar to a region of endo-xylanase XylR [Bacillus stearothermophilus] PSORT predicted signal peptide ; type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 23) ; type I export signal computationally predicted by Phobius (cleavage after residue 23) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 23) ; Export across inner membrane confirmed by PhoA fusion screen Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] PF03781|DUF323, Domain of unknown function (DUF323)|127|360|4e-23 COG1262|COG1262, Uncharacterized conserved protein [Function unknown]. ; COG1262|COG1262, Uncharacterized conserved protein [Function unknown]. ; COG1262|COG1262, Uncharacterized conserved protein [Function unknown]. ATGTTTGAGAAAGCCATTCTTCCGCTCGCCCTCGGCGCCTGCCTGGCATTTGCCGCGCCGGCCTGGGCCGAAGGCGACTCGCCGGACAATCCCAAGCCGCTGGCCGACGACGTCGCCCTGCCGCTGCCGTGTGGCGGCGAGATGGTCTTCCGGCATGTCTACGTACTCGCCGAAGGCGCCCTCGACGATCGCGAGGTCAACCTCGGCTACGCCTTCAACGAAGGCGAGGCGGGCTACCAGCAGTCGTTCATCTCCGGCTACCGGCGCGACTACGTGAACGGCCAGTTCAGCCTCGCCGACCTGGCACCGGCCTGGCAGCAGAAGCTCTCCGCCAGCCTGCCGAAGCCTGCCGCCGGCACCCCGCTGAAGCCGATGCTGTACTTCATCGGCAAGTACGAGGTGACCGCCCGCCAGTACGCCGCGGTGATGAGCCAGGCGGCCGCGCTCTCCGGCCAGGGCGAGGCGCCGGCCTGCGACGTGCCGGACGGAATGGCCGCGCGGCTGCCCAAGGTCAACCTCTCGCGCTTCGACGCCGAACGCTTCGGCGCGGTGTACAGCGCCTGGCTGCTGAAGAACCACCCGGAACTGCTGCCGGTCAGCGGCCGCGGCAAGAATCCCGAGGACGGCGGCATCGGCTTCGTCCGCCTGCCCACCGAGGTCGAGTGGGAGTTCGCCGCGCGCGGCGGCCAGGCGGTAAGCCGCCAGGAACTGGAAGGCCGGCTGTTCCCGCGCAAGGTCGAGGGCAGCGACCAGGAAGGCCCGCTGGGCGACTGGGCGGTGTACAACCAGGTCGCCGGCGGCACCGGGCAGGCCGCGCGACTGTTGCCGGTAGGGATGAAGCGGCCGAACCCGCTGGGCCTGTTCGACGTGATCGGCAATGCCGCGGAGATGGTCCAGGAGTCCTTCCAACTGGTCCACGCCGGTCGCCGGCAGGGCACATATGGCGGTTTCGTGGTGAAGGGCGGGAACTATCTCGAAGGCGAGATGACTCTATTCACCGGGATGCGCCGCGAATACCCGCTGTTCGCCGCCGACGGCAGCGAACAGCGCAACGAGACCACCGGTTTCCGTGTCGCCATCGGCGCGCTGTCCGCGCCGCGCTCGCGCTATCCCGAGCTGTTCGCCCAATGGCAGAAGGAAGGCCGACTAGCGGCATTGACCGATGCCATCGATGACGCTCAAGATCCCACCAAGCAATTGGACGGAATCATTGCCGCCACCCGCGACCCGCAGATGCAGGCGCAGTTGGCCCAGATAAACGAGGAACTCAAGCGTAACGTTTCGTTGATCGCCCGGCAGCGCGAAGAGGCCGCCGGAAACCTGATACAGTCGGCGGCACTGGTCGCCGAGACGATCAACAACTACAACATACGCCTGACCAACCTCAAGAAGGACAGGGAGAAAGCCGTGGCAGCCAGGGATCAGGCGACCGCCCAGCTCTATGCCGGCGCCATCGCCAACGGGCGCAGCGCCCTCGATGGCGCATTGGCCATCTACATCGACAACCTCGCCACCGGCACCCGTTACACCGACGCGGTGATCCAGGCGCAGTTCCAGCGCATCCAGGAAGAACTCAATCGCAACCCGGTTCTGGGCAAGAGCCTGGTCAAGCGCGCGACCCTGTTCGTCAAACACGTCGGAGATTATCGCCAGCAGCACCGGGCCGAGCCGGAGGCGGTATTGAAGGAATTGCTCGCGTCCAGCGGGCGTTGA MFEKAILPLALGACLAFAAPAWAEGDSPDNPKPLADDVALPLPCGGEMVFRHVYVLAEGALDDREVNLGYAFNEGEAGYQQSFISGYRRDYVNGQFSLADLAPAWQQKLSASLPKPAAGTPLKPMLYFIGKYEVTARQYAAVMSQAAALSGQGEAPACDVPDGMAARLPKVNLSRFDAERFGAVYSAWLLKNHPELLPVSGRGKNPEDGGIGFVRLPTEVEWEFAARGGQAVSRQELEGRLFPRKVEGSDQEGPLGDWAVYNQVAGGTGQAARLLPVGMKRPNPLGLFDVIGNAAEMVQESFQLVHAGRRQGTYGGFVVKGGNYLEGEMTLFTGMRREYPLFAADGSEQRNETTGFRVAIGALSAPRSRYPELFAQWQKEGRLAALTDAIDDAQDPTKQLDGIIAATRDPQMQAQLAQINEELKRNVSLIARQREEAAGNLIQSAALVAETINNYNIRLTNLKKDREKAVAARDQATAQLYAGAIANGRSALDGALAIYIDNLATGTRYTDAVIQAQFQRIQEELNRNPVLGKSLVKRATLFVKHVGDYRQQHRAEPEAVLKELLASSGR Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0072 CDS 85085 86284 - hypothetical protein Class 4 NP_248762.1 15595270 PMID:15687295 4 predicted transmembrane helices ; 5 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Membrane proteins Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] PF02687|FtsX, Predicted permease|224|391|1e-11 COG4591|LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane]. ; COG4591|LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane]. ; COG4591|LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane]. ATGCGCGCCGGCCTGCTGCTCTCGCTGGCCTGGGCCGACTACCGCGGCGAGGCGCGCCTGTCGCTCTGCGCGATCTTCGCCCTGGCGGCGGTGATCACCCCGCTGCTGGTGCTGTTCGGCCTCAAGTACGGCCTGGTCAGCACCCTCACCGAGCGGCTGGAGCGCGCGCCTTCGGTGCGCGAGATCATTCCGGTCGGCGGCGCCCGCTACCGTGCCGAGGACATCGCCGCCCTGGCCGCACGCGCGGACGTCGCCTTCGCCGTGCCGCGCACCCGGCAGATCGCCGCCACCGCCGACCTCAGCGGCGGCGGCGAGACCGCCCTGAGCGTCGAGATGATTCCCAGCGCCGCCGGCGACCCGCTGCTGGCCGGCCTGCCGCAACCCGACCGGCCGACCCGCGTGGTGCTCAGCCACGGCGCCGCGGAAAAACTCGGCGCCCAGCCTGGCGAGCGCATCGTCGCGCGCATCGGCCGGCGCATGGATGGCCAGGCACAGAGCCAGCGCCTGGAGCTGGAAGTGCTCGCGGTGCTGCCGCAGGAGCGTTTCGCCCGCGACGCGCTGTTCGCCCCGCTGGCCCTGCTGGAAGCCGCCGAGGACTATCGCGACGGTCGCGCGGTGGCCGCCTACGGCTGGCCGGGAAAGGCCGGCGAGACCCCGCGCGCACGCATCTACCCGGGCTTCCGCCTGTACGCCCGAGACCTCGATGCGGTGGAAGGGCTGCGCCGGCACTTCGTCGCGAGTGGCGTGGAAGTCGCCACCCAGGCCGAGGCCATCGCCCAGGTGCGCAGCCTCAGCCGCAACCTCGGCCTGGTGTTCTGGATCGTCGCCGCGCTGGCCATCGGCGGTGCCTTCGCCGCCATCGCCGCCAGCAGCCTGGCCGCCGTCGAACGCAAGCGCCGGGCCCTGGCGGTGCTACGTCTGCTGGGCTTCCCGACCGCCGCGCTGGTCGGCTTCGTCATGCTCCTGGCGCTGTTCAGCGCCGTCTTCGGCCTGTTCCTCGCCGGGCTGCTGTACGCCGCCACGGCCGGCGCGCTGAACCACCTGTTCGACAACCAGAGCGGCGAGTTCGTCTGCCGCCTGCTGCCCAGCCACTACCTGACGGCGCTGCTCGCCACGCTGCTGTGCAGCGTCCTGGCCGCCGCCAGCGGCGGCTGGCGCGCGGCGCGGATCGAAGCCGCAGAGGGATTACGCGATGTTTGA MRAGLLLSLAWADYRGEARLSLCAIFALAAVITPLLVLFGLKYGLVSTLTERLERAPSVREIIPVGGARYRAEDIAALAARADVAFAVPRTRQIAATADLSGGGETALSVEMIPSAAGDPLLAGLPQPDRPTRVVLSHGAAEKLGAQPGERIVARIGRRMDGQAQSQRLELEVLAVLPQERFARDALFAPLALLEAAEDYRDGRAVAAYGWPGKAGETPRARIYPGFRLYARDLDAVEGLRRHFVASGVEVATQAEAIAQVRSLSRNLGLVFWIVAALAIGGAFAAIAASSLAAVERKRRALAVLRLLGFPTAALVGFVMLLALFSAVFGLFLAGLLYAATAGALNHLFDNQSGEFVCRLLPSHYLTALLATLLCSVLAAASGGWRAARIEAAEGLRDV Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0073 CDS 86284 87003 - probable ATP-binding component of ABC transporter Class 3 NP_248763.1 15595271 59% similar to putative ATP-binding component of a transport system YbjZ [Escherichia coli] PS00211: ABC transporters family signature Transport of small molecules Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0006810|transport|IEA ; cellular_component|GO:0043190|ATP-binding cassette (ABC) transporter complex|IEA ; molecular_function|GO:0005524|ATP binding|IEA ; molecular_function|GO:0042626|ATPase activity, coupled to transmembrane movement of substances|IEA TIGR02982|heterocyst_DevA|ABC exporter ATP-binding subunit, DevA family|subfamily|4.4e-21||No Data|No Data PF00005|ABC_tran, ABC transporter|31|212|4e-31 COG1136|SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]. ; COG1136|SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]. ; COG1136|SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]. ATGATCCTGCGCCTGCACGAGGTCGCCCGCAGCCACGGCGCCGGTCGCCAGCGCTACCGCCTGCGGGTGCCGGCGCTGGAATTGCGCGCGGGTCGCCAGCTGGCCATCGTCGGCCCCAGCGGCTGCGGCAAGAGCACCCTGCTCGACCTGCTGGCGCTGGCCCTGGCGCCGGACCCGGGCGGGCGCTTCGAATTCCTCGCCGGGGAACGCCCGCAGGACATCGCCGCGCTCTGGCGCGACGGCCGCCAGGACCGCTTGGCGGCGCTGCGCCGGCAGCACTGCGGCTACGTGCTGCAAAGCGGCGGGTTGCTCGAGTTCCTCGATGTGCGGCGCAACATCGGACTGCCCTGCGCGTTGCTCGGCGCCCCATCCGCCGAGCGCGTACAGGCGCTGGCCGAGCGGCTGGAAATCGGCGACCAGCTGGACAAGAAACCGGCGGCGCTATCGGTCGGCCAGCGCCAGCGGGTCGCCATCGCCCGCGCCCTGGCGCATGCGCCGCGCCTGTTGCTGGCCGACGAGCCGACCGCGGCGCTCGACCCGCTGAACGCCGAACGGGTGATGCGCCTGCTGGTGGAGCAGGCCCGCGAGCGCGGCGCCTGCACCGTGGTCGCCACCCACGACGAACGCCTGGCTCGCGCCGCCGGCCTGGAAGTCCTGGCCATCCGCTGGCAACGCGAGGCCGACGACAGCGTCGGCGCCTGCCTCGAGGAAGTTGGCTGA MILRLHEVARSHGAGRQRYRLRVPALELRAGRQLAIVGPSGCGKSTLLDLLALALAPDPGGRFEFLAGERPQDIAALWRDGRQDRLAALRRQHCGYVLQSGGLLEFLDVRRNIGLPCALLGAPSAERVQALAERLEIGDQLDKKPAALSVGQRQRVAIARALAHAPRLLLADEPTAALDPLNAERVMRLLVEQARERGACTVVATHDERLARAAGLEVLAIRWQREADDSVGACLEEVG Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0074 CDS 87000 90098 - ppkA serine/threonine protein kinase PpkA Class 1 NP_248764.1 15595272 PMID:99069359 ; PMID:99426839 ; PMID:15687295 ; PMID:9852028 ; PMID:10496921 ; PMID:16763151 ; PMID:17558390 Probable phosphatase directly upstream. ; Part of Hcp1 secretion island I (HSI-I) PS00107: Protein kinases ATP-binding region signature ; 0 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Adaptation, Protection ; Translation, post-translational modification, degradation ; Protein secretion/export apparatus Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0044267|cellular protein metabolic process|IDA ; biological_process|GO:0050896|response to stimulus|IDA PF04652|DUF605, Vta1 like|243|354|2e-06 COG0515|SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]. ; COG0515|SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]. ; COG0515|SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]. ATGGACATAGAACTTCCGGGATTCGACATCGAACGCGAGCTGGGCGAAGGCGCCATGGCCACGGTCTACCTGGCCACCCAGCGCTCGCTGCAGCGCAAGGTGGCGCTGAAGGTGATGGCCGCGGCGCTGGCCGCCGACCCGAGCTTCGCCGAACGCTTCCTGCGCGAAGGTCGGACCCTGGCGCGGCTGTCGCACCCGAACACGGTGACCATCCACGACATCGGCAACGTCGGCAGTTGCTACTACATGGCCATGGAATACCTGCCCAACGGCACGCTCAAGGAGCGCATCCAGCAGGGCCTCGATCCCGAGCAGGGCCTGGCCTACGTACGGCAGGTGGCCGCCGCGCTCGGCTACGCGCACTCCCAGGGCCTGGTGCATCGCGACGTGAAGCCGGCCAACATCCTGTTCCGCGCCGACGGCACCGCGGTGCTCTCGGACTTCGGCATCGCCAAGTCGATCGAGGACAATACCCAGTTCACCCAGGTCGGCTTCGCCGTCGGCACCCCCAGCTACATGAGCCCGGAGCAGGCCCGCGGGCAGGAGATCGACGGCCGCGCCGACCTCTACGCGCTGGGCGTGGTGCTCTACGAGATCCTCACCGGCAAGCTGCCCTACAACGGCAAGGACTCGCTCTCCACCGCCCTGGCCCACCTCACCGAGCCGCTGCCGGAACTGCCGATCGAGCAGGGCCGCTACCAGGACATCCTGCGCCAGTTGCTGGCCAAGGACCCGGCCGAGCGCTTCCCCACCGCCGGCGCGTTGATCGCCGCCCTCGACCGCCTGGCGCCGAGCGCCCTGGAAGCCACCCAGATCCGTCCGCTGGCGACGCCGCAGGGCTCGCCGCGAGCGAGCAACCCGCCGCCGGCCGAACCCGCGCCCCTGCCGCCCGCCGACCTCGGCGGCCTGCAACCGGTGTCGATCCAGTTGCCGCCGGTCACGCCCAGCGCCGGCGGCGCCACGCCGCCTCCGCCTCCGCCGTCGCAAGCGGCGAAACCGCCATCGCCCCCGCCGCCTCCGTTGCCGCCGGCGAAGCCACGTGCCGGCGGCAGCCGCACGCCGTTGATCGCCGCCGCCGCGGCCGCCGTGCTCCTGGCGATCGGCGGCGGCGCCTGGTGGCTGCTGGGCTCGGGCGACGCGCCGAGCGCTGCCGATCCAGCGCCGCTGGGACAGACGCCGGCGGACAAGCCGCAGCAGCAGACCCCGGTGGCCGATGCCGAACAGGACGGCGGCGAGCGTCCGCTGCTGATGCCAGGCAAGAAGACGCTGTTCCAGCGCGTCCTGACCAAACCCGGCGCGGCCATCTCCGCCGAGGCTGGCGGCCCGCCCCGGGCCGGCGCGGTGCCGGCCTTCTCGGTGCTCTACGTGTACGCCCGCAAGCAGGTCGGCGGCAGCCCCTGGCTGCGCGTCGGCGCCTCCAGCAACGGCGAGGGCGACGGCTGGCTGCCGGCTAGCGCGGTGAGCGACTGGAAGCAGAGCCTGGTGCTGAAGTTCACCGAACGCTCCGGCCGCGCGCCGGTGATGTTCCTCAACAGCGCCGAGCAGGTCGAGCGCCTGCTCGGCGATACCCGCGCAGCGCGCGACACCCTGACCCAGGCGGTGGATCACAAGGGCGATCCGCAGGTGGTCGCGGTCGAGCCCAACGACCGGGCGATCCCCCAGGACCAGTTCTACCTGCTGCCGATCTTCGACTCGAAGGAAAGCTTCGACGCCGACGGCCAGCCGGCGCAGTTGCTGGAGGTCGCCTCGATCGACCCCGGCGGCAGCGCCGCGGCACCCCAGGCGCCGGGCCAGGCCGGGCAGGGCGGCGCCAGCGGCGCGGCGAGCGACACCTTCCGCACCGGCATCGTCCTGGTGGTGGACACCTCGGTGTCGATGCAGCCCTACATCGACCGCGTGCGCGAGGTGATCGACGGCCTGCAGCGGCAGATCGGCGAGCGCGGCGACCTGGACAAGGTCAGCTTCGGCCTGGTCGGTTTCCGCAACAACACCGACAAGACCCCCGGCCTGGAATACGTCAGCAAGACCCTGGTGCCGCTGCAACCGGGCAACGACGCGCAGCGCTTCGCCGAGTTGAGCAGCCAGGTGCGCGCCACCGACGTCTCCAGCCACTCGTTCAACGAAGACGCCTTCGCCGGGATCATGCAGGCGGTCGACGAAATGGACTGGTCGCCCTACGCCGGGCGCGTGGTGCTGCTGGTCACCGACGCCGGCGCGCTGCGCAAGAACGACCCGCTCGGGCGCACCCAGATGAACGAGGCCGAGGTCCGCCAGGCGGCGCTGCGCAAGGGCGTGAAGATCTATGCCCTGCACCTGCGCACCCCGGCCGGGAAGAACAACCACGGCTACGCCGAGCAGCAGTACCGCAGCCTCACCGCCGACGCCAACCCGAAGATCGCCGACCTCTACATCCCGGTGGCCGGCGGCGAGGTGAACGCCTTCGGCAACACGGTGAAGGAGATCGGCACGGTGTTCGCCGACCTGGTCCACGACGCCGGCAACCGCAAGCCGCAGGCGCCGCGCTTCGACGCCGCGCCAAGCGTGGCGAGCAAGTCGGCGGCCATCGGCTACGCCATGCAGATGGAATTCCTCGGTCGCCGCGACCCGGTGCGCGCGCCGCAGGTCGTCACCGCCTGGACCGCCGACCGTGACCTGACCAACCCGGCGCTGCCGGCGTTCCAGGTCTGCGTGCTGCTGAGCAAGCTGCAACTCAACGAACTGCAACAGTCGCTGAAACTGATCGTCGACGCGGCCAAGCGCACCCAGACCTCGCCCAAGGACTTCTTCCAGGAAATCGCCAGCGCCAGCGCCTACATGAGCCGCGACCCGGCGCAACTGGTGAAGGGCAGCAACCTGGCGCAGAGCGGCGTACTCGGCGAATACCTGGAAGGCCTGCCGTACCGCAGCAAGTCGCTGAACATGACCCAGGACCTCTGGCTGTCGCTGAGCGTCGCCGAACAGCAGGACTTCATCGACGAACTGGAGTCGAAGATCCGCCTCTACGAAACCTTCCACAACGACGTCGCCAACTGGGTCCGGTTCGGCGACGCCGACGCCGGCGACGCGCTGTACCGCGTGCCGCTGTCGACGCTGCCATGA MDIELPGFDIERELGEGAMATVYLATQRSLQRKVALKVMAAALAADPSFAERFLREGRTLARLSHPNTVTIHDIGNVGSCYYMAMEYLPNGTLKERIQQGLDPEQGLAYVRQVAAALGYAHSQGLVHRDVKPANILFRADGTAVLSDFGIAKSIEDNTQFTQVGFAVGTPSYMSPEQARGQEIDGRADLYALGVVLYEILTGKLPYNGKDSLSTALAHLTEPLPELPIEQGRYQDILRQLLAKDPAERFPTAGALIAALDRLAPSALEATQIRPLATPQGSPRASNPPPAEPAPLPPADLGGLQPVSIQLPPVTPSAGGATPPPPPPSQAAKPPSPPPPPLPPAKPRAGGSRTPLIAAAAAAVLLAIGGGAWWLLGSGDAPSAADPAPLGQTPADKPQQQTPVADAEQDGGERPLLMPGKKTLFQRVLTKPGAAISAEAGGPPRAGAVPAFSVLYVYARKQVGGSPWLRVGASSNGEGDGWLPASAVSDWKQSLVLKFTERSGRAPVMFLNSAEQVERLLGDTRAARDTLTQAVDHKGDPQVVAVEPNDRAIPQDQFYLLPIFDSKESFDADGQPAQLLEVASIDPGGSAAAPQAPGQAGQGGASGAASDTFRTGIVLVVDTSVSMQPYIDRVREVIDGLQRQIGERGDLDKVSFGLVGFRNNTDKTPGLEYVSKTLVPLQPGNDAQRFAELSSQVRATDVSSHSFNEDAFAGIMQAVDEMDWSPYAGRVVLLVTDAGALRKNDPLGRTQMNEAEVRQAALRKGVKIYALHLRTPAGKNNHGYAEQQYRSLTADANPKIADLYIPVAGGEVNAFGNTVKEIGTVFADLVHDAGNRKPQAPRFDAAPSVASKSAAIGYAMQMEFLGRRDPVRAPQVVTAWTADRDLTNPALPAFQVCVLLSKLQLNELQQSLKLIVDAAKRTQTSPKDFFQEIASASAYMSRDPAQLVKGSNLAQSGVLGEYLEGLPYRSKSLNMTQDLWLSLSVAEQQDFIDELESKIRLYETFHNDVANWVRFGDADAGDALYRVPLSTLP Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0075 CDS 90106 90834 - pppA PppA Class 1 NP_248765.1 15595273 PMID:17558395 PpkA kinase directly downstream. ; Part of Hcp1 secretion island I (HSI-I) 51% similar to putative phosphoprotein phosphatase ppp [Mycobacterium tuberculosis] PF00481: Protein phosphatase 2C Putative enzymes ; Protein secretion/export apparatus Unknown[Class 3] ; Unknown[Class 3] PF00481|PP2C, Protein phosphatase 2C|24|234|5e-13 COG0631|PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]. ; COG0631|PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]. ; COG0631|PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]. ATGGTGCCCAACTCAGTCAGCTACTACAGGTCGGCCAGCTACAGCCACGTCGGCATGGTCCGCAAGGTCAACGAAGACGCCAGTCTCGACGCCCCCGAGGCGGGACTCTGGGTGGTCGCCGACGGCATGGGCGGCCACGCCGCCGGCGACTTCGTCAGCAGCCTGATCGTCGATACCCTGCGGCGCATCCCGGCGGCCTCCTCGCTACCGGCCTATGTCGGCGCGTTGCGCACCGGCCTCGCCCAGGTCAACGAGCGGGTTCGCCAGGAGGCTGGCCTGCGTGGCGTCAGCGTGATGGGCAGCACCCTGGTACTGCTCGCCGCGCGCGGCAACCAGGCGAGCTGCCTGTGGGCCGGCGACAGCCGCCTGTACCGCCTGCGCGGCGGCGTGCTGGAAGCCATCTCGCGGGACCACAGCTACGTCCAGGAGCTGCTCGACAACGCATTGATCAGCGAGGAAGAGGCGCGCCACCATCCGCGCGCCAACGTGGTCACCCGCGCGGTCGGCGTGCACGAGCAACTGGAACTGTCGGAAGCCGCGCTGCACGTGCTGCCCGGCGACAGCTTCCTGCTCTGCAGCGACGGCCTCAACAAGACCGCCGACGACAGCGAACTGCGCGACGTGCTCAGCCACAGCGATCCCTATGCGGTGGTCCGCAGCCTGGTCCACCTGGGCCTGACCCGCGGCGCCCCGGACAACATCACGGCCCTGGTGGTCAGGGCCTTCTGA MVPNSVSYYRSASYSHVGMVRKVNEDASLDAPEAGLWVVADGMGGHAAGDFVSSLIVDTLRRIPAASSLPAYVGALRTGLAQVNERVRQEAGLRGVSVMGSTLVLLAARGNQASCLWAGDSRLYRLRGGVLEAISRDHSYVQELLDNALISEEEARHHPRANVVTRAVGVHEQLELSEAALHVLPGDSFLLCSDGLNKTADDSELRDVLSHSDPYAVVRSLVHLGLTRGAPDNITALVVRAF Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0076 CDS 90844 91524 - hypothetical protein Class 4 NP_248766.1 15595274 Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] TIGR03373|VI_minor_4|type VI secretion-associated protein, BMA_A0400 family|hypoth_equivalog_domain|3.7e-71||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF09867|DUF2094, Uncharacterized protein conserved in bacteria (DUF2094)|5|142|6e-40 COG3913|SciT, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3913|SciT, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3913|SciT, Uncharacterized protein conserved in bacteria [Function unknown]. TTGAACAGCGTCGGTTTCTACGGCAAGCTGGCCGGCCGCGGCGATTTCGTCAGCCGCGGCCTGCCGAACACCTTCGTCGAACCCTGGGACGCCTGGCTGGCCAGCGGCATGCGCGCCAGCCAGGACGAGCTCGGCGCGGCCTGGCTCGACGCCTACCTGACCAGCCCGCTGTGGCGCTTCGCCATCGCCCCCGGCCTGCTCGGCGGCGAAGCGGTGACCGGAGTGGTGATGCCGAGCATCGACCGGGTCGGTCGCTATTTCCCGCTGACCGTCGCCTGCCTGCTACCGGCGAACGCCGACCTCGGCGGGCTGGTCGGCGGCGACGACGGCTGGTTCGAACAGGTCGAGAGCCTGCTGCTCTCCACCCTCGAACCGGAGGCCGAGGTCGAGGCCTTCGAGCAGGCGGTGGCGCAGCTCCCGGCACCGCCCTGCGGACCGCGCATCGAACAATCGCTGATCAGCGGCAACCTGCTGCGCAGCGAAGCGGTGACCCCGGCGCAGCGCCTCGCCGCGCTGGCCCAGCACGCCTGCGACGGCGCCAGCCACTGGTGGGGACGCGGCTCGGCACGGATCTCCGCCGGCCTGATGCGCTACCAGGGCCTGCCGCCGGCGCCGGCGTTCGGACGATTCCTCACCGGAGAGGGCGAGGTGATCCCGCTCTTTCCCGGCATACCCGGTTAA MNSVGFYGKLAGRGDFVSRGLPNTFVEPWDAWLASGMRASQDELGAAWLDAYLTSPLWRFAIAPGLLGGEAVTGVVMPSIDRVGRYFPLTVACLLPANADLGGLVGGDDGWFEQVESLLLSTLEPEAEVEAFEQAVAQLPAPPCGPRIEQSLISGNLLRSEAVTPAQRLAALAQHACDGASHWWGRGSARISAGLMRYQGLPPAPAFGRFLTGEGEVIPLFPGIPG Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0077 CDS 91521 94826 - icmF1 IcmF1 Class 2 NP_248767.1 15595275 PMID:15687295 ; PMID:16763151 Part of Hcp1 secretion island I (HSI-I) 40% similar to IcmF protein [Legionella pneumophila] 1 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Protein secretion/export apparatus Outer Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0033103|protein secretion by the type VI secretion system|IEA ; molecular_function|GO:0003674|molecular_function|IEA TIGR03348|VI_IcmF|type VI secretion protein IcmF|hypoth_equivalog|0||Cellular processes|Pathogenesis PF06761|IcmF-related, Intracellular multiplication and human macrophage-killing|424|724|1e-85 COG3523|IcmF, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3523|IcmF, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3523|IcmF, Uncharacterized protein conserved in bacteria [Function unknown]. ATGCAGAGTCTCGCCGAGGTCAGCGCGCCGGACGCCGCCAGCGTCGCCACCGCCGAAGAGCTGGCGACCCTCAAGCAACGCATGGACGAGGCCCTGGCCCTGCTCAAGCGGGCCAAGTTGGGCGGCAGCGAGCGGCGCAACCTGTACGAGTTGCCCTGGTACGTGATCATCGGCCCGCCCGGTTCGGGCAAGACCACCGCGCTGATGAATTCCGGCCTCGACTTCCCGCTCGCCGCGCAGATGGGCGCCGGGGCGATCCGCGGGGTCGGCGGCACGCGCAACTGCGACTGGTGGTTCACCGACGAAGCGGTGCTGCTGGACACCGCCGGCCGCTATACCACCCAGGACAGCCACGCCCAGGTGGACAAGGCCGCCTGGCTGGGCTTCCTCGACCTGCTCAAGACCCAGCGCAAGCGCCGCCCCATCGATGGCGCGTTCATCGCCATCAGCCTTTCCGACCTGCTGCTGGGCAGCGACGCCGAGCGCGCCGCCCATGCCCAGGCGATCCGCGCACGCATCCAGGAGCTGTACCAGCAGCTCGGGGTGCGCTTCCCGATCTACGTGATGCTGACCAAGTTCGACCTGGTGCCGGGCTTCATGGAGTTCTTCGACAGCCTGAACCGCGAGGAACGCGCGCAGGTCTGGGGGATGACCTTCGCCCTCGACGACGGCAAGAGCGCGGAAGGCCCGCTGGCGGTGTTCGACAGCGAATTCGCCCTGCTCGAACAGCGTCTCACCGCGCGCCTGGTGGAACGCCTGCAGCAGGAGCGCGACCCGGCGCGGCGCGACCTGGTCTACGGCTTCCCGCAGCAATTCGCCGCCCTGCGCGAATGCCTCGGCGAGTTCCTCAACGGCGTGTTCAAGCCCAACCCCTACGAGGAACGCCCGCTGTTGCGCGGCCTGTACTTCACCAGCGGAACCCAGGAAGGCAGTCCGATCGACCGCCTGATCGGCAGCATGGCGCAGTCGATGAACCTCGACCGCCAGCACCTGGCGCGGCAGACCGGAACCGGGCGCAGCTACTTCATCGAGCGGCTGTTCCGCGAAGTGGCGTTCGGCGAACGCGGCCTGGTCGGCACCAACCCGAAGGTCGAGCGCCGCCGCAAGTGGCTGACCATCGGCGCGCTGAGCGCCACCGCGCTGGTGGTGCTGGCGGTGACGGCGGTATGGATCGCCAGCTACCGCGCCAACCAGAGCTACATCGCCGCGGTCGACCAGCGCGTCGACCCGCTGGCGCGCGGCATCGAGTCGCTGAGCCCGGCCCAGCGCGACGTCCTGGCCGTACTGCCACAGCTCAACGCGGTGCAGAATCTCGCCGGCGACGCGCCGAGCTGGGCCGAAGGCTACGGGCTGTACCAGGGCGACATGCTCGGCGAGGAGTCCGCCAGCGTCTACCGCAAGCTGCTGATCGCGGTGTTCGCCCCGCGCCTGGTGACCCGCATCGAGGAACAGTTGCGCTCCGGCGGCAGCAGCGATTTCCTCTACGAGGGCCTGAAGGCCTACCTGATGCTCGGCAGCCCGGACCATTACGACGCCGACTTCATCAAGGCCTGGATCAGCCTCGACTGGGAACGCAACCTGCCGCGCGACCTCTCGCCGGAACAGCGCCAGGCGCTGCACGCGCACCTCGACGCGTTGCTCGAACGACGGCCGCCGTCGGCGCGCCTGGACCAGGACCTGGTCGAGGACCTGCGCCGCCAGTTGCAGCAACTGCCGGTGGCGCAGCGGGTCTACGACCGGGTCAAGCGGCAGAGGCTGCCCAAGGACGTGCCCGACTTCCGCATCAGCGACGCCGCCGGCCGCGACGCGCCGCTGGTGTTCGCGCGCAAGAGCGGCAAGCCGCTCACCGACCCGCTCAGCGGCTTCTTCACCTACCGCGGCTATCGCGAGGTGTTCCTCACCGCCAGCCTCAGCCAGGCCGGCACCATCGCCGAGGAACAGTGGGTGCTCGGGCGCGACCTGAACGATGCCGGCGACGCCGCCAACCTGGCCCTCGACGTGCGTCGCCTGTATTTCCAGGACTACCTGCGGCAGTGGGACGACCTGCTCGCCGACCTCACCGTGGTGCCGATCACCAATGTCACCCAGGCCGCCGACGTGCTGCGCATTCTCTCCGGGCCGACCTCGCCGTTCCGCAAGCTGCTCGAGGCAGTGGCCCGCGAGACCGACCTGCAGAAGGGCGACCGGCTGGTCGCCGCGCAAGTGAAGAAGGCCGCCGACGGCACCGTGGACAAGCTCAAGCAGCGCCTCGGCTCGCTGGTCGGCCAGGAGGAAGAGGGCGCCCGCGAACAGCCGCGGCAGGTCGACAGCGACCCGATCAGCGCCCACTTCGCCGAACTCAACAGCCTGGTCAGCAAGGGCGAGGGCGGCAACGAGCCGGCGCCGATCGACAGCCTGCTGGAAGACATGAACGCGCTCTACGTGCAGGTCAGCGCCATGGCCGGAGCCAGCGGCGACTCGCTGCTCGGCGACGCCAAGAACCAGGTGGCCGCCGCCGCCTCGCGCGTGGCCCTCAGCGCCGAGCGCCAGCCGCCGGTGGTCCAGGGCCTGGTGAAGAACGTGGTCAACTCCACCACCAGCAGCATGATGGGCAGCGTGCGCAACCAGCTCAACGCGGCCTGGATCAGCGACGTGGTCAGCGTCTACCGGCAATCCCTGGCCGGGCGCTACCCGATCGCCGCCGGCAGTTCGCGCGACGCCACCCTGGAAGACTTCGGCCACTTCTTCGGTGCCGGCGGGGTGATGGACAGCTACTTCCGCCAGTACCTGCAACCCTACGTCGACACCTCCGCCAGCACCTGGCGCTGGCAGCCCGGCGCGGCGCAGAAGCTCGGCATCAACCCCGGCGTGCTGCACACTTTCCAGCGCGCGGCGGCGATCCGCGACGCCTTCTTCCGCTCCGGCGGCATGCAACCGACGGTGCGCTTCGAGCTCAAGCCGGTGACCATGGACGCGGCGATCAGCCAGTTCATCCTCGACCTCGACGGCCAGCAGCTGACCTACGACCACGGCCCCAGCCGCCCGGTGGCGATGCAGTGGCCGAGCGCCAACGGCCTCGGCGTGGTCCGCCTGACGGTGACGCCGCCGCCCAGCAGCGGCCGTTCCGGCCTGACCCTGGAAGGCCCCTGGGCCTGGTTCCGCCTGCTCGACCAGTCGGACCTGGAACGCGGCAACTCGCCGGACCGCTTCACCCTGCGGCTGCGCATCGACGGCTCCAGCATCGCCTGCGAGCTGCGCGCCAGCAGCGCCTTCAACCCCTTCAAGAGCCGGGTCGTGTCCGGCTTCAGCCTCCCGGAGCGCCTTTGA MQSLAEVSAPDAASVATAEELATLKQRMDEALALLKRAKLGGSERRNLYELPWYVIIGPPGSGKTTALMNSGLDFPLAAQMGAGAIRGVGGTRNCDWWFTDEAVLLDTAGRYTTQDSHAQVDKAAWLGFLDLLKTQRKRRPIDGAFIAISLSDLLLGSDAERAAHAQAIRARIQELYQQLGVRFPIYVMLTKFDLVPGFMEFFDSLNREERAQVWGMTFALDDGKSAEGPLAVFDSEFALLEQRLTARLVERLQQERDPARRDLVYGFPQQFAALRECLGEFLNGVFKPNPYEERPLLRGLYFTSGTQEGSPIDRLIGSMAQSMNLDRQHLARQTGTGRSYFIERLFREVAFGERGLVGTNPKVERRRKWLTIGALSATALVVLAVTAVWIASYRANQSYIAAVDQRVDPLARGIESLSPAQRDVLAVLPQLNAVQNLAGDAPSWAEGYGLYQGDMLGEESASVYRKLLIAVFAPRLVTRIEEQLRSGGSSDFLYEGLKAYLMLGSPDHYDADFIKAWISLDWERNLPRDLSPEQRQALHAHLDALLERRPPSARLDQDLVEDLRRQLQQLPVAQRVYDRVKRQRLPKDVPDFRISDAAGRDAPLVFARKSGKPLTDPLSGFFTYRGYREVFLTASLSQAGTIAEEQWVLGRDLNDAGDAANLALDVRRLYFQDYLRQWDDLLADLTVVPITNVTQAADVLRILSGPTSPFRKLLEAVARETDLQKGDRLVAAQVKKAADGTVDKLKQRLGSLVGQEEEGAREQPRQVDSDPISAHFAELNSLVSKGEGGNEPAPIDSLLEDMNALYVQVSAMAGASGDSLLGDAKNQVAAAASRVALSAERQPPVVQGLVKNVVNSTTSSMMGSVRNQLNAAWISDVVSVYRQSLAGRYPIAAGSSRDATLEDFGHFFGAGGVMDSYFRQYLQPYVDTSASTWRWQPGAAQKLGINPGVLHTFQRAAAIRDAFFRSGGMQPTVRFELKPVTMDAAISQFILDLDGQQLTYDHGPSRPVAMQWPSANGLGVVRLTVTPPPSSGRSGLTLEGPWAWFRLLDQSDLERGNSPDRFTLRLRIDGSSIACELRASSAFNPFKSRVVSGFSLPERL Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0078 CDS 95048 96397 - hypothetical protein Class 4 NP_248768.1 15595276 PMID:15687295 53% similar in the C-terminal ~120 amino acids to motility protein B [Bacillus subtilis] PF00691: OmpA family ; 1 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Hypothetical, unclassified, unknown Outer Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0052048|interaction with host via secreted substance|IEA ; molecular_function|GO:0003674|molecular_function|IEA TIGR03349|IV_VI_DotU|type IV / VI secretion system protein, DotU family|subfamily_domain|1.8e-97||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF00691|OmpA, OmpA family|339|437|4e-17 COG3455|COG3455, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3455|COG3455, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3455|COG3455, Uncharacterized protein conserved in bacteria [Function unknown]. ATGCCTCCCATCGACGATCCCTTCGGCACCCCGGCCGGCGGCGGCAACGGAAGCCCGCCCGACGACCGCACCATGATCATGCCGCGTCCCGGCGGCCGCGCCCCGGAACCGGCCGGCGGCCCCCGCGGCGGCGATCCCTACACGCCGCCGCCGATGGCCAGCCTGGCGCCGCTGAGCGGCCGCGGCGACGGCCTCAACCCGCTGGAGCAGGCCGCCGGCCCACTGCTGGCGATGCTCACCCGCCTGCGCAACACCATCGCCCATCCGGCGCCGGCCAGCCTGCGCGCGCAACTGCTCGGCTACCTGCGCCAGTTCGAGGAGAAGGCACGCCAGGCCGGCGTGGCGCCGGACGAAGTGATGCTGGCGCGCTACGTGCTCTGCACCGCCCTCGACGAAGCGGTGCTCAGCACGCCGTGGGGCAGCACCAGCGACTGGGGCAAGCAGAGCCTGCTGATCACCCTGCACAACGAGGCCTGGGGCGGCGAGAAGGTCTTCCAGTTGCTCGAACACTGCCTGCAGAACCCGCACCAGCGCCTGCACCTGCTGGAGCTGCTGTACCTGTGCACCAGCCTCGGCTTCGAAGGCCGCTACCGGGTCATGCACGACGGCCGCAGCCAACTGGAGGCGCTGCGCGAGCGCACCGCGGCGGTGATCCGCAGCACCCGCGGCGAGTACGAGCACGAACTGTCGCCGCACTGGCGCGGCCTCAGCGTGATGCGCGACCGCCTTTCGCAATACCTGCCGCCGTGGGTCGGTATCGCCATCGGCCTGGCCTTGCTGCTGGCCTTGCTGTTCGGCCTGCGGATGAAGCTGGCCGCCGACGCCGAGCCGGTGTTCAAGCGCATCCACGCCATCGGCGAGATCCCGGTGCAGGCCATCGACCGCCCGGCGGTGCAGCCGCGGGTGATCGAGCGGCCACGCCTGGCGCGCTTCCTCGCCGACGACATCAAGGCCCAGCGAGTGGCGGTGGAGGACGCCGTCGACCGCTCGGTGGTGACCATCCGCGGCGACGAGCTGTTCGCCAGCGCCAGCGCCAGCGTGCGCGACGAGTTCCAGCCGCTGCTGCTGCGCATCGCCGACGCCCTGCGCAAGGTCAAGGGCCAGGTGCTGGTCACCGGCCATAGCGACAACCGGCCGATCGCCACGCTGCGCTACCCGTCCAACTGGAAACTGTCCCAGGCCCGCGCCCAGGAGGTCGCCGACCTGCTCGGCGCGACCACCGGCGACGCCGGCCGCTTCACCGCCGAAGGGCGCAGCGACACCGAGCCGGTGGCGACCAATGCCAGCGCCGAAGGCCGCGCACGCAACCGCCGGGTGGAAATCACCGTATTCGCGGAGGGCGCGCAATGA MPPIDDPFGTPAGGGNGSPPDDRTMIMPRPGGRAPEPAGGPRGGDPYTPPPMASLAPLSGRGDGLNPLEQAAGPLLAMLTRLRNTIAHPAPASLRAQLLGYLRQFEEKARQAGVAPDEVMLARYVLCTALDEAVLSTPWGSTSDWGKQSLLITLHNEAWGGEKVFQLLEHCLQNPHQRLHLLELLYLCTSLGFEGRYRVMHDGRSQLEALRERTAAVIRSTRGEYEHELSPHWRGLSVMRDRLSQYLPPWVGIAIGLALLLALLFGLRMKLAADAEPVFKRIHAIGEIPVQAIDRPAVQPRVIERPRLARFLADDIKAQRVAVEDAVDRSVVTIRGDELFASASASVRDEFQPLLLRIADALRKVKGQVLVTGHSDNRPIATLRYPSNWKLSQARAQEVADLLGATTGDAGRFTAEGRSDTEPVATNASAEGRARNRRVEITVFAEGAQ Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0079 CDS 96404 97738 - hypothetical protein Class 4 NP_248769.1 15595277 similar context as the paralog. ; Adjacent to a predicted lipoprotein 75% similar over a small region in the C-terminus to hypothetical protein z29f [Vibrio cholerae] Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0033103|protein secretion by the type VI secretion system|IEA ; molecular_function|GO:0003674|molecular_function|IEA TIGR03353|VI_chp_4|type VI secretion protein, VC_A0114 family|hypoth_equivalog|5e-212||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF05936|DUF876, Bacterial protein of unknown function (DUF876)|19|443|1e-155 COG3522|COG3522, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3522|COG3522, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3522|COG3522, Uncharacterized protein conserved in bacteria [Function unknown]. ATGTCCTGGAATAACCGCGTGGTGTGGTCCGAAGGCATGTTCCTGCGGCCACAGCATTTCCAGCAGCACGACCGCTACCTGGAAACCCTGGTGGATGGCCGCTGCCGCTCGCTCCTGGCGGGCGGCTGGGGCTTTTCCGAGCTGAAGCTGGACGATGCCCTGCTGACCCAGGGCAAGCTGGCCATCGTCAGCGCCCGCGGCGTGCTGCCGGATGGTACGCCGTTCAACATCCCCGCCGACGATCCGGCGCCGGCGCCGCTGAATGTCGAGGAAAGCCTGCGTGATGGCATCGTCTACCTCGGCCTGCCGCTGAAGCGGGTCGGCACCCGCGACACGGTAGAGGAGGGCGAGGCCCTCGGCGGCGCCCGCTACGTCAGCCAGGTGCAGGAAGTGCGCGACGACAATGCCGCCTTCGAGAGCCGCGCGCCAGTGGCCCTGGGCAGCCAGGCGTTCCGCCTGCTGACCGAGCGCGACGGCCTCGGCGAATACGCCGCGGTGGGCGTCGCGCGGGTCCGCGAGAAGCGCGCGGACCAGGCCCTGAGCCTGGACGAGGACTACCTGCCGCCGGTACTCGACATTGCCGCCGCGCCGCCCCTGGCGTCCTTCGCCAAGGAGCTGCTGGGCCTGCTCCACCAGCGCGGCGAAGCCCTCGCCGGGCGGGTGGTGGCCTCCAGCGCCGGGGGCGCCTCGGAAATCGCCGACTTCCTGCTGCTGCAACTGGTCAACCGCGCCGAGGCCCTCACCGGTCACCTGTCCCGCGTGCGCCCGCTGCACCCGCAGGAGCTGTACCGCGAACTGGTGGCCCTGGCCGGCGAGTTCTGCACCTTCACCGCCAGCCAGCGGCGTCCCGAGGAGTACCCGGTGTACAACCACGACGACCTGGCCGCCAGCTTCGCCCCGGTGATGCTCGCCCTGCGCCAGGCGCTGGCGACGGTGATCGACGCCAAGGCGATCGCCATCCCGATCGTCGAGAAGGCCTACGGCGTGCACGTCGCGATGCTCAGCGACCGCAGCCTGATCGACAACGCCAGCTTCGTCCTGGTGGTGCGCGCCGACGTCCCCGGCGAGAGCCTGCGCGGGCACTTCCCGCAGCAGGCCAAGGTCGGCTCGGTGGAGCACATCCGCGACCTGGTCAACCTGCAACTGCCGGGTATCGGCCTGCTGCCGATGCCGGTGGCGCCGCGGCAGATCCCCTACCACGCCGGCTCCACCTATTTCGAACTGGACCGCGGCAGCGCGCATTGGAAGCAGCTGACGCACTCCGGCGGCTTCGCCTTCCACATCGCCGGCCAGTTCCCCGGGCTGAACCTGGCCTTCTGGGCCATTCGAGGATAA MSWNNRVVWSEGMFLRPQHFQQHDRYLETLVDGRCRSLLAGGWGFSELKLDDALLTQGKLAIVSARGVLPDGTPFNIPADDPAPAPLNVEESLRDGIVYLGLPLKRVGTRDTVEEGEALGGARYVSQVQEVRDDNAAFESRAPVALGSQAFRLLTERDGLGEYAAVGVARVREKRADQALSLDEDYLPPVLDIAAAPPLASFAKELLGLLHQRGEALAGRVVASSAGGASEIADFLLLQLVNRAEALTGHLSRVRPLHPQELYRELVALAGEFCTFTASQRRPEEYPVYNHDDLAASFAPVMLALRQALATVIDAKAIAIPIVEKAYGVHVAMLSDRSLIDNASFVLVVRADVPGESLRGHFPQQAKVGSVEHIRDLVNLQLPGIGLLPMPVAPRQIPYHAGSTYFELDRGSAHWKQLTHSGGFAFHIAGQFPGLNLAFWAIRG Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0080 CDS 97754 98218 - hypothetical protein Class 4 NP_248770.1 15595278 PMID:15687295 PSORT predicted lipoprotein ; Type II (lipoprotein) export signal predicted by LipoP (cleavage after residue 15) Hypothetical, unclassified, unknown Unknown[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0033103|protein secretion by the type VI secretion system|IEA ; molecular_function|GO:0003674|molecular_function|IEA TIGR03352|VI_chp_3|type VI secretion lipoprotein, VC_A0113 family|hypoth_equivalog|1.2e-77||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis COG3521|COG3521, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3521|COG3521, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3521|COG3521, Uncharacterized protein conserved in bacteria [Function unknown]. ATGCAGAAACTGATCGTCGCGCTGTTCGGGCTGCTGCTCGCCGCCTGTTCGTCCAGCCCGCCGGAAACCCCGCCGACCCGGGTGGTGATCTGGCTCCACGCCGCACCGAACCTCAACCCGTCCGCCGCCGGCCAGGCGGCGCCGCTGCGCCTGCGGCTGTACGAGCTGAAGAAAGACACCGCGTTCGGCCGCGCCGACTACTTCGCCCTCACCGACAACGCCCAGTCGACCCTCGGTGGCGACCTGGTGGAGCAGGACGAGTTCCTCCTGCGTCCGGGCGAGGAACGGCGCATCGAACGCACGCTCGACGAGCAGACCCGCCAGCTCGGTTTCGTCGCCGCCTACCGCGACCTCGACCGCGCCACCTGGCGCCAGGTCCTCGACGTGCCGGGGCAACGCACCAGCCATCTCGACATCACGCTCGGCGCGCAGGCCATCGGCATCGTCGCGCGTCCCGCGCCCTGA MQKLIVALFGLLLAACSSSPPETPPTRVVIWLHAAPNLNPSAAGQAAPLRLRLYELKKDTAFGRADYFALTDNAQSTLGGDLVEQDEFLLRPGEERRIERTLDEQTRQLGFVAAYRDLDRATWRQVLDVPGQRTSHLDITLGAQAIGIVARPAP Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0081 CDS 98263 99756 - fha1 Fha1 Class 1 NP_248771.1 15595279 PMID:17558395 41% similar to a region of circumsporozoite protein [Plasmodium berghei] Protein secretion/export apparatus Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0033103|protein secretion by the type VI secretion system|IEA ; molecular_function|GO:0003674|molecular_function|IEA TIGR03354|VI_FHA|type VI secretion system FHA domain protein|hypoth_equivalog|4.9e-226||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF00498|FHA, FHA domain|29|97|8e-15 COG3456|COG3456, Uncharacterized conserved protein, contains FHA domain [Signal transduction mechanisms]. ; COG3456|COG3456, Uncharacterized conserved protein, contains FHA domain [Signal transduction mechanisms]. ; COG3456|COG3456, Uncharacterized conserved protein, contains FHA domain [Signal transduction mechanisms]. ATGCCGCTGCGATTGACCATCACCAGCTACCACAAGCTGACCCCCGGTCAGTGTTCGGAAAAGGTACTGGACCAGGGACAGCTGACCATCGGTCGGGGCCCGGACAACGACTGGGTCCTGCCGGACCCGGAGCGCCTGGTCTCCAGCCGCCACTGCACCATCCTCAACCGCGACGGGGTGTACTACCTCACCGACACCAGCACCAACGGCGTGCTGCTGGTCAATGCCGGGCACCGCCTGCGCCGCGGCAACAGCGAGCCGCTGCAGGACGGCGAGACCGTCCGCCTCGGCGAATACGACATCCTCGTCCAGCTCGGCCATGACATCGCCCTGCCCGGCAGCGGCAATCCGCAGACCGATCCGTTCACCAGCTTCGACGCCCTGATGAGCCGGCAGGCCGCCGGATCGGCGCCTGCCTTCGCCGAACCGGCGCCCACCCCGCACCCCGCGGTGACGGCGCATTTCCAGGGCGGCTCGCCGCTGGACACCAAGCCCGACCTGTTCGACTTCCTCACCCCGCCGCCGCCCGGCGCGGCGCCGCGTCCGGACCATGTACCGGCCGAACAGCACGACTTCCGCCCGCCGGAACCGGTGATCCCGCCGCCCCCCGCGACCACCCCGGCGCCACCGCCCGCTGGCGGCGCACCGCTGATTCCGGCCGACTGGGACCCGTTCGCCGAACTGCTCGGCAACACGCCCGCGCCAAGCGCCACGCCCGTCGCCCAGCCGCTGCCGACGGCCGAACCGACGCCGCTGGCGATGCCCTTCGCCGACCCAGGGATCACCCAACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCAGCGAGCGTGGCGGCGCCGACGCCGCCGGCAAGCGCCGCCGCGTCGGCCGGCGGCGACCTGCTGCAAGCGTTCCTGCGCGGCGCCGGCATGACCCAGTTGAAGGTCGACCCGGCCGGCGCCGAAGCGCAGATGGAAGCCATCGGCCGCAGCTATCGCGGCCTGGTGGAAGGACTGGTGGACGTGCTGCGCGCGCGGGCCAGCCTGAAGGGCGAGTTCCGCATGGCGCAGACCATGATCCAGCCGGTGCAGAACAACCCGCTGAAGTTCGCGCCGAACGTCGACGAGGCCATGCTGCTCCTGCTGCGCCGCGACAACCAGGCGTTCATGGCGCCGGATCGCGCGGTGGCCGACAGCTTCGAAGACCTCAAGGCGCACCAGCTGGCGGTGATGGCCGGCGTGCAGGCCGCCATCCGCCACCTGCTGGCGCGCTTCGAACCGGCCGCGCTGGAAGCCCGCTTCGGCAAGCCGGCCGGGCTTTCCGGCCTGCTGCCGGGGGCCCGCCAGGCACAGAACTGGGACAGTTTCACCGAGCTGTACGCGAAGATCCTGCGCGAGGCGGAGGACGACTTCCAGGAGCTTTTCGGCCGCGAATTCAGCCGCGCCTACGAGGAACACAGCGCTCGACTACGGCGTTCCTGA MPLRLTITSYHKLTPGQCSEKVLDQGQLTIGRGPDNDWVLPDPERLVSSRHCTILNRDGVYYLTDTSTNGVLLVNAGHRLRRGNSEPLQDGETVRLGEYDILVQLGHDIALPGSGNPQTDPFTSFDALMSRQAAGSAPAFAEPAPTPHPAVTAHFQGGSPLDTKPDLFDFLTPPPPGAAPRPDHVPAEQHDFRPPEPVIPPPPATTPAPPPAGGAPLIPADWDPFAELLGNTPAPSATPVAQPLPTAEPTPLAMPFADPGITQQPQPQPQPQPQPQPQPQPQPQPASVAAPTPPASAAASAGGDLLQAFLRGAGMTQLKVDPAGAEAQMEAIGRSYRGLVEGLVDVLRARASLKGEFRMAQTMIQPVQNNPLKFAPNVDEAMLLLLRRDNQAFMAPDRAVADSFEDLKAHQLAVMAGVQAAIRHLLARFEPAALEARFGKPAGLSGLLPGARQAQNWDSFTELYAKILREAEDDFQELFGREFSRAYEEHSARLRRS Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0082 CDS 100124 101158 + hypothetical protein Class 4 NP_248772.1 15595280 Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] TIGR03363|VI_chp_8|type VI secretion-associated protein, ImpA family|hypoth_equivalog|4.5e-146||No Data|No Data PF06812|ImpA-rel_N, ImpA-related N-terminal|53|113|5e-13 COG3515|COG3515, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3515|COG3515, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3515|COG3515, Uncharacterized protein conserved in bacteria [Function unknown]. GTGCTGGATGTACCCGTTTTGCTGGCTGCCGTATCCCCGGACTCGCCCTGTGGCGACGATCTGGAGTACGACGCCGCGTTCCTCGAACTCGAACGCATCGCCCAGGGCCAACCCGAGCGCCAGATGGGCGATGCCGTGCTGCCCGCCGAGCCGCCGGAGTGGCCGCGCGTACGCGCGCTGGCCAGCGAACTGTTCGGCCGTAGCAAGGACCTGCGGGTAGCCAACCTGCTGCTGCAGAGCAACGTCGCCCTCGACGGCCTGGACGGGCTCGCCGACGGCCTGCTGCTGGTCCGCGAGCTGCTCGGCCAGTACTGGGACGGCGTCTATCCGTTGCTCGACGCCGATGACGACAACGACCCCACCTTCCGTATCAACGCCCTCACCGGCCTGGTCGCCGAACCGCTGCTGCAACTGGTCTGGGCGATCCCGCTGGTGCGCTCGCGGGCGTTCGGCCCGGTCAACCTGCGCGCCGCGCTGAACGCCGCCGGGCTGCAACGCTTCGCCAGCGAGACCCTGAGTCCCGAGCAGATCGCCGGCGCCTTCGCCGATGCCGACGCCGATGCGCTGGCCGCCACCCGGCGCGCCCTGGATGGCGCCCAGGAACATGCCCTGGCCATCGAGAGCGGCGTCGCCGAACGGGTCGGCTCGGCCCAGGGACTCGACCTCGGTCCCCTTCGTCAACTGCTGCGCCAGGCCCTCCAGGTGTTCGACCTGTACGGCCCGCAGGGCGCCGGCGAGTCCTTGGCGCCGGGTGCCGAGGCGGTCGCCGACGAGCAGGTGGGTGCCGCGCCTGTCGCAGCCGTCGCCGCGCCGGCACCGCGAGCCAGCGGCGAGATCGCCAACCGCGAAGACGTCCTGCGCCAGCTCGATCGCCTGCTCGAGTATTACGTTCGCCACGAGCCGTCGAGTCCGGTGCCGGTGCTGCTCAAGCGCGCCAAGACACTGGTGACGGCCGACTTCGCCGAAATCGTGAGGAATCTCATCCCCGATGGGATTTCCCAGTTCGAAACCCTGCGAGGCCCGGAAAGCGAGTAA MLDVPVLLAAVSPDSPCGDDLEYDAAFLELERIAQGQPERQMGDAVLPAEPPEWPRVRALASELFGRSKDLRVANLLLQSNVALDGLDGLADGLLLVRELLGQYWDGVYPLLDADDDNDPTFRINALTGLVAEPLLQLVWAIPLVRSRAFGPVNLRAALNAAGLQRFASETLSPEQIAGAFADADADALAATRRALDGAQEHALAIESGVAERVGSAQGLDLGPLRQLLRQALQVFDLYGPQGAGESLAPGAEAVADEQVGAAPVAAVAAPAPRASGEIANREDVLRQLDRLLEYYVRHEPSSPVPVLLKRAKTLVTADFAEIVRNLIPDGISQFETLRGPESE Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0083 CDS 101247 101765 + conserved hypothetical protein Class 4 NP_248773.1 15595281 5-gene cluster in PA01 contains 4 genes homologous to a 4-gene cluster in Edwardsiella ictaluri 61% similar to putative 19.5 kDa protein [Edwardsiella ictaluri] Hypothetical, unclassified, unknown Unknown[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0033103|protein secretion by the type VI secretion system|IEA ; molecular_function|GO:0003674|molecular_function|IEA TIGR03358|VI_chp_5|type VI secretion protein, VC_A0107 family|hypoth_equivalog|5e-83||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF05591|DUF770, Protein of unknown function (DUF770)|10|166|2e-60 COG3516|COG3516, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3516|COG3516, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3516|COG3516, Uncharacterized protein conserved in bacteria [Function unknown]. ATGGGAAGCACTACCAGCAGTCAGAAGTTCATCGCCAGGAACCGGGCGCCACGCGTGCAGATCGAGTACGACGTGGAGCTGTACGGTGCCGAGAAGAAGGTCCAGCTGCCCTTCGTCATGGGCGTCATGGCCGACCTCGCCGGCAAGCCCGCCGAACCCCAGGCGGCGGTCGCCGACCGCAAGTTCCTGGAGATCGACGTGGACAACTTCGATGCCCGGCTGAAGGCGATGAAGCCGCGGGTGGCCTTCAACGTACCGAACGTGCTGACCGGCGAAGGCAACCTGAGCCTGGACATCACCTTCGAGAGCATGGACGACTTCAGCCCCGCCGCGGTGGCGCGCAAGGTCGATTCGCTGAACAAGCTGCTCGAGGCGCGTACCCAGCTGGCCAACCTGCTGACCTACATGGACGGCAAGACCGGCGCCGAGGAAATGATCATGAAGGCGATCAAGGACCCGGCCCTGCTTCAGGCCCTGGCCAGCGCGCCGAAGCCCAAAGACGACGAGCCGCAGGCGTAA MGSTTSSQKFIARNRAPRVQIEYDVELYGAEKKVQLPFVMGVMADLAGKPAEPQAAVADRKFLEIDVDNFDARLKAMKPRVAFNVPNVLTGEGNLSLDITFESMDDFSPAAVARKVDSLNKLLEARTQLANLLTYMDGKTGAEEMIMKAIKDPALLQALASAPKPKDDEPQA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0084 CDS 101778 103274 + conserved hypothetical protein Class 4 NP_248774.1 15595282 5-gene cluster in PA01 contains 4 genes homologous to a 4-gene cluster in Edwardsiella ictaluri 66% similar to putative 54.5 kDa protein [Edwardsiella ictaluri] Hypothetical, unclassified, unknown Unknown[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0033103|protein secretion by the type VI secretion system|IEA ; cellular_component|GO:0033104|type VI protein secretion system complex|IEA ; molecular_function|GO:0003674|molecular_function|IEA TIGR03355|VI_chp_2|type VI secretion protein, EvpB/VC_A0108 family|hypoth_equivalog|0||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF05943|DUF877, Protein of unknown function (DUF877)|67|493|0.0 COG3517|COG3517, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3517|COG3517, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3517|COG3517, Uncharacterized protein conserved in bacteria [Function unknown]. ATGGCCGAATTGAGCACCGAGAACCTGGCCCAGGGCCAGACCACCACCGAGCAGACCAGTGAGTTCGCCAGCCTGCTGCTGCAGGAGTTCAAGCCCAAGACCGAGCGCGCCCGCGAAGCGGTGGAGACCGCCGTGCGGACCCTCGCCGAGCATGCCCTGGAGCAGACCAGCCTGATCTCCAACGACGCGATCAAGTCGATCGAGTCGATCATCGCGGCGCTTGACGCCAAGCTCACCGCGCAGGTCAACCTGATCATGCACCACGCCGACTTCCAGCAACTGGAAAGCGCCTGGCGCGGCCTGCACTACCTGGTCAACAACACCGAGACCGACGAGCAACTGAAGATCCGCGTGCTGAACATCTCCAAGCCGGAGCTGCACAAGACCCTGAAGAAATTCAAGGGCACCACCTGGGACCAGAGCCCGATCTTCAAGAAGCTCTACGAAGAGGAATACGGCCAGTTCGGCGGCGAGCCCTATGGCTGCCTGGTCGGCGACTACTACTTCGACCAGTCGCCGCCGGACGTCGAGCTGCTCGGCGAGATGGCGAAGATCTCCGCCGCCATGCACGCGCCGTTCATCTCCGCCGCCTCGCCGACGGTGATGGGCATGGGTTCCTGGCAGGAACTGTCCAACCCGCGCGACCTGACCAAGATCTTCACCACCCCGGAATACGCCGGCTGGCGTTCGCTGCGCGAGTCCGAGGACTCCCGCTACATCGGCCTGACCATGCCGCGCTTCCTGGCGCGCCTGCCCTACGGGGCGAAGACCGATCCGGTGGAAGAGTTCGCCTTCGAGGAAGAAACCGACGGCGCCGACAGCAGCAAGTACGCCTGGGCCAACTCGGCCTACGCGATGGCGGTCAACATCAACCGCTCCTTCAAGCTCTACGGCTGGTGCTCGCGGATCCGCGGCGTCGAGTCCGGCGGCGAGGTGCAGGGCCTGCCGGCGCACACCTTCCCCACCGACGACGGCGGCGTGGACATGAAGTGCCCGACCGAGATCGCCATTTCCGACCGCCGCGAGGCGGAGCTGGCGAAGAACGGCTTCATGCCGCTGCTGCACAAGAAGAACACCGACTTCGCCGCCTTCATCGGCGCGCAGTCGCTGCAGAAACCCGCCGAGTACGACGATCCGGACGCCACCGCCAACGCCAACCTGGCGGCGCGCCTGCCCTACCTGTTCGCCACCTGCCGCTTCGCCCATTACCTGAAGTGCATCGTTCGCGACAAGATCGGTTCCTTCAAGGAGAAGGACGAGATGCAGCGCTGGCTGCAGGACTGGATCCTCAACTACGTCGACGGCGACCCGGCCCACTCCACCGAGACCACCAAGGCCCAGCACCCGCTGGCGGCGGCCGAAGTGGTGGTGGAGGAAGTCGAAGGCAATCCGGGTTACTACAACTCGAAGTTCTTCCTTCGCCCGCACTACCAGCTCGAGGGACTGACGGTATCGCTACGCCTGGTATCCAAGCTGCCTTCGGCCAAAGAGGCCTGA MAELSTENLAQGQTTTEQTSEFASLLLQEFKPKTERAREAVETAVRTLAEHALEQTSLISNDAIKSIESIIAALDAKLTAQVNLIMHHADFQQLESAWRGLHYLVNNTETDEQLKIRVLNISKPELHKTLKKFKGTTWDQSPIFKKLYEEEYGQFGGEPYGCLVGDYYFDQSPPDVELLGEMAKISAAMHAPFISAASPTVMGMGSWQELSNPRDLTKIFTTPEYAGWRSLRESEDSRYIGLTMPRFLARLPYGAKTDPVEEFAFEEETDGADSSKYAWANSAYAMAVNINRSFKLYGWCSRIRGVESGGEVQGLPAHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFMPLLHKKNTDFAAFIGAQSLQKPAEYDDPDATANANLAARLPYLFATCRFAHYLKCIVRDKIGSFKEKDEMQRWLQDWILNYVDGDPAHSTETTKAQHPLAAAEVVVEEVEGNPGYYNSKFFLRPHYQLEGLTVSLRLVSKLPSAKEA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0085 CDS 103350 103838 + hcp1 Hcp1 Class 1 NP_248775.1 15595283 PMID:16763151 5-gene cluster in PA01 contains 4 genes homologous to a 4-gene cluster in Edwardsiella ictaluri ; Part of Hcp1 secretion island I (HSI-I) 47% similar to putative 17.8 kDa protein [Edwardsiella ictaluri] Secreted Factors (toxins, enzymes, alginate) Unknown[Class 3] ; Extracellular[Class 1] ; Extracellular[Class 3] biological_process|GO:0009405|pathogenesis|IEA ; biological_process|GO:0052048|interaction with host via secreted substance|IEA ; molecular_function|GO:0003674|molecular_function|IEA TIGR03344|VI_effect_Hcp1|type VI secretion system effector, Hcp1 family|subfamily|2.9e-09||Cellular processes|Pathogenesis PF05638|DUF796, Protein of unknown function (DUF796)|6|136|3e-49 COG3157|Hcp, Hemolysin-coregulated protein (uncharacterized) [Function unknown]. ; COG3157|Hcp, Hemolysin-coregulated protein (uncharacterized) [Function unknown]. ; COG3157|Hcp, Hemolysin-coregulated protein (uncharacterized) [Function unknown]. ATGGCTGTTGATATGTTCATCAAGATCGGCGACGTCAAGGGTGAGTCCAAGGACAAGACTCACGCCGAGGAAATCGACGTGCTGGCATGGAGCTGGGGCATGTCCCAGTCCGGGTCGATGCACATGGGCGGTGGCGGCGGCGCCGGCAAGGTCAACGTGCAGGACCTGTCGTTCACCAAGTACATCGACAAGTCCACGCCCAACCTGATGATGGCCTGCTCCAGCGGCAAGCACTATCCGCAGGCGAAGCTGACCATCCGCAAGGCCGGCGGCGAGAACCAGGTCGAGTACCTGATCATCACCCTGAAGGAAGTCCTGGTGTCCTCGGTGAGCACCGGCGGCAGCGGTGGCGAGGATCGCCTGACCGAGAACGTGACCCTGAACTTCGCCCAGGTCCAGGTCGACTACCAGCCGCAGAAGGCGGATGGCGCGAAGGACGGCGGTCCGGTCAAGTACGGCTGGAACATCCGCCAGAACGTGCAGGCCTGA MAVDMFIKIGDVKGESKDKTHAEEIDVLAWSWGMSQSGSMHMGGGGGAGKVNVQDLSFTKYIDKSTPNLMMACSSGKHYPQAKLTIRKAGGENQVEYLIITLKEVLVSSVSTGGSGGEDRLTENVTLNFAQVQVDYQPQKADGAKDGGPVKYGWNIRQNVQA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0086 CDS 104006 104851 + hypothetical protein Class 4 NP_248776.1 15595284 Flanked by genes homologous to a 4-gene cluster in Edwardsiella ictaluri Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] PF07024|ImpE, ImpE protein|25|276|6e-92 COG4455|ImpE, Protein of avirulence locus involved in temperature-dependent protein secretion [General function prediction only]. ; COG4455|ImpE, Protein of avirulence locus involved in temperature-dependent protein secretion [General function prediction only]. ; COG4455|ImpE, Protein of avirulence locus involved in temperature-dependent protein secretion [General function prediction only]. ATGGCCGACCCTTCATTCGCATCCGGGCGCCTGGGCTCCCGGCTACAGGGAAGTATCGCGATGATCGCCGAAGAACTGTTGCGCGCCGGGCGCCTGGACGATGCCTTGAAAGCCTTGCAGGAACAGGTGCGCAGCCAGCCGTCGAACGCTACCCTGCGGATCTTCCTGTTCCAGCTGCTGGCCGTGATGGGCCAGTGGGCGCGGGCGCAGAACCAGCTCAAGGTGGTCGGCGAACTGGATGCCTCGGCGCTGCCGATGGTACAGACCTACTCCACCGCCATCGACTGCGAGGCGCTGCGCCGCGAGGTGTTCGCCGGGCGCCTGACGCCGGTGATCCTCGGCCAGCCGGCGGAATGGATCGCGCCGCTGTTGCAGGCCCTGAGCCTGGACGCCGAAGGCCATGGCGAGGCCGCCCAGGCCCTGCGCGAGCAGGCCTTCGACGCCGCGCCGGCGGTGCCCGGTCGGATCGGCGAAGCGCCGTTCGCCTGGCTGGCGGATGCCGACACGCGCCTCGGCCCGGTGCTCGAGGTAATCGTCAACGGTCGCTATGCCTGGTTGCCGATGAGCAACCTGCGCAGCCTCAAGGTCGAGGCGCCGAGCGACCTGCGCGATCTGGTCTGGCTGCCGGCCGAACTGACCCTGGCCAACGGTGGCGCCACCGTCGCGCTGCTGCCGGCGCGCTACGCGGAAACCGTCGAGCACGGCGACGACGCCGCGCGCCTGGGACGCAAGACCGAATGGCTGGACAGCGGCCTGCCGGTCGGCCAGCGGCTGTTCGTCACCGATGCCGGCGAGACCGCGCTGTTCGACCTGCGTGAACTGGACTTCGAGCCGACGGACGCCTGA MADPSFASGRLGSRLQGSIAMIAEELLRAGRLDDALKALQEQVRSQPSNATLRIFLFQLLAVMGQWARAQNQLKVVGELDASALPMVQTYSTAIDCEALRREVFAGRLTPVILGQPAEWIAPLLQALSLDAEGHGEAAQALREQAFDAAPAVPGRIGEAPFAWLADADTRLGPVLEVIVNGRYAWLPMSNLRSLKVEAPSDLRDLVWLPAELTLANGGATVALLPARYAETVEHGDDAARLGRKTEWLDSGLPVGQRLFVTDAGETALFDLRELDFEPTDA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0087 CDS 104853 105362 + hypothetical protein Class 4 NP_248777.1 15595285 5-gene cluster in PA01 contains 4 genes homologous to a 4-gene cluster in Edwardsiella ictaluri 45% similar to putative 18.8 kDa protein [Edwardsiella ictaluri] Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Unknown[Class 3] biological_process|GO:0033103|protein secretion by the type VI secretion system|IEA ; molecular_function|GO:0003674|molecular_function|IEA TIGR03357|VI_zyme|type VI secretion system lysozyme-related protein|hypoth_equivalog|1.4e-40||No Data|No Data PF04965|GPW_gp25, Gene 25-like lysozyme|36|148|8e-15 COG3518|COG3518, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3518|COG3518, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3518|COG3518, Uncharacterized protein conserved in bacteria [Function unknown]. ATGGCCGAACTGACCCTCCAGGAGCGCCTGCAGCCGTCGCTGCTCGACCGCCTCACCGACGACGAGCCGGGCAACCTCAAGGAAGCCGCGGAGCGCCGGGTGCTGACCCTGAACCAGCTGAAGGCCTCGGTGCTGCGCGACCTGGCGTGGCTGTTCAACACCACTTCGCTGTTCGACCACGGCCCCGCCGCACGGATGCCGGCCGGCAACTCGGTGCTCAACTACGGGCTGCCGGCGCTGGCCGGGCACACCGCGTCGAGCGTCGACGTGCATGCCATCGAGGCGCTGCTCACCGAGACCATCGCCACCTTCGAGCCGCGCATCATCCGTTCTTCGTTGCGGGTGCGCGCGCAACTGCTGCCCGGCGAGATGGACCACAACGCCCTGAGCTTCGAGATCGAGGGCGACCTCTGGGCCGAACCGGCGCCGCTGCGCCTGCTGCTGACCACCAACCTGGACCTGGAGACCGGCCACGTGCGCGTCGCCCAGGGCGAGCGGAGGCGTACATGA MAELTLQERLQPSLLDRLTDDEPGNLKEAAERRVLTLNQLKASVLRDLAWLFNTTSLFDHGPAARMPAGNSVLNYGLPALAGHTASSVDVHAIEALLTETIATFEPRIIRSSLRVRAQLLPGEMDHNALSFEIEGDLWAEPAPLRLLLTTNLDLETGHVRVAQGERRRT Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0088 CDS 105359 107218 + hypothetical protein Class 4 NP_248778.1 15595286 Hypothetical, unclassified, unknown Unknown[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0033103|protein secretion by the type VI secretion system|IEA ; molecular_function|GO:0003674|molecular_function|IEA TIGR03359|VI_chp_6|type VI secretion protein, VC_A0110 family|hypoth_equivalog|0||No Data|No Data PF05947|DUF879, Bacterial protein of unknown function (DUF879)|5|617|0.0 COG3519|COG3519, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3519|COG3519, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3519|COG3519, Uncharacterized protein conserved in bacteria [Function unknown]. ATGAACCCGCGCCTGCTCGAGTACTACAACCAGGAATTGCAACACATCCGCGAAAGCGCCGCGGAGTTCGCCGAGGAATTCCCGAAGATCGCCGGGCGCCTGTCGCTGTCCGGCTTCGAGTGCGCCGACCCCTACGTCGAGCGCCTGCTGGAAGGCTTCGCCTATCTCACCGCGCGGGTCCAGCTGAAGCTCGACGCGGAGTACCCGACCTTCACCCACAACCTGTTGGAAATCGCCTACCCGCACTACCTGGCGCCGACCCCGTCGATGACCGTGGTGCAGTTGCGCCCGGACCCCAACGAAGGCGCCCTGAGCAGCGGCTTCAGCATCGAGCGCGGGGCCTCCCTGCGCGGCCAGCTCGGCCCCGATGACCAGACCGCCTGCGAATACCGCACCGCCCACCCGGTGACCCTGTGGCCGCTGGAAGTGGCCCAGGCCGACTACTTCGGCAATCCCGCCGCGGTGCTCGGCCGCCTCGCCGCCAGCGAGCCGCGGGCCAAGGCCGGCCTGCGCATCCGCCTGCGCAGCGGCGCCGGCATCCCGTTCGACAGCCTGTCGCTGGACGCCCTGCCGCTCTACCTGCACGGCGCCGACGAACAACCCTACCGCCTCTACGAACAATTGCTCGGCAACGCCTGCGCGGTGTTCGTCCGCGCCCCGGACAATGCCTGGGTCGAACGCCTGCCGACGAGCAGCCTGCGTGCGCGCGGCTTCGACGACGAGGACGCGCTGCTGCCGGTGGTGCCGCGGGCGTTCCAGGGCTACCGCCTGCTGCAGGAATACTTCGCCCTGCCGGCGCGCTTCCTGTTCGTCGAGTTCTCCGGCCTGAACCGCGCCCTGCGTCGATGCCACGGCGAGGAGCTGGAACTGGTCGTGCTGTTCGGCAAGCACGACCAGCGCCTGGAGGGCACGGTGGACGCAGAGCAACTGGTGCCGTTCTGCACCCCGGCGATCAACCTGTTCCCGCGCCGCTGCGACCGCATCCACCTGTCCGACCGGGTCAACGAGCATCACGTGATCGTCGACCGCACCCGTCCGCTGGATTTCGAGGTGCATTCGCTGCAACAGGTGAGCGGCCACGGCAGCGGTCCGGAGCAACCCTTCCAACCGTTCTACGCGGTGCGCGACCCGGCGCGCTACGGCCGCGAGCAGGCCTACTTCAGAGTGCGCCGCGAACCGCGCGTGCTGTCCAGCAAGCAGCGGCGCAAGGGCCCGCGCTCGACCTACGTCGGCAGCGAGACCTTCGTCGCCCTGGTCGACGCCAACCAGGCGCCCTATCGCCACGACCTGCGCCAGCTCGGCATCGCCGCGCTGTGCACCAACCGCGACCTGCCGCTGTTCATGCCGATCGGCGCGCACAAGAGCGACTTCACCCTGGAGGACAGCGCGCCGGTCATGCAGGTGCGCTGCCTCGCCGGACCGAGCCGGCCGCGCGCCAGCCGTGCCCACGATGCCAGCGCCTGGCGGCTGATCAGCCAGCTGTCGCTGAACTACCTGTCGCTGGCCGAGCGCGGCCAGGGCGCCGCCGCCCTGCGCGAGCTGCTGCGGCTCTACGGCGACAGCGGCGATCCGGCGCTGCAATTGCAGATCGAGGGCCTGCGCGAGGTCAGCAGCAAGCCTTGCACGCGGCGCCTGCCGATGCCCGGGCCGATCGTCTTCGGCCGTGGCCTGGAGATCACCCTGGACTTCGACGAGAACGCGTTCCGCGGCACCGGGGTGTTCCTTCTCGGCGCTGTGTTCGAGCGCTTCCTGGCACGCTACGTGTCGATCAACAGCTTTACCGAGACGGTGCTGCGCACCGGCGAACGGGGCGAGGTGATGAGATGGCAGGCGAAGCCGGGCAGCCGTCCGAACCTCTGA MNPRLLEYYNQELQHIRESAAEFAEEFPKIAGRLSLSGFECADPYVERLLEGFAYLTARVQLKLDAEYPTFTHNLLEIAYPHYLAPTPSMTVVQLRPDPNEGALSSGFSIERGASLRGQLGPDDQTACEYRTAHPVTLWPLEVAQADYFGNPAAVLGRLAASEPRAKAGLRIRLRSGAGIPFDSLSLDALPLYLHGADEQPYRLYEQLLGNACAVFVRAPDNAWVERLPTSSLRARGFDDEDALLPVVPRAFQGYRLLQEYFALPARFLFVEFSGLNRALRRCHGEELELVVLFGKHDQRLEGTVDAEQLVPFCTPAINLFPRRCDRIHLSDRVNEHHVIVDRTRPLDFEVHSLQQVSGHGSGPEQPFQPFYAVRDPARYGREQAYFRVRREPRVLSSKQRRKGPRSTYVGSETFVALVDANQAPYRHDLRQLGIAALCTNRDLPLFMPIGAHKSDFTLEDSAPVMQVRCLAGPSRPRASRAHDASAWRLISQLSLNYLSLAERGQGAAALRELLRLYGDSGDPALQLQIEGLREVSSKPCTRRLPMPGPIVFGRGLEITLDFDENAFRGTGVFLLGAVFERFLARYVSINSFTETVLRTGERGEVMRWQAKPGSRPNL Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0089 CDS 107182 108228 + hypothetical protein Class 4 NP_248779.1 15595287 Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0033103|protein secretion by the type VI secretion system|IEA ; molecular_function|GO:0008565|protein transporter activity|IEA TIGR03347|VI_chp_1|type VI secretion protein, VC_A0111 family|hypoth_equivalog|2.6e-154||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF06996|DUF1305, Protein of unknown function (DUF1305)|19|320|1e-109 COG3520|COG3520, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3520|COG3520, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3520|COG3520, Uncharacterized protein conserved in bacteria [Function unknown]. ATGGCAGGCGAAGCCGGGCAGCCGTCCGAACCTCTGAACCTGCTCGCCGGGATGGCGGCGGCGCCCTGGGACTATGACTTCTTCCAGGCGCTGCGGCGCATCGAGTGCGAGTCGCCGCAACTGCCGCGCCTCGGTCATTCGGTGCGGCTGGCGGACGACCCGCTGCGTCTCGGGCAGAAGCCCGACTGCACCTTCGCGCCCTCGACCCTGGCCTCGGTGAGCCAGGCCGGCACCGCTGCGGTGCCGCGCCTGGACCAGTTCTTCTTCGGCCTCACCGGCCCCAACGGGCCGCTGCCGCTGCACCTCACCGAATACGCCCGGGAACGCCAGCGCAACGTCAACGACGCGACCTTCAAGCGCTTCATGGACGTCTTCCACCACCGCCTGCTGACCCTGTTCTACCGGGCCTGGGCCGAGGCGCGGCCGGAGATCAGCCACGACCGGATCGACGACGACTACTGGTCGGCGCGCCTCGCCGCGCTCTCCGGGCGCGGCATGCCGAGCCTGCGGGGGCGCGAGCCGCTGGCGGATACCGCACGCTACTACTACACCGGCCACCTCGCCGCGCAGACCCGCTACCCGGACGGCCTGCGGGTGATCCTCGCGGAGTATTTCGAGGTCCCGGTGGCGGTCGAGGAATACGTCGGCCAATGGCTGGAGCTGCCCGAGCGCAGCCGCCTCGGCGTCGACTCGACGAGCCTGGGCATGGACGTCTGCCTGGGCACCCACGTCTGGGACCGCCAGCACAAGTTCCGCCTGCGCCTGGGGCCGCTGGACCTCGATCAATACCAGCGCTTCCTGCCCGACGGCGACCACTTCGTCGAGCTGGCCGCCTGGGTCGCCGAATACCTGGGCGAGGAGCTGGACTGGGACGTCAACCTGGTCCTGCAACGCCACGAAGTACCCCCGCTGGGCCTGCAGGGCGGCGGGCGGCTCGGTTTCAACACCTGGCTGGGCGATCCCGGCCAGGACGCCAGGGATCTACTGCTGGCCCGCCAGTACGCCACTGCGCGGCCGCACGAGCACAAGGAGAAGGAACATGAGTGA MAGEAGQPSEPLNLLAGMAAAPWDYDFFQALRRIECESPQLPRLGHSVRLADDPLRLGQKPDCTFAPSTLASVSQAGTAAVPRLDQFFFGLTGPNGPLPLHLTEYARERQRNVNDATFKRFMDVFHHRLLTLFYRAWAEARPEISHDRIDDDYWSARLAALSGRGMPSLRGREPLADTARYYYTGHLAAQTRYPDGLRVILAEYFEVPVAVEEYVGQWLELPERSRLGVDSTSLGMDVCLGTHVWDRQHKFRLRLGPLDLDQYQRFLPDGDHFVELAAWVAEYLGEELDWDVNLVLQRHEVPPLGLQGGGRLGFNTWLGDPGQDARDLLLARQYATARPHEHKEKEHE Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0090 CDS 108221 110929 + clpV1 ClpV1 Class 1 NP_248780.1 15595288 PMID:16763151 Part of Hcp1 secretion island I (HSI-I) 56% similar to putative ClpB protein [Synechococcus sp.] PS00870: Chaperonins clpA/B signature 1 Translation, post-translational modification, degradation ; Chaperones & heat shock proteins ; Protein secretion/export apparatus Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0033103|protein secretion by the type VI secretion system|IEA ; cellular_component|GO:0033104|type VI protein secretion system complex|IEA ; molecular_function|GO:0042623|ATPase activity, coupled|IEA TIGR03345|VI_ClpV1|type VI secretion ATPase, ClpV1 family|equivalog|0||Protein fate | Cellular processes|Protein and peptide secretion and trafficking | Pathogenesis PF07724|AAA_2, ATPase family associated with various cellular activities (AAA)|631|796|4e-61 COG0542|ClpA, ATPases with chaperone activity, ATP-binding subunit [Posttranslational modification, protein turnover, chaperones]. ; COG0542|ClpA, ATPases with chaperone activity, ATP-binding subunit [Posttranslational modification, protein turnover, chaperones]. ; COG0542|ClpA, ATPases with chaperone activity, ATP-binding subunit [Posttranslational modification, protein turnover, chaperones]. ATGAGTGAGATCAGTCGCGTTGCGCTGTTCGGCAAGCTGAACAGCCTGGCCTACAAGGCCATCGAGGCCGCCACGGTATTCTGCAAGCTGCGCGGCAATCCCTATGTCGAGCTGGTGCACTGGTTCCACCAGATCCTCCAGTTGCCGGACTCGGACCTGCACCAGATCGTCCGCCAGTCCGGGATCGACCCGGCGCGCCTGGCCAAGGACCTGACCGAGGCCCTCGACCGTCTGCCGCGCGGCTCGACCTCGATCACCGACCTGTCCTCCCATGTCGAGGAAGCGGTGGAGCGCGGCTGGGTCTACGGCAGCCTGATGTTCGGCGAGAGCCAGGTGCGCACCGGCTACCTGGTGATCGGCATCCTCAAGACGCCGAGCCTGCGCCATGCCCTCACCGGGCTGTCGGCGGAATTCGCCAAGCTCAAGGTCGAGGCGCTCACCGAGCGCTTCGACGAGTACGTCGGCGCCTCGCCGGAGAACGGCCTGTCGGCCAGCGACGGCTTCAACGCCGGCGCCGCCCCGGGCGAGGCCAGCGGCGCCCTGGCGCCGAGCGCGATGGGCAAGCAGGAGGCGCTCAAGCGCTTTACCGTGGACCTCACCGAGCAGGCCCGCAGCGGCAAGCTCGACCCCATCGTCGGGCGTGACGAGGAGATCCGCCAGTTGGTGGACATCCTCATGCGCCGCCGGCAGAACAACCCGATCCTCACCGGCGAGGCCGGCGTCGGCAAGACCGCGGTGGTGGAAGGCTTCGCCCTGCGCATCGTCGCCGGCGACGTCCCGCCGGCGCTGAAGGACGTCGAACTGCGCGCCCTCGACGTCGGCCTGCTGCAGGCCGGGGCGAGCATGAAGGGCGAGTTCGAGCAGCGCCTGCGCCAGGTGATCGAAGACGTGCAGAGTTCCGAGAAGCCGATCATCCTGTTCATCGACGAAGCCCACACCCTGGTCGGCGCCGGTGGCGCGGCCGGCACCGGCGACGCCGCCAACCTGCTCAAGCCGGCCCTGGCGCGCGGCACCCTGCGCACCGTGGCAGCGACCACCTGGGCCGAGTACAAGAAGCACATCGAGAAGGACCCGGCGCTGACCCGGCGTTTCCAGGTGGTGCAGGTGGACGAGCCGTCCGAGCACAAGGCCATCCTGATGATGCGCGGCGTCGCGTCGACCATGGAGAAGCACCACCAGGTGCAGATCCTCGACGAGGCGCTGGAGGCGGCGGTCCGGCTGTCGCACCGCTACATCCCGGCGCGCCAGCTGCCGGACAAGTCGGTGAGCCTGCTGGATACCGCCTGCGCGCGCACCGCCATCAGCCTGCACGCGGTGCCGGCCGAGGTCGACGATAGCCGCCGTCGCATCGAGGCGCTGGAAACCGAGCTGGCGATCATCCGCCGCGAGAGCGCCATCGGCGTCGCCACCGCCGAACGCCAGCGCAACGCCGAGACCCTGCTGGCCGAGGAGCGCGAGCGCCTGGCCGCCCTGGAGCAGCGCTGGGCCGAGGAAAAACGCCTGGTCGACGAACTGCTGGAGACCCGCGCCCGTCTGCGTGCCGCCGCCGAAGCGGTGGATGCCGGCGGCGTGCCGCTGGGCGAAGGCGAGGTGCGTCTCGACGAGGAACAGCGCCAGGCGCTGCATGCGCGGCTGGCGGAGCTGCAGGCGCAACTGAGCGCGTTGCAGGGCGAAGAGCCGCTGATCCTGCCGACCGTGGACTACCAGGCGGTGGCCTCGGTGGTCGCCGACTGGACCGGCATCCCGGTCGGCCGCATGGCGCGCAACGAGATCGAGACCGTGCTCAACCTCGACCGGCACCTGAAGAAGCGCATCATCGGCCAGGACCACGCGCTGGAGATGATCGCCAAGCGCATCCAGACTTCCCGCGCCGGCCTCGACAACCCGAGCAAGCCGATCGGCGTGTTCATGCTCGCCGGCACCTCCGGGGTGGGCAAGACCGAGACCGCACTGGCCTTGGCCGAGGCCATGTACGGCGGCGAGCAGAATGTCATCACCATCAACATGAGCGAGTTCCAGGAAGCCCACACCGTCTCCACCCTCAAGGGCGCCCCGCCCGGCTACATCGGCTACGGCGAGGGTGGCGTGCTGACCGAGGCGGTGCGTCGCAAGCCCTACAGCGTGGTGCTGCTGGATGAAGTGGAGAAGGCCCACCCGGATGTCCACGAGATCTTCTTCCAGGTCTTCGACAAGGGCGTGATGGAGGACGGCGAAGGCCGGGTGATCGACTTCAAGAACACCCTGATCCTGCTCACCACCAACGCCGGCACCGAGATGATCGCCAGCCTCTGCGCCGATCCGGAACTGATGCCCGAGCCGGAAGCCATCGCCAAGTCGCTGCGCGAACCGCTGCTGAAGATCTTCCCGCCGGCGCTGCTCGGCCGCCTGGTGACCATCCCCTACTACCCGCTCAGCGACGACATGCTCAAGGCCATTTCGCGCCTGCAACTGGGGCGGATCAAGAAGCGCGTGGAGGCGACCCACAAGGTGCCGTTCGAGTTCGACGAGGGCGTCGTCGACCTGATCGTCTCGCGCTGCACCGAGACCGAGAGCGGCGGCCGGATGATCGACGCGATCCTCACCAACACGCTGTTGCCGGACATGAGCCGCGAGTTCCTCACCCGCATGCTCGAAGGCAAGCCGTTGGCCGGGGTACGTATCAGTAGCCGCGACAACCAGTTCCACTACGACTTCGCCGAGGCCGAGTGA MSEISRVALFGKLNSLAYKAIEAATVFCKLRGNPYVELVHWFHQILQLPDSDLHQIVRQSGIDPARLAKDLTEALDRLPRGSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLVIGILKTPSLRHALTGLSAEFAKLKVEALTERFDEYVGASPENGLSASDGFNAGAAPGEASGALAPSAMGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAGVGKTAVVEGFALRIVAGDVPPALKDVELRALDVGLLQAGASMKGEFEQRLRQVIEDVQSSEKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPALTRRFQVVQVDEPSEHKAILMMRGVASTMEKHHQVQILDEALEAAVRLSHRYIPARQLPDKSVSLLDTACARTAISLHAVPAEVDDSRRRIEALETELAIIRRESAIGVATAERQRNAETLLAEERERLAALEQRWAEEKRLVDELLETRARLRAAAEAVDAGGVPLGEGEVRLDEEQRQALHARLAELQAQLSALQGEEPLILPTVDYQAVASVVADWTGIPVGRMARNEIETVLNLDRHLKKRIIGQDHALEMIAKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVITINMSEFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQVFDKGVMEDGEGRVIDFKNTLILLTTNAGTEMIASLCADPELMPEPEAIAKSLREPLLKIFPPALLGRLVTIPYYPLSDDMLKAISRLQLGRIKKRVEATHKVPFEFDEGVVDLIVSRCTETESGGRMIDAILTNTLLPDMSREFLTRMLEGKPLAGVRISSRDNQFHYDFAEAE Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0091 CDS 110976 112907 + vgrG1 VgrG1 Class 2 NP_248781.1 15595289 PMID:98361897 ; PMID:9696756 ; PMID:16763151 Part of Hcp1 secretion island I (HSI-I) N-terminal ~500 amino acids 51-53% similar to VgrE and VgrG proteins [E. coli] Hypothetical, unclassified, unknown Unknown[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0033103|protein secretion by the type VI secretion system|IEA ; molecular_function|GO:0003674|molecular_function|IEA TIGR03361|VI_Rhs_Vgr|type VI secretion system Vgr family protein|subfamily_domain|0||No Data|No Data PF04524|DUF586, Protein of unknown function, DUF586|366|445|2e-40 COG3501|VgrG, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3501|VgrG, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3501|VgrG, Uncharacterized protein conserved in bacteria [Function unknown]. ATGCAACTGACCCGCCTGGTCCAGGTGGATTGCCCGCTGGGGCCGGACGTGCTGCTGTTGCAGCGCATGGAGGGACGCGAGGAACTGGGACGGCTGTTCGCCTACGAGCTGCACCTGGTATCGGAAAATCCCAACCTGCCGCTGGAGCAGTTGCTCGGCAAGCCGATGAGCCTGTCGCTGGAGCTGCCCGGCGGCAGCCGGCGCTTCTTTCACGGCATCGTCGCGCGCTGTAGCCAGGTGGCCGGGCACGGCCAGTTCGCCGGCTACCAGGCCACCCTGCGGCCCTGGCCGTGGCTGCTGACGCGCACCTCGGACTGCCGCATCTTCCAGAACCAGAGCGTGCCGGAGATCATCAAGCAGGTGTTCCGCAACCTCGGCTTTTCCGATTTCGAGGATGCCCTCACGCGCCCCTACCGCGAGTGGGAATACTGCGTGCAGTACCGCGAGACCAGCTTCGACTTCATCAGCCGGCTGATGGAACAGGAAGGCATCTACTACTGGTTCCGCCATGAGCAGAAGCGCCACATCCTGGTGCTCTCCGACGCCTACGGCGCGCATCGCAGCCCGGGTGGCTACGCCAGCGTGCCGTACTACCCGCCGACCCTCGGCCATCGCGAGCGCGACCACTTCTTCGACTGGCAGATGGCACGCGAGGTCCAGCCCGGTTCGCTGACCCTCAACGACTACGACTTCCAGCGCCCCGGCGCGCGCCTGGAGGTGCGTTCGAACATCGCCCGGCCGCACGCGGCGGCCGACTACCCGCTGTACGACTATCCCGGCGAATACGTGCAGAGCCAGGACGGCGAGCAGTACGCGCGCAACCGCATCGAGGCGATCCAGGCGCAGCACGAGCGCGTGCGCCTGCGCGGCGTGGTGCGCGGGATCGGCGCCGGGCACCTGTTCCGCCTGAGCGGCTATCCGCGCGATGACCAGAACCGCGAGTACCTGGTGGTCGGCGCCGAATACCGGGTGGTCCAGGAACTCTACGAAACCGGCAGCGGCGGCGCCGGCTCGCAGTTCGAGAGCGAGCTGGACTGCATCGACGCCAGCCAGTCGTTCCGTCTCCTGCCGCAGACTCCGGTACCGGTGGTGCGGGGTCCGCAGACCGCGGTGGTGGTCGGACCCAAGGGCGAGGAGATCTGGACCGACCAGTACGGCCGGGTCAAGGTGCACTTCCACTGGGATCGCCACGACCAGTCGAACGAGAACAGCTCCTGCTGGATTCGCGTGTCCCAGGCCTGGGCCGGGAAGAACTGGGGTTCGATGCAGATCCCGCGGATCGGCCAGGAAGTGATCGTCAGCTTCCTCGAAGGCGACCCGGACCGGCCGATCATCACCGGGCGGGTCTACAACGCCGAGCAGACGGTGCCCTACGAGCTGCCGGCGAACGCCACCCAGAGCGGGATGAAGAGCCGTTCGAGCAAGGGCGGCACGCCGGCCAACTTCAACGAGATCCGCATGGAGGACAAGAAGGGCGCCGAGCAGTTATACATCCACGCCGAGCGCAACCAGGACAACCTGGTCGAGAACGATGCCTCGCTGTCGGTCGGCCACGACCGCAACAAGAGCATCGGCCACGACGAGCTGGCGCGCATCGGCAACAACCGCACCCGCGCGGTGAAGCTCAACGACACCCTGTTGGTGGGCGGGGCGAAGAGCGACAGCGTCACCGGCACCTACCTGATCGAGGCCGGCGCGCAGATCCGCCTGGTCTGCGGCAAGAGCGTGGTGGAGTTCAACGCCGACGGCACCATCAATATCTCCGGCAGCGCCTTCAACCTCTACGCCAGCGGCAACGGCAACATCGACACCGGCGGCCGCCTCGACCTCAATTCCGGCGGCGCCAGCGAGGTCGACGCCAAGGGCAAGGGCGTGCAGGGCACCATCGACGGCCAGGTACAGGCGATGTTTCCGCCGCCGGCGAAGGGCTGA MQLTRLVQVDCPLGPDVLLLQRMEGREELGRLFAYELHLVSENPNLPLEQLLGKPMSLSLELPGGSRRFFHGIVARCSQVAGHGQFAGYQATLRPWPWLLTRTSDCRIFQNQSVPEIIKQVFRNLGFSDFEDALTRPYREWEYCVQYRETSFDFISRLMEQEGIYYWFRHEQKRHILVLSDAYGAHRSPGGYASVPYYPPTLGHRERDHFFDWQMAREVQPGSLTLNDYDFQRPGARLEVRSNIARPHAAADYPLYDYPGEYVQSQDGEQYARNRIEAIQAQHERVRLRGVVRGIGAGHLFRLSGYPRDDQNREYLVVGAEYRVVQELYETGSGGAGSQFESELDCIDASQSFRLLPQTPVPVVRGPQTAVVVGPKGEEIWTDQYGRVKVHFHWDRHDQSNENSSCWIRVSQAWAGKNWGSMQIPRIGQEVIVSFLEGDPDRPIITGRVYNAEQTVPYELPANATQSGMKSRSSKGGTPANFNEIRMEDKKGAEQLYIHAERNQDNLVENDASLSVGHDRNKSIGHDELARIGNNRTRAVKLNDTLLVGGAKSDSVTGTYLIEAGAQIRLVCGKSVVEFNADGTINISGSAFNLYASGNGNIDTGGRLDLNSGGASEVDAKGKGVQGTIDGQVQAMFPPPAKG Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0092 CDS 113022 113306 - hypothetical protein Class 4 NP_248782.1 15595290 Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] ATGACACCCATCGAATACATCGACCGCGCTCTGGCGCTGGTCGTCGACCGGCTGGCCCGCTATCCGGGATACGAGGTCCTGCTGTCTGCGGAAAAGCAATTGCAGTACATCAGGTCCGTCCTGCTCGACCGCAGCCTGGATCGTTCCGCACTGCACCGGTTGACCCTCGGCAGCATCGCCGTGAAGGAATTCGACGAAACCGACCCGGAACTCTCCAGGGCCCTCAAGGACGCCTACTACGTCGGTATACGCACTGGCCGCGGCCTGAAGGTCGATCTGCCCTGA MTPIEYIDRALALVVDRLARYPGYEVLLSAEKQLQYIRSVLLDRSLDRSALHRLTLGSIAVKEFDETDPELSRALKDAYYVGIRTGRGLKVDLP Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0093 CDS 113303 114595 - hypothetical protein Class 4 NP_248783.1 15595291 PMID:15687295 3 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Hypothetical, unclassified, unknown Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] PF05488|PAAR_motif, PAAR motif|124|148|1e-05 COG4104|COG4104, Uncharacterized conserved protein [Function unknown]. ; COG4104|COG4104, Uncharacterized conserved protein [Function unknown]. ; COG4104|COG4104, Uncharacterized conserved protein [Function unknown]. ATGGATGCGCAAGCCGCCGCCCGACTGGGCGATGAGATAGCCCACGGTTTCGGTGTCGCCGCGATGGTCGCCGGAGCCGTGGCCGGAGCCCTGATCGGCGCCGCCGTGGTCGCCGCCACCGCCGCCACCGGCGGCCTGGCCGCGGTGATCCTGGCCGGTTCGATCGCCGCCGGCGGGCTGTCGATGTTCCAGATCGTCAAGGGCCTGACCACCATCTTCGAGCTACCCGAGCCGACCACCGGGGTGCTCATACGCGGCAGCTTCAACGTCTACGTGAACAGTCGCAACGCGATGCGCGCCGGCGACGACGTTTCCGCCACCTGCAGCGGCCTGCCGCTGAACCATCCGCTGTGGCCGTTCCCGGTGCTGATCGCCGAAGGCAGCGCGACCGTGTACATCAACGGCAAGCCGGCGGCGCGCCTGCAGAGCAAGATGGTCTGCGGCGCGCACATCAAGACCGGCAGCCAGAACACCTTCATCGGCGGCCCCACCGAGCGGGTGGCCTTCGTCCTCGACCTGGAGGAATGGCTGCACACCGGCCTCGAGGCGCTGGGCCTGGCGGCCCTAGCCGGCGGCCTGCTGCTGGCGGCGATGGCCGGGGTCGCGGCGCTGGTTGGAGTGGTCGCCATCGGCGGCCTGATGATGGGCGGCATGGCCCTGCTCGGCGACCTCGGCGACCGCCTCGGTCCCGGCTACCGCGACCTGTTCCAGGGCGTGGCGGGGATGGCATTGCTGGGCTTCGGGCCGAAACTCGCCGGTCGTCGTCCGGCAGCGGTGACCTCCGAAACCGCGCAACGACGCGCCTACCTGAACAACAAGTTCGGTCGTTCCGGCAACCTCGACCACGACATCAACTACCGCGGGAATCGTGAAACCGCCGCCAAGTTCTTCAAGTCGAAGGACATCGATCCTGCCGATGCCGAGTCGTACATGAACGGCCTGGACTTCAACCATCCGGTCCGTGTGGAAACCCTCGCGCCCGGCAAGAACCTGTGGCAGTACCAGTCCCCCGGAGCGCCGCAGGGCAACTGGTATACACTCAGCCCGCGCGTGCAGCCCACGGAGCTGGGAATCAACCCCATGGGCACCAACCGGGCGGCGAACACCATCGAACCCAAGGTCCTCAACTCCTACAGGACGACCCAGAAGGTCGAGGTCCTGCGCAGCACCGCTGCGCCGACCGATGACTTCTGGTCGGTAAAGGGACAGTCATATCCCGCCAAAGGCGGCGCGCAACAACTGTTCTCCAACGAGAAAGGCTCCTTCGGTCTGCTTCCCCGGGAGGGATCATGA MDAQAAARLGDEIAHGFGVAAMVAGAVAGALIGAAVVAATAATGGLAAVILAGSIAAGGLSMFQIVKGLTTIFELPEPTTGVLIRGSFNVYVNSRNAMRAGDDVSATCSGLPLNHPLWPFPVLIAEGSATVYINGKPAARLQSKMVCGAHIKTGSQNTFIGGPTERVAFVLDLEEWLHTGLEALGLAALAGGLLLAAMAGVAALVGVVAIGGLMMGGMALLGDLGDRLGPGYRDLFQGVAGMALLGFGPKLAGRRPAAVTSETAQRRAYLNNKFGRSGNLDHDINYRGNRETAAKFFKSKDIDPADAESYMNGLDFNHPVRVETLAPGKNLWQYQSPGAPQGNWYTLSPRVQPTELGINPMGTNRAANTIEPKVLNSYRTTQKVEVLRSTAAPTDDFWSVKGQSYPAKGGAQQLFSNEKGSFGLLPREGS Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0094 CDS 114611 115045 - hypothetical protein Class 4 NP_248784.1 15595292 Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] PF08786|DUF1795, Domain of unknown function (DUF1795)|8|137|2e-31 COG5435|COG5435, Uncharacterized conserved protein [Function unknown]. ; COG5435|COG5435, Uncharacterized conserved protein [Function unknown]. ; COG5435|COG5435, Uncharacterized conserved protein [Function unknown]. GTGACGCTCTATCGCCTCCACGAAGCCGATCTCGAGATTCCCGATGCCTGGCAGGACCAGAGCATCAACATCTTCAAGCTCCCCGCCAGCGGCCCCGCCCGCGAAGCCAGTTTCGTCATCAGCCGTGACGCCAGCCAGGGCGACGCGCCGTTCGCCGACTATGTCGCCCGCCAACTGGAAAACGCCGAGAAGCAATTGCCCGGCTTCAAGCTGCACAAGCGCTGGGACATCAACATCCACGGCCACGCCGCCGTGCTCCTCGACTACCAGTGGCAGCGCGAGGGCCGCGACCTGATGCTGCGCCAGGTATTCATCGAGCGCCGCCCGGCGGTGCTGATCACCACCCTGACCACCACCCCGGCTGACCTGCCGCACCACGAGCCGGCCTGGAAGCAGGCGATGCAGACCCTGGTCCCGCGCCCGACCCCTAGCTGA MTLYRLHEADLEIPDAWQDQSINIFKLPASGPAREASFVISRDASQGDAPFADYVARQLENAEKQLPGFKLHKRWDINIHGHAAVLLDYQWQREGRDLMLRQVFIERRPAVLITTLTTTPADLPHHEPAWKQAMQTLVPRPTPS Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0095 CDS 115299 117524 + conserved hypothetical protein Class 4 NP_248785.1 15595293 vgr PMID:98361897 ; PMID:9696756 N-tN-terminal ~500 amino acids 50% similar to VgrE and VgrG proteins [E. coli] Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown (This protein may have multiple localization sites)[Class 3] biological_process|GO:0033103|protein secretion by the type VI secretion system|IEA ; molecular_function|GO:0003674|molecular_function|IEA TIGR03361|VI_Rhs_Vgr|type VI secretion system Vgr family protein|subfamily_domain|0||No Data|No Data PF04524|DUF586, Protein of unknown function, DUF586|369|448|8e-41 COG3501|VgrG, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3501|VgrG, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG3501|VgrG, Uncharacterized protein conserved in bacteria [Function unknown]. ATGGCACTTGCGCAACAGACCCGCCTGGTCCGGGTCGACAGTCCGCTCGGCGCGGAGGTCCTGCAATTGCAGCGAATGGAGGGTCGCGAAGAGCTCGGCCGGCCGTTCGCCTACGAGCTGGAACTGATCTCGGAAAACCCCGACCTGCCACTCGACGGGCTGCTGGGCAAGCCGGCCAGCCTGGCGCTGGAACTGCACGACGGCAGCCGGCGGCATTTCCACGGCATCGTCGCCGCTTGCAGCCAGGGATCCGGCAACGGCCAGTTCGCCAGCTACCAGGTCACCCTGCGCCCCTGGCTGTGGCTGCTGACGCGCACCTCCGACTGCCGCATCTTCCAGAACCAGAAGGTCCCGGACATCATCAAGCAGGTGTTCCGCGACCTCGGCTTCTCCGACTTCGAGGACGCCCTGAGCCGCTCCTACCGCGAGTGGGAATACTGCGTGCAGTACCGCGAGACCAGTTTCGACTTCGTCAGCCGGCTGATGGAGCAGGAAGGCATCTACTACTGGTTCCGCCACGAGCAGAGCCGCCACATCCTGGTGCTCTCCGACGCCTACGGCGCGCACCAGAGCCCGCCGAACTACGCCAGCGTGCCCTACTACCCGCCGACCCTGGAACAGCGCGAGCGCGACCATTTCTACGACTGGCACATGGCGCGCGAGGTGCAGTCCGGCTCGCTGAGCCTCAACGACTACGACTTCCAGCGTCCCGGCGCGCGCCTGGAGGTGCGTTCGAACATCGCCCGCTCGCACGCGGCGGCCGACTACCCGCTGTACGACTACCCCGGCGAATACGTGCAGAGCCAGGACGGCGAGCAGTACGCGCGGACCCGTATCGAAGCCTTGCAGGCGCGCTACGAACGGGTGCGCCTGCGCGGCCGCGCCCGCGGCCTGGGTTCGGGCCACCTGTTCAAGCTCAGCGGCTACCCGCGCGAGGACCAGAACCGCGAGTACCTGGTGGTCGGCGCCGAGTACCGGGTGGTCCAGGAACTCTACGAGACCGGCGGCGGCGGGGTCGGCGCGCAGTTCGAGAGCGAGCTGGACTGCATCGATGCCGGCCAGGCCTACCGCCCCTTGCCGACCACTCCGCTGCCGATCGTCCGTGGCCCGCAGACTGCGGTGGTGGTCGGGCCCAAGGGCGAGGAGATCTGGACCGACCAGTACGGCCGGGTCAAGGTGCACTTCCACTGGGATCGCCACGACCAGTCGAACGAGAACAGCTCCTGCTGGATTCGCGTGTCCCAGGCCTGGGCCGGGAAGAACTGGGGTTCGATGCAGATCCCGCGGATCGGCCAGGAAGTGATCGTCAGCTTCCTCGAAGGCGACCCGGACCGGCCGATCATCACCGGGCGGGTCTACAACGCCGAGCAGACGGTGCCCTACGAGCTGCCGGCGAACGCCACCCAGAGCGGGATGAAGAGCCGTTCGAGCAAGGGCGGCACGCCGGCCAACTTCAACGAGATCCGCATGGAGGACAAGAAGGGCGCCGAGCAGTTGTTCATCCATGCCGAGAAGAACCAGGACATCGAGGTCGAGAACGACGAGACCCACTGGGTCGGCCACGACCGGACCAAGACCATCGACCACGACGAGACCGTGCACGTGAAGCACGATCGCACCGAGACCGTGGACAACAACGAGACCATAACCATCGGCGTCGACCGCACCGAGAAGGTCGGCAACAACGAGAAGATCAGTATCGGCGCGAACCGCACCGAGGACGTCGGCAGCAACGAGACCATCAGCATCGGCGTCGACCGCACCGAGAAGGTCGGCAGCAACGAGAAGATCAGCATCGGTGCCAATCGCACCGAGGACGTCGGCAACGACGAGACCATCAGCATCGGCGCGAACCGTAGCGAGTCGGTGGGCAACAACGAGACGATCAGCATCGGCGCCGACCGCAGCGAGTCGGTGGGCGCCAACGAGACCATCGACATAGGCGGCAACCAGAGCACCAGCATCGGCAAGAACGAGTCGCGCAGCGTCGGCCAGGGCCGCGATACCTCGGTGGGCAAGGACGATAGCCTGGACGTGGGCAAGAGCTTCACGCTCAACGCCGGCGACTCGATCACCCTGGTCACCGGTGCCGCCAGCATCCGCATGAAGAAGGACGGCAGCATCGTCATCAGCGGCAAGAACATCACCATCGACGGATCCGGGGCGATCAACGTCAAGGCCGACAAGAACGTGGTGGTGAAGGGACGCAAGATCCTCCAGAACTGA MALAQQTRLVRVDSPLGAEVLQLQRMEGREELGRPFAYELELISENPDLPLDGLLGKPASLALELHDGSRRHFHGIVAACSQGSGNGQFASYQVTLRPWLWLLTRTSDCRIFQNQKVPDIIKQVFRDLGFSDFEDALSRSYREWEYCVQYRETSFDFVSRLMEQEGIYYWFRHEQSRHILVLSDAYGAHQSPPNYASVPYYPPTLEQRERDHFYDWHMAREVQSGSLSLNDYDFQRPGARLEVRSNIARSHAAADYPLYDYPGEYVQSQDGEQYARTRIEALQARYERVRLRGRARGLGSGHLFKLSGYPREDQNREYLVVGAEYRVVQELYETGGGGVGAQFESELDCIDAGQAYRPLPTTPLPIVRGPQTAVVVGPKGEEIWTDQYGRVKVHFHWDRHDQSNENSSCWIRVSQAWAGKNWGSMQIPRIGQEVIVSFLEGDPDRPIITGRVYNAEQTVPYELPANATQSGMKSRSSKGGTPANFNEIRMEDKKGAEQLFIHAEKNQDIEVENDETHWVGHDRTKTIDHDETVHVKHDRTETVDNNETITIGVDRTEKVGNNEKISIGANRTEDVGSNETISIGVDRTEKVGSNEKISIGANRTEDVGNDETISIGANRSESVGNNETISIGADRSESVGANETIDIGGNQSTSIGKNESRSVGQGRDTSVGKDDSLDVGKSFTLNAGDSITLVTGAASIRMKKDGSIVISGKNITIDGSGAINVKADKNVVVKGRKILQN Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0096 CDS 117552 118001 + hypothetical protein Class 4 NP_248786.1 15595294 Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Unknown[Class 3] ATGAGTGTCGAGATCCATCTACCCGGGGCCACGACGGCCCTTCCCGCGCGCCTGGACGGCGTGGTCATCGGCGTCCTCCTCGACGTGCCGGACGCCGCCGCTCCGGTGGTCGCCTATCCCGGTTGCCCGAGCGAGCACGGCCTGGCGGCGGCCACCACCACCCAGCTCAGTCGCGCCGACATCGGCGCCCAGGTAGCGCTGATGTTCGTCGCCGGCGATCCGCGCCAGCCGCTGCTGATCGGCCGCATCCAGCGCCTGCCGCAGGAAGCGCTGGCGCAACTGGACGGCGAGCGCCTGGAGTTCAGTGCCGAACGCGAGATCGTCCTGCGTTGTGGCAAGGCCAGCATCACCCTGACCCGCGCCGGCAAGGTGATCATCCGTGGCGCCTATCTTTCCAGCCGCTCCACCGGGGTCAACCGGATCAAGGGCGGTTCGGTGCAGATCAACTGA MSVEIHLPGATTALPARLDGVVIGVLLDVPDAAAPVVAYPGCPSEHGLAAATTTQLSRADIGAQVALMFVAGDPRQPLLIGRIQRLPQEALAQLDGERLEFSAEREIVLRCGKASITLTRAGKVIIRGAYLSSRSTGVNRIKGGSVQIN Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0097 CDS 117931 119130 + hypothetical protein Class 4 NP_248787.1 15595295 Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] PF09937|DUF2169, Uncharacterized protein conserved in bacteria (DUF2169)|47|347|1e-101 COG5351|COG5351, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG5351|COG5351, Uncharacterized protein conserved in bacteria [Function unknown]. ; COG5351|COG5351, Uncharacterized protein conserved in bacteria [Function unknown]. GTGGCGCCTATCTTTCCAGCCGCTCCACCGGGGTCAACCGGATCAAGGGCGGTTCGGTGCAGATCAACTGAGCGCGGCGGGCCCGACATGGAACTGTTGAACGCCACCCCGCTGGCCGCCGCCTACAACCAGGGGCTCGACGCCGAAGGCCGGGAGTCGCTGGTGGTGATCGCCAAGGGCAGTTTCGACCTGCCGCTGGACGGTCGCGAGGCGCGCCTGCTGGACGAGCAGCAGACGCTGCTGATGGTCGATGAATTCTATGGCGAGCCGGGGTTTTCCGCGCCGCGCCGGGAGTGCGAGTTCGTTCCCTTCAAGCCGTTCTGCGATGTGCTGGTGCTGGGCAGCGCCCAGGCGCCCGGCGGGCGGCCGGTACAGCAGTTGACCGCGGGCATCCGCGTCGGCCGGGTGAGCAAGGCGCTGACGGTGCATGGGCCGCGCCAGTGGGAACCGGGATTGCTCGGTGCCGGCGCGGGCGTCGCGCAGCCGTTCCAGAGCCAGGACATTTCCTACGCCAGTGCCTTCGGCGGCAGCCATGCCTCGCCGGACAACCCCGGTTTCATGGATTGCTACATGGCCAATCCGGCCGGATGTGGCTGGTTTCCGCGCAGCGCCGACACCGCCGAGATCGTCGGCACGCCGATGCCGGCCACGGAAAAGCTCGGCGAGCCGGTGGACAGCCCCCACGGCCGCTTCACGCCGATGGCGCTCGGCCCGCTCGGCCGCCACTGGCAGGCCCGGGTCGGCTTCGCCGGCCGCTACGACGACGCCTGGCTGGCCGAGCGCTTCCCGTTCCTGCCCGCCGACTTCGACGAGCGCTACTTCCAGTCCGCGCCGGCCGACCAGTGGACCGACCATCTGCGCGGCGGCGAGGAGGTCCTGCTGCTCAACCTCACCGGCGAGGAGCGCGCGGCCTTCCGCGTGCCGCGCAGGGAGGTCCCGGTGACCTTCTTCCTGAAAAAGGGTGGCCACGAAACCGCGCAGGCACGGATCGATACCCTGCTGGTGGACTGCGACGCCCGTCGCGTGGAAGTCACCTGGCGCATTCGCCGGCCGTTGAAGCGCAACCTGTTCGAGATCGCCCAGGTGCTGGTCGGCAGCAAGTCCGCCGCCTGGTGGCGCGCCCGCGAGCTGGGCAAGGACTACTACCCCTCGCTTGCCGCGTTGGCACGCAGCCGCCAGGCCGAGGAGGACGAGGCATGA MAPIFPAAPPGSTGSRAVRCRSTERGGPDMELLNATPLAAAYNQGLDAEGRESLVVIAKGSFDLPLDGREARLLDEQQTLLMVDEFYGEPGFSAPRRECEFVPFKPFCDVLVLGSAQAPGGRPVQQLTAGIRVGRVSKALTVHGPRQWEPGLLGAGAGVAQPFQSQDISYASAFGGSHASPDNPGFMDCYMANPAGCGWFPRSADTAEIVGTPMPATEKLGEPVDSPHGRFTPMALGPLGRHWQARVGFAGRYDDAWLAERFPFLPADFDERYFQSAPADQWTDHLRGGEEVLLLNLTGEERAAFRVPRREVPVTFFLKKGGHETAQARIDTLLVDCDARRVEVTWRIRRPLKRNLFEIAQVLVGSKSAAWWRARELGKDYYPSLAALARSRQAEEDEA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0098 CDS 119127 120164 + hypothetical protein Class 4 NP_248788.1 15595296 PMID:15687295 type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 25) ; type I export signal computationally predicted by Phobius (cleavage after residue 24) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 25) Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] COG0304|FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]. ; COG0304|FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]. ; COG0304|FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]. ATGAGCCAGGCCCTGAGCATCGTCGCCTCCGGCATGGTCAGCGCGGTCGGTCTCAGCGCGCCGGCCAGCTGCGCGGCGATCCGCTGCGCCCTGGACAACTTCCAGGAAACCCGTTTCATCGACCAGGGCGGCGAATGGTTGCTTGCCGCCAGCGTGCCGCTGGAGCAGCCCTGGCGCGGCCGCGCCAAGCTGCTGAAGATGGCTGCGCGAGCCATCGACGAGGCCTTGCGCGGCCAGCCCGATCTCGATTGCACGGAGCTGCCGCTGCTGCTCTGCGTCGCCGAGGGCGACCGTCCCGGACGCTGCGCGGGGCTCGACGAGTCTTTCCTGCGTGACCTGGAAGGCGAGCTGGGACGACGCTTCCATCCCTCCTCGGCACTCATCGCCCGTGGCCGGGTCGGTGGCGCGGTGGCCCTGCTCAACGCGCGCAAGCTGATCCAGGGCGGCTGCCGGCAGGTCCTGGTGGCCGGCGTCGACTCCTTCGTCAGCGGCCCGACCCTGGCCGCCTACGAGGCCCGCGAGCGGCTGCTGACCAGCCAGAACTCCAACGGCTTCATTCCCGGCGAGGGCGCCGCCGCCGTGCTGGTCGCCGCGCCGCTCCACGAGGAGGCGCCGCAGTTGCTCTGCATCGGCCTCGGCTTCGGCGTCGAGAAGGCCACGGTGGAGAGCGAGGACCTGCCGCTGCGCGCCGACGGCCTGAGCCAGGCCGTGCGCGCCGCCCTCGCCGAGGCTGGCTGCGGCCTGGAGCAGATGGACTACCGGCTCACCGACATTTCCGGCGAGCAGTACTACTTCAAGGAGGCCTCGCTGACCCTGAGTCGCAACCTGCGCGTGCTCAAGCCGAAGTTCGACCTCTGGCACCCCGCCGACTGCATCGGCGAATGCGGCGCCGCCATCGGTCCGGCGTTGCTCGCCGTGGCCCTGGCCGCTTCGCGCAAGGGCTACGGCGACGGGCCGAACGTGTTCTGCCACCTGGGCAACGATGCCGGCGAACGCGCCGCCGCGCTGCTCAGCTATCGACGGGTGAGGGCTGCCTGA MSQALSIVASGMVSAVGLSAPASCAAIRCALDNFQETRFIDQGGEWLLAASVPLEQPWRGRAKLLKMAARAIDEALRGQPDLDCTELPLLLCVAEGDRPGRCAGLDESFLRDLEGELGRRFHPSSALIARGRVGGAVALLNARKLIQGGCRQVLVAGVDSFVSGPTLAAYEARERLLTSQNSNGFIPGEGAAAVLVAAPLHEEAPQLLCIGLGFGVEKATVESEDLPLRADGLSQAVRAALAEAGCGLEQMDYRLTDISGEQYYFKEASLTLSRNLRVLKPKFDLWHPADCIGECGAAIGPALLAVALAASRKGYGDGPNVFCHLGNDAGERAAALLSYRRVRAA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0099 CDS 120164 121324 + hypothetical protein Class 4 NP_248789.1 15595297 Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] ATGGCCAACGAGGTGTACGCCAACAACATGGAGATCTCCTGCAAGGCGGCGAACGGCAAGTCCATCGCGGCCTTCCCGGATGTCTGCTTCACCCCGCCGCAGGCGCCGCCGACGCCGTTGGGGGTACCGATCCCCTACCCCAATACCGGCCTGTCCAAGGACACCACCAAAGGCACCCGGACCATTCGCATCACCCGCAAGGAGGTGATGCTGAAGAACAAGAGCTACTACAAGACCAGCTACGGCGACGAGCCGGGGCGGGCGCCGAAGAAGGGCATCGTCACCAGCAAGATCAAGGGCAAGGTGTACTTCACCTCCTGGTCGATGAACGTCAAGTTCGAAAGCAAGAACGTGGTTCGCCACCTCGACCTGACCACCCACAACCACGCGTCCTTTCCTGGCAATACGCCGGTCTGGCCCTACCTCGACCAGGCCACCGTCGATGCTGGTGGTGGACCGTGCAGCAATGAAGTGAAGAAGGAGAAGAAGGATTGCGCTGACTTCAAGCCGCATGGCAGCAAGGATGCCTGCGCTGGCCTTGGCGCGGGCAAGCCTTCCGGCAAGAAGACCAGCAACGAAGCTGACCGACTGGCAGACAAGGTCGCTGCCCGAAAATGCCTGACCGCGCGCCGGTGTGCCCTGCAACCGTACAAGCCGAACAGTTGCTGCCCGCAGCAGACCGCTCACCACCTGATCGAGGCCAGCGCCTTGCACGACAAGGGACGTGGTGGAAAAGGCTCGGTACCCCTCAAGGGGATATCCAACTATTCGGAGAACAAGGCTCCTTGCGTCTGCGCGGAGGGCGTCAATCAGAACGTGGGTACCCACGGCCTCATGCACACGTTCCAGAGCGCCGCTGCCGCGAAGTCGCGCAGTGGAACCCTGCAATTGTCCAATGGCAGCTCCATCTCCGCGAAGAAGACCACCTACGGAACGGCGAAACGTCAATCCATGGCTGCCATGGGCAAGGTCTTTCCGCAGTCGAAATGCTCGAAGGAATGTCTGTCCGCTCAGCTCGACAACTATCACAAGCAGTGCGGAATCAACGCCAGAACACCCATCAAGGCCGTTGAAACCGGCCAGACCGACGTCACGGCTGCGACGCAGGCGATAAAGACCCGCAATGCGCGTCTTGGCGCCACGAGGAGTCGAGTCCGCTAG MANEVYANNMEISCKAANGKSIAAFPDVCFTPPQAPPTPLGVPIPYPNTGLSKDTTKGTRTIRITRKEVMLKNKSYYKTSYGDEPGRAPKKGIVTSKIKGKVYFTSWSMNVKFESKNVVRHLDLTTHNHASFPGNTPVWPYLDQATVDAGGGPCSNEVKKEKKDCADFKPHGSKDACAGLGAGKPSGKKTSNEADRLADKVAARKCLTARRCALQPYKPNSCCPQQTAHHLIEASALHDKGRGGKGSVPLKGISNYSENKAPCVCAEGVNQNVGTHGLMHTFQSAAAAKSRSGTLQLSNGSSISAKKTTYGTAKRQSMAAMGKVFPQSKCSKECLSAQLDNYHKQCGINARTPIKAVETGQTDVTAATQAIKTRNARLGATRSRVR Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0100 CDS 121346 122266 + hypothetical protein Class 4 NP_248790.1 15595298 Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] ATGTTGAAGAAACTCTCGCCGATTTTCTCGAACATCACCGGCGTCGTCCGCTATCAGGACCTGGCGTACGTGGCCTCGGTATCCGACGAGATCCAGGAGCAGAACATAGCGCACAGCTATGTCACGGAGTGGGACTGCGGAACCTGGTGTGTTGCTGGCGAGGATGACGACATGCTGCCCTGGGAGATCGTGTCGGCCACGGTAGTGCACGAGCCGGTGGAACAAGCATTGTTTCTGGGCGCTCGGGGCCAGGTATTCTGCATGGGCTCCGGCGACATCCATGAAGAGCAGTTGCCCGACGGCGACGATGCCATCGGTGGCCGGGGCAATATGCGCGGCGTTGCCTGTATCGACGGGGTGGCCTATGCCTGCGGGATGGATCGACAGGTCTACCGGCGCTTCGACGAGAACGACTGGCGTGCCATCGACACCGGCGCTCGGCCTCCGGCAGGCAGCGAAGCGGTGGTCGGATTCGAGGCCATCGGCGGCTTCGGTGCCAGGGAAATCTATGCCGTCGGCTGGGACGGGGAGATCTGGCAGTACGACGGCAAGCGCTGGCAGCCCCGGGAGAGCCCGACGAACTTGATCCTGACGGCGATCTGCTGCGCGGAAGATGGCTCGGTTTACGCCTGTGGACAGGCGGGAACGCTGCTGCGTGGACGCAACGACCACTGGGAGATCATCGCCCAGGACGATGTCGATGAAGACTTGTGGAGCCTCGCGTGGTTCGACGGCGCACTCTACGTGTCGAGCGCAACGGCGGTCTATACGCTGGTCGGTGGCCATCTCAAGGAGGTGGACTTCGGTGATGAGCAACCCCAACGCTGCTTCCACCTTAGCGCTGCCGACGGCGTGTTGTGGAGCATCGCCGCGAAAGACATCTTCAGCTTCGACGGCCAGCAATGGACGCGCATAGATTGA MLKKLSPIFSNITGVVRYQDLAYVASVSDEIQEQNIAHSYVTEWDCGTWCVAGEDDDMLPWEIVSATVVHEPVEQALFLGARGQVFCMGSGDIHEEQLPDGDDAIGGRGNMRGVACIDGVAYACGMDRQVYRRFDENDWRAIDTGARPPAGSEAVVGFEAIGGFGAREIYAVGWDGEIWQYDGKRWQPRESPTNLILTAICCAEDGSVYACGQAGTLLRGRNDHWEIIAQDDVDEDLWSLAWFDGALYVSSATAVYTLVGGHLKEVDFGDEQPQRCFHLSAADGVLWSIAAKDIFSFDGQQWTRID Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0101 CDS 122248 123495 + hypothetical protein Class 4 NP_248791.1 15595299 Hypothetical, unclassified, unknown Unknown[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0008150|biological_process|IEA ; molecular_function|GO:0003674|molecular_function|IEA TIGR02270|TIGR02270|conserved hypothetical protein|subfamily|5.8e-266||Hypothetical proteins|Conserved ATGGACGCGCATAGATTGAGCATCGCAGCGATCGTCGACCAGCACGCCGAGGAAGCCGCCTTCCTTGCCCTGCTCCGCGACTACGCCGTGCGTGCGCCCCATTACGACCTGGAGGAGCTCGCCGAGCTCGATCAGCGCATCGAGGCGCACCTGGACGGCTTGGCGATCGCCGGCCAGGCCGGCCATGACGCCCTGCTCGAGCAACTCGACGCGCACGCCCAGGGCGAGGCGTTCGCCCTCGCGGTGCTGGCCATGCAGGCAGGAGACGATGCGTTGATCGGACGGATGCGCGCCTGTCTTGCGGCGTCTCCGGAAGCCCGGCGCGGTTTCGCCGCAGCCCTCGGCTGGCTCGACTGGGACCAGGCGCGGCCCTGGGTGGAGCGCCTGCTGGCCTCGCCCGAGCCGCTGTTCCGCGCCATTGGCCTGGCCGCCTGCGGCATGCACCGGCATGACCCGGGGCCGGCGCTGCTGTCCGCCCTTGGCCACGCCGACCCGGCGGTGCTGGCGCGCGCCGCGCGCACCGCCGGCGAGCTGCGTCGGCGCGACCTGATGGCGAATATTCGCGCCTATCGCGCCCACGATGACCCGAGCCTGCGCTTCTGGGCCAACTGGGCCACCGCGCAGATGGGCGACGAGGAGGCGTTGGGGCCATTGCGTGCGTTCGCCGGGCAGCCCGGCCCGTTCCAGCTGCCGGCGACCATGGTGCTGCTCGCCTGGCAGCCGCGCGACACCAGCATGGCCTGGATTCGCCAACTGATGCAGGCGGCGGACACGCGGCGGATCGGCATCCAGGCCACCGGCCTGTTCGGCGATCCGGTGGCGGTGCCCTGGCTGATCCAGCAGATGCGCGACGAGAGTCTGGCGCGGGTCGCCGGCGAGGCCTTCAGCCTGATCACCGGCGCCGACCTGGCGCTGCTCGACCTGGAGCTGGAGGCCTTGCCCGACTACGACCCTGGCCCCAACGACGATCTCGACGACGACAACGTCGCCCTCGACGACGACGAGAACCTTAGCTGGCCGGAGGCGGAGCGAGTCTCCGCCTGGTGGCGTGACAACGGCGCGCGTTTCGTCGCCGGGCGCGCCTACCTGCTCGGCGAACCGCTGGGCGAGGCGCGCTGCCGCCAGGTCCTGCGCGACGGCCAGCAACGCCAGCGGATGGCTGCGGCGTGCCTGCTGGCGCGCTTCGTGCCGAACCTGCCGCTGTTCCCCACCGGTGCGCCGGTGCGCCGCCAACTGGACCTGTTCTGA MDAHRLSIAAIVDQHAEEAAFLALLRDYAVRAPHYDLEELAELDQRIEAHLDGLAIAGQAGHDALLEQLDAHAQGEAFALAVLAMQAGDDALIGRMRACLAASPEARRGFAAALGWLDWDQARPWVERLLASPEPLFRAIGLAACGMHRHDPGPALLSALGHADPAVLARAARTAGELRRRDLMANIRAYRAHDDPSLRFWANWATAQMGDEEALGPLRAFAGQPGPFQLPATMVLLAWQPRDTSMAWIRQLMQAADTRRIGIQATGLFGDPVAVPWLIQQMRDESLARVAGEAFSLITGADLALLDLELEALPDYDPGPNDDLDDDNVALDDDENLSWPEAERVSAWWRDNGARFVAGRAYLLGEPLGEARCRQVLRDGQQRQRMAAACLLARFVPNLPLFPTGAPVRRQLDLF Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0102 CDS 123871 124599 + probable carbonic anhydrase Class 3 NP_248792.1 15595300 68% similar to carbonic anhydrase CynT [Escherichia coli] PS00704: Prokaryotic-type carbonic anhydrases signature 1 cyanate degradation [PseudoCyc] Central intermediary metabolism Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] PF00484|Pro_CA, Carbonic anhydrase|48|215|3e-50 COG0288|CynT, Carbonic anhydrase [Inorganic ion transport and metabolism]. ; COG0288|CynT, Carbonic anhydrase [Inorganic ion transport and metabolism]. ; COG0288|CynT, Carbonic anhydrase [Inorganic ion transport and metabolism]. ATGCCAGACCGTATGCGGGGCGTTAAGTCCGATTCTCCAGAGCAGGAAAGCGCTGACGATGCATTGAAAAGGATTGTCGATGGATTCCAGCATTTCCGCCGGGAGGTCTTTCCCGAGCAGCAGGCGCTGTTCAAGAAGCTCGCCAATAGCCAGCGGCCGCGGGCGATGTTCATCACCTGCGCGGATTCGCGCATCGTTCCCGAGCTGATCACCCAGAGTTCCCCCGGCGACCTGTTCGTCACCCGCAACGTCGGCAACGTGGTGCCGCCCTACGGGCAGATGAACGGTGGCGTCTCCACCGCCATCGAATACGCTGTGCTGGCGCTGGGCGTGCACCACATCATCGTCTGCGGCCACTCCGACTGCGGGGCGATGCGCGCCGTGCTCGACCCGCAGACCCTGGAACGCATGCCGACGGTCAAGGCCTGGCTGCGGCACGCCGAGGTGGCACGCACGGTGGTGGCGGACAACTGCGACTGCGGCGCCAGCCACGACACCCTCGGGGTGCTCACCGAAGAGAACGTGGTGGCCCAGCTCGATCACCTGCGCACCCACCCCTCGGTGGCCTCGCGCCTGGCCAGCGGGCAACTGTTCATCCACGGCTGGGTGTACGACATCGAGAGTGCGCAGATCCGCGCCTACGACGCCAAGCAGGGTCGCTTCCTGCCCCTCGACGGCGAGCATCCGGTGCCGATGGCCACGCCCGCGCCGCGCTACCTGAGCTCGTGA MPDRMRGVKSDSPEQESADDALKRIVDGFQHFRREVFPEQQALFKKLANSQRPRAMFITCADSRIVPELITQSSPGDLFVTRNVGNVVPPYGQMNGGVSTAIEYAVLALGVHHIIVCGHSDCGAMRAVLDPQTLERMPTVKAWLRHAEVARTVVADNCDCGASHDTLGVLTEENVVAQLDHLRTHPSVASRLASGQLFIHGWVYDIESAQIRAYDAKQGRFLPLDGEHPVPMATPAPRYLSS Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0103 CDS 124810 126381 + probable sulfate transporter Class 3 NP_248793.1 15595301 PMID:15687295 59% similar to hypothetical protein Rv3273 [Mycobacterium tuberculosis] PS01130: Sulfate transporters signature ; 12 predicted transmembrane helices ; 9 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Membrane proteins ; Transport of small molecules Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0008272|sulfate transport|IEA ; cellular_component|GO:0016020|membrane|IEA ; molecular_function|GO:0015116|sulfate transmembrane transporter activity|IEA TIGR00815|sulP|sulfate permease|subfamily|3.4e-44||Transport and binding proteins|Anions PF00916|Sulfate_transp, Sulfate transporter family|104|413|3e-39 COG0659|SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]. ; COG0659|SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]. ; COG0659|SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]. ATGCATGTTTCAAAGGTGTTTCCGTCCCTCCGGGACACGTTGCCGCGGGACCTGATGGCCTCCGTGGTGGTGTTCCTCGTCGCCCTGCCGCTGTGCATGGGCATCGCCATCGCCTCCGGGATGCCGCCGGCCAAGGGCCTGCTCACCGGCATCGTCGGTGGCCTGGTGGTCGGCTTCCTGGCCGGCTCGCCGCTACAGGTCAGCGGCCCGGCGGCCGGCCTCGCGGTGCTGGTCTTCGAACTGGTGCGTACCTACGGGGTGGCCATGCTCGGGCCGATCCTGCTGCTCGCCGGCGCCATCCAGCTGCTCGCCGGGCGGCTGCGCCTGGGCTGCTGGTTCCGGGTCACCTCGCCGGCGGTGGTATACGGGATGCTCGCCGGCATCGGCATCCTCATCGTCCTTTCGCAATTGCACGTGATGCTCGACCTGGCGCCCAAGGCGTCCGGCCTCGACAACCTGCTGGCATTCCCCCAGGCGGCGTTCGCCGCGCTCGGTTCGCTGGGCATGGACAGCGGCCTCGACGCGGCGCTGCTCGGGCTGGGCACCATCGCGGTGATGTGGGGCTGGGACAAGCTGCGTCCGCAACGCCTGCGCTTCCTACCCGGTGCGCTGCTCGGCGTGAGCCTGGCGACCCTGGCCAGCCTCTGGCTGGCGCTGGACGTGCGGCGGGTCGAGGTACCGGCCAACCTCGGCGAGGCCATCGTCTGGCTACGCCCGGCCGACCTGCTGGCCCTGGCCGATCCCTCCCTGCTGCTGGCGGCGGTGGTGGTGGCCTTCATCGCCAGTGCGGAGACCCTGCTCTCGGCGGCGGCGGTGGATCGCCTGCACGACGGCCCGCGCTCGGACATGGATCGCGAGTTGTCCGCCCAGGGTGTCGGCAACATGCTCTGCGGCCTGCTCGGCGCGCTGCCGATGACCGGGGTGATCGTACGCAGCTCGGCCAACGTCAATGCCGGTGCGCGAACCCGCGCCTCGGCGATCTTCCACGGCCTCTGGTTGCTCGCCTTCGTCCTCCTGCTCGGCAGCCTGCTGCGGCAGATTCCGGTGGCGAGCCTGGCCGGGGTGCTGGTCTATACCGGGGTCAAGCTGGTCGATTTCAAGGCCCTCGGCAACCTCTCTCGCTACGGCCGGATGCCGATGCTGGTGTACGCGGCCACCGCCCTGGCCATCGTCTTCACCGACCTGCTGACCGGCGTGCTGGTGGGCTTCGCCCTGACCCTGCTGAAGCTGGTGCTGAAGGCGGCGCGGCTGAAGATCGCCCTGCGCTACACCGGCGAGCATGAAGCCGAGCTGCGCCTGAGCGGCGCCGCGACTTTCCTCAAGGTGCCGGCGCTGTCGCGGGTGCTCGACGAGGTCAAGCCGGGGACCACCCTGCACGTACCGATGGATAACCTCAGCTATGTCGACCATGCCTGCATGGAGCTGCTCGAGGATTGGGGGCGGATGGCACCGGTGCAGGGCTCGCGCCTGGTGATCGAACCGCGCGCCTTGAAGCGTCGCCTGGAAGGGCGCCTGCGCGGCAGCGTCGGGTTGGGCGGCGCGCGCAATGGCGGGGCGGTCAGCCCAGGCTGA MHVSKVFPSLRDTLPRDLMASVVVFLVALPLCMGIAIASGMPPAKGLLTGIVGGLVVGFLAGSPLQVSGPAAGLAVLVFELVRTYGVAMLGPILLLAGAIQLLAGRLRLGCWFRVTSPAVVYGMLAGIGILIVLSQLHVMLDLAPKASGLDNLLAFPQAAFAALGSLGMDSGLDAALLGLGTIAVMWGWDKLRPQRLRFLPGALLGVSLATLASLWLALDVRRVEVPANLGEAIVWLRPADLLALADPSLLLAAVVVAFIASAETLLSAAAVDRLHDGPRSDMDRELSAQGVGNMLCGLLGALPMTGVIVRSSANVNAGARTRASAIFHGLWLLAFVLLLGSLLRQIPVASLAGVLVYTGVKLVDFKALGNLSRYGRMPMLVYAATALAIVFTDLLTGVLVGFALTLLKLVLKAARLKIALRYTGEHEAELRLSGAATFLKVPALSRVLDEVKPGTTLHVPMDNLSYVDHACMELLEDWGRMAPVQGSRLVIEPRALKRRLEGRLRGSVGLGGARNGGAVSPG Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0104 CDS 126518 127114 + hypothetical protein Class 4 NP_248794.1 15595302 Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] ATGGTGGACGGCTTCGTCCAGCCGGTTGGCGAAGGGCTCGCCGATCAACTGGTGGGCCACCAGGTTGGCTACGGTGGTGTCCAGTGGGATCAGTGCCTGGCCGAAGTGGGCGATGTAGCGGTCGTTCACTTCTTCCACCAGGCGGTGCGCCAGGTAGGCTTCGTCGAGCAGGGCGTCGAGGCCGTCGTGGCCGGCGAGCAACGCCGGCGGGGTGAGGAAGAACTGCTCGGCGACCTTCAGCACCGGCTTGATCCGTTCCTCGATGCCGGCTTCGCGGGCCACGCTGTTGGCGGCGTCGAGCAGGTCCGGTACCTGTTCGACGTAGGCGTGGACGAAGCGGGTGAGTATGTCTTCCGTGTTCTCGCCTTGCGGCTGGATGGTGCGATGCAGGTGGGGCAGGCGGCTGGCTATCAGATCAGCCAGGTGACCGTGGCGGGCTTCGCTGAGGTGCGCCTGCTGGATGAGTTCACGGAGGGCAGCGGTGTTCATGGGGTCTCCCATACAACGGGGATGGTGAAGAAGAGGAGAAACATAGCCGGCGGCGCGCGCCGGCTAAGACGCGATTGTCATAATCGCTTCGTGGTTATGCGAGGATGA MVDGFVQPVGEGLADQLVGHQVGYGGVQWDQCLAEVGDVAVVHFFHQAVRQVGFVEQGVEAVVAGEQRRRGEEELLGDLQHRLDPFLDAGFAGHAVGGVEQVRYLFDVGVDEAGEYVFRVLALRLDGAMQVGQAAGYQISQVTVAGFAEVRLLDEFTEGSGVHGVSHTTGMVKKRRNIAGGARRLRRDCHNRFVVMRG Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0105 CDS 127378 128502 + coxB cytochrome c oxidase, subunit II Class 2 NP_248795.1 15595303 coII PMID:95379947 ; PMID:98021406 ; PMID:15687295 ; PMID:7651515 ; PMID:9380672 56% similar to cytochrome c oxidase II [Paracoccus denitrificans] 3 predicted transmembrane helices ; PS00190: Cytochrome c family heme-binding site signature ; PS00078: Cytochrome c oxidase, subunit II {CO II) and nitrous oxide reductase dinuclear copper centers signature ; type I export signal computationally predicted by Phobius (cleavage after residue 22) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 22) Energy metabolism Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0006091|generation of precursor metabolites and energy|ISS ; biological_process|GO:0055114|oxidation reduction|IEA ; molecular_function|GO:0004129|cytochrome-c oxidase activity|IEA TIGR02866|CoxB|cytochrome c oxidase, subunit II|equivalog|2.6e-66|1.9.3.1|Energy metabolism|Electron transport PF02790|COX2_TM, Cytochrome C oxidase subunit II, transmembrane domain|24|103|1e-06 COG1622|CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion]. ; COG1622|CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion]. ; COG1622|CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion]. ATGCTGCGACATCCACGAGTCTGGATGGGCTTCCTTTTGCTCTCGGCGATCAGCCAGGCGAATGCCGCCTGGACGGTCAACATGGCCCCGGGCGCTACCGAGGTGAGCCGGTCCGTCTTCGACCTGCACATGACCATCTTCTGGATCTGCGTGGTGATCGGCGTGCTGGTCTTCGGCGCGATGTTCTGGTCGATGATCGTCCACCGCCGCTCCACCGGCCAGCAGCCGGCGCACTTCCACGAGAGCACCACGGTGGAAATCCTCTGGACGGTGGTGCCGTTCGTGATCCTGGTGGTGATGGCGGTGCCCGCCACCCGCACCCTGATCCACATCTACGACACTTCCGAGCCGGAGCTGGACGTGCAGGTCACCGGCTACCAGTGGAAGTGGCAGTACAAGTACCTGGGCCAGGACGTCGAGTACTTCAGCAACCTGGCCACCCCGCAGGATCAGATCCACAACCGGCAGGCGAAGGACGAGCATTACCTGCTGGAGGTGGACGAGCCGCTGGTGCTGCCGGTGGGCACCAAGGTGCGCTTCCTGATCACCTCCAGCGACGTGATCCATTCCTGGTGGGTGCCGGCCTTCGCGGTCAAGCGCGACGCCATCCCCGGCTTCGTCAACGAGGCCTGGACCAAGGTCGACGAGCCCGGCATCTATCGCGGCCAGTGCGCCGAGCTGTGCGGCAAGGACCACGGCTTCATGCCGATCGTGGTCGACGTCAAGCCCAAGGCCGAGTTCGACCAGTGGCTGGCCAAGCGCAAGGAAGAGGCGGCGAAGGTCAAGGAACTGACCAGCAAGGAGTGGACCAAGGAAGAGTTGGTTGCGCGCGGCGACAAGGTCTACCACACCATCTGCGCCGCCTGCCACCAGGCCGAAGGCCAGGGCATGCCGCCGATGTTCCCGGCGCTGAAGGGTTCGAAGATCGTCACCGGGCCCAAGGAGCACCACCTGGAAGTGGTCTTCAACGGCGTGCCCGGCACCGCCATGGCGGCCTTCGGCAAGCAGCTCAACGAGGTCGACCTGGCCGCGGTGATCACCTACGAGCGCAACGCCTGGGGCAACGACGATGGCGACATGGTCACCCCGAAAGACGTCGTCGCCTACAAGCAGAAACAACAATAG MLRHPRVWMGFLLLSAISQANAAWTVNMAPGATEVSRSVFDLHMTIFWICVVIGVLVFGAMFWSMIVHRRSTGQQPAHFHESTTVEILWTVVPFVILVVMAVPATRTLIHIYDTSEPELDVQVTGYQWKWQYKYLGQDVEYFSNLATPQDQIHNRQAKDEHYLLEVDEPLVLPVGTKVRFLITSSDVIHSWWVPAFAVKRDAIPGFVNEAWTKVDEPGIYRGQCAELCGKDHGFMPIVVDVKPKAEFDQWLAKRKEEAAKVKELTSKEWTKEELVARGDKVYHTICAACHQAEGQGMPPMFPALKGSKIVTGPKEHHLEVVFNGVPGTAMAAFGKQLNEVDLAAVITYERNAWGNDDGDMVTPKDVVAYKQKQQ Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0106 CDS 128512 130104 + coxA cytochrome c oxidase, subunit I Class 2 NP_248796.1 15595304 coI PMID:94161496 ; PMID:15687295 ; PMID:8117073 71% similar to cytochrome-c oxidase, subunit I [Bradyrhizobium japonicum] 12 predicted transmembrane helices ; PS00077: Heme-copper oxidase catalytic subunit, copper B binding region signature ; 12 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Energy metabolism Cytoplasmic Membrane[Class 2] ; Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0006091|generation of precursor metabolites and energy|ISS ; biological_process|GO:0055114|oxidation reduction|IEA ; molecular_function|GO:0004129|cytochrome-c oxidase activity|IEA TIGR02891|CtaD_CoxA|cytochrome c oxidase, subunit I|equivalog|0|1.9.3.1|Energy metabolism|Electron transport PF00115|COX1, Cytochrome C and Quinol oxidase polypeptide I|25|477|1e-151 COG0843|CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 [Energy production and conversion]. ; COG0843|CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 [Energy production and conversion]. ; COG0843|CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 [Energy production and conversion]. ATGAGTGCTGTGATCGATACGCCCGACCACCATGCCGGCGACCACCACCACGGACCGGCCAAGGGCCTGATGCGCTGGGTGCTGACGACCAACCACAAGGACATCGGCACCCTCTACCTGTGGTTCAGCTTCATGATGTTCCTGCTCGGCGGCTCGATGGCCATGGTGATCCGCGCCGAGCTGTTCCAGCCCGGCCTGCAGATCGTCGAGCCGGCGTTCTTCAACCAGATGACCACCATGCACGGCCTGATCATGGTCTTCGGCGCGGTGATGCCGGCCTTCGTCGGCCTGGCCAACTGGATGATCCCGCTGATGATCGGCGCGCCGGACATGGCCCTGCCGCGGATGAACAACTTCAGCTTCTGGCTGCTGCCGGCGGCCTTCGGCCTGCTGGTCAGCACCTTGTTCATGCCCGGCGGCGGCCCCAACTTCGGCTGGACCTTCTATGCGCCGCTGTCGACCACCTTCGCCCCGCACAGCGTGACCTTCTTCATCTTCGCCATCCACCTGGCCGGGATCAGCTCGATCATGGGCGCGATCAACGTGATCGCCACCATCCTCAACCTGCGCGCCCCGGGCATGACCCTGATGAAGATGCCGCTGTTCGTCTGGACCTGGCTGATCACCGCGTTCCTTTTGATCGCGGTGATGCCTGTGCTGGCCGGCGTGGTGACCATGATGCTGATGGACATCCACTTCGGCACCAGCTTCTTCAGCGCCGCCGGCGGCGGCGACCCGGTGCTGTTCCAGCACGTGTTCTGGTTCTTCGGCCACCCCGAGGTGTACATCATGATCCTGCCCGCCTTCGGTGCGGTCAGTGCGATCATCCCGACCTTCGCGCGCAAGCCGCTGTTCGGCTACACCTCGATGGTCTACGCCACCGCCAGCATCGCCTTCCTCTCCTTCGTGGTCTGGGCGCACCACATGTTCGTGGTCGGCATCCCGGTCACCGGCGAGCTGTTCTTCATGTACGCCACCATGCTGATCGCGGTGCCCACCGGGGTGAAGGTGTTCAACTGGGTGACCACCATGTGGGAGGGTTCGCTGACCTTCGAGACGCCGATGCTGTTCGCCGTGGCCTTCGTCATCCTGTTCACCATCGGCGGCTTCTCCGGACTGATGCTGGCGATCGCCCCGGCAGACTTCCAGTACCACGACACCTACTTCGTGGTCGCCCACTTCCACTACGTGCTGGTGCCCGGCGCGATCTTCGGCATCTTCGCCTCGGCTTACTACTGGCTGCCGAAGTGGACCGGCCACATGTACGACGAGACCCTCGGCAAGCTGCACTTCTGGATGAGCTTCATCGGCATGAACCTGGCGTTCTTCCCGATGCACTTCGTCGGCCTCGCCGGCATGCCGCGACGGATCCCCGACTACAACCTGCAGTTCGCCGACTTCAACATGGTCTCGTCGATCGGCGCCTTCATGTTCGGCACCACCCAGCTGCTGTTCCTGTTCATCGTCATCAAGTGCATCCGCGGCGGCAAGCCGGCCCCTGCCAAGCCCTGGGACGGCGCCGAGGGCCTGGAGTGGAGCATCCCCTCGCCGGCGCCCTACCACACCTTCAGCACCCCGCCCGAGGTCAAGTGA MSAVIDTPDHHAGDHHHGPAKGLMRWVLTTNHKDIGTLYLWFSFMMFLLGGSMAMVIRAELFQPGLQIVEPAFFNQMTTMHGLIMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPAAFGLLVSTLFMPGGGPNFGWTFYAPLSTTFAPHSVTFFIFAIHLAGISSIMGAINVIATILNLRAPGMTLMKMPLFVWTWLITAFLLIAVMPVLAGVVTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGHPEVYIMILPAFGAVSAIIPTFARKPLFGYTSMVYATASIAFLSFVVWAHHMFVVGIPVTGELFFMYATMLIAVPTGVKVFNWVTTMWEGSLTFETPMLFAVAFVILFTIGGFSGLMLAIAPADFQYHDTYFVVAHFHYVLVPGAIFGIFASAYYWLPKWTGHMYDETLGKLHFWMSFIGMNLAFFPMHFVGLAGMPRRIPDYNLQFADFNMVSSIGAFMFGTTQLLFLFIVIKCIRGGKPAPAKPWDGAEGLEWSIPSPAPYHTFSTPPEVK Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0107 CDS 130115 130669 + conserved hypothetical protein Class 4 NP_248797.1 15595305 PMID:15687295 55% similar to probable cytochrome c assembly protein [Paracoccus denitrificans] 1 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Energy metabolism Unknown[Class 3] ; Unknown[Class 3] PF04442|CtaG_Cox11, Cytochrome c oxidase assembly protein CtaG / Cox11|29|172|1e-57 COG3175|COX11, Cytochrome oxidase assembly factor [Posttranslational modification, protein turnover, chaperones]. ; COG3175|COX11, Cytochrome oxidase assembly factor [Posttranslational modification, protein turnover, chaperones]. ; COG3175|COX11, Cytochrome oxidase assembly factor [Posttranslational modification, protein turnover, chaperones]. ATGAGCGATGCCAAGGTCGATACCCGCCGCCTGGTCGGCCGCCTGCTGCTGGTGACCGTGCTGATGTTCGCCTTCGGCTTCGCCCTGGTGCCGCTCTATGACGTGATGTGCCGCGCCCTGGGGATCAACGGCAAGACCGCCGGCAGCGCCTACAGCGGCGAACAGCAGGTGGATGTCGGGCGCGAGGTGAAGGTGCAGTTCATGACCTCGAACAATATCGACATGGTCTGGGAGTTCCGCTCCGCCGGCGACCAGTTGGTGGTGCATCCCGGCGCGGTGAACCAGATGGTGTTCTACGCGCGCAACCCGAGCGACAAGCCGATGACCGCGCAGGCCATCCCGAGCATCGCCCCGGCCGAGGCCGCAGCCTACTTCCACAAGACCGAATGCTTCTGTTTCACCCAGCAGGTGCTGCAACCCGGCGAGAGCATCGAGATGCCGGTGCGCTTCATCGTCGACCGTGATCTGCCCAAGGATGTGCGGCACGTGACGCTGGCCTACACCCTCTTCGATATCACTGCGCGGAAGCCGCCCGTACCGGTTGCGGGACGATAA MSDAKVDTRRLVGRLLLVTVLMFAFGFALVPLYDVMCRALGINGKTAGSAYSGEQQVDVGREVKVQFMTSNNIDMVWEFRSAGDQLVVHPGAVNQMVFYARNPSDKPMTAQAIPSIAPAEAAAYFHKTECFCFTQQVLQPGESIEMPVRFIVDRDLPKDVRHVTLAYTLFDITARKPPVPVAGR Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0108 CDS 130680 131567 + coIII cytochrome c oxidase, subunit III Class 2 NP_248798.1 15595306 PMID:93077508 ; PMID:15687295 ; PMID:1332950 cytochrome c oxidase, subunit III [Rhodobacter sphaeroides] 7 predicted transmembrane helices ; PF00510: Cytochrome c oxidase subunit III ; 8 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius 1.9.3.1 Energy metabolism Cytoplasmic Membrane[Class 2] ; Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0006091|generation of precursor metabolites and energy|ISS ; biological_process|GO:0015990|electron transport coupled proton transport|IEA ; cellular_component|GO:0016021|integral to membrane|IEA ; molecular_function|GO:0004096|catalase activity|ISS ; molecular_function|GO:0008827|cytochrome o ubiquinol oxidase activity|IEA TIGR02842|CyoC|cytochrome o ubiquinol oxidase, subunit III|equivalog|5.5e-11|1.10.3.-|Energy metabolism|Electron transport PF00510|COX3, Cytochrome c oxidase subunit III|7|294|3e-54 COG1845|CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 [Energy production and conversion]. ; COG1845|CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 [Energy production and conversion]. ; COG1845|CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 [Energy production and conversion]. ATGGCAAGCCACGAACACTATTACGTCCCCGCCCAGAGCAAGTGGCCGATCATCGCCAGCATCGGCCTGCTGGTGACGGTGTTCGGCCTGGGTACCTGGTTCAACGACCTCACCGCCGGCCACAAGGAATCCCATGGCCCGTGGATCTTCTTCGTCGGCGGGCTGATCATCGCCTACATGCTGTTCGGCTGGTTCGGCAACGTCATCCGCGAGAGTCGCGCCGGACTCTACAGCGCGCAGATGGACCGCTCGTTCCGCTGGGGCATGAGCTGGTTCATCTTCTCCGAGGTGATGTTCTTCGCCGCCTTCTTCGGCGCGCTGTTCTACGTCCGCCACTTCGCCGGTCCCTGGCTCGGCGGCGAGGGTGCCAAGGGCGTGGCGCACATGCTCTGGCCGAACTTCCAGTACAGCTGGCCGCTGCTGCAGACCCCGGACCCGAAGCTGTTCCCGCCGCCGAGCGCGGTGATCGAGCCGTGGAAGCTGCCGCTGATCAACACCATCCTGCTGGTCACCTCCAGCTTCACCGTGACCTTCGCCCACCACGCCCTGAAGAAGAACAAGCGCGGCCCGCTCAAGGCCTGGCTGGCGCTGACCGTGCTGCTGGGGATCGCCTTCCTGATCCTGCAGGCCGAGGAGTACGTGCACGCCTACAACGAGCTGGGCCTGACCCTCGGCGCCGGCATCTACGGCTCGACCTTCTTCATGCTCACCGGCTTCCACGGCGCCCACGTGACCCTCGGCGCGCTGATCCTCGGCATCATGCTGATCCGCATCCTGCGCGGTCACTTCGATGCCGAGCACCACTTCGGCTTCGAGGCCGCCAGTTGGTACTGGCACTTCGTCGACGTGGTCTGGATCGGCCTGTTCATCTTCGTCTACGTGATCTGA MASHEHYYVPAQSKWPIIASIGLLVTVFGLGTWFNDLTAGHKESHGPWIFFVGGLIIAYMLFGWFGNVIRESRAGLYSAQMDRSFRWGMSWFIFSEVMFFAAFFGALFYVRHFAGPWLGGEGAKGVAHMLWPNFQYSWPLLQTPDPKLFPPPSAVIEPWKLPLINTILLVTSSFTVTFAHHALKKNKRGPLKAWLALTVLLGIAFLILQAEEYVHAYNELGLTLGAGIYGSTFFMLTGFHGAHVTLGALILGIMLIRILRGHFDAEHHFGFEAASWYWHFVDVVWIGLFIFVYVI Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0109 CDS 131583 131792 - hypothetical protein Class 4 NP_248799.1 15595307 PMID:15687295 2 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Membrane proteins Unknown[Class 3] ; Cytoplasmic Membrane[Class 3] ATGTTGAAAGTGGCGATCGTCCTGCTACTGCTGGCTACCCTGGTGAGCCTGTTCAGCGGCCTGTTCTTCCTGGTCAAGGACCAGGGCCATGGTTCCCGCGTGGTCAATTCGCTGACCGTCCGCGTGGTGCTCGCCGCGGCGACCCTGGTGCTGGTCGCCTGGGGCTTCTACAGCGGCGAGCTGAACAGCCACGCGCCCTGGCATTTCTGA MLKVAIVLLLLATLVSLFSGLFFLVKDQGHGSRVVNSLTVRVVLAAATLVLVAWGFYSGELNSHAPWHF Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0110 CDS 131808 132602 + hypothetical protein Class 4 NP_248800.1 15595308 PMID:15687295 2 predicted transmembrane helices ; 2 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Hypothetical, unclassified, unknown Outer Membrane[Class 3] ; Outer Membrane[Class 3] PF02104|SURF1, SURF1 family|36|138|4e-09 COG3346|COG3346, Uncharacterized conserved protein [Function unknown]. ; COG3346|COG3346, Uncharacterized conserved protein [Function unknown]. ; COG3346|COG3346, Uncharacterized conserved protein [Function unknown]. ATGGGGGGATTCATGCAGTATAGCCAGCGCCTCGGGGAGGCCGGACGCAATGACAGACGCAGCATGCGTGGCGCGTTCCGCCCCGGCCTGCTGCCGACCCTGGTGGTCCTCGGCCTGCTGCCGGTACTGCTCTGGCTGGGCACCTGGCAGTTGCAGCGGGCCGACGAGAAGCGCGCCCTGCTGGCCAGCTACGAGGCCCGGCGCGGCGCCGAGCCGGTGTCGCCCGGGCAGCTAGAGGGACTGCGCGACCCGGCGTACGTCCGCGTGCGCCTGCACGGCCGCTTCGACGAGCGGCATACGCTGCTGCTGGATAACCGGCTGCGCAACGGACAGGCCGGGGTCGAGGTGCTGCAACCCTTCTACGACCAGGCCAGCGGCCTTTGGCTGCTGGTCAACCGCGGCTGGGTCGCATGGACTGACCGACGCTCGCCGCCGACGCTGGAAACCCCCGACCGCGTCCTCCTGCTCGACGCCTGGACCTACCTGCCGCCACCCGGCGGCCTGCACCTGGCCGACGCGCCGGCCGGCGGCTGGCCGCGCCTGGTGACCCAGCTCGACATCCCGGCGCTGTGGCAGGCCTTCGGTCGCGCCGGGCTGCCCTGGGAAATCCGCCTGGAGCCGGGCGACGCCAGCTTCGACACCGATTGGCCCCTGGTCTCGATGCCGCCGGAGCGGCACACCGGCTACGCCGTGCAGTGGTTCGCCCTGGCGACGGCCCTGCTCGCCCTCTACCTCTACCTCGGTGTGCGCCGCGCACGGGAGAAAAACCATGAGTCTCGCGATTCCGATGCCTGA MGGFMQYSQRLGEAGRNDRRSMRGAFRPGLLPTLVVLGLLPVLLWLGTWQLQRADEKRALLASYEARRGAEPVSPGQLEGLRDPAYVRVRLHGRFDERHTLLLDNRLRNGQAGVEVLQPFYDQASGLWLLVNRGWVAWTDRRSPPTLETPDRVLLLDAWTYLPPPGGLHLADAPAGGWPRLVTQLDIPALWQAFGRAGLPWEIRLEPGDASFDTDWPLVSMPPERHTGYAVQWFALATALLALYLYLGVRRAREKNHESRDSDA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0111 CDS 132577 133155 + hypothetical protein Class 4 NP_248801.1 15595309 PMID:15687295 1 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] ATGAGTCTCGCGATTCCGATGCCTGAACGTCCGCGCCGCGCCCGTGGCCGCCTGCAACTGCTGGCGATCATCGGCCTGGTGGTGGGGCCGATGCTGCTCGCCAGCGCCATGTACAAATGGAATTTCTGGGTTCCGCAGGGGCGCAGCTACAGCGGCGCGCTGATCGGCAACGGCCAGACCCCCGCCGACCTCGGCGTGCAGGGACGCAGCCAGGGCGAGCAGTGGCAACTGCTGGTGACCGCGCCGGGTACTTGCGGCGAGGACTGCCAGCAACTGGTCTACCTGGCCCGCCAGATCAACATCGCCCTCGGCCGCGAAGCCTCGCGCGCCGGCCACGCCCTGGCCGCCAGCGGCGAGCTGCCGGCGGACTTCGCCAACCTGGTGAGGCAGGACTACCCGCGCCTGCAGCGCTACGGCCTGGACCCGGCCCTGTACGACAAGGCCGGCGGCGGCGAGCGGCCGCTGCTGTGGGTGGTCGACCCGCACGGCAACCTGGTGCTGCGCTACGACGCCAAGGCCAACGGCAAGAAGCTGCTGAAGGACGTGCAACTGCTGCTCAAGCTCTCGCATATCGGTTGA MSLAIPMPERPRRARGRLQLLAIIGLVVGPMLLASAMYKWNFWVPQGRSYSGALIGNGQTPADLGVQGRSQGEQWQLLVTAPGTCGEDCQQLVYLARQINIALGREASRAGHALAASGELPADFANLVRQDYPRLQRYGLDPALYDKAGGGERPLLWVVDPHGNLVLRYDAKANGKKLLKDVQLLLKLSHIG Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0112 CDS 133220 134293 + hypothetical protein Class 4 NP_248802.1 15595310 PMID:15687295 49% similar to a region of putative heme O oxygenase [Aquifex aeolicus] 8 predicted transmembrane helices ; type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 35) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 35) Membrane proteins Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] PF02628|COX15-CtaA, Cytochrome oxidase assembly protein|11|327|1e-16 COG1612|CtaA, Uncharacterized protein required for cytochrome oxidase assembly [Posttranslational modification, protein turnover, chaperones]. ; COG1612|CtaA, Uncharacterized protein required for cytochrome oxidase assembly [Posttranslational modification, protein turnover, chaperones]. ; COG1612|CtaA, Uncharacterized protein required for cytochrome oxidase assembly [Posttranslational modification, protein turnover, chaperones]. ATGTCAGGCGCAACCCGCAAACCCGGTTTCACCGTCGCCGTGCTGGCGACCCTGCTGGCCGCCGTGGTGGTCCTGCTCGGCGCCTATACCCGGCTGACCCACGCCGGCCTCGGCTGTCCGGACTGGCCAGGCTGCTACGGCTTCGTCCACGTGCCGCTGAGCGAGGCGCAACTGGCCCACGCCGAACTGCACTTCCCCGACGCCCCGGTGGAGGCGCAGAAGGGCTGGAACGAGATGATCCACCGCTATTTCGCCGGCGCCCTCGGCCTGCTCATCCTTGGCCTGGCGTTGCATGCGCTGGTCCGCCGCGGGCGCGACGGCCAACCGCTGAAGCTGCCGCTGCTGCTGCTCGCGGTGGTGATCGCGCAGGCCGCTTTCGGCATGTGGACGGTGACCCTCAAGCTCTGGCCGCAGGTGGTCACCGCCCATCTGCTCGGCGGCTTCACCACCCTGGCGCTGCTCTTTCTCCTCGCCCTGCGTCTCTCCGGACGCTTCGCGGCGCGGCGCTACCCGGCGGCGACCCGCGGACTGGCGGGGCTGGCCCTGCTCCTGGTGATCGGCCAGATCGCCCTCGGCGGCTGGGTCAGCAGCAACTACGCGGCGGTGGCCTGCATCGACCTGCCCACCTGCCATGGCGAGTGGTGGCCGCGGATGGACTTCGCCAACGGCTTCCACCTGACCCAGCACATCGGCCCCAACTACCTCGGCGGCCAGCTCGACAGCGACGCGCGCACGGCGATCCACATGACCCACCGGATCGGCGCGCTGTGCGTGACCCTGGTCCTCCTGCTGCTCGCCTGGCGCCTGCAGCGCAGCGGCCTGGTCTGGCCGACCGCGCTGATGCTGCTCGGCCTGTCGCTGCAGATCGGCCTGGGCATCAGCAACGTGCTGCTGCACCTGCCGCTGCCGGTGGCGGTGGCGCACAACGGCGGTGGCGCCCTGCTGCTGCTCAGCCTGGTGCTGGTCAACTATCGCCTGCGCGCGCCGGCCAGCGTCCGCGCGCCGGCACCGTCGCCGCAGCGCGTGCGCCGCACGCTGCCGCCGGCGCAAGGTTCGCGGCTGAAGGCCGCCTGA MSGATRKPGFTVAVLATLLAAVVVLLGAYTRLTHAGLGCPDWPGCYGFVHVPLSEAQLAHAELHFPDAPVEAQKGWNEMIHRYFAGALGLLILGLALHALVRRGRDGQPLKLPLLLLAVVIAQAAFGMWTVTLKLWPQVVTAHLLGGFTTLALLFLLALRLSGRFAARRYPAATRGLAGLALLLVIGQIALGGWVSSNYAAVACIDLPTCHGEWWPRMDFANGFHLTQHIGPNYLGGQLDSDARTAIHMTHRIGALCVTLVLLLLAWRLQRSGLVWPTALMLLGLSLQIGLGISNVLLHLPLPVAVAHNGGGALLLLSLVLVNYRLRAPASVRAPAPSPQRVRRTLPPAQGSRLKAA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0113 CDS 134319 135233 + probable cytochrome c oxidase assembly factor Class 3 NP_248803.1 15595311 PMID:15687295 59% similar to cytochrome c oxidase folding protein [Synechocystis sp.] 8 predicted transmembrane helices ; PS00943: Cytochrome c oxidase assembly factor COX10/ctaB/cyoE signature ; 9 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Energy metabolism Cytoplasmic Membrane[Class 2] ; Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0006783|heme biosynthetic process|IEA ; molecular_function|GO:0008495|protoheme IX farnesyltransferase activity|IEA TIGR01473|cyoE_ctaB|protoheme IX farnesyltransferase|equivalog|1.7e-153|2.5.1.-|Biosynthesis of cofactors, prosthetic groups, and carriers|Heme, porphyrin, and cobalamin PF01040|UbiA, UbiA prenyltransferase family|25|296|4e-40 COG0109|CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) [Posttranslational modification, protein turnover, chaperones]. ; COG0109|CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) [Posttranslational modification, protein turnover, chaperones]. ; COG0109|CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) [Posttranslational modification, protein turnover, chaperones]. ATGGCCACCGTCATCGATCGCCACAGCCAGCCGACCTGGCGCGACTTCCTCGAACTGACCAAGCCCAAGGTCGTGGTGCTGATGCTGATCACCTCGCTGATCGGCATGCTGCTCGCCACCAAGGCGCCGCTGGATGGCTTCGTGCCCTGGCAGGTGCTGATCTTCGGCAACCTCGGCATCGGCCTTTGTGCCGGCGCGGCAGCGGCGGTCAACCATGTGGTGGACCGGCGCATCGACTCGATCATGGCGCGGACCCACAAGCGGCCGCTGGCCGAGGGCCGGGTGTCGCCGAGCATGGCGCTGGGCTTCGCGCTGCTCCTGGCGCTGGCCGGGATGGCCGTGCTGCTGGCCTTCACCAACCCGCTGACGGCCTGGCTGACCCTCGCCTCGCTGCTCGGCTATGCGGCGCTCTACACCGGCTTCCTGAAGCGCGCCACGCCGCAGAACATCGTCATCGGCGGGCTCGCCGGGGCGGCGCCGCCGCTGCTCGGCTGGGTCGCCATCACCGGCCACCTGAGCGCCGAGCCGCTGTTGCTGGTACTGATCATCTTCGCCTGGACCCCACCGCACTTCTGGGCGCTCTGCATCCACCGCAAGGACGAATACGCCAAGGCCGACATCCCGATGCTGCCGGTGACCCACGGCGAGCGCTACACCAAGCTGCACATCCTGCTCTATACCCTGGTGCTGTTCGCGGTGAGCCTGATGCCGTTCGTCATCCACATGAGCGGGCTGGTCTATCTGCTCTGCGCCCTGGCCCTGGGCGCGCGCTTCCTCGACTGGGCCTGGGCGCTCTACTGTGACAGCCGGCCACATGCGGCGATAAAGACCTTCAAGTACTCTATCGTCTACCTGTTCCTGCTGTTCATGGCGCTGCTGGTGGACCACTATCTGCCGCTGAAGCTGCTTCTCTGA MATVIDRHSQPTWRDFLELTKPKVVVLMLITSLIGMLLATKAPLDGFVPWQVLIFGNLGIGLCAGAAAAVNHVVDRRIDSIMARTHKRPLAEGRVSPSMALGFALLLALAGMAVLLAFTNPLTAWLTLASLLGYAALYTGFLKRATPQNIVIGGLAGAAPPLLGWVAITGHLSAEPLLLVLIIFAWTPPHFWALCIHRKDEYAKADIPMLPVTHGERYTKLHILLYTLVLFAVSLMPFVIHMSGLVYLLCALALGARFLDWAWALYCDSRPHAAIKTFKYSIVYLFLLFMALLVDHYLPLKLLL Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0114 CDS 135259 135894 + conserved hypothetical protein Class 4 NP_248804.1 15595312 PMID:15687295 73% similar to hypothetical protein [Pseudomonas stutzeri] type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 28) ; type I export signal computationally predicted by Phobius (cleavage after residue 28) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 28) Hypothetical, unclassified, unknown Unknown[Class 3] ; Cytoplasmic Membrane[Class 3] PF02630|SCO1-SenC, SCO1/SenC|56|185|1e-31 COG1999|COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems [General function prediction only]. ; COG1999|COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems [General function prediction only]. ; COG1999|COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems [General function prediction only]. ATGACTCGAGTCAACAAGACCGTCCTCGTCCTCGTCGCCCTGGTCGCCCTGGTCCTCGGCCTCACCGTGCACAAGGTGCTCACCGCCCAGCGCCAGGCCGATCCCACCGTGCTGCTCGACGCCGGCATCGTGATCCTGCCGCAGACGCGCAAGGTGCCGGCGCTGGAGTTCACCAACCAGGACGGCCAGGCGGTCAGCACCGCCAGTCTCAAGGGTCGCTGGCACCTGCTGTTCTTCGGCTACACCTTCTGCCCCGATGTCTGCCCGACCACCCTCGCCCAGCTCCGCGAATTGCAGGGCAAGCTGCCGCAGGAGGTGCGCGACGACCTGCAGGTGGTATTCGTCAGCGTCGATCCGAACCGCGACACGCCGCAGCAGATCAAGCAATACCTGGGCTACTTCAACGCCGGCTTCCAGGGGCTCACCGGTACTCCGGAGAACATCCAGAAGCTGGCCAACGCCATGAGCATCCCCTACATCCCCGCCGACACCAGCAAGCCCAACTACACCGTCGACCACAGCGGCAACCTGGTGATCATCGGTCCGGACGGCGAGCAGCACGGCTTCATCCGCGCGCCGCTGAACAACGCCAAGCTGGAAGCCCAACTGCCCGGCGTGCTCAAGCCGCAGGCCTGA MTRVNKTVLVLVALVALVLGLTVHKVLTAQRQADPTVLLDAGIVILPQTRKVPALEFTNQDGQAVSTASLKGRWHLLFFGYTFCPDVCPTTLAQLRELQGKLPQEVRDDLQVVFVSVDPNRDTPQQIKQYLGYFNAGFQGLTGTPENIQKLANAMSIPYIPADTSKPNYTVDHSGNLVIIGPDGEQHGFIRAPLNNAKLEAQLPGVLKPQA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0115 CDS 135934 136386 - conserved hypothetical protein Class 4 NP_248805.1 15595313 elaA 69% similar to hypothetical protein ElaA [Escherichia coli] PF00583: Acetyltransferase (GNAT) family (weak) Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] PF00583|Acetyltransf_1, Acetyltransferase (GNAT) family|54|131|6e-07 COG2153|ElaA, Predicted acyltransferase [General function prediction only]. ; COG2153|ElaA, Predicted acyltransferase [General function prediction only]. ; COG2153|ElaA, Predicted acyltransferase [General function prediction only]. ATGTCGCTCGACTGGACCTGCAAGCACCACGCCGACCTCACCCTGAAGGAACTCTACGCACTGCTGCAATTGCGCACCGAGGTCTTCGTGGTGGAACAGAAATGCCCCTACCAGGAAGTCGACGGCCTCGACCTGGTCGGCGATACCCATCACCTGATGGCCTGGCGCGACGGCCAGTTGCTCGCCTACCTGCGCCTGCTGGACCCGGTTCGCCACGAGGGCCAGGTGGTGATCGGCCGGGTGGTCAGTTCCTCGGCCGCGCGCGGCCAGGGGCTCGGTCACCAGTTGATGGAACGCGCGCTGCAGGCGGCGGAGCGCCTCTGGCTGGACACCCCGGTGTACCTCTCGGCCCAGGCCCACCTGCAGGCCTACTACGGCCGCTATGGCTTCGTCGCGGTCACCGAGGTCTACCTGGAAGACGACATCCCGCACATCGGCATGCGCCGGGCCTGA MSLDWTCKHHADLTLKELYALLQLRTEVFVVEQKCPYQEVDGLDLVGDTHHLMAWRDGQLLAYLRLLDPVRHEGQVVIGRVVSSSAARGQGLGHQLMERALQAAERLWLDTPVYLSAQAHLQAYYGRYGFVAVTEVYLEDDIPHIGMRRA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0116 CDS 136518 136991 + hypothetical protein Class 4 NP_248806.1 15595314 65% similar to hypothetical protein Rv3095 [Mycobacterium tuberculosis] Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] PF01638|DUF24, HxlR-like helix-turn-helix|19|104|1e-18 COG1733|COG1733, Predicted transcriptional regulators [Transcription]. ; COG1733|COG1733, Predicted transcriptional regulators [Transcription]. ; COG1733|COG1733, Predicted transcriptional regulators [Transcription]. ATGCGTTGGGAAGAACTGAGCGAGCAACCCTGTTCGCTGGCGCGGGTGCTGGCGATCCTCGGCGATCGCTGGACCCTGCTGGTATTGCGCGACTGCTTTCTCGGCGTGCGCCGTTTCGACGACTTCGAGCGCAGCCTCGGCGTGACCCGCCACGTCCTCGCCGACCGCCTCAAGCGCCTTGTCGAAGCGGAGATACTGGCCAAGGTGCCCTACCAGGAAAGGCCGCTGCGCGAGGAATACCGGCTTACCGAGAAAGGGATGGAACTGTACCCGGCCATCCTTTCCCTGGTGAACTGGGGCGACCGCCACCTCGCCGGCGTCGAGGGGCCGCCACTCGAGCATGTGCACAAGCATTGCGGCCAGCACATGCATGGCGTGCTGGTCTGTTCCGAATGCGGTGAGCCGCTGCACGCGCGGGACGTGACGGTACGCGAGGGGCTGTTCTGGAAGGGGCGCCTGCTGCGGCGCGGCTGA MRWEELSEQPCSLARVLAILGDRWTLLVLRDCFLGVRRFDDFERSLGVTRHVLADRLKRLVEAEILAKVPYQERPLREEYRLTEKGMELYPAILSLVNWGDRHLAGVEGPPLEHVHKHCGQHMHGVLVCSECGEPLHARDVTVREGLFWKGRLLRRG Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0117 CDS 137248 137976 + probable short chain dehydrogenase Class 3 NP_248807.1 15595315 44% similar to putative alcohol dehydrogenase [Rhizobium leguminosarum bv. viciae] PF00106: Short chain dehydrogenase Putative enzymes Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] TIGR01963|PHB_DH|3-hydroxybutyrate dehydrogenase|subfamily|3.6e-08||No Data|No Data PF00106|adh_short, short chain dehydrogenase|5|171|1e-19 COG1028|FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]. ; COG1028|FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]. ; COG1028|FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]. ATGACCCAGCGCAAAGCGGTTCTGGTAATGGGCGCCGGCGACGCCACCGGTGGCGCCATCGCCCGGCGGTTCGCCCGCGAGGGCTACGTGGCGTGCGTCGCCCGGCGCAACGCGGAGAAGCTGGAGCCGCTGGTGCAGGCCATCCGCGACCAAGGCGGCGAGGCTCTGGCCTGCGGCTGCGACGCACGCCAGGAGCAGCAGGTGATCGACCTCTTCGCCCGCATCGAGGGTGAGGTCGGTGCGCTGGAGGCGGTGATCTTCAACGTCGGCGCCAACGTCTGGTTCCCGATCACCGAAACCACCGAACGGGTCTATCGCAAGGTCTGGGAGATGGCCGCCTTCGGCGGCTTCCTCACCGGCCGCGAGGCGGCGCGGGTGATGCTGCCGCGGCAGCGCGGAACGATCATCTTCACTGGCGCCACCGCCTCGTTGCGCGGCCGCGCGCATTTCGCCGCGTTCTCCGGCGCCAAGTTCGCCCTGCGTGCCCTGGCCCAGAGCATGGCGCGCGAGCTGGGGCCGAAGGACATCCACGTCGCCCACCCGATCATCGACGGCGCCATCGACACCGACTTCATCCGCGAAACCCTGCCCGAGCTGTACAAGCGCAAAGAGCAGGACGGCATCCTCGATCCCGAGCACATCGCCGAGACCTACTGGCAGATCCACTGCCAGCCGCGCGACTGCTGGGTGCACGAACTGGACCTGCGCCCCTGGATGGAAACCTTCTGA MTQRKAVLVMGAGDATGGAIARRFAREGYVACVARRNAEKLEPLVQAIRDQGGEALACGCDARQEQQVIDLFARIEGEVGALEAVIFNVGANVWFPITETTERVYRKVWEMAAFGGFLTGREAARVMLPRQRGTIIFTGATASLRGRAHFAAFSGAKFALRALAQSMARELGPKDIHVAHPIIDGAIDTDFIRETLPELYKRKEQDGILDPEHIAETYWQIHCQPRDCWVHELDLRPWMETF Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0118 CDS 138001 138588 + hypothetical protein Class 4 NP_248808.1 15595316 PMID:95095951 ; PMID:8002605 47% similar to 2-hydroxychromene-2-carboxylate isomerase NahD [Pseudomonas putida] Putative enzymes Unknown[Class 3] ; Unknown[Class 3] PF01323|DSBA, DSBA-like thioredoxin domain|4|194|1e-38 COG3917|NahD, 2-hydroxychromene-2-carboxylate isomerase [Secondary metabolites biosynthesis, transport, and catabolism]. ; COG3917|NahD, 2-hydroxychromene-2-carboxylate isomerase [Secondary metabolites biosynthesis, transport, and catabolism]. ; COG3917|NahD, 2-hydroxychromene-2-carboxylate isomerase [Secondary metabolites biosynthesis, transport, and catabolism]. ATGAGCAAGCAAATCGAGTTCTTCTTCGACTTCGGCAGTCCCACCACCTACCTCGCCTGGACCCAACTGCCGCGCATCGCCGCCGCCCATGGCGCGAGCATCGCCTGGCGGCCGATGCTGCTGGGCGGCGTGTTCAAGGCCACCGGCAACCATTCGCCGATCGAGGTGCCGGCCAAGGGGCGCTACACCCTCCACGACCTGGCGCGCTATGCGAAACGCTACGGCGTGCCGCTGGCCTTCAACCCGGCCTTCCCGATCAACACCCTGACGCTGATGCGCGGCGCCCAGGGCTATCTCGGCGGCGAAGGGTTCCAGCCCTACCTGAAAGCGGTGTTCGAAGCGTTGTGGGTACGACAGCAGAACCTCGGCAAGCCCGAGGTGGTCGCCCAGGTGCTGGCGGAGGCTGGATTCGATCCGGATGAGTTCCTCCGCCTGGTTGGCGACGAGCAGGTCAAGGAGGGGCTCAAGGCGACCACCGAAGAGGCGGTGCGGCGCGGCGTTTTCGGCGCGCCCAGCTTCTTCGTCGGCGACCAGTTGTTCTTCGGCCAGGATCGCCTCGATTTCGTCGCCGAGGTCCTCGCCGGCTGA MSKQIEFFFDFGSPTTYLAWTQLPRIAAAHGASIAWRPMLLGGVFKATGNHSPIEVPAKGRYTLHDLARYAKRYGVPLAFNPAFPINTLTLMRGAQGYLGGEGFQPYLKAVFEALWVRQQNLGKPEVVAQVLAEAGFDPDEFLRLVGDEQVKEGLKATTEEAVRRGVFGAPSFFVGDQLFFGQDRLDFVAEVLAG Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0119 CDS 138818 140167 + probable dicarboxylate transporter Class 3 NP_248809.1 15595317 PMID:92199261 ; PMID:94049668 ; PMID:15687295 ; PMID:2134335 ; PMID:8232193 67% similar to membrane-associated dicarboxylate transport protein DctA [Rhizobium meliloti] PS00713: Sodium:dicarboxylate symporter family signature 1 ; 10 predicted transmembrane helices ; 8 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Transport of small molecules Cytoplasmic Membrane[Class 2] ; Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] PF00375|SDF, Sodium:dicarboxylate symporter family|15|408|4e-87 COG1301|GltP, Na+/H+-dicarboxylate symporters [Energy production and conversion]. ; COG1301|GltP, Na+/H+-dicarboxylate symporters [Energy production and conversion]. ; COG1301|GltP, Na+/H+-dicarboxylate symporters [Energy production and conversion]. ATGGAGACTCCTGCGATGTTCATCAAGCGCTGTTCCCGCTCGATATTCCTGCAAGTCGTGATTGGCCTGGTGATAGGCGTGATCTGCGGGGTCGGCATTCCCGACCTGGCCGTGCAGATGAAGCCGCTGGGCGATGGCTTCATCAAGCTGATCAAGATGCTCATCGCACTGATCGTCTTCTGCGTGGTGGTCAACGGCATCTCCGGCGCCGGCGACCTGAAGAAGGTCGGCCGCATCGGCCTGAAGTCGGTGATCTACTTCGAAATCCTCACCACCATCGCCCTGGTCCTCGGCCTGGTGGTCGCCTACAGCCTGGGCCTGGGCAGCGGCGCCAACATCCATCTCAACGAACTGCCCGCCGGCGACGTCGCCCTGTATACCGGGCGCACCCAGGAGATCCACGGCCCCGTGGCATTCCTCATGGGCCTGATCCCGACCTCTGTGTTCAGCGCCTTCGCCGAGAACGACATCCTCCAGGTCCTGCTGTTCTCCGTGCTGTTCGGCAGCGCCCTGAACCTGGTCGGCGAGCAGGCCAGCGGCGTGGCCCGCCTGATCAACGAATTCAGCCACATCGTGTTCCGCATCATGGGCATGATCGTGCGCCTGGCACCGCTCGGCGTGTTCGGCGCGGTGGCCTTCACCACCGCCCGCTACGGCGTCGACTCGCTCAGCCACCTGGGCGCGCTGGTGCTGGTGTTCTACGCCACCTGCCTGGTCTTCGTCATGGCGGTGCTCGGTAGCGTCCTGCGTCTCTCCGGGGTGCGCATGCTGCCGTTCCTGCGCTACTTCCGCGAAGAGCTGCTGATCGTGATGGGCACCGCCTCCTCCGACGCGGTGCTGCCGCAGGTGATGCGCAAGCTCGAGCACATGGGCATCCGTAGCTCCACGGTAGGCCTGGTGATTCCCACCGGCTACTCGTTCAACCTCGACGGATTCTCGATCTACCTGACCCTGGCGGTGGTGTTCATCGCCCACGTCACCGGCACGCCGCTGGCGATGACCGACCTGATCACCATCCTGCTGGTTTCGCTGGTCACCTCCAAGGGCGCCCACGGCATTCCCGGCTCGGCCCTGGTGATCCTCGCCGCCACCCTCACCGCGGTGCCGGCGATCCCGGTGGCCGGCCTGGTGCTGGTGCTTTCGGTGGACTGGTTCATGGGCATCGGCCGCGCGCTGACCAACCTGATCGGCAACTGCGTGGCCACCGTGACCATCGCCCGCTGGGAAAACGACATCGATATGCCGCGCGCGCAGGCCATACTCGACGGGCGCCTGGAGGCGCCGGCCAAGGCCGACGGCGAGCCGCTCAAGCGCAGTGCGGTGGCCGGGGAAGGCAAGCTGCATGGCTGA METPAMFIKRCSRSIFLQVVIGLVIGVICGVGIPDLAVQMKPLGDGFIKLIKMLIALIVFCVVVNGISGAGDLKKVGRIGLKSVIYFEILTTIALVLGLVVAYSLGLGSGANIHLNELPAGDVALYTGRTQEIHGPVAFLMGLIPTSVFSAFAENDILQVLLFSVLFGSALNLVGEQASGVARLINEFSHIVFRIMGMIVRLAPLGVFGAVAFTTARYGVDSLSHLGALVLVFYATCLVFVMAVLGSVLRLSGVRMLPFLRYFREELLIVMGTASSDAVLPQVMRKLEHMGIRSSTVGLVIPTGYSFNLDGFSIYLTLAVVFIAHVTGTPLAMTDLITILLVSLVTSKGAHGIPGSALVILAATLTAVPAIPVAGLVLVLSVDWFMGIGRALTNLIGNCVATVTIARWENDIDMPRAQAILDGRLEAPAKADGEPLKRSAVAGEGKLHG Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0120 CDS 140216 140902 + probable transcriptional regulator Class 3 NP_248810.1 15595318 45% similar to putative transcriptional regulator LldR [Escherichia coli] PS00043: Bacterial regulatory proteins, gntR family signature Transcriptional regulators Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] TIGR03338|phnR_burk|phosphonate utilization associated transcriptional regulator|equivalog|2.1e-08||No Data|No Data PF07729|FCD, FCD domain|90|212|2e-20 COG2186|FadR, Transcriptional regulators [Transcription]. ; COG2186|FadR, Transcriptional regulators [Transcription]. ; COG2186|FadR, Transcriptional regulators [Transcription]. ATGTTTTCTTCGTCCAAGCTGGTCAACGCGGTTGCCCAGCGCCTGCTCGACACCATCGAGCAGGGTCGCTGGGTCGCCGGCCAGATGTTGCCCGGCCAGCGCGAGCTGGCTGAACAGATGGAAATCAGCCGGCCGAGCCTGCGCGAGGCGATCATGGTCCTGGAGACCCTGGGCGTGGTCCGTTCGCTGCCGGGCAAGGGCGTGATGGTCCTCGAACGCAGCGAACCGCTGCGCGAGGTCGCGGCGCCCGGCGAGGCGACCATGGAAGACGTCCTGCAACTGCGCTATGCGCTGGAGCCGTTCATCGTCGGCATCGTCGCGCAGAGCGCCGGGGCGGCGGAGATCAGCGAACTGCGGCTGTTGCTGCTGGACCTGCGCGAAGCGGTCGAGGATGGCGACCCGCAGGCTCTGGTTGAGGCCTACACGGCCTTCCACCGGCGCCTGGTGAAGCTCACCTCGAACCCGATCTTCCTCAGCGTTTCCGAACAGATCGGCAGCGCCCTGGAACGCAGCGACAACCTGGTGCGCCGCCAGCCGGAATACGCCGAGGAGATCCTCCAGGAACACGACGCCATCCTCCGTGCGATCCGCCAGCACGACAGCGAGCGGGCGAGCCAGGCGATGCGCCAGCACATCCTCAACGAAGGCGCGCGCCTGAACATCGACCTGCGCTTGCCGCAGGTCTGA MFSSSKLVNAVAQRLLDTIEQGRWVAGQMLPGQRELAEQMEISRPSLREAIMVLETLGVVRSLPGKGVMVLERSEPLREVAAPGEATMEDVLQLRYALEPFIVGIVAQSAGAAEISELRLLLLDLREAVEDGDPQALVEAYTAFHRRLVKLTSNPIFLSVSEQIGSALERSDNLVRRQPEYAEEILQEHDAILRAIRQHDSERASQAMRQHILNEGARLNIDLRLPQV Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0121 CDS 141003 141737 + hypothetical protein Class 4 NP_248811.1 15595319 44% similar to hypothetical transcriptional regulator [Streptomyces ambofaciens] PS00043: Bacterial regulatory proteins, gntR family signature (very weak) Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] TIGR03338|phnR_burk|phosphonate utilization associated transcriptional regulator|equivalog|5.5e-05||No Data|No Data PF07729|FCD, FCD domain|89|212|4e-13 COG1802|GntR, Transcriptional regulators [Transcription]. ; COG1802|GntR, Transcriptional regulators [Transcription]. ; COG1802|GntR, Transcriptional regulators [Transcription]. ATGGTCGGATTCGAAGCACGTACCCAGCAGGGCGCCGCGCTGCGCCCCACCAGCCATTTCGTCTACGAAAGCATCTACACGGCAATCCTGGAAAAGCGCCTGGCGCCGGCCGCCAAGCTGAGCAAGGAAACCCTCGGGCAGATCTTCCGGGTCAGCAACGGCACCATCCAGCGTGCCCTCACCCGTCTCGCCGAGGACGGCGCGGTGGTGATGCCGCCGAAGGAGGTCGCCAGCGTCGCCCGCCCGGACGAGCGCCAGGCGCGGCAGGTGCTGGACGCGCGCCTGCTGGTGGAAAGCGAAGTGGTGCGGCAACTGCCCGCGGGGCTGGATCCCGCCGCCCTTGCCGAGCTACGGGCGCTGGTCGACGAGGAGCAGGCTTGCCTCGCGGCCCGCGACAGCGCCGGGCTGATCCGTCTCGCCGGGCGCTTCCACCTGCGCCTGGCCGAACTGACCGAGAATCCCTTGCTGCAGGGTTTCGTCCGTGGCCTGGTGGCACGCGCCTCGCTGGACATCGCGCTGAACAAGGGGGCGGTCTATACCGCCGAGGCCTGCGCCGCGCAGCGCGCCCTGCTCGATGCCCTGGAGGACGGCGACAGCGCGGCGGCGGCTGCGCTGATGGACGCTTACCTGCGAGGCCTGTTCGCCCGCATGCGCTTCCTGCCGCCACCCACCACGGACCTGCGCGAGGCATTCGGCATGAAGGCCCCTAGCGGGGAAAAACGCCGGAGGGCCTGA MVGFEARTQQGAALRPTSHFVYESIYTAILEKRLAPAAKLSKETLGQIFRVSNGTIQRALTRLAEDGAVVMPPKEVASVARPDERQARQVLDARLLVESEVVRQLPAGLDPAALAELRALVDEEQACLAARDSAGLIRLAGRFHLRLAELTENPLLQGFVRGLVARASLDIALNKGAVYTAEACAAQRALLDALEDGDSAAAAALMDAYLRGLFARMRFLPPPTTDLREAFGMKAPSGEKRRRA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0122 CDS 141917 142327 + conserved hypothetical protein Class 4 NP_248812.1 15595320 PMID:94368843 ; PMID:8086452 58% similar to Asp hemolysin [Aspergillus fumigatus] Hypothetical, unclassified, unknown Unknown[Class 3] ; Extracellular[Class 3] PF06355|Aegerolysin, Aegerolysin|4|135|1e-37 ATGGCATACGCAGAATGGATCGCAGTGAAGGTCGTGGTATCCAAATCCATCGGCACGGTGGGCATCCGCAACGCCACCTTGCAATGGGGCAAGTTCTACCGCTACACCAACAAGGACGACGAGATTTCCACCGAGGAAGTCAGCAGCATGAACGTGCAGGCCGGCAGCCCGCAATGGATCGCCTCCTGCGGACGGGAGAACGCTTCGTCCGGCACCCAGGGCAGCTTCGACTGCTACGACGGCAACACCAAGATGGGCACCTTCAGCTGGGATGACCCGTGGAAATCCGGCGCCACCAACACCTGGAGCTTCACGCCGGCATCGGCGGACTATGCTGGCATCACCAGTGGCGGCAACGCTACGGGCACGGACATCGGCGAGGTCACCCTGACCCTCGGCCGCTTCTCCTGA MAYAEWIAVKVVVSKSIGTVGIRNATLQWGKFYRYTNKDDEISTEEVSSMNVQAGSPQWIASCGRENASSGTQGSFDCYDGNTKMGTFSWDDPWKSGATNTWSFTPASADYAGITSGGNATGTDIGEVTLTLGRFS Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0123 CDS 142359 143267 - probable transcriptional regulator Class 3 NP_248813.1 15595321 51% similar to transcriptional activator PtxR [Pseudomonas aeruginosa] PS00044: Bacterial regulatory proteins, lysR family signature Transcriptional regulators Unknown (This protein may have multiple localization sites)[Class 3] ; Unknown (This protein may have multiple localization sites)[Class 3] TIGR03418|chol_sulf_TF|putative choline sulfate-utilization transcription factor|hypoth_equivalog|1.9e-09||No Data|No Data PF00126|HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family|4|62|9e-16 COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription]. ATGGATTCGCTGAAAGGCATGGCGATCTTCGCCACTGTGGTGGACAAGGGCTCGATGGCAGCCGCGGCCCAGAGCCTGGGCATGACCCCTTCGGCAGTCAGCCAGCAGATCCGCAAGCTGGAAAGCCGCGCCCAGGTCACTTTGCTGCATCGCACCACCCGCCGGCTGACCCTGACCGAGGCCGGCGAGGCGTTCTATCGCAGTTGCGCGCAGATGCTGGCGATCGCCGAGGAAGCCGAGCGGCGGCTTGGCGAATGGCGCGATGCGCCGGTGGGTGAGTTGCGCCTGGCGGCGCCGGTGGGGTTCTCCGGCACGCTGATCACCCAGGCGCTGAAACCGTTGCTGGAGAACCACCGCCAGTTGCGCCTGCAGCTGTTCTTCCAGGACGAGCGCATCGATCTGGTCGCCGAGCGCATCGACCTGGCGATACGCGTCGGCAATCTCGCCGACTCCAGCCTGGTGGCGCGCCACCTCGGCGATTGGAGCAGCGTGCTCTGCGCGGCGCCGGCCTATTTGCGCCAACGGGCGCCCATCAACCGTCCGGAGCAGTTGACCGAGGTCGACTGGATTTCCCTGAACACCTCGAACCACCTCAACCACCTGACGCTCAGCGGGCCGGGCGGGGAAGTCTGCAAACTGCGCCTGGAGCCACGGGTGGCCGCCAACGGGATGCTCGCGGTGCGTCAGTTCACCCTCGACGGACTCGGCGTGTCCTACCAGCCGCTGCCGGAGGTGCGCGACGCGCTGAACGACGGGCGCCTGCAACAGCTATTGCCGGAGTGGAGGATTCCCGGGCTCGGCATCTATGCGGTGACGCCACGGCGCGAGGCCCAGCCGGCCAAGGTGAAGGTCGCCATCGAGGCGCTGCGGCGAGCGTTCGCCACGGACGGGGATGAGCGCTGGAGCTGA MDSLKGMAIFATVVDKGSMAAAAQSLGMTPSAVSQQIRKLESRAQVTLLHRTTRRLTLTEAGEAFYRSCAQMLAIAEEAERRLGEWRDAPVGELRLAAPVGFSGTLITQALKPLLENHRQLRLQLFFQDERIDLVAERIDLAIRVGNLADSSLVARHLGDWSSVLCAAPAYLRQRAPINRPEQLTEVDWISLNTSNHLNHLTLSGPGGEVCKLRLEPRVAANGMLAVRQFTLDGLGVSYQPLPEVRDALNDGRLQQLLPEWRIPGLGIYAVTPRREAQPAKVKVAIEALRRAFATDGDERWS Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0124 CDS 143567 143848 - hypothetical protein Class 4 NP_248814.1 15595322 Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] PF05016|Plasmid_stabil, Plasmid stabilisation system protein|3|86|6e-05 COG3668|ParE, Plasmid stabilization system protein [General function prediction only]. ; COG3668|ParE, Plasmid stabilization system protein [General function prediction only]. ; COG3668|ParE, Plasmid stabilization system protein [General function prediction only]. ATGAGCCTGAAGTGGACCCGCAAGGCGGCCGCCGACCTGGACGCCATCTACGACCATTACGTCGTGCTGATCGGCCCGGAAAAAGCTCTGAAAGCCGTTCAGGACATCGTCGAGCAGGTGAAACCGCTGCAGCAGGTAGCCAACCAGGGGGCAGGGCGGCCCAGCGAGGTGCCAGGCGTACGCACCCTGACCCTGGAGCGCTGGCCGTTCAGCGCCCCGTTTCGGGTTAAAGGCAAGGAAATCCAGATTTTGCGCATCGACAGAGTCGAAATTACCCCCTGA MSLKWTRKAAADLDAIYDHYVVLIGPEKALKAVQDIVEQVKPLQQVANQGAGRPSEVPGVRTLTLERWPFSAPFRVKGKEIQILRIDRVEITP Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0125 CDS 143845 144072 - hypothetical protein Class 4 NP_248815.1 15595323 Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Unknown[Class 3] PF01402|RHH_1, Ribbon-helix-helix protein, copG family|4|42|5e-05 COG3905|COG3905, Predicted transcriptional regulator [Transcription]. ; COG3905|COG3905, Predicted transcriptional regulator [Transcription]. ; COG3905|COG3905, Predicted transcriptional regulator [Transcription]. ATGAGCACCGTAGTCTCGTTCCGCGCCGATGACGCCCTGGTCGCGGCCCTCGACGAACTGGCCCGCGCCACCCACCGCGACCGACCCTACCACCTGCGGCAGGCGCTCGCGCAGTACCTGGAAAGGCAGCAGTGGCAGGTCGCTGCCATCGATGAAGGCTTGGCCGATGCCAATGCCGGTCGCCTGCTGGAACACATCGAGATCGAGAAGCGCTGGGGGCTGCAATGA MSTVVSFRADDALVAALDELARATHRDRPYHLRQALAQYLERQQWQVAAIDEGLADANAGRLLEHIEIEKRWGLQ Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0126 CDS 144248 144868 - hypothetical protein Class 4 NP_248816.1 15595324 PMID:15687295 Type II (lipoprotein) export signal predicted by LipoP (cleavage after residue 19) ; Export across inner membrane confirmed by PhoA fusion screen Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] ATGCCTACACGCGTTCTGCGCGGCCTCGTCGCCGCCCTCCCACTGTTCCTCGCCGCCTGCTCGGACTCCGCTCCGTCCAGCGAGGAGATCGCCCGCCTGCTCGCCGAGCGCGGCTTCGACAAACCCGCCTGCGCCAGCTCCACCCTGTTCAAGACGTTCCCGGTGACGCTCTCCGACAGCTTCTCCGGCCCCGGCCCGGCGAAAGGCAACGCCGCGGTCTACGACGCGCTGGTCGGCGTCGGCCTGCTGCGCCGCGACGGCGATTCCTACGACCTCACGCCCGCCGGCCGCGAGGACTACAAGCCCGAGTCGAAGGCCTTCTGCTACAGCAGCGGCTTCGACGTCAGCGTCCGTTCGGTGGACCCCGCCAAGCCCGACGACTACGGCCCGGCCGTGGAAAAGGGCTGGTTGGTCACCGTCGAGGTCAAGCCACGCGAAGTGAAGGACTGGGCGAAGAACCCCGAGGTGCTCAAGCAGGCCAGCCTGACCACCCTGCAACAGATCACCCAACCGCAGGTCGGCCAGGTCTCGCTGGTCAAGCCACGCGGCGAGGAAGGCTACAAGCTCGTCAACACCCGCTTCTCGCCCAGGCAGGGCTTCCACTTCAACCAGGCCTGGTAA MPTRVLRGLVAALPLFLAACSDSAPSSEEIARLLAERGFDKPACASSTLFKTFPVTLSDSFSGPGPAKGNAAVYDALVGVGLLRRDGDSYDLTPAGREDYKPESKAFCYSSGFDVSVRSVDPAKPDDYGPAVEKGWLVTVEVKPREVKDWAKNPEVLKQASLTTLQQITQPQVGQVSLVKPRGEEGYKLVNTRFSPRQGFHFNQAW Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0127 CDS 144969 145469 + hypothetical protein Class 4 NP_248817.1 15595325 PMID:15687295 Type II (lipoprotein) export signal predicted by LipoP (cleavage after residue 22) Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] COG5608|COG5608, Conserved secreted protein [Function unknown]. ; COG5608|COG5608, Conserved secreted protein [Function unknown]. ; COG5608|COG5608, Conserved secreted protein [Function unknown]. ATGCGCCTGCCTGCGAACCTCGGCCGCCTGCTGCCGGCCCTGTGCCTGGGCGTCCTGTTGAGCGCCTGCAGCACCTTCGGCCAGCGCGATCCGTTGCGTATCGACCTGGTCGGCCTGGAACCCCTGCCGGGGCAAGGCATGGAGATGCGCTTCATGGTCAAGCTGCGGGTACAGAACCCCAACGACGAGCCGATCGAATACAACGGCATCGCCCTCGACCTCGACGTCAACGGCCAGCCCCTGGCCAGCGGCGTCAGCGACCAGACCGGCGAGGTGCCGCGCTTCGGCGAGCGGGTGGTGAGCGTGCCGCTGACCGTCTCCGCCTTTTCCGCCTTCCGCCAGGCCTGGGGCCTGAGCAACAACGCTCCGACCCAGGGCATGCCCTACGTGGTGAAGGGCAAGCTCGCCGGAGGCCTGTTCGGCACCGTGCGCTTCAGCGAAAAGGGCACCCTCGACTTCTCCGGGCCGGCCGTCGGCGCGCCGAAGACCAAGGGGCTCTGA MRLPANLGRLLPALCLGVLLSACSTFGQRDPLRIDLVGLEPLPGQGMEMRFMVKLRVQNPNDEPIEYNGIALDLDVNGQPLASGVSDQTGEVPRFGERVVSVPLTVSAFSAFRQAWGLSNNAPTQGMPYVVKGKLAGGLFGTVRFSEKGTLDFSGPAVGAPKTKGL Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0128 CDS 145542 145883 + conserved hypothetical protein Class 4 NP_248818.1 15595326 phnA PMID:90170953 ; PMID:2155230 Not in phosphonate utilization operon, which is elsewhere. 85% similar to putative alkylphosphonate uptake protein PhnA [Escherichia coli] Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] TIGR00686|phnA|putative alkylphosphonate utilization operon protein PhnA|hypoth_equivalog|3.1e-58||Unknown function|General PF08274|PhnA_Zn_Ribbon, PhnA Zinc-Ribbon|3|32|8e-15 COG2824|PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism]. ; COG2824|PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism]. ; COG2824|PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism]. GTGAGCACGCTGCCGCCCTGTCCCCAATGCAACTCCGAATACACCTACGAGGATGGTGCGCTGCTGGTCTGCCCGGAGTGCGCCCATGAATGGTCGCCGAACGAGGCCGCTACGGCGTCCGATGATGGCAAGGTGATCAAGGATTCGGTGGGCAACGTTCTCCAGGACGGCGATACCATCACCGTGATCAAGGACCTGAAAGTGAAAGGCTCCTCGCTGGTGGTGAAGGTCGGCACCAAGGTGAAGAACATCCGCTTGGTGGACGGCGACCACGACATCGATTGCAAGATCGACGGCATTGGCGCGATGAAGCTGAAATCGGAATTCGTCAGGAAGGTCTGA MSTLPPCPQCNSEYTYEDGALLVCPECAHEWSPNEAATASDDGKVIKDSVGNVLQDGDTITVIKDLKVKGSSLVVKVGTKVKNIRLVDGDHDIDCKIDGIGAMKLKSEFVRKV Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0129 CDS 145965 147392 - gabP gamma-aminobutyrate permease Class 2 NP_248819.1 15595327 PMID:94127927 ; PMID:15687295 ; PMID:8297211 77% similar to gamma-aminobutyrate permease GabP [Escherichia coli] 12 predicted transmembrane helices ; PS00218: Amino acid permeases signature ; 12 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Transport of small molecules Cytoplasmic Membrane[Class 2] ; Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0006810|transport|IEA ; biological_process|GO:0009450|gamma-aminobutyric acid catabolic process|IEA ; molecular_function|GO:0015495|gamma-aminobutyric acid:hydrogen symporter activity|IEA TIGR01773|GABAperm|GABA permease|equivalog|0||Transport and binding proteins|Amino acids, peptides and amines PF00324|AA_permease, Amino acid permease|26|432|5e-84 COG1113|AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism]. ; COG1113|AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism]. ; COG1113|AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism]. ATGTCCAAAGTCGTACTGGCTTCACAACTGCCGAACAAGCGCAACGCCTCGCTCGCGCCCGGCCTGAAACAACGCCACGTCACCATGCTGTCGATCGCCGGGGTGATCGGCGCCGGCCTGTTCGTCGGCTCCGGCCATGCCATCGCCGCCGCCGGCCCGGCCGCCCTGCTCGCCTACCTGATCGCCGGCACCCTGGTGGTGCTGGTCATGCGCATGCTCGGCGAAATGGCGGTCGCCTCCCCCGATACCGGTTCCTTCTCCACCTACGCCGACCGCTCCATCGGCCGCTGGGCCGGTTTCACCATCGGCTGGCTCTACTGGTGGTTCTGGGTGCTGGTGATCCCACTCGAAGCGATCGCCGCCGCGGCCATCCTCAACGCCTGGTTCCCGGCCATCGACACCTGGATCTTCGCCCTCGCGGTGACCTTCCTGCTCACCGTCACCAACCTCTTCAGCGTGGCCCGCTACGGCGAGTTCGAGTTCTGGTTCGCGCTGCTCAAGGTGATCGCCATCATCGCCTTCATCGTGCTCGGCGCGGTGGCCATCGTCGGCGGCCTGCCGGAGCGTGAGGTCAGCGGCCTGTCCAGCCTGATGGCGAGCCACGGCGGCTTCGTGCCGAACGGCTACGGCGCGGTGCTCGGCGCCCTGCTGACGACCATGTTCAGCTTCATGGGCACCGAGATCGTCACCATCGCCGCCGCCGAGTCCAAGGACCCGGCGAAGCAGATCACCCGCGCCACCAACTCGGTGATCTGGCGGATCGGCCTGTTCTACCTGGTGTCGATCTTCATTGTGATCTCCATCGTGCCGTGGAACGACCCGCTGCTGATCCAGGTCGGCTCCTACCAGCGCGCCCTGGAGCTGCTGGACATCCCGCACGCCAAGCTGATCGTCGACCTGGTGGTACTGGTCGCCGTGGCCAGTTGCCTGAACTCGGCGATCTACACCTCGTCGCGGATGGTCTTCTCCCTGGCCAAGCGCGGCGACGCCCCGAGCGTGCTCAAGCTGACCAACACCGCCCACGTACCACGCCCGGCGGTGCTGGCCAGCACCGCGGTGGGCTTCCTCACCACCATCGTCAACTACTTCGCACCGGAGAAGGTCTTCACCTTCCTCCTCGCCAGCTCCGGCGCCGTGGCGCTACTGGTGTACCTGGTGATCGCCGTGGCCCAGTTGCGCATGCGCAAGCAATTGCAGGCCAGCGGCCAGCCCATCGAGTTCCGTATGTGGCTATATCCCTGGCTGACCTGGGCGGTGATCCTGTTCATCGTCGCCGCGCTGAGCATCATGCTGATCATGCCGGAGCACCGACACGAGGTGTTCGCCACCGCTCTGCTGACGATCTTCACCGTCTGCCTCGGGCTGCTCAACGCGCGACGCAAGCCGCGCCTCGGCGAGGACTACGCCGGGAAGACGGCGCGGGTCTGA MSKVVLASQLPNKRNASLAPGLKQRHVTMLSIAGVIGAGLFVGSGHAIAAAGPAALLAYLIAGTLVVLVMRMLGEMAVASPDTGSFSTYADRSIGRWAGFTIGWLYWWFWVLVIPLEAIAAAAILNAWFPAIDTWIFALAVTFLLTVTNLFSVARYGEFEFWFALLKVIAIIAFIVLGAVAIVGGLPEREVSGLSSLMASHGGFVPNGYGAVLGALLTTMFSFMGTEIVTIAAAESKDPAKQITRATNSVIWRIGLFYLVSIFIVISIVPWNDPLLIQVGSYQRALELLDIPHAKLIVDLVVLVAVASCLNSAIYTSSRMVFSLAKRGDAPSVLKLTNTAHVPRPAVLASTAVGFLTTIVNYFAPEKVFTFLLASSGAVALLVYLVIAVAQLRMRKQLQASGQPIEFRMWLYPWLTWAVILFIVAALSIMLIMPEHRHEVFATALLTIFTVCLGLLNARRKPRLGEDYAGKTARV Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0130 CDS 147561 149054 - probable aldehyde dehydrogenase Class 3 NP_248820.1 15595328 PMID:92317087 ; PMID:1339433 68% similar to methylmalonate semialdehyde dehydrogenase MmsA [Pseudomonas aeruginosa] PS00687: Aldehyde dehydrogenases glutamic acid active site Putative enzymes Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0006574|valine catabolic process|IEA ; molecular_function|GO:0004491|methylmalonate-semialdehyde dehydrogenase (acylating) activity|IEA TIGR01722|MMSDH|methylmalonate-semialdehyde dehydrogenase (acylating)|equivalog|1e-272|1.2.1.27|Energy metabolism|Amino acids and amines PF00171|Aldedh, Aldehyde dehydrogenase family|13|477|1e-137 COG1012|PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion]. ; COG1012|PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion]. ; COG1012|PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion]. ATGGGCACCCTCCACCACCTGATCAACGGCGAAATGGTCGCCGACAACGGCCGCAGCGCCGACGTCTTCAACCCCTCCACCGGCGAAGCCATCCACAAGGTCCCGCTGGCCGACGGCAAGACCCTGCAGAAAGCCATCGATGCCGCCAGGGCCGCTTTCCCGGCCTGGCGCAACACCCCGCCGGCCAAGCGTGCACAGGTGCTGTACCGCTTCAAGCAACTGCTGGAGCAGAACGAGGCGCGGATTTCCAAGCTGATCAGCGAAGAGCACGGCAAGACCCTGGAAGACGCCGCCGGCGAACTCAAGCGCGGCATCGAGAACGTCGAGTACGCCTGCGCCGCCCCGGAAATCCTCAAGGGCGAGTACAGCCGCAACGTCGGCCCGAACATCGACGCCTGGAGCGACTTCCAGCCGATCGGCGTGGTCGCCGGGATCACCCCGTTCAACTTCCCGGCGATGGTGCCGCTGTGGATGTACCCGCTGGCCATCGCCTGCGGCAACACCTTCATCCTCAAGCCCTCCGAGCGCGACCCCAGCTCCACCCTGCTGATCGCCGAGCTGTTCCACGAAGCCGGCCTGCCGAAGGGCGTGCTGAACGTGGTGCACGGCGACAAGGAAGCCGTGGACGGCTTGCTCCAGGCGCCGGAAGTGAAAGCCATCAGCTTCGTCGGCTCGACCCCCATCGCCGAATACATCTATGCCGAGGGCACCAAGCGCGGCAAGCGCGTGCAGGCCCTGGGCGGCGCGAAGAACCATGCGGTGCTGATGCCCGACGCCGACCTCGACAACGCCGTCAGCGCGTTGATGGGTGCCGCCTACGGCTCCTGCGGCGAGCGCTGCATGGCGATCTCGGTGGCGGTATGCGTCGGCGACCAGGTGGCCGACGCGCTGATCGCCAAGCTGGTTCCGCAGATCAAGGCGCTGAAGATCGGCGCCGGCACTTCCTGCGGCCTCGACATGGGCCCGCTGGTCACTGCCGCCGCGCAGGCCAAGGTCACCGGCTACATCGACAGCGGCGTGGCCCAGGGCGCGGAGCTGGTGGTGGACGGCCGCGGCTACCAGGTCGCCGGCCACGAGAACGGCTTCTTCCTCGGCGGCAGCCTGTTCGACCGGGTGACCCCGGAAATGACCATCTACAAGGAAGAGATCTTCGGCCCGGTGCTGTGCGTGGTTCGCGTCAACAGCCTGGAAGAGGCCATGCAGTTGATCAACGACCACGAATACGGCAACGGCACCTGCATCTTCACCCGCGACGGCGAGGCCGCACGCCTGTTCTGCGACGAGATCGAGGTCGGCATGGTCGGCGTCAACGTCCCGCTGCCGGTGCCGGTGGCCTACCACAGCTTCGGCGGCTGGAAGCGCTCGCTGTTCGGCGACCTCCACGCCTACGGCCCGGACGGCGTGCGCTTCTACACCCGGCGCAAGGCCATCACCCAGCGCTGGCCGCAGCGGGCCAGCCACGAGGCCTCGCAATTCGCCTTCCCCAGCCTCTGA MGTLHHLINGEMVADNGRSADVFNPSTGEAIHKVPLADGKTLQKAIDAARAAFPAWRNTPPAKRAQVLYRFKQLLEQNEARISKLISEEHGKTLEDAAGELKRGIENVEYACAAPEILKGEYSRNVGPNIDAWSDFQPIGVVAGITPFNFPAMVPLWMYPLAIACGNTFILKPSERDPSSTLLIAELFHEAGLPKGVLNVVHGDKEAVDGLLQAPEVKAISFVGSTPIAEYIYAEGTKRGKRVQALGGAKNHAVLMPDADLDNAVSALMGAAYGSCGERCMAISVAVCVGDQVADALIAKLVPQIKALKIGAGTSCGLDMGPLVTAAAQAKVTGYIDSGVAQGAELVVDGRGYQVAGHENGFFLGGSLFDRVTPEMTIYKEEIFGPVLCVVRVNSLEEAMQLINDHEYGNGTCIFTRDGEAARLFCDEIEVGMVGVNVPLPVPVAYHSFGGWKRSLFGDLHAYGPDGVRFYTRRKAITQRWPQRASHEASQFAFPSL Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0131 CDS 149138 149425 - hypothetical protein Class 4 NP_248821.1 15595329 Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] ATGAGCGGCCGCCCGCAAGCCGTACCCACCGTGCAGGTGGACAACGCCGAGGTGATCGTGACCGAATGGCGCTTCGCCCCCGGCGCGGAAACCGGGCGCCACCGCCACGGCCACGACTATGTGGTGGTACCGCTGACCGACGGCACGCTGCTGCTGGAAACCCCCGAGGGCGACCGCCACGCGCCGCTGGTCGCCGGACAGGCCTACTTCCGCAAGGCCGGCGTCGAGCACAACGTGATCAACGCCAGCGCACACGAAGTGGTCTTCGTCGAGACCGAGATCAAGTAA MSGRPQAVPTVQVDNAEVIVTEWRFAPGAETGRHRHGHDYVVVPLTDGTLLLETPEGDRHAPLVAGQAYFRKAGVEHNVINASAHEVVFVETEIK Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0132 CDS 149425 150771 - beta-alanine--pyruvate transaminase Class 2 NP_248822.1 15595330 oapT omega-amino acid--pyruvate transaminase PMID:92316928 ; PMID:1618757 87% similar to beta-alanine--pyruvate transaminase [Pseudomonas putida] PS00600: Aminotransferases class-III pyridoxal-phosphate attachment site 2.6.1.18 Amino acid biosynthesis and metabolism Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0006520|amino acid metabolic process|ISS ; biological_process|GO:0009102|biotin biosynthetic process|IEA ; molecular_function|GO:0004015|adenosylmethionine-8-amino-7-oxononanoate transaminase activity|IEA ; molecular_function|GO:0004644|phosphoribosylglycinamide formyltransferase activity|ISS TIGR00508|bioA|adenosylmethionine-8-amino-7-oxononanoate transaminase|equivalog|5e-53|2.6.1.62|Biosynthesis of cofactors, prosthetic groups, and carriers|Biotin PF01212|Beta_elim_lyase, Beta-eliminating lyase|193|362|1e-06 COG0161|BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]. ; COG0161|BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]. ; COG0161|BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]. ATGAACCAGCCGCTCAACGTGGCCCCGCCGGTTTCCAGCGAACTCAACCTGCGCGCCCACTGGATGCCCTTCTCCGCCAACCGCAACTTCCAGAAGGACCCGCGGATCATCGTCGCCGCCGAAGGCAGCTGGCTGACCGACGACAAGGGCCGCAAGGTCTACGACAGCCTGTCCGGCCTGTGGACCTGCGGCGCCGGCCACTCGCGCAAGGAAATCCAGGAGGCGGTGGCTCGCCAGCTCGGCACCCTCGACTACTCGCCGGGCTTCCAGTACGGCCATCCGCTGTCCTTCCAGTTGGCCGAGAAGATCGCCGGGTTGCTGCCAGGCGAACTGAACCACGTGTTCTTCACCGGTTCCGGCTCCGAGTGCGCCGACACCTCGATCAAGATGGCCCGCGCCTACTGGCGCCTGAAAGGCCAGCCGCAGAAGACCAAGCTGATCGGCCGCGCCCGCGGCTACCACGGGGTCAACGTCGCCGGCACCAGCCTCGGCGGGATCGGTGGCAACCGCAAGATGTTCGGCCAGCTGATGGACGTCGACCATCTGCCGCACACCCTTCAACCGGGCATGGCGTTCACCCGCGGGATGGCCCAGACCGGCGGCGTCGAGCTGGCCAACGAGCTGCTCAAGCTGATCGAACTGCACGACGCCTCGAACATCGCCGCGGTGATCGTCGAGCCGATGTCCGGCTCCGCCGGCGTACTGGTACCGCCGGTCGGCTACCTGCAGCGCCTGCGCGAGATCTGCGACCAGCACAACATCCTGCTGATCTTCGACGAGGTGATCACCGCCTTCGGCCGCCTGGGCACCTACAGCGGCGCCGAGTACTTCGGCGTCACCCCGGACCTGATGAACGTCGCCAAGCAGGTCACCAACGGCGCCGTGCCGATGGGCGCGGTGATCGCCAGCAGCGAGATCTACGACACCTTCATGAACCAGGCGCTGCCCGAGCACGCGGTGGAGTTCAGCCACGGCTACACCTACTCCGCGCACCCGGTCGCCTGCGCCGCCGGCCTCGCCGCGCTGGACATCCTGGCCAGGGACAACCTGGTGCAGCAGTCCGCCGAGCTGGCGCCGCACTTCGAGAAGGGCCTGCACGGCCTGCAAGGCGCGAAGAACGTCATCGACATCCGCAACTGCGGCCTGGCCGGCGCGATCCAGATCGCCCCGCGCGACGGCGATCCGACCGTGCGTCCGTTCGAGGCCGGCATGAAGCTCTGGCAACAGGGTTTCTACGTGCGCTTCGGCGGCGATACCCTGCAATTCGGCCCGACCTTCAACGCCAGGCCGGAAGAGCTGGACCGCCTGTTCGACGCGGTCGGCGAAGCGCTCAACGGCATCGCCTGA MNQPLNVAPPVSSELNLRAHWMPFSANRNFQKDPRIIVAAEGSWLTDDKGRKVYDSLSGLWTCGAGHSRKEIQEAVARQLGTLDYSPGFQYGHPLSFQLAEKIAGLLPGELNHVFFTGSGSECADTSIKMARAYWRLKGQPQKTKLIGRARGYHGVNVAGTSLGGIGGNRKMFGQLMDVDHLPHTLQPGMAFTRGMAQTGGVELANELLKLIELHDASNIAAVIVEPMSGSAGVLVPPVGYLQRLREICDQHNILLIFDEVITAFGRLGTYSGAEYFGVTPDLMNVAKQVTNGAVPMGAVIASSEIYDTFMNQALPEHAVEFSHGYTYSAHPVACAAGLAALDILARDNLVQQSAELAPHFEKGLHGLQGAKNVIDIRNCGLAGAIQIAPRDGDPTVRPFEAGMKLWQQGFYVRFGGDTLQFGPTFNARPEELDRLFDAVGEALNGIA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0133 CDS 150906 151823 + probable transcriptional regulator Class 3 NP_248823.1 15595331 47% similar to transcriptional regulator OxyR [Mycobacterium xenopi] PS00044: Bacterial regulatory proteins, lysR family signature Transcriptional regulators Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] TIGR03339|phn_lysR|aminoethylphosphonate catabolism associated LysR family transcriptional regulator|subfamily|4.3e-06||No Data|No Data PF03466|LysR_substrate, LysR substrate binding domain|101|303|6e-19 COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription]. ATGGCCAAATCCCGCAACCCGTCGCTCGGCCAGGTCAGCGATTTCGATATCCGCCTGCTGCGCATCTTCAAGACCATCGTCGAGTGCGGCAGTTTCTCCGCCGCGGAGAGCACTCTCGGCCTCAGCCGCTCGGCGATCAGCCTGCACATGGGCGACCTGGAGAAGCGCCTGGGCATGCGCCTGTGCCAGCGCGGCCGCGCCGGCTTCGCCCTGACCGACGAGGGCCGCGAGGTCTATCGCGCGACCCAGACCCTGCTGGCGGCGCTGGAGGGGTTCCGCGCCGAGGTCAACGACCTGCACCAGCACCTGCGCGGCGAACTCAACATCGGCATCATCAACAACCTGGTGACCCTGCCGCAGATGCGCATCACCCACGCTCTCAGCGCGCTCAAGGGGCAGGGACCGCAGGTGCGGATCAACATCGGCATGACCACCCCCAACGAGATCGAACTGGGCGTGCTCGACGGCCACCTGCATGTCGGCGTGGTGCCGTTGATCAGTCCGCTGTCGGGGCTCGAGTACCTGCCGCTGTATGACGAGCACGCGCAGCTCTATTGCAGCCGCGGCCACGCACTGTTCGAGCGCGCCGACGGCGATATCGCGGTGGACGAGGTGCTCGCCGCGGACGCCGTGGCGCCCAGCTACCGCCTGCCCGCCGAAGCCCAGGCGCGCCACCAGGAGCTGAACAACAGCGCCAGCGCCTCGGACCGTGAGGGCATGGCATTCCTGATCCTGACCGGCAACTTCATCGGCTACCTGCCGTCGCACTACGCTGCCGACTGGGTCGCCGCCGGGATGCTGCGGCCCCTGCTGCCGGAGCGTTTCCACTATGCCATCGCGCTGACCATCGTGACCCGCAAGGGACGCCGGCCGAACCTGGTGCTGGAGCGCTTCCTGGAGGCGGTGGCGGTGTCGTGA MAKSRNPSLGQVSDFDIRLLRIFKTIVECGSFSAAESTLGLSRSAISLHMGDLEKRLGMRLCQRGRAGFALTDEGREVYRATQTLLAALEGFRAEVNDLHQHLRGELNIGIINNLVTLPQMRITHALSALKGQGPQVRINIGMTTPNEIELGVLDGHLHVGVVPLISPLSGLEYLPLYDEHAQLYCSRGHALFERADGDIAVDEVLAADAVAPSYRLPAEAQARHQELNNSASASDREGMAFLILTGNFIGYLPSHYAADWVAAGMLRPLLPERFHYAIALTIVTRKGRRPNLVLERFLEAVAVS Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0134 CDS 151936 153306 - probable guanine deaminase Class 3 NP_248824.1 15595332 gda2 47% similar to guanine deaminase GDA [Homo sapiens] ; 70% similar to hypothetical protein YgfP [Escherichia coli] Purine metabolism [PseudoCAP] ; salvage pathways of guanine, xanthine, and their nucleosides [PseudoCyc] 3.5.4.3 Nucleotide biosynthesis and metabolism Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0006147|guanine catabolic process|IEA ; molecular_function|GO:0008892|guanine deaminase activity|IEA TIGR02967|guan_deamin|guanine deaminase|equivalog|4.7e-290|3.5.4.3|Purines, pyrimidines, nucleosides, and nucleotides|Other PF01979|Amidohydro_1, Amidohydrolase family|90|409|3e-21 COG0402|SsnA, Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]. ; COG0402|SsnA, Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]. ; COG0402|SsnA, Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]. ATGAACGATGCAGTACCTGCTGGCAACTTCGTCCCCCCACTTATCCTGCACTCCGACCACGGCGGGAGCGCGATGAGCAGTTCGGCTCATCGCGGGCGGATCCTGCATTTCCTCGGCGACCCGGCGAAACTCGGCGACAAGGCCTGGGAGTATTTCGAGGACGGCCTGCTGTGGATCGAACACGGCCACGTGCGCGCGCTCGATCACGCAACCTACCTGCTGCCGCAACTGCCCGCCGACCTGCCGCTGGAGGAGCATCCGCAGCGCCTGCTGCTGCCCGGCTTCGTCGATTGCCATGTGCATTACCCGCAACTCGGAGTGATCGCCTCCTACGGCACCCAACTGCTGGACTGGCTGGAAACCCACACCTTTCCCGCCGAGCAGCGCTTTGCCGATGCCGGCTACGCCGCCGCCCAGGCCGAGCTGTTCCTCGACGAACTGCTGCGCCACGGCACCACTACCGCGCTGGTGTTCGGCACGGTCCATGCGGTATCCGCCGAGGCATTCTTCCAGGCCGCGCAGAAGCGCCGCCTACGGATGATCGCCGGCAAGGTGCTGATGGACCGCAACGCGCCGCCGGCGCTGTGCGATACCGCGGCCAGTGGCTACGCCGAGAGCCGCGCGCTGATCGAGCGCTGGCACGGCAACGGGCGCCTGCAATACGCGGTCACCCCGCGCTTCGCGCCGACCTCCTCGCCCGAGCAACTGGCCGCGGCGGCGCGCCTGCTGGACGAGTATCCCGGCGTCTACCTGCACACCCATCTTTCGGAGAACCTCAAGGAAGTCGCCTGGGTCGGCGAGCTGTTTCCCCAGGCGCAGGACTACCTGGACGTCTATCATCGCGCCGGCCTGGTCGGCGAACGCAGCGTGTTCGCCCATGGCATCCATCTCTCCGAACGCGAATGCCGCTGCCTGGCGCACAAGAACGCGGCGCTGGCGCACTGTCCCAGTTCCAACCTGTTCATCGGCTCCGGCCTGTTCGACCTTGGCCGCGCCCAGCAATACGGCATCCGCGTCGGCATCGGCAGCGACGTCGGCGGCGGCACCAGCCTGTCGCTGCTGGCCAACCTCGCCGACGCCTACAAGATCCAGCAATTGCGCGGCACCAGCCTCGATCCGTTCCAGGCGCTCTACCTGGCCACCCTCGGCGGCGCCAGGGCGCTCGACCTGGACGGCCTGGTCGGTAACTTCCTGCCCGGCCGCGAAGCCGACTTCGTCGCCCTCGACCTGGCCGCCACGCCGATGATCGCCCAGCGCATGGAGCATGCGCGCGGCCTGGCCGATACCCTGTTCGTGCTGAACACCCTGGGCGACGACCGCGCGGTGGCGGAGACCTGGGTGATGGGGGAGCGGCGCCATGTGAAGGGGTGA MNDAVPAGNFVPPLILHSDHGGSAMSSSAHRGRILHFLGDPAKLGDKAWEYFEDGLLWIEHGHVRALDHATYLLPQLPADLPLEEHPQRLLLPGFVDCHVHYPQLGVIASYGTQLLDWLETHTFPAEQRFADAGYAAAQAELFLDELLRHGTTTALVFGTVHAVSAEAFFQAAQKRRLRMIAGKVLMDRNAPPALCDTAASGYAESRALIERWHGNGRLQYAVTPRFAPTSSPEQLAAAARLLDEYPGVYLHTHLSENLKEVAWVGELFPQAQDYLDVYHRAGLVGERSVFAHGIHLSERECRCLAHKNAALAHCPSSNLFIGSGLFDLGRAQQYGIRVGIGSDVGGGTSLSLLANLADAYKIQQLRGTSLDPFQALYLATLGGARALDLDGLVGNFLPGREADFVALDLAATPMIAQRMEHARGLADTLFVLNTLGDDRAVAETWVMGERRHVKG Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0135 CDS 153696 153836 + hypothetical protein Class 4 NP_248825.1 15595333 Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] GTGGAATGCGCCACGACGGTGCATCGCGAAACTGTGGACAGCGGATCCACCCATGGCGCCGCCGAGCATGCTTCCGTCGATCGCCGCGGACTTTCCTGGAAAGCCGGAAAACCCAGTATTCATGGGCATCATGGCGTCTAA MECATTVHRETVDSGSTHGAAEHASVDRRGLSWKAGKPSIHGHHGV Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0136 CDS 154417 155988 + probable ATP-binding component of ABC transporter Class 3 NP_248826.1 15595334 59% similar to putative ribose ABC transporter, ATP-binding protein [Archaeoglobus fulgidus] PS00211: ABC transporters family signature Transport of small molecules Cytoplasmic Membrane[Class 2] ; Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0015753|D-xylose transport|IEA ; cellular_component|GO:0009898|internal side of plasma membrane|IEA ; cellular_component|GO:0055052|ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing|IEA ; molecular_function|GO:0005524|ATP binding|IEA ; molecular_function|GO:0015614|D-xylose-importing ATPase activity|IEA TIGR02633|xylG|D-xylose ABC transporter, ATP-binding protein|equivalog|2.2e-56||Transport and binding proteins|Carbohydrates, organic alcohols, and acids PF00005|ABC_tran, ABC transporter|37|220|3e-45 COG3845|COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only]. ; COG3845|COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only]. ; COG3845|COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only]. ATGTCCGCACCTTCCTCCTTCGCGCCGCCGCGCCTCGAACTGCGCGGGATCAGCAAGCGTTATCCGGGTTGCCTGGCCAACGACCGCATCGACCTGTGCATCGACGCCGGCGAGATCCACGCCCTGCTCGGTGAGAACGGCGCCGGCAAGAGCACGCTGATGAAGATCATCTACGGCGTGACCCGTCCCGATGCCGGCGAGATCCGCTGGCAGGGCGAGCCAGTGCAGGTACGCGACCCGGCTCGCGCCCGGGCGCTGGGGATCGGCATGGTGTTCCAGCATTTCTCCCTGTTCGAGACGCTCAGCGTGGCGGAGAACATCGCGCTCGCCCTCGGCGCCGAGGCGGGCAGCCCGCGCCGGTTGGAGGCGCGTATTCGCGAGGTGTCGCAGCGCTACGGCATGCCGCTGGAGCCTCGCCGGCTGGTCCATGGGCTGTCCATCGGCGAGCGCCAGCGGGTGGAGATCGTGCGCTGCCTGATGCAGGACATCCGCCTGCTGATCCTCGACGAGCCGACCTCGGTGCTGACCCCGCGCGAGGCCGAGGATCTCTTCGTCACCCTGCGCCGTCTTGCGGAGGAGGGTTGCAGTGTCCTCTTCATCAGCCACAAGCTGGCCGAGGTCCGTGCGCTCTGCCAGCGCGCCACGGTGCTGCGCGGCGGACGGGTGGCCGGACAGTGCGTGCCGGCGCAATGTTCCGATCTCGAGCTGGCGCGGCTGATGGTGGGCGACGCCGAGGGCCTGGCGGCGGAGTATCCGAAGGTCACCGGCGGCGCGCCTTTCCTCCAGGTGCGCGACCTGCACTGGCGCAACCCGGACCCCTTCGGCGTGTCCTTCGCTGGCCTCGACCTGGAGGTGCGCAGCGGCGAGATCCTCGGTATCGCCGGGGTCGCCGGCAACGGCCAGGACGAGTTGCTTGCCCTGCTCAGCGGCGAAGTGCGCCTGCCGCGCGCCCAGGCCGAGCGCATCCGCCTCGGCGGCTGCGCCGGCGCGCACCTGGCGCCGGATGCGCGGCGCCGCGCCGGCCAGGCCTTCGTGCCCGCCGAGCGGCTGGGGCACGGCGCGGTGCCGGAGATGAGCCTGGCGGACAATGCGCTGCTCACCGCCTTCCAGCAGGGACTGGTGAAGCGCGGGTTGGTCCGGCGGCGCAAGGTGCTGGCGCTGGCCGAGGAGATCATCCGCCGTTTCGCCGTGAAGGCCCCGGGTGCCGGGGCGCCGGCACGCAGCCTTTCCGGCGGCAACCTGCAGAAGTTCATTCTCGGCCGCGAGATCCTCCAGGCCCCGCGCCTGCTGGTGGCGGCGCATCCCACCTGGGGCGTGGACGTCGGCGCGGCGGCGCTGATCCACCGCGCGCTGATCGCCTTGCGCGATGCCGGTACGGCGATCCTGGTGGTCTCCGAGGACCTCGACGAGCTGTTCCTGCTCAGCGACCGCATCGCCGCGCTGTGTTCGGGTCGGCTGTGCCCGGCGGTCGCCACCGCGAGCGCTTCGCCGCAGAAGGTCGGCGGCTGGATGGCCGGTCAATTCGAGGCGCCGGCGGCGGTCGCCGGCGCCGTTGCCCAAGGGAGCCTGTGA MSAPSSFAPPRLELRGISKRYPGCLANDRIDLCIDAGEIHALLGENGAGKSTLMKIIYGVTRPDAGEIRWQGEPVQVRDPARARALGIGMVFQHFSLFETLSVAENIALALGAEAGSPRRLEARIREVSQRYGMPLEPRRLVHGLSIGERQRVEIVRCLMQDIRLLILDEPTSVLTPREAEDLFVTLRRLAEEGCSVLFISHKLAEVRALCQRATVLRGGRVAGQCVPAQCSDLELARLMVGDAEGLAAEYPKVTGGAPFLQVRDLHWRNPDPFGVSFAGLDLEVRSGEILGIAGVAGNGQDELLALLSGEVRLPRAQAERIRLGGCAGAHLAPDARRRAGQAFVPAERLGHGAVPEMSLADNALLTAFQQGLVKRGLVRRRKVLALAEEIIRRFAVKAPGAGAPARSLSGGNLQKFILGREILQAPRLLVAAHPTWGVDVGAAALIHRALIALRDAGTAILVVSEDLDELFLLSDRIAALCSGRLCPAVATASASPQKVGGWMAGQFEAPAAVAGAVAQGSL Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0137 CDS 155988 157085 + probable permease of ABC transporter Class 3 NP_248827.1 15595335 PMID:15687295 59% similar to ribose ABC transporter, permease protein [Archaeoglobus fulgidus] 9 predicted transmembrane helices ; PF01032: FecCD transport family ; DM00914: BINDING-PROTEIN-DEPENDENT TRANSPORT SYSTEMS INNER MEMBRANE ; 9 predicted transmembrane helices (TMHMM v.2.0) Membrane proteins ; Transport of small molecules Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] PF02653|BPD_transp_2, Branched-chain amino acid transport system / permease component|59|338|1e-35 COG4603|COG4603, ABC-type uncharacterized transport system, permease component [General function prediction only]. ; COG4603|COG4603, ABC-type uncharacterized transport system, permease component [General function prediction only]. ; COG4603|COG4603, ABC-type uncharacterized transport system, permease component [General function prediction only]. ATGCTGTTGTCCCTGGAACCGCGCGGCCGGCAGTCGCGCTGGATGCTGCTGGCCTCTCCGCTGCTGGCGGGGTTGCTGACCCTGGTCTGCGGCGCGCTGCTGTTCGCCTGTCTCGGCCACGATCCCTGGCAGACCCTGCATACCGTGCTGGTACAGCCGCTCAGCGACCTCTATGGGCTCGGCGAGCTGCTGGTCAAGGCCATGCCGATCCTGCTCTGTGCCCTCGGCCTGGCACTGGCCTACCAGGCGCGCGTGTGGAACATCGGCGCGGAGGGCCAGTTGCTGGTCGGCGCCCTGGCCGGCAGCGCGGTGGCGATCCAGTTGCTCGACTGGCAGAGCCGCTGGGCGCTGGCCTGGGTGCTGCTCGCCGGCACCGCTGCCGGGGCGCTCTGGGCCGGGTTCGCCGCCTGGCTGCGAACGCGCTTCAACGCCAACGAGATCCTGACCACCATCATGCTCAACTACATCGCGCTGAACCTGCTGCTGTACGGCGTGCACGGGCCGTTGAAGGACCCGGACGGCTTCAACTTCCCGCAGTCGGCGCTGTTCGGCGAGGCCAGCCGCCTGCCGGCGCTGTTCGAGGACAGCCGGGTGCACCTTGGCGCATTGTTCGGCCTGCTGGCGCTGGCGGCGGTCTGGGTGCTGGCGCAGCGCAGCTTCCTCGGTTTCCAGGTCCGCGTGCTCGGCCTCGACCGCCGCGCCGCCGGTTTCGTCGGTTTCCGCGAGAAGCGCCTGGTCTGGTTCGTGCTGCTGTTCTCCGGCGCGCTGGCAGGCCTGGCCGGCGTCTGCGAGGTCGCCGGGCCGATCGGCCAACTGGTGCCGCAGGTCTCGCCGGGCTACGGCTATGCGGCGATCACCGTGGCCTTCCTTGGCCGTCTCAATCCGTTCGGCATCCTCTGCGCCAGCCTGCTGATGGCGTTGCTCTACCTCGGCGGCGAGGCCGCGCAGATGAGCCTCAACCTGCCATTGGCGCTGTCCGGGCTGTTCCAGGGGATGATGCTGTTCTTCCTCCTCGCCTGCGACGTGCTGATCCTCTACCGCCCACGTTTGCACGGACGCTGGCGCAAGCGCCCGGCGCTGCGCGACGCCCTGGCCTGA MLLSLEPRGRQSRWMLLASPLLAGLLTLVCGALLFACLGHDPWQTLHTVLVQPLSDLYGLGELLVKAMPILLCALGLALAYQARVWNIGAEGQLLVGALAGSAVAIQLLDWQSRWALAWVLLAGTAAGALWAGFAAWLRTRFNANEILTTIMLNYIALNLLLYGVHGPLKDPDGFNFPQSALFGEASRLPALFEDSRVHLGALFGLLALAAVWVLAQRSFLGFQVRVLGLDRRAAGFVGFREKRLVWFVLLFSGALAGLAGVCEVAGPIGQLVPQVSPGYGYAAITVAFLGRLNPFGILCASLLMALLYLGGEAAQMSLNLPLALSGLFQGMMLFFLLACDVLILYRPRLHGRWRKRPALRDALA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0138 CDS 157108 158034 + probable permease of ABC transporter Class 3 NP_248828.1 15595336 PMID:15687295 63% similar to putative ribose ABC transporter, permease protein [Archaeoglobus fulgidus] 7 predicted transmembrane helices ; DM00914: BINDING-PROTEIN-DEPENDENT TRANSPORT SYSTEMS INNER MEMBRANE ; 9 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Membrane proteins ; Transport of small molecules Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] PF02653|BPD_transp_2, Branched-chain amino acid transport system / permease component|9|282|9e-22 COG1079|COG1079, Uncharacterized ABC-type transport system, permease component [General function prediction only]. ; COG1079|COG1079, Uncharacterized ABC-type transport system, permease component [General function prediction only]. ; COG1079|COG1079, Uncharacterized ABC-type transport system, permease component [General function prediction only]. ATGGATATCGATCTGCTCGACAACCTGCTGTTCGCCATGGTCCGCACCGGTACTCCGCTGCTGCTGGTGGCCCTGGGCGAACTGGTCTGCGAGAGAAGCGGGGTGCTCAACCTGGGCCAGGAGGGGATGATGCTGTTCGGCGCGGTGATCGGCTTCATGGTCGCCTTCTCCAGCGGCAGCCTGTGGCTCGGCGTGCTCCTCGCGGTGCTCGCCGGCATGCTGCTGGCGGCGCTGTTCGCCGGGGTCGCCCTGTACCTGAACGCCAACCAGGTGGCCTGCGGCCTGGCGCTGACCATCTTCGGCGTCGGCCTGGCGTCGTTCGTCGGCGCCGCCTGGGTCGGCAAGCCGCTGCAAGGGTTCGCCCCGCTGGCGCTGCCGGTGCTGGGCGAGTTGCCGCTGCTCGGGCGCATGCTGTTCGCCCAGGACGCGCTGGTCTACCTGAGCCTGGCGCTGTTCGCCGCGGTCGCCTGGATGCTCCTGCGCAGCCGCGCCGGGCTGGTTCTCCAGGCGGTCGGCGAGAACCCTGACGCGGCCAGCGCGATGGGCCTGCCGGTGCTGCGCGTGCGCACCCTGGCGGTGCTCTTCGGCGGCGCCATGGCCGGCCTGGCCGGTGCCTACCTGTCGCTGGCCTACACGCCGATGTGGGCGGAGAACATGACCGCCGGACGCGGCTGGATCGCCCTGGCGCTGGTGGTCTTCGCCAGTTGGCGGGTGCTCCGCGTGCTGCTCGGTGCCTGGTTGTTCGGCCTGGCCAGCATCCTGCACCTGGTGGCCCAGGGGGTCGGGCTGTCGATTCCGGCCAACCTGCTGGCGATGCTGCCCTATGCGGCGACCATCCTGGTGCTGGTCCTGCTCTCCCGCGATGCCCTGCGCACCCGGCTGTATGCCCCGGTTTCCCTGGGCCAGCCGTGGAAGGCCGGGCACTGA MDIDLLDNLLFAMVRTGTPLLLVALGELVCERSGVLNLGQEGMMLFGAVIGFMVAFSSGSLWLGVLLAVLAGMLLAALFAGVALYLNANQVACGLALTIFGVGLASFVGAAWVGKPLQGFAPLALPVLGELPLLGRMLFAQDALVYLSLALFAAVAWMLLRSRAGLVLQAVGENPDAASAMGLPVLRVRTLAVLFGGAMAGLAGAYLSLAYTPMWAENMTAGRGWIALALVVFASWRVLRVLLGAWLFGLASILHLVAQGVGLSIPANLLAMLPYAATILVLVLLSRDALRTRLYAPVSLGQPWKAGH Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0139 CDS 158199 158762 + ahpC alkyl hydroperoxide reductase subunit C Class 2 NP_248829.1 15595337 PMID:97334113 ; PMID:9190810 92% similar to alkyl hydroperoxide reductase subunit C [Xanthomonas campestris] PF00578: AhpC/TSA family Adaptation, Protection Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0006979|response to oxidative stress|IEA ; biological_process|GO:0050896|response to stimulus|ISS ; molecular_function|GO:0008785|alkyl hydroperoxide reductase activity|RCA ; molecular_function|GO:0051920|peroxiredoxin activity|IEA TIGR03137|AhpC|peroxiredoxin|equivalog|1.5e-109|1.11.1.15|Cellular processes | Cellular processes|Detoxification | Adaptations to atypical conditions PF10417|1-cysPrx_C, C-terminal domain of 1-Cys peroxiredoxin|145|182|5e-06 COG0450|AhpC, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]. ; COG0450|AhpC, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]. ; COG0450|AhpC, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]. ATGTCCCTGATCAACACTCAAGTCCAACCGTTCAAGGTCAACGCTTTCCACAACGGCAAGTTCATCGAGGTGACCGAGGAATCCCTGAAGGGCAAGTGGTCGGTCCTGATCTTCATGCCGGCTGCCTTCACCTTCAACTGCCCGACCGAGATCGAAGACGCCGCCAACAACTACGGCGAGTTCCAGAAAGCCGGTGCCGAGGTCTACATCGTGACCACCGACACCCACTTCTCGCACAAGGTCTGGCACGAAACCTCCCCGGCAGTCGGCAAGGCCCAGTTCCCGCTGATCGGCGACCCGACCCACCAGCTGACCAACGCCTTCGGCGTGCACATCCCGGAAGAAGGCCTGGCCCTGCGCGGTACCTTCGTGATCAACCCGGAAGGCGTGATCAAGACCGTCGAGATCCACTCCAACGAGATCGCCCGTGACGTCGGCGAGACCGTGCGCAAGCTGAAGGCCGCCCAGTACACCGCCGCCCACCCGGGCGAAGTCTGCCCGGCCAAGTGGAAGGAAGGCGAGAAGACCCTCGCTCCGTCCCTGGACCTGGTCGGCAAGATCTAA MSLINTQVQPFKVNAFHNGKFIEVTEESLKGKWSVLIFMPAAFTFNCPTEIEDAANNYGEFQKAGAEVYIVTTDTHFSHKVWHETSPAVGKAQFPLIGDPTHQLTNAFGVHIPEEGLALRGTFVINPEGVIKTVEIHSNEIARDVGETVRKLKAAQYTAAHPGEVCPAKWKEGEKTLAPSLDLVGKI Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0140 CDS 158907 160472 + ahpF alkyl hydroperoxide reductase subunit F Class 2 NP_248830.1 15595338 PMID:97334113 ; PMID:9190810 87% similar to alkyl hydroperoxide reductase subunit F [Xanthomonas campestris] PS00573: Pyridine nucleotide-disulphide oxidoreductases class-II active site Adaptation, Protection Cytoplasmic[Class 2] ; Cytoplasmic[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0006805|xenobiotic metabolic process|IEA ; biological_process|GO:0009398|FMN biosynthetic process|IEA ; biological_process|GO:0050896|response to stimulus|ISS ; molecular_function|GO:0008785|alkyl hydroperoxide reductase activity|RCA ; molecular_function|GO:0016668|oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor|IEA TIGR03140|AhpF|alkyl hydroperoxide reductase, F subunit|equivalog|0|1.8.1.-|Cellular processes | Cellular processes|Detoxification | Adaptations to atypical conditions PF00070|Pyr_redox, Pyridine nucleotide-disulphide oxidoreductase|356|449|3e-09 COG3634|AhpF, Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones]. ; COG3634|AhpF, Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones]. ; COG3634|AhpF, Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones]. ATGTTGGACGCCAATCTTAAAACCCAGTTGAAGGCCTACCTGGAAAAGGTCAGCCAGCCGTTCGAGATCGTCGCGTCCCTCGATGACAGCGACAAATCCCGCGAGCTGCTGGGCCTGCTGCAAGACATCGTCGGCCTGACCGACAAGATCACCCTGAAGACCGACGGCAGCGATGCGCGCAAACCGTCGTTCTCGCTGAACCGCCCCGGTGCGGACATCGGCCTGCGCTTCGCCGGTATCCCCATGGGCCACGAATTCACCTCGCTGGTGCTGGCCCTGCTGCAGGTAGGCGGCCACCCCTCCAAGCTCGACGCGGACGTGATCGAGCAGGTCAAGGGCATCGAGGGCACCTTCGAGTTCGAAACCTACTTCTCGCTGTCCTGCCAGAACTGCCCGGACGTGGTCCAGGCGCTGAACCTGATGGCCGTGCTCAACCCGAACATCCGTCACGTCGCCATCGACGGCGCGCTGTTCCAGGATGAGGTCGAGGCGCGCCAGATCATGTCGGTGCCGAGCATCTACCTCAACGGCGAAGTCTTCGGCCAGGGCCGCATGGGCGTGGAAGAGATCCTCGCCAAGATCGACACCGGCGCCGCCGCCCGCGACGCCGAGAAGCTGACCGCCCGCGACGCCTTCGACGTGCTGGTGGTCGGCGGTGGCCCGGCCGGCGCCGCGGCGGCGATCTACGCCGCGCGCAAGGGCATTCGCACCGGCGTCGCCGCCGAGCGCTTCGGCGGCCAGGTGCTGGACACCATGGCCATCGAGAACTTCATCTCGGTGCAGGAGACCGAAGGGCCGAAGCTGGCACGGGCGCTGGAAGAGCACGTGCGTCACTACGAGGTCGACATCATGAACCTGCAGCGCGCCAGCAAGCTGGTTCCGGCGAAGAACGCCGGCGAGTTGCACGAGGTGCGGTTCGAGAGCGGCGGCAGCCTCAAGGCCAAGACCCTGATCCTCGCCACCGGCGCTCGCTGGCGCGAAATGGGCGTGCCCGGCGAGCAGGAGTACAAGGCCAAGGGCGTGTGCTTCTGCCCGCACTGCGACGGCCCGCTGTTCAAGGGCAAGCGCGTGGCGGTGATCGGCGGCGGCAACTCTGGCGTCGAGGCGGCCATCGACCTGGCCGGCATCGTCGCCCATGTGACCCTGCTGGAATTCGACAGCAAGTTGCGCGCCGATGCCGTGCTGCAACGCAAGCTCTACAGCCTGCCGAACGTCGAGGTGATCACCAGTGCCCTGACCAGCGAAGTGAAGGGCGACGGCCAGAAGGTCACCGGCCTGGTGTACAAGGACCGCAACTCCGAGGAGTTCAAGTCGATCGAGCTGGAAGGCATCTTCGTGCAGATCGGCCTGCTGCCCAACACCGAGTGGCTCAAGGGCAGCGTCGAGCTGTCGCCGCGTGGCGAGATCATCGTCGACGCCCGTGGCGAGACCTCGCTGCCCGGCATCTTCGCCGCCGGCGACGTGACCACGGTGCCGTACAAGCAGATCGTGATCGCCGTGGGCGAGGGCGCCAAGGCTTCGCTGAGCGCCTTCGACCACCTGATCCGGACCTCCGCGCCGGAGTGA MLDANLKTQLKAYLEKVSQPFEIVASLDDSDKSRELLGLLQDIVGLTDKITLKTDGSDARKPSFSLNRPGADIGLRFAGIPMGHEFTSLVLALLQVGGHPSKLDADVIEQVKGIEGTFEFETYFSLSCQNCPDVVQALNLMAVLNPNIRHVAIDGALFQDEVEARQIMSVPSIYLNGEVFGQGRMGVEEILAKIDTGAAARDAEKLTARDAFDVLVVGGGPAGAAAAIYAARKGIRTGVAAERFGGQVLDTMAIENFISVQETEGPKLARALEEHVRHYEVDIMNLQRASKLVPAKNAGELHEVRFESGGSLKAKTLILATGARWREMGVPGEQEYKAKGVCFCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVAHVTLLEFDSKLRADAVLQRKLYSLPNVEVITSALTSEVKGDGQKVTGLVYKDRNSEEFKSIELEGIFVQIGLLPNTEWLKGSVELSPRGEIIVDARGETSLPGIFAAGDVTTVPYKQIVIAVGEGAKASLSAFDHLIRTSAPE Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0141 CDS 160552 161448 - conserved hypothetical protein Class 4 NP_248831.1 15595339 74% similar to putative transcriptional regulator pvdS [Mycobacterium tuberculosis] Hypothetical, unclassified, unknown Unknown[Class 3] ; Cytoplasmic[Class 3] PF03976|PPK2, Polyphosphate kinase 2|30|258|1e-112 COG2326|COG2326, Uncharacterized conserved protein [Function unknown]. ; COG2326|COG2326, Uncharacterized conserved protein [Function unknown]. ; COG2326|COG2326, Uncharacterized conserved protein [Function unknown]. GTGGCCCTGCAGGTCGCCAGTGCGCCCCACGGCAGCAGCGAGGACAGCACCTCGGCGAGCCTGCCGGCGAACTATCCCTATCACACGCGGATGCGCCGCAACGAGTACGAGAAGGCCAAGCACGACCTGCAGATCGAACTGCTCAAGGTGCAGAGCTGGGTGAAGGAGACCGGCCAGCGCGTGGTGGTCCTGTTCGAAGGCCGCGACGCCGCCGGCAAGGGCGGCACCATCAAGCGCTTCATGGAACACCTGAACCCGCGCGGCGCGCGGATCGTAGCCTTGGAGAAACCGTCCTCCCAGGAGCAGGGCCAGTGGTATTTCCAGCGCTACATCCAACATCTGCCCACCGCCGGCGAGATGGTCTTCTTCGACCGCTCCTGGTACAACCGCGCCGGCGTCGAGCGGGTCATGGGCTTCTGTTCGCCGCTGCAATACCTGGAGTTCATGCGCCAGGCGCCGGAGCTGGAGCGCATGCTCACCAACAGCGGCATCCTGCTGTTCAAGTACTGGTTCTCGGTGAGCCGCGAGGAACAACTGCGGCGCTTCATCTCGCGCCGCGACGATCCGCTCAAGCACTGGAAGCTGTCGCCCATCGACATCAAGTCTCTGGACAAGTGGGACGACTACACCGCCGCCAAGCAGGCGATGTTCTTCCATACCGACACCGCCGACGCGCCGTGGACGGTCATCAAGTCCGACGACAAGAAGCGCGCGCGACTCAACTGCATCCGCCACTTCCTGCACTCGCTGGACTACCCGGACAAGGACCGGCGCATCGCCCATGAGCCCGACCCGTTGCTGGTGGGGCCGGCCTCGCGGGTGATCGAGGAGGACGAGAAGGTCTACGCCGAGGCGGCCGCCGCGCCGGGCCACGCGAACCTGGATATCCCGGCCTGA MALQVASAPHGSSEDSTSASLPANYPYHTRMRRNEYEKAKHDLQIELLKVQSWVKETGQRVVVLFEGRDAAGKGGTIKRFMEHLNPRGARIVALEKPSSQEQGQWYFQRYIQHLPTAGEMVFFDRSWYNRAGVERVMGFCSPLQYLEFMRQAPELERMLTNSGILLFKYWFSVSREEQLRRFISRRDDPLKHWKLSPIDIKSLDKWDDYTAAKQAMFFHTDTADAPWTVIKSDDKKRARLNCIRHFLHSLDYPDKDRRIAHEPDPLLVGPASRVIEEDEKVYAEAAAAPGHANLDIPA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0142 CDS 161906 163255 + hypothetical protein Class 4 NP_248832.1 15595340 PMID:97208208 ; PMID:9055410 51% similar to hydroxyatrazine hydrolaseAtzB [Pseudomonas sp. ADP] Putative enzymes Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0006147|guanine catabolic process|IEA ; molecular_function|GO:0008892|guanine deaminase activity|IEA TIGR02967|guan_deamin|guanine deaminase|equivalog|2.3e-23|3.5.4.3|Purines, pyrimidines, nucleosides, and nucleotides|Other PF01979|Amidohydro_1, Amidohydrolase family|55|387|3e-24 COG0402|SsnA, Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]. ; COG0402|SsnA, Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]. ; COG0402|SsnA, Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]. ATGTCCCGCACCTGGATTCGCAATCCCCTCGCCATCTTCACCGCCAACGGTCTCGACGCCGCCGGCGGCCTGGTCGTCGAAGACGGCCGCATCGTCGAGCTGCTCGGCGCCGGCCAACAGCCCGCGCAGCCCTGCGCCAGCCAGTTCGACGCCAGCCGGCACGTGGTGTTGCCGGGGCTGGTCAACACCCATCACCACTTCTACCAGACCCTCACCCGCGCCTGGGCGCCGGTGGTCAACCAGCCGCTGTTCCCCTGGCTGAAGACCCTCTACCCGGTCTGGGCGCGGCTGACCCCGGAGAAACTCGAACTGGCCACCAAGGTGGCGCTGGCCGAGCTGCTGTTGTCCGGGTGTACCACTGCCGCCGACCACCACTACCTGTTTCCCGGCGGCCTCGAACAGGCCATCGACGTGCAGGCCGGGGTGGTCGAGGAACTGGGCATGCGCGCCATGCTCACCCGCGGCTCGATGAGCCTCGGCGAGAAGGACGGCGGCTTGCCGCCGCAGCAGACGGTGCAGGAGGCCGAGACCATCCTCGCCGACAGCGAGCGACTGATCGCCCGCTACCACCAGCGCGGAGACGGTGCCCGGGTGCAGATCGCCCTGGCGCCCTGCTCGCCGTTCTCGGTGACTCCGGAGATCATGCGCGCCAGCGCCGAAGTGGCGGCGCGCCATGACGTACGCCTGCACACCCACCTGGCGGAGACCCTCGACGAGGAAGACTTCTGCCTGCAGCGCTTCGGCCTGCGTACCGTGGACTACCTGGATAGCGTCGGCTGGCTCGGCCCGCGCACCTGGCTGGCCCACGGCATCCACTTCAACGCCGAGGAGATCCGCCGGCTCGGCGAGGCGGGCACCGGTATCTGCCATTGCCCGAGTTCGAACATGCGCCTGGCCTCGGGCATCTGCCCGACCGTGGAGCTGGAGGCGGCCGGCGCGCCGATCGGCCTGGGAGTCGATGGCTCGGCCTCCAACGACGCCTCGAACATGATCCTCGAGGCGCGCCAGGCCCTGTACCTGCAACGCCTGCGCTACGGCGCCGAGCGGATCACCCCGGAACTCGCCCTGGGCTGGGCCACCCGTGGCTCGGCACGCCTGCTCGGGCGCAGCGACATCGGCGAGCTGGCCCCCGGCAAGCAGGCCGACCTGGCCTTGTTCAAGCTCGACGAGCTGCGCTTCTCGGGTAGCCACGACCCGCTCTCGGCGCTGCTGCTGTGCGCTGCCGACCGCGCCGACCGGGTAATGGTCGGCGGCGCCTGGCGAGTGGTCGACGGTGCCGTGGAGGGCCTCGACCTGGCCGCCCTGATCGCCCGCCACCGCGCTGCGGCGAGTGCCCTGATCGCCGGTTGA MSRTWIRNPLAIFTANGLDAAGGLVVEDGRIVELLGAGQQPAQPCASQFDASRHVVLPGLVNTHHHFYQTLTRAWAPVVNQPLFPWLKTLYPVWARLTPEKLELATKVALAELLLSGCTTAADHHYLFPGGLEQAIDVQAGVVEELGMRAMLTRGSMSLGEKDGGLPPQQTVQEAETILADSERLIARYHQRGDGARVQIALAPCSPFSVTPEIMRASAEVAARHDVRLHTHLAETLDEEDFCLQRFGLRTVDYLDSVGWLGPRTWLAHGIHFNAEEIRRLGEAGTGICHCPSSNMRLASGICPTVELEAAGAPIGLGVDGSASNDASNMILEARQALYLQRLRYGAERITPELALGWATRGSARLLGRSDIGELAPGKQADLALFKLDELRFSGSHDPLSALLLCAADRADRVMVGGAWRVVDGAVEGLDLAALIARHRAAASALIAG Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0143 CDS 163363 164415 + nuh purine nucleosidase Nuh Class 1 NP_248833.2 119167454 nucleoside hydrolase Specific function outlined in reference. Nonspecific ribonucleoside hydrolase annotation ID (with class I confidence) implies that there are more reactions catalyzed by this enzyme. PMID:15687295 ; PMID:16503417 60% similar to hypothetical protein YeiK [Escherichia coli] PS01247: Inosine-uridine preferring nucleoside hydrolase family signature ; type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 30) ; type I export signal computationally predicted by Phobius (cleavage after residue 30) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 30) 3.2.2.1 Nucleotide biosynthesis and metabolism Periplasmic[Class 1] ; Unknown[Class 3] biological_process|GO:0009117|nucleotide metabolic process|IDA PF01156|IU_nuc_hydro, Inosine-uridine preferring nucleoside hydrolase|40|349|4e-80 COG1957|URH1, Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism]. ; COG1957|URH1, Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism]. ; COG1957|URH1, Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism]. ATGCCCGCCAGCCTTCCTCTGTCCGCTGCCGAAACGGTGGCGCCGCCATCGCCGCGGACGCTGATCATCGACACCGATCCGGGCGCCGACGATGTGATCGCCCTGCTGTTCGCCATGGCCTCGCCGAAGGAGCTGAAGATCCAGGCGCTGACCACCGTCGCCGGCAACGTGCCGCTGGAAAAGACCGCGCGTAACGCCCGGCTGGCCCGCGAGTGGGGCAAGCGCCCGGATATCCCGGTCTACGCCGGCGCCCCGCGACCGCTGCTGCGCACGCCGATCTACGCCGCCGACGTGCACGGCAGCGAAGGCATCAGCGGCGTCGAGGTGCATGAGCCGAAGCAGCCGCTGGCCGAAGGTAACGCCGTGGACTACCTGATCCGCACCTTGCGTGCGGCGCCGGAGAAGAGCGTGACCCTGGCCATGCTCGGCCCGGAGACCAACCTCGCGCTGGCCCTGACCCAGGCCCCGGACATCGTCAAGGGCGTCCGCGAGATCGTGATCATGGGCGGCGCCCACTTCAACGGCGGCAACATCACCCCGGCCGCCGAATTCAATATCTTCGCCGACCCCCACGCGGCGGAAATCGTGCTCAAGAGCGGGGCGCCGATCACCATGCTGCCGCTCGACGTGACCCACAAGATCCTCACCAGCCCCGAGCGCATCGCCAAGCTGCGCAACCTCGGCAACCAGGCCGGCAAGACCGTCGCCGACATCCTCGACGCCTACGTCCAGTACGACATCAAGTACTACGGCCTGAAGGGCGGCCCGGTGCACGACGCCACGGTGGTCGCCTACCTGCTCAAGCCCTCGCTGTTCAAGGGCAAGCGGATCAACGTGCAGGTCGACAGCCGCGAGGGCATCACCTTCGGCCAGACCGTGGCCGACTGGTACGGCGGCCTCAAGCAGCCGGCCAACGTCGAGTGGATCAACGAGGGCGATGCCCAGGGGTTCTTCGACCTGCTCACCGAGCGTATCGCCCGCCTGCCCTGA MSRAARPCNRFCSLLLGLALLMPASLPLSAAETVAPPSPRTLIIDTDPGADDVIALLFAMASPKELKIQALTTVAGNVPLEKTARNARLAREWGKRPDIPVYAGAPRPLLRTPIYAADVHGSEGISGVEVHEPKQPLAEGNAVDYLIRTLRAAPEKSVTLAMLGPETNLALALTQAPDIVKGVREIVIMGGAHFNGGNITPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIAKLRNLGNQAGKTVADILDAYVQYDIKYYGLKGGPVHDATVVAYLLKPSLFKGKRINVQVDSREGITFGQTVADWYGGLKQPANVEWINEGDAQGFFDLLTERIARLP Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0144 CDS 164443 165069 - hypothetical protein Class 4 NP_248834.1 15595342 PMID:15687295 Manually-identified twin arginine transporter (TAT) motif (MSRSNGSSSRRTFLR) ; type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 35) ; type I export signal computationally predicted by Phobius (cleavage after residue 35) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 35) Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] PF05014|Nuc_deoxyrib_tr, Nucleoside 2-deoxyribosyltransferase|42|191|2e-38 COG3613|COG3613, Nucleoside 2-deoxyribosyltransferase [Nucleotide transport and metabolism]. ; COG3613|COG3613, Nucleoside 2-deoxyribosyltransferase [Nucleotide transport and metabolism]. ; COG3613|COG3613, Nucleoside 2-deoxyribosyltransferase [Nucleotide transport and metabolism]. ATGAGCCGATCCAACGGTTCCAGCAGCCGTCGTACCTTCTTGCGCCTGGCGGCCCTGCTGCTGCCCGCCGGCGCCCTGCTCGGCAGCCTGCCGGGCGTACGCGCCGCGGCCAGACCGCGGAAACTCTATCTGGCCGGTCCCGACGTGTTCCGCGCCGACGCCGTCGCCCACGGCGAAGCGCTCAAGGCACTGTGCGCACGCTACGGCTTCGAAGGCCTCTACCCGCTGGACAACGCGCTGCCGAAACAGCTCGCCGAGCCGCGCGAACAGGCGGCCTGGATCTACCGCGCCAACATCGGCCTGATCGAACGCGCCGACGCGGTGCTGGCCAACCTGAACTTCTTCCGCGGCGCCGAGCCGGACAGCGGCACCGCCTTCGAGGTCGGCTATGCCACCGCCCTCGGCAAGCCGGTCTATGGCTACGTCGACGACGCCGGCAGCTACGCCGAGCGAATCCGCCGGCACGCCCCGGAGCTGATCGGCGAGGATCCGACCCGCGACCGCGACGGCATGACCCTGGAAGAGTTCGGCCTGCCGCTCAACCTGATGCTGGCGGTGCCGGCAACGCTAGTCGTCGGCGACGCCGAGCAGGCCCTGCGCCAACTCGCCAGCCGGCGCCACGGCTGA MSRSNGSSSRRTFLRLAALLLPAGALLGSLPGVRAAARPRKLYLAGPDVFRADAVAHGEALKALCARYGFEGLYPLDNALPKQLAEPREQAAWIYRANIGLIERADAVLANLNFFRGAEPDSGTAFEVGYATALGKPVYGYVDDAGSYAERIRRHAPELIGEDPTRDRDGMTLEEFGLPLNLMLAVPATLVVGDAEQALRQLASRRHG Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0145 CDS 165219 165737 - hypothetical protein Class 4 NP_248835.1 15595343 Hypothetical, unclassified, unknown Unknown[Class 3] ; Cytoplasmic[Class 3] PF05014|Nuc_deoxyrib_tr, Nucleoside 2-deoxyribosyltransferase|4|153|1e-38 COG3613|COG3613, Nucleoside 2-deoxyribosyltransferase [Nucleotide transport and metabolism]. ; COG3613|COG3613, Nucleoside 2-deoxyribosyltransferase [Nucleotide transport and metabolism]. ; COG3613|COG3613, Nucleoside 2-deoxyribosyltransferase [Nucleotide transport and metabolism]. ATGACCGCGATCTACCTGGCCGGGCCGGACGTCTTCCGCCCCGACGCCGAAGCCCATGGCGAAACCCTCAAGGCGCTCTGCGCCGAGTTCGGCTTCGTCGGCCTCTACCCGCTCGACCACGCCCTGCCCGCCGACATCCGCGAGCCAGCCGCACAGGCCGCCTGGATCTACCGCGCCAATGTCGGCCTGATCGAGCGCGCCGACTGCGTGCTGGCCAACCTCGAACCGTTCCGCGGCAGCGAGCCGGACAGCGGCACCGCCTTCGAAGTGGGTTACGCCCTGGCCCTGGGCAAGCCGGTATATGCCTACCTCAGCGATGCCGGCGCCTACGCCGAGCGCCTCGCCCGGCTGGCCCCGGAATGGCTCGGCGAGCACCCCGGCGAGGACCGCGACGGTTGGCAACTGGAGGGTTTCGGCCTGCCATTGAACCTGATGCTGGCGGTGCCTTCGCGGCTGGTCGCCGGCGGCCCGCGCGAGGCCCTGCGACGCCTCGCCGAGGAACTCGGCGGGAACGCCTGA MTAIYLAGPDVFRPDAEAHGETLKALCAEFGFVGLYPLDHALPADIREPAAQAAWIYRANVGLIERADCVLANLEPFRGSEPDSGTAFEVGYALALGKPVYAYLSDAGAYAERLARLAPEWLGEHPGEDRDGWQLEGFGLPLNLMLAVPSRLVAGGPREALRRLAEELGGNA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0146 CDS 165976 167073 + conserved hypothetical protein Class 4 NP_248836.1 15595344 PMID:15687295 63% similar to predicted coding region AF0890 [Archaeoglobus fulgidus] type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 31) ; type I export signal computationally predicted by Phobius (cleavage after residue 31) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 31) Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] PF02608|Bmp, Basic membrane protein|35|317|4e-43 COG1744|Med, Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein [General function prediction only]. ; COG1744|Med, Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein [General function prediction only]. ; COG1744|Med, Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein [General function prediction only]. ATGAAACACCGTCGCACGCAATCCCGCATGTCCGTCCTGCGCCGCCTTGCCGCCGTCCTCGGCCTCGGCGCCTGCGCTCTCGCCGCCGAGGCCGCCGAACCACTGAAGATCGGCTTCGTCTATGTCGGCCCGGTCGGCGACCACGGCTGGACCTACCAGCACGAACTGGGCCGCCGCGAACTGGTGGAGCACTTCGGCGACAAGGTGAAGACCAGCTTCGTCGAGAACGTCGCCGAGGGCGCCGACGCCGAGCGGGTCATCCGCAACCTGGCGAAAGACGGCTACGGCCTGGTCTTCACCACCTCCTTCGGCTACATGAACCCTACCGCCAAGGTGGCCCGGCAGTTTCCCAAGGTGACCTTCGAGCACGCCACCGGCTACAAGCGCGACAGGAACCTCGGCACCTACCTGTCGCGCTCCTACGAGGGACGCTACGTCGGCGGCTTCCTCGCGGCGAAGATGACCCGCAGCCACAAGATCGGCTACATCGCCTCGTTTCCGATTCCCGAGGTGATCCGCGACATCAACGCGATCCAGCTGGCGCTGGACAAATACGACCCGCAGGCCGAACTCAAGGTGATGTGGGTGAGCACCTGGTTCGATCCGGGCAAGGAGGCCGACGCGGCCAACGCGCTGATCGACCAGGGCGTCGACGTGGTGTTCCAGCACACCGATAGCCCGGCGCCGATCCAGGCCGCCGAGCGTCGCGGGGTGTACGCCGTGGGCTACGCCTCGGACATGCAGCACTTCGGTCCGAAGACCGTGCTCACCTCGATCGTCAACGACTGGGGCCCGCACTATATCCGCTCGGCCCAGGCGGTGATGGACGGCACCTGGAAATCCGAGGACTTCTGGGGTGGCCTGGCCGAGAGTACGGTGGTCCTGCCGCTGAACCAGGAGGTGCTGCCGGCGCCGGTGCGGGAAGAGGCGGGCAGGCTGATCGAGTCGATCCGCAGCGGAGCCTTCCACCCCTTCACCGGGCCGATCCGCGACCAGTCCGGCAAGGAGCGTTTCGCCGCCGGCGTCAGCGCGACCAAGGCCGACCTGGCGTCGATGAACTATTACGTGGAAGGCATCAAGGCCGACCTGCCGAAGTGA MKHRRTQSRMSVLRRLAAVLGLGACALAAEAAEPLKIGFVYVGPVGDHGWTYQHELGRRELVEHFGDKVKTSFVENVAEGADAERVIRNLAKDGYGLVFTTSFGYMNPTAKVARQFPKVTFEHATGYKRDRNLGTYLSRSYEGRYVGGFLAAKMTRSHKIGYIASFPIPEVIRDINAIQLALDKYDPQAELKVMWVSTWFDPGKEADAANALIDQGVDVVFQHTDSPAPIQAAERRGVYAVGYASDMQHFGPKTVLTSIVNDWGPHYIRSAQAVMDGTWKSEDFWGGLAESTVVLPLNQEVLPAPVREEAGRLIESIRSGAFHPFTGPIRDQSGKERFAAGVSATKADLASMNYYVEGIKADLPK Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0147 CDS 167146 168108 + probable oxidoreductase Class 3 NP_248837.1 15595345 PMID:90174998 ; PMID:2308852 45% similar to isopenicillin N synthase [Flavobacterium sp.] PS00185: Isopenicillin N synthetase signature 1 ; PF00671: Iron/Ascorbate oxidoreductase family Putative enzymes Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] PF03171|2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily|174|274|7e-22 COG3491|PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only]. ; COG3491|PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only]. ; COG3491|PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only]. TTGGACCGTCTACCCATCATCGACATCGCCCCGCTCTACGGCGCCGACCGTGGCGCCTGGAACGACGTGGCGCGGCGGATCGACCAGGCCTGCCGCGAGTGGGGCTTCTTCTACATCGCCGGACACCCGTTGCCGGCCGCGCGCTTCGAAGCCCTGCTGGCGGCGGCGCGGGAGTTCTTCGCGCTGCCCGTCGAAGAGAAGCTGAAGATCGATATCACCCGTAGCCGCAATCATCGCGGCTATGGCGCGATCGCCACCGAGCAGCTCGACCCGGCGTTGCCCAGCGACTTCAAGGAGACCTTCGACATGGCCCTGCACCTGCCGGCGGAGCATCCCGACGTGCGCGCCGGCAAATCCTTCTACGGGCCCAACCGACACCCCGACCTGCCCGGCTGGGAGGCCCTGCTGGAAGGACACTATGCCGACATGCTGGCGCTGGCCCGTACCGTGCTGCGCGCCCTGGCCATCGCCCTGGGGATCGAGGAGGACTTCTTCGATCGCCGCTTCGAGCAGCCGGTCAGCGTGTTCCGCCTGATCCACTATCCGCCGGCCTCGGCCCGGCAGAGCGCCGACCAGCCCGGCGCCGGCGCGCACACCGACTACGGCTGCGTGACCCTGCTCTACCAGGACGCCGCCGGTGGCCTGCAAGTGCAGAACCGCCAGGGCGAATGGATCGACGCGCCGCCCATCGACGGCACCTTCGTGGTCAACATCGGCGACATGATGGCGCGCTGGAGCAACGACCGTTACCGCTCGACCCCGCACCGGGTGATCAGCCCGCGCGGGGTGCACCGCTACTCCATGCCGTTCTTCGCCGAACCGCACATGGACACCGAGATCCGCTGCCTGCCGGGCTGCTTCGACGCGGACAACCCGCCGAAGTATCCGCCGACCACCTGTGGCGATTGGCTGACCTCGCGCTTCGCGCAGACCTATGCCTATCGGCGCGGCGAAACGGCCTGA MDRLPIIDIAPLYGADRGAWNDVARRIDQACREWGFFYIAGHPLPAARFEALLAAAREFFALPVEEKLKIDITRSRNHRGYGAIATEQLDPALPSDFKETFDMALHLPAEHPDVRAGKSFYGPNRHPDLPGWEALLEGHYADMLALARTVLRALAIALGIEEDFFDRRFEQPVSVFRLIHYPPASARQSADQPGAGAHTDYGCVTLLYQDAAGGLQVQNRQGEWIDAPPIDGTFVVNIGDMMARWSNDRYRSTPHRVISPRGVHRYSMPFFAEPHMDTEIRCLPGCFDADNPPKYPPTTCGDWLTSRFAQTYAYRRGETA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0148 CDS 168213 169163 + probable adenosine deaminase Class 3 NP_248838.1 15595346 add PMID:91152042 ; PMID:1998686 62% similar to adenosine deaminase (putative) [Saccharomyces cerevisiae] ; 46% similar to adenosine deaminase [Escherichia coli] PS00485: Adenosine and AMP deaminase signature salvage pathways of adenine, hypoxanthine, and their nucleosides [PseudoCyc] Nucleotide biosynthesis and metabolism Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0043101|purine salvage|IEA ; molecular_function|GO:0004000|adenosine deaminase activity|IEA TIGR01430|aden_deam|adenosine deaminase|equivalog|2.9e-134|3.5.4.4|No Data|No Data PF00962|A_deaminase, Adenosine/AMP deaminase|8|310|4e-60 COG1816|Add, Adenosine deaminase [Nucleotide transport and metabolism]. ; COG1816|Add, Adenosine deaminase [Nucleotide transport and metabolism]. ; COG1816|Add, Adenosine deaminase [Nucleotide transport and metabolism]. ATGTACGAATGGCTCAACGCCTTGCCCAAGGCCGAACTGCACCTGCACCTGGAAGGTACCCTGGAGCCGGAGCTGCTGTTCGCCCTCGCCGAGCGCAACCGCATCGCCCTGCCCTGGAACGACGTCGAGACCCTGCGCAAGGCCTACGCCTTCAACAACCTGCAGGAATTCCTCGACCTCTACTACGCCGGCGCCGACGTGCTGCGCACCGAGCAGGACTTCTACGACCTGACCTGGGCCTACCTGCAGAAGTGCAAGGCGCAGAACGTCGTCCACGTCGAGCCGTTCTTCGACCCGCAGACCCACACCGATCGCGGCATTCCCTTCGAGGTGGTGCTCGCCGGCATCCGCGCCGCGCTACGGGACGGCGAGAAGCTGCTGGGCATCCGCCATGGGCTGATCCTCAGCTTCCTCCGCCACCTCAGCGAGGAACAGGCGCAGAAAACCCTCGACCAGGCGCTGCCGTTCCGCGACGCCTTCATCGCCGTCGGCCTCGACAGCTCGGAAGTAGGGCATCCGCCGAGCAAGTTCCAGCGGGTCTTCGACCGGGCCCGCAGCGAAGGCTTCCTCACCGTCGCCCATGCCGGCGAGGAGGGGCCGCCCGAGTACATATGGGAAGCCCTCGACCTGCTCAAGGTCGAGCGCATCGACCACGGCGTACGCGCCTTCGAGGACGAGCGGCTGATGCGGCGGCTGATCGACGAACAGATCCCGCTGACCGTCTGCCCGCTGTCCAACACCAAGCTCTGCGTGTTCGACGACATGAGCCAGCACACCATCCTCGACATGCTCGAACGCGGCGTGAAGGTGACGGTGAACTCCGATGACCCGGCCTACTTCGGCGGCTATGTCACCGAGAACTTCCATGCCTTGCAGCAGAGCCTGGGAATGACCGAGGAGCAGGCCAGGCGCCTGGCGCAGAACAGCCTGGATGCGCGCCTGGTGAAGTGA MYEWLNALPKAELHLHLEGTLEPELLFALAERNRIALPWNDVETLRKAYAFNNLQEFLDLYYAGADVLRTEQDFYDLTWAYLQKCKAQNVVHVEPFFDPQTHTDRGIPFEVVLAGIRAALRDGEKLLGIRHGLILSFLRHLSEEQAQKTLDQALPFRDAFIAVGLDSSEVGHPPSKFQRVFDRARSEGFLTVAHAGEEGPPEYIWEALDLLKVERIDHGVRAFEDERLMRRLIDEQIPLTVCPLSNTKLCVFDDMSQHTILDMLERGVKVTVNSDDPAYFGGYVTENFHALQQSLGMTEEQARRLAQNSLDARLVK Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0149 CDS 169361 169906 + probable sigma-70 factor, ECF subfamily Class 3 NP_248839.1 15595347 48% similar to regulatory protein PvdS [Pseudomonas aeruginosa] PS01063: Sigma-70 factors ECF subfamily proteins Transcriptional regulators Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] TIGR02937|sigma70-ECF|RNA polymerase sigma factor, sigma-70 family|superfamily|1.9e-36||No Data|No Data PF08281|Sigma70_r4_2, Sigma-70, region 4|112|164|9e-10 COG1595|RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]. ; COG1595|RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]. ; COG1595|RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]. TTGCCGGCAGACGGCGAGGCGGCGCGCCGCGCGGATCTCCTCAAGGCCTTCCTGGCCCAGCGCCAGCGCATGGAAAGCCTGGTCAGCCGCTGGGTCGGCTGCCGGGCGACCGCCGCCGACCTGGTCCAGGAACTGTTCCTGCGCTTCTGGCGGCGCCCGGCCGCCCCGGTGGAGGAGCTTGGCAGCTACCTCCTGCGCAGCGCGCGCAACCTGGCCATCGACCACTTGCGTGGCGAAGGATCGCGGCAACGGCAACTGGACGATTGGCTGCCGGAGCAGCGCCAGGGCGAGCCGGTCGGTCCCGAGCAGGCGCTCGAGGCCGGCGACCAGTGGCGCCGGGTCGAGGCCGCCTTGCGCGGCCTGCCCGAGCGGACCCGGCGGATTTTCCTGCTCAATCGCATCCACGGCCGCACCTACGCGGAGATCGCCCAGGCCATGCAGCTTTCCCAAAGCGCCGTGGAAAAACATATGATGCGCGCCCTCGACGCCTGCAAGGCGAGCCTGGCCGGCCCGGCCGGCGAGCAGGCAAGGAGCGCCCAGCCATGA MPADGEAARRADLLKAFLAQRQRMESLVSRWVGCRATAADLVQELFLRFWRRPAAPVEELGSYLLRSARNLAIDHLRGEGSRQRQLDDWLPEQRQGEPVGPEQALEAGDQWRRVEAALRGLPERTRRIFLLNRIHGRTYAEIAQAMQLSQSAVEKHMMRALDACKASLAGPAGEQARSAQP Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0150 CDS 169903 170898 + probable transmembrane sensor Class 3 NP_248840.1 15595348 PMID:91072220 ; PMID:15687295 ; PMID:2254251 45% similar to regulatory protein PupR [Pseudomonas putida] 1 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Membrane proteins ; Transcriptional regulators Unknown[Class 3] ; Cytoplasmic Membrane[Class 3] PF04773|FecR, FecR protein|124|216|9e-24 COG3712|FecR, Fe2+-dicitrate sensor, membrane component [Inorganic ion transport and metabolism / Signal transduction mechanisms]. ; COG3712|FecR, Fe2+-dicitrate sensor, membrane component [Inorganic ion transport and metabolism / Signal transduction mechanisms]. ; COG3712|FecR, Fe2+-dicitrate sensor, membrane component [Inorganic ion transport and metabolism / Signal transduction mechanisms]. ATGACTCGACCCGATAGCGACGCCGCGCCCTACGAGCCCGTCCTCGAGCAGACCGCCCAGGCCTGGCTGGTGCGCCTGCGCGGTACGCCGGATGCGGCGACCCGGCGGGCCTTCGAGGACTGGCTGGCGCAGCGGCCGGCGCATGCCGAGGCCTATGCCCGCGCCGAGGCGCTCTGGCGCCTGACGGAAATACCGGCGAGCCGCCTGGCCATCGAAGAGGCCGATGCCCTGGAAGCCTACCTGCGGCCGCGCCGAGCGTCGCGCAACCCGCGGCGCTGGGCCTACCCGCTGGCCAGCGTCGCCTGCCTGCTGGCGATGCTTTGGCTGGGCGGCTGGTGGCAGCCCGGCGACTGGCTGCAGGACTGGCGTGCCGACTATGTCGCCGCGCCGGGACAGGTCGCCGAATGGAAGCTGGCCGATGGCTCCTACCTGAGCCTGGACGCCGGCAGCGCGGTGCGCGTGCGTATCGACGGCGGCCAGCGGCGGGTCGAACTGCTGCGCGGCGCCGCCGCGTTGCGGGTGAAGCGCGACGCGCTGCCATTCGTGGTCGAGGCCGGCGAAGGTCGGGCGCGGGTACTGGGCACCGAGTTCGAGGTCCGTCGCGGCGCCGGGGCGACCCGCGTCACCGTGTTGCAAGGGCGGGTCGCGGTGAGCGCCGGCACCGGTGCGGGCGCCGCCGAGGAAGTGCTGGGCGCCGGCCAGCAGGTCGGCTTCGCCGACGGCAAGCTGGGCCGGCCCGTGGCCATCGACGCCGCCGCCGCGCTGGCCTGGCGCCAGGGTTGGCTGAGCTTCTACCGGCGGCCGCTGGCGGAAGTGCTCGACGAACTCGCTCGCTACTACCCCGGACGCATTCTCCTGCTCGACGACGCGCTCGGTCGCCAGCCGGTCAGCGGCAGCTTCCGCAGCGATGATCCCGAAGCCGCGCTGAAGTCGCTGCAGGCGGTGCTCGGCTATCGCCAGCAGATCCTGTTCGGACGCCTGGTGGTGATTCGCTGA MTRPDSDAAPYEPVLEQTAQAWLVRLRGTPDAATRRAFEDWLAQRPAHAEAYARAEALWRLTEIPASRLAIEEADALEAYLRPRRASRNPRRWAYPLASVACLLAMLWLGGWWQPGDWLQDWRADYVAAPGQVAEWKLADGSYLSLDAGSAVRVRIDGGQRRVELLRGAAALRVKRDALPFVVEAGEGRARVLGTEFEVRRGAGATRVTVLQGRVAVSAGTGAGAAEEVLGAGQQVGFADGKLGRPVAIDAAAALAWRQGWLSFYRRPLAEVLDELARYYPGRILLLDDALGRQPVSGSFRSDDPEAALKSLQAVLGYRQQILFGRLVVIR Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0151 CDS 171047 173434 + probable TonB-dependent receptor Class 3 NP_248841.1 15595349 PMID:15687295 43% similar to ferric-pseudobactin receptor PupB [Pseudomonas putida] PF00593: TonB dependent receptor C-terminal region ; type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 28) ; type I export signal computationally predicted by Phobius (cleavage after residue 28) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 28) Transport of small molecules Outer Membrane[Class 2] ; Outer Membrane[Class 3] ; Outer Membrane[Class 3] biological_process|GO:0015892|siderophore-iron transport|IEA ; cellular_component|GO:0019867|outer membrane|IEA ; molecular_function|GO:0015343|siderophore-iron transmembrane transporter activity|IEA TIGR01783|TonB-siderophor|TonB-dependent siderophore receptor|subfamily|4.5e-106||Transport and binding proteins | Transport and binding proteins|Cations and iron carrying compounds | Porins PF00593|TonB_dep_Rec, TonB dependent receptor|552|795|1e-34 COG1629|CirA, Outer membrane receptor proteins, mostly Fe transport [Inorganic ion transport and metabolism]. ; COG1629|CirA, Outer membrane receptor proteins, mostly Fe transport [Inorganic ion transport and metabolism]. ; COG1629|CirA, Outer membrane receptor proteins, mostly Fe transport [Inorganic ion transport and metabolism]. ATGACCCCGTTCCCGCGCTTCGCCCTGCGTACTCTCCCCGCCCTGTTCCTCAGCCTCGGCTGTCTCGCCGCCACCGTGCAGGCCGCCGAGGCGGTTCGCTACCGCTTCAGCCAGGCTGCCGCGCCGCTGGCCCAGGCGCTCAACGCGTTCAGCCGGGCCAGCGGGCAGACGCTGCTCTACACCGCCGAGCTGCCGCCGCAGGCGACCGCTCCGGCATTGCACGGTTCGCTGGTCGCGGAGGAGGCGCTGCAACGCCTGCTGCAGGGCAGCGGCCTGCGCGCGCGGCGGATCGACGAGCGCACCCTGACCCTGGAACCGATCCCCGCCAGCGGCGCGCTCGACCTCGATGCCACGACGGTCTCCGCCGCCGCCCCGGCGCAGGGCTACCGGCCGGCGGCCAACGCCTCGATCAGCCGCGGCGATGCGCCGGTACTGGAAATCCCCCAGGCGATCAGCGTGGTCCCGGCACAGGCGCTGCAGGACCAGCGCCCGCGCAACCTTGACGACGCGCTGGGCAACATCAGCGGCATCACCCAGGCCAACACCCTCGGCGGTACCCAGGACGCGGTGATGAAGCGCGGCTTCGGCGACAACCGCGACGGCTCGATCATGCGCGACGGCATGCCCTCGGTGCAGGGCCGCAATTTCACCGCCACCGCCGACCACGTCGAGGTGCTGAAGGGGCCAGCATCCCTGCTCTATGGCATCCAGGATCCGGGCGGGGTGGTCAACGTGGTGAGCAAGAAGCCACAACTGCAACAAGCCAACGCCCTGACCCTGCGTGGCTCGGCCTACGCCCACGGGCGCAACGGCAGCGGCGGCCAGCTCGACTCCACCGGCCCGCTGGGCGACAGCGGACTGGCCTACCGGATGATCCTCGATCATGAGGACGAGGATTACTGGCGCGACTTCGGCAAGAGTCGCGAGACGCTGGTGGCGCCCTCGCTGGCCTGGTACGGCGAGGACACGACGGTCAACCTGAGCTACGAGCACCGCGAGTTCACCACGCCGTTCGACCGTGGTACGGCCATCGACCCGCGTACCAACCGCCCGCTGGACATCCCGCGCAGCCGGCGCCTGGACGAGCCCTTCAACATCACCGAGGGCCGTTCCGAGCTGACCCGCCTGGATCTCGAACGGCAGCTCGACGACACCTGGAAGGCCCACTTCGGCTACGGCTACAGTCGCGAGACCTACGACGACAACCAGGCCCGGGTGATGGCCGTGAATGCCGACGGCACCCTGACCCGGCGCATGGACGGCACCCACGGCGCGGTCAGCAGCGACAGCTTCACCACCCTCGGCCTGAGCGGAACGCTGCAACTGGCCGGGATGCAACATGACCTGCAATTCGGCATGGACCACGAGAAGCGCAAGATCTTCCGCGCCGACCTGCTGCGCGACAGCAAGACCAGCCGCTTCGACTACCTCGACCCGGTCTATGGCCAGGTGGTGCCGTCGACCCGGGTGGTCGCCGGCGACAGCGACCAGACCGACAAGCTGCGCAGCGACTCGCTGTACTTCCAGGACTCGATCCACCTGGACGAACGCTGGATCCTGGTCGGCGGCGCGCGCTACCAGATCTACGACCAGCTCGCCGGGCGCGGCCGGCCGTTCAACGCCAACACCGATATCAACGGGCAGAAATGGGTGCCGCGCGGCGGCCTGGTCTACCGCCTGAGCGACGAGGTTTCGCTGTACGGCAGCTACATGCGCTCGTTCAAGCCGAACTCGACCATCGCCCCGCTGAGCACCGGCGAGACCATCGATTCGGCGATCCTGCCGGAGGAGGCGACCTCCTGGGAGCTGGGCGCCAAGCTGGATGTGCCGGGGCGTCTCAGCGGCACCCTGGCGCTGTTCGACATTCGCAAGAAGAACGTGCTGGTCAACGAACTCGACGGTGCCGGCAACAGCAGCGTGCGCGCCGCCGGCCGGGTCCGCTCGCGCGGCCTGGAGCTGGACCTCACCGGCCAGCTCAGCGAACGCTGGAGCCTGATCGGCAGCTACGCCTGGCTCGCCGCGGAAGTCACCGAGGACCCGACCCTGGAGGGCAAGCGCCTGCAGAACGTGGCGCGCAACACCGCGTCGCTGTCGGCGGTCTACGAACTCGGCCAGCTCTTCGGCGGCGACCGCCTGCGCCTGGGCGGCGGCGCGCGCTACGTCGGCAAGCGCCCGGGCGACCCGGCCAATTCCTTCGACCTGCCGTCCTACACCGTGGCCGATGCCTTCGCCAGCTACGACACCCGCTTCGGCGGGCACGGCGTGAAGTTCCAGCTCAACGTGAAGAACCTGTTCGACCGCACCTACTACCCGTCCAGTGCCAATCGACTGTACGTGGCGATGGGCGAGCCCCGGCAGTTCCAGGTGTCGACGACGGTGGAGTTCTGA MTPFPRFALRTLPALFLSLGCLAATVQAAEAVRYRFSQAAAPLAQALNAFSRASGQTLLYTAELPPQATAPALHGSLVAEEALQRLLQGSGLRARRIDERTLTLEPIPASGALDLDATTVSAAAPAQGYRPAANASISRGDAPVLEIPQAISVVPAQALQDQRPRNLDDALGNISGITQANTLGGTQDAVMKRGFGDNRDGSIMRDGMPSVQGRNFTATADHVEVLKGPASLLYGIQDPGGVVNVVSKKPQLQQANALTLRGSAYAHGRNGSGGQLDSTGPLGDSGLAYRMILDHEDEDYWRDFGKSRETLVAPSLAWYGEDTTVNLSYEHREFTTPFDRGTAIDPRTNRPLDIPRSRRLDEPFNITEGRSELTRLDLERQLDDTWKAHFGYGYSRETYDDNQARVMAVNADGTLTRRMDGTHGAVSSDSFTTLGLSGTLQLAGMQHDLQFGMDHEKRKIFRADLLRDSKTSRFDYLDPVYGQVVPSTRVVAGDSDQTDKLRSDSLYFQDSIHLDERWILVGGARYQIYDQLAGRGRPFNANTDINGQKWVPRGGLVYRLSDEVSLYGSYMRSFKPNSTIAPLSTGETIDSAILPEEATSWELGAKLDVPGRLSGTLALFDIRKKNVLVNELDGAGNSSVRAAGRVRSRGLELDLTGQLSERWSLIGSYAWLAAEVTEDPTLEGKRLQNVARNTASLSAVYELGQLFGGDRLRLGGGARYVGKRPGDPANSFDLPSYTVADAFASYDTRFGGHGVKFQLNVKNLFDRTYYPSSANRLYVAMGEPRQFQVSTTVEF Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0152 CDS 173811 174638 + pcaQ transcriptional regulator PcaQ Class 2 NP_248842.1 15595350 PMID:96125256 ; PMID:95325324 ; PMID:7601847 ; PMID:8550427 56% similar to regulatory protein PcaQ [Agrobacterium tumefaciens] PS00044: Bacterial regulatory protein, LysR family signature Aromatic compound catabolism [PseudoCAP] Carbon compound catabolism ; Transcriptional regulators Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0015978|carbon utilization by utilization of organic compounds|ISS ; biological_process|GO:0019619|protocatechuate catabolic process|IEA ; biological_process|GO:0044248|cellular catabolic process|ISS ; biological_process|GO:0045893|positive regulation of transcription, DNA-dependent|IEA ; molecular_function|GO:0016563|transcription activator activity|IEA ; molecular_function|GO:0030528|transcription regulator activity|ISS TIGR02424|TF_pcaQ|pca operon transcription factor PcaQ|equivalog|1.1e-122||Energy metabolism | Regulatory functions|Other | DNA interactions PF03466|LysR_substrate, LysR substrate binding domain|67|272|3e-27 COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription]. GTGGCGGTGTCGCAGCCGGCGATCTCCAAGACCCTCAAGGAACTGGAGGAAATCCTCGGCGCGCGCCTGTTCGAACGGAGCAAGGCCGGCGCCGAGCTGACCGAGGCGGGCGTGACCTTCCTGCGCTATGCCGGCCCCTGCGTGCAGGCCCTGCGCGACGGGGTGAACACCCTGCGCGGCCACGAGGCGCAGGTCGAGACGGTGCGGGTCGGCGTGCTGTCGACGGTGGAGAGCCTGGTGGTGCCCGAGGTGATCCGGCGCCTGCACCGGCGCCACGGTGCGCTGGTGGTCAGCGTCGCCACCGGACCCAGCGCCTACCTGCTGGCGCAACTGAAGGTCGGCGAGCTGGACCTGGTGGTCGGGCGGATGACCGATAGCCCGGACATCCAGGGCCTGACCTTCGAGCACCTGTACAGCGAGTCGATGATGCTGGTGGTGCGTCCCGGCCACCCCTTGCTCGCCGCGCCCCTCGGCGACCTGCAGCGGCTGGCCGAATTCCCACTGGTGCTGCCGCTGGCCGGCACCACCATCCGCCGCCACGCCGACAGCCTGTTCGTGCAGTGGGGCATCGCGCTCGCCGGACAGCGCCTGGAAACCCTCTCGCCGACCCTCAGCCGCAGCTATGTGTTGCGCAGCGAGGCGATCTGGGTGGCGCCGCGCGATGCCGTGCGCCTGGACGTCGGCAACGGCGAGCTGGCCGAGCTGGACCTGGGTATCCGCGAACCGGGCGGTTCGGTCGGGCTGTGCCACAACGCGGCCTTGCCGTTGCCGCTGGGGGCGCAATGGTTCAGCGCGGTGTTGCGCGAGGTGGCCGCCGAGTTGCACTGA MAVSQPAISKTLKELEEILGARLFERSKAGAELTEAGVTFLRYAGPCVQALRDGVNTLRGHEAQVETVRVGVLSTVESLVVPEVIRRLHRRHGALVVSVATGPSAYLLAQLKVGELDLVVGRMTDSPDIQGLTFEHLYSESMMLVVRPGHPLLAAPLGDLQRLAEFPLVLPLAGTTIRRHADSLFVQWGIALAGQRLETLSPTLSRSYVLRSEAIWVAPRDAVRLDVGNGELAELDLGIREPGGSVGLCHNAALPLPLGAQWFSAVLREVAAELH Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0153 CDS 174773 175492 + pcaH protocatechuate 3,4-dioxygenase, beta subunit Class 2 NP_248843.1 15595351 PMID:89057125 ; PMID:3194022 90% similar to protocatechuate 3,4-dioxygenase, beta subunit [Pseudomonas putida] PS00083: Intradiol ring-cleavage dioxygenases proteins Aromatic compound catabolism [PseudoCAP] ; protocatechuate degradation, ortho-cleavage [PseudoCyc] ; gallate degradation I [PseudoCyc] 1.13.11.3 Carbon compound catabolism Unknown[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0015978|carbon utilization by utilization of organic compounds|ISS ; biological_process|GO:0044248|cellular catabolic process|ISS ; biological_process|GO:0046278|protocatechuate metabolic process|IEA ; molecular_function|GO:0018578|protocatechuate 3,4-dioxygenase activity|IEA TIGR02422|protocat_beta|protocatechuate 3,4-dioxygenase, beta subunit|equivalog|3e-163|1.13.11.3|Energy metabolism|Other PF00775|Dioxygenase_C, Dioxygenase|60|231|1e-41 COG3485|PcaH, Protocatechuate 3,4-dioxygenase beta subunit [Secondary metabolites biosynthesis, transport, and catabolism]. ; COG3485|PcaH, Protocatechuate 3,4-dioxygenase beta subunit [Secondary metabolites biosynthesis, transport, and catabolism]. ; COG3485|PcaH, Protocatechuate 3,4-dioxygenase beta subunit [Secondary metabolites biosynthesis, transport, and catabolism]. ATGCACGACGCCGAAAGCCGTCGTTTCGTCATCCGTGACCGAAACTGGCACCCCAAAGCCTTGACCCCCGACTACAAGACCTCCGTGCCGCGCTCGCCGAGCCAGGCGCTGGTGAGCATCCCGCAATCGCTCTCGGAAACCAGCGGGCCGGACTTCTCCCACCTCAGGCTCGGCCGCCACGACAACGACCTGCTGCTCAACTTCGACCACGGCGGCCTGCCCCAGGGCGAGCGCATCATCATGTTCGGCCGGGTCTTCGACCAGTACGGCAAGCCGGTCCCGCACACCCTGGTGGAGATGTGGCAGGCCAACGCCGGCGGGCGCTACCGGCACAAGAACGACCGCTACCTGGCGCCGCTCGACCCGAACTTCGGCGGCGTCGGCCGGACCCTCACCGACAGCGAGGGCCACTATTACTTCCGCACCATCAAGCCCGGGCCCTATCCCTGGCGCAACGGCCCCAACGACTGGCGCCCGGCGCACATCCACGTGTCTGTCAGCGGCCCGGCGATCGCCGCGCGGCTGGTCACCCAGATGTACTTCGAGGGCGACCCGCTGATCCCCAAGTGCCCGATCATCCGCACCCTTGCCGACCCGGAGGCGGCGCAGAGCCTGATCGGCCGGCTCGACATGAGCATGGCCAACCCGATGGATTGCCTGGCCTACCGCTTCGACATCGTCCTGCGCGGGCAGCGTAAGACCTTCTTCGAGAACGCCTGA MHDAESRRFVIRDRNWHPKALTPDYKTSVPRSPSQALVSIPQSLSETSGPDFSHLRLGRHDNDLLLNFDHGGLPQGERIIMFGRVFDQYGKPVPHTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRTLTDSEGHYYFRTIKPGPYPWRNGPNDWRPAHIHVSVSGPAIAARLVTQMYFEGDPLIPKCPIIRTLADPEAAQSLIGRLDMSMANPMDCLAYRFDIVLRGQRKTFFENA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0154 CDS 175503 176108 + pcaG protocatechuate 3,4-dioxygenase, alpha subunit Class 2 NP_248844.1 15595352 PMID:97400461 ; PMID:9254600 87% similar to protocatechuate 3,4-dioxygenase, alpha subunit [Pseudomonas putida] PS00083: Intradiol ring-cleavage dioxygenases proteins Aromatic compound catabolism [PseudoCAP] ; protocatechuate degradation, ortho-cleavage [PseudoCyc] ; gallate degradation I [PseudoCyc] 1.13.11.3 Carbon compound catabolism Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0015978|carbon utilization by utilization of organic compounds|ISS ; biological_process|GO:0044248|cellular catabolic process|ISS ; biological_process|GO:0046278|protocatechuate metabolic process|IEA ; molecular_function|GO:0018578|protocatechuate 3,4-dioxygenase activity|IEA TIGR02423|protocat_alph|protocatechuate 3,4-dioxygenase, alpha subunit|equivalog|3e-117|1.13.11.3|Energy metabolism|Other PF00775|Dioxygenase_C, Dioxygenase|42|147|2e-10 COG3485|PcaH, Protocatechuate 3,4-dioxygenase beta subunit [Secondary metabolites biosynthesis, transport, and catabolism]. ; COG3485|PcaH, Protocatechuate 3,4-dioxygenase beta subunit [Secondary metabolites biosynthesis, transport, and catabolism]. ; COG3485|PcaH, Protocatechuate 3,4-dioxygenase beta subunit [Secondary metabolites biosynthesis, transport, and catabolism]. ATGAGCCACGAACTGCTGCGGGAAACCCCTTCCCAGACCGCCGGTCCCTATGTCCACATCGGCCTGGCGCTGGCCGCCGCCGGCAACCCGACCCGTGACCTGGAGATCTGGAACCGCATGGCCCGCGAAGGCGCGCGGGGCCAGCACATCCTCCTGCTCGGCCACGTCTACGACGGCAACGGCCACCTGGTGCGCGACTCGTTCCTGGAGTTCTGGCAGGCCGACAGCGAAGGCCGCTACCAGGAGCGCTACGATCCGGAGCGTCCGTTCAACAGCTTCGGCCGCACCGCCACCACCTTCGATGCCGGCGAGTGGACCCTGCACACGGTCAAGCCGGGGGTGGTGCGTAACGCCCAGGGCGTGCCGATGGCGCCGCACATCAACGTCTCGCTGTTCGCCCGCGGCATCAACATCCACTTGCAGACCCGGCTGTACTTCGATGACGAGACCGAGGCCAACGCCGCCTGTCCGGTGCTCAACCTGATCGAGCAGGCGCCGCGTCGCGACACCCTGCTCGCGCAGCGCTGCGAAGTGGACGGACAGCTCGCCTACCGTTTCGACATCCGCATCCAGGGCGACAACGAGACGGTGTTCTTCGACTTCTAG MSHELLRETPSQTAGPYVHIGLALAAAGNPTRDLEIWNRMAREGARGQHILLLGHVYDGNGHLVRDSFLEFWQADSEGRYQERYDPERPFNSFGRTATTFDAGEWTLHTVKPGVVRNAQGVPMAPHINVSLFARGINIHLQTRLYFDDETEANAACPVLNLIEQAPRRDTLLAQRCEVDGQLAYRFDIRIQGDNETVFFDF Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0155 CDS 176315 177154 + pcaR transcriptional regulator PcaR Class 2 NP_248845.1 15595353 PMID:94364957 ; PMID:8083169 88% similar to regulatory protein PcaR [Pseudomonas putida] PS01051: Bacterial regulatory proteins, iclR family proteins Aromatic compound catabolism [PseudoCAP] Carbon compound catabolism ; Transcriptional regulators Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0006355|regulation of transcription, DNA-dependent|ISS ; biological_process|GO:0015978|carbon utilization by utilization of organic compounds|ISS ; biological_process|GO:0044248|cellular catabolic process|ISS ; molecular_function|GO:0030528|transcription regulator activity|ISS TIGR02431|pcaR_pcaU|beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family|subfamily|3e-142||Regulatory functions|DNA interactions PF01614|IclR, Bacterial transcriptional regulator|150|274|3e-32 COG1414|IclR, Transcriptional regulator [Transcription]. ; COG1414|IclR, Transcriptional regulator [Transcription]. ; COG1414|IclR, Transcriptional regulator [Transcription]. ATGAGCGAACTCCCGGAACACCCCGCCACCCTGGCGCCGCCGACCGTCCTTTCGCCGGCCAAGCGCATCGAGGCCTTCACCGGCGATCCCAACTTCATGACCTCGCTGGCCCGTGGCCTGGCGGTGATCCATGCGTTCCAGGAGCGCAAGCGGCACCTGACCATCGCCCAGATCAGCCACCGCACCGAGATACCCCGCGCCGCCGTGCGTCGCTGCCTGCACACGCTGATGCAGCTTGGCTACGCCACCACCGACGGGCGCACCTACTCGCTGTTGCCGAAGGTGCTCACCCTCGGCCACGCCTACCTGTCGTCGACGCCGCTGGCGATCACTGCGCAGCCGATCCTCGACCGCCTCAGCGAACAGCTCCACGAAGCCTGCTCGATGGCCACCCTGGAGGGCGACGACGTGCTCTACATCGCCCGTTCGGCCACTCCCCAGCGGCTGATTTCGGTGGACCTCAACGTCGGCAGCCGGCTGCCCGCCTATTGCACCTCGATGGGCCGCATCCTCCTCGCCGCGCTGGACGACGACGCGCTGCACGCCTACTTCGGCGGAGTGGAGATGCAGGCCAAGACCAGCCGTACCCTGTATACCCCCGAGACCCTGCTGCCGTGCCTGGTGGAGATTCGTCGCCAGGGCTGGTGCATCGTCGACCAGGAACTGGAAGTCGGCCTGCGCTCGCTGGCGGTGCCGGTACGCGACTCCGCCGGCCATGTGCTCGCCGCGCTGAACGTCGGCACCCATGCCGGGCGGGTCTCCCGCGCCGAACTGGAAAGCCGTTTCCTGCCGTTGCTGCTGGAGGCCAGCCGCGAGCTGAGCGCGCGCCTGTTCACCTGA MSELPEHPATLAPPTVLSPAKRIEAFTGDPNFMTSLARGLAVIHAFQERKRHLTIAQISHRTEIPRAAVRRCLHTLMQLGYATTDGRTYSLLPKVLTLGHAYLSSTPLAITAQPILDRLSEQLHEACSMATLEGDDVLYIARSATPQRLISVDLNVGSRLPAYCTSMGRILLAALDDDALHAYFGGVEMQAKTSRTLYTPETLLPCLVEIRRQGWCIVDQELEVGLRSLAVPVRDSAGHVLAALNVGTHAGRVSRAELESRFLPLLLEASRELSARLFT Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0156 CDS 177307 178458 + triA Resistance-Nodulation-Cell Division (RND) triclosan efflux membrane fusion protein, TriA Class 1 NP_248846.1 15595354 probable RND efflux membrane fusion protein precursor PMID:15687295 ; PMID:17720796 45% similar to acriflavine resistance protein AcrE [Escherichia coli] PSORT: Lipoprotein Possible modific. site: 30 CRend: 10 Sequence Pattern: CGAE ; Type II (lipoprotein) export signal predicted by LipoP (cleavage after residue 30) Membrane proteins ; Antibiotic resistance and susceptibility Unknown (This protein may have multiple localization sites)[Class 3] ; Unknown (This protein may have multiple localization sites)[Class 3] biological_process|GO:0006810|transport|IEA ; molecular_function|GO:0005215|transporter activity|IEA TIGR01730|RND_mfp|efflux transporter, RND family, MFP subunit|subfamily|2.3e-64||Transport and binding proteins|Unknown substrate PF00529|HlyD, HlyD family secretion protein|68|203|7e-12 COG0845|AcrA, Membrane-fusion protein [Cell envelope biogenesis, outer membrane]. ; COG0845|AcrA, Membrane-fusion protein [Cell envelope biogenesis, outer membrane]. ; COG0845|AcrA, Membrane-fusion protein [Cell envelope biogenesis, outer membrane]. ATGTCAGACGCCAGAGGCGCTTTTCATTCCAAAGGTCGCTGGTCGCGGATGGCGCTGCCCGCCATCCTGTGCGCCGGCCTGCTTGTCGGTTGCGGCGCCGAGCCGCCCGCCGAGGAACACGTCCGTGTGCTGGCGCAGACGGTGAAGATGGCCGAGTTCGCCTCGGCCACCTCGATCACCGGCGACATCCAGGCACGGGTACAGGCCGACCAGTCGTTCCGTGTCGGCGGCAAGATCGTCGAGCGCCTGGTCGATGTCGGCGACCACGTCGCGGCTGGCCAGGTGCTGGCGCGGCTCGACCCGCAGGACCAGCGCAGCAACGTGGAGAACGCCCAGGCGGCGGTCGCCGCGCAGCAGGCGCAGTCGAAGCTCGCCGACCTCAACTACCAGCGGCAGAAGGCGCTGCTGCCCAAGGGCTACACCAGCCAGAGCGAGTACGACCAGGCGCTGGCCTCGGTGCGCAGCGCGCAGAGTTCGCTGAAGGCCGCCCAGGCGCAGTTGGCCAACGCCCGCGACCTGCTTTCCTATACCGAGCTGCGTGCCTCCGACGCCGGGGTCATCACCGCCCGCCAGGCCGAGGTCGGCCAGGTGGTGCAGGCCACCGTGCCGATCTTCACCCTGGCCCGCGACGGCGAGCGCGACGCGGTGTTCAACGTCTACGAGTCGTTGTTCAGCCACGATGTCGACGGCCAGCGGATCACCGTCAGCCTGCTCGGCAAGCCGGAAGTCACCGCCAGCGGCAAGGTCCGCGAGATCACCCCCACGGTGGACGAGCGCAGCGGTACGCTGAAGGTCAAGGTCGGCCTCGACTCGGTGCCGGCGGAAATGAGCCTCGGCAGCGTGGTCAACGCCAGCGTCGCCGCGCCGGCCGAGCACAGCGTGGTGCTGCCCTGGTCGGCGCTGTCCAAGGTCGGCGAGCAGCCGGCGGTCTGGTTGCTCGACCAGCAAGGCAAGGCGCGTCTGCAACCGGTGCGGGTGGCACGCTACGCCAGCGAGAAGGTGGTCATCGACGGTGGCCTGGAGGCGGGCCAGACGGTGGTCACGGTGGGCGGCCAACTGCTCCATCCGGGCCAGGTGGTCGAGGTGGCCCAGCCGCCGCAGCCGACCCAGAGCACCGCCAGCCGCGACGCCGTGGGCGGAGGCCAGCCATGA MSDARGAFHSKGRWSRMALPAILCAGLLVGCGAEPPAEEHVRVLAQTVKMAEFASATSITGDIQARVQADQSFRVGGKIVERLVDVGDHVAAGQVLARLDPQDQRSNVENAQAAVAAQQAQSKLADLNYQRQKALLPKGYTSQSEYDQALASVRSAQSSLKAAQAQLANARDLLSYTELRASDAGVITARQAEVGQVVQATVPIFTLARDGERDAVFNVYESLFSHDVDGQRITVSLLGKPEVTASGKVREITPTVDERSGTLKVKVGLDSVPAEMSLGSVVNASVAAPAEHSVVLPWSALSKVGEQPAVWLLDQQGKARLQPVRVARYASEKVVIDGGLEAGQTVVTVGGQLLHPGQVVEVAQPPQPTQSTASRDAVGGGQP Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0157 CDS 178455 179525 + triB Resistance-Nodulation-Cell Division (RND) triclosan efflux membrane fusion protein, TriB Class 1 NP_248847.1 15595355 probable RND efflux membrane fusion protein precursor PMID:15687295 ; PMID:17720796 47% similar to membrane-fusion protein IfeA [Agrobacterium tumefaciens] PSORT: Lipoprotein Possible modific. site: 18 CRend: 1 Sequence Pattern: CGDE ; Type II (lipoprotein) export signal predicted by LipoP (cleavage after residue 18) Antibiotic resistance and susceptibility ; Membrane proteins Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0006810|transport|IEA ; molecular_function|GO:0005215|transporter activity|IEA TIGR01730|RND_mfp|efflux transporter, RND family, MFP subunit|subfamily|8e-66||Transport and binding proteins|Unknown substrate PF00529|HlyD, HlyD family secretion protein|62|336|3e-09 COG0845|AcrA, Membrane-fusion protein [Cell envelope biogenesis, outer membrane]. ; COG0845|AcrA, Membrane-fusion protein [Cell envelope biogenesis, outer membrane]. ; COG0845|AcrA, Membrane-fusion protein [Cell envelope biogenesis, outer membrane]. ATGAAGCCGTTTTCCCTCGCCGGCCTGTTCGGCTTCGCCCTGCTCCTCTCCGGCTGCGGCGACGAGCCGCCGCCGGCACCGCCGCGGCCGGTGCTGACGGTGACCGTGAAGACCCTGAAGAACGACGACCTCGGTCGCTTCGCCGGGAGCATCCAGGCGCGCTACGAGAGCGTGCTCGGCTTCCGCACCAACGGACGGATCGCCTCGCGCCTGTTCGACGTCGGTGACTTCGTCGGCAAGGGCGCGCTGCTGGCGACCCTCGACCCCACCGACCAGCAGAACCAGTTGCGCGCCAGCCAGGGCGACCTGGCCAGCGCCGAGGCACAGTTGATCGACGCCCAGGCCAATGCCCGGCGCCAGGAAGAACTGTTCGCCCGCAGCGTCACCGCCCAGGCGCGCCTGGACGATGCGCGGACCCGCCTGAAGACCAGCCAGGCCAGCTTCGACCAGGCCAAAGCGGCGGTGCAGCAGGCCAGGGACCAGCTTTCCTACACGCGCCTGGTGACCGATTTCGACGGCGTCATCACCACCTGGCACGCCGAGGCCGGGCAAGTGGTCAGCGCCGGCCAGGCGGTGGTCACCCTGGCCCGGCCCGAAGTGCGCGAGGCAGTCTTCGACCTGCCCACCGAGGTCGCCGAGAGCCTGCCGGCCGACGCGCGCTTCCTGGTCAGCGCCCAGCTCGACCCGCAGGCCAGGACCACCGGCAGCATCCGCGAGCTGGGTCCGCAGGCCGACGCCTCGACCCGCACCCGTCGCGTGCGCCTGAGCCTGGCGCAGACGCCGGAGGCGTTTCGCCTCGGTTCGACCATCCAGGTCCAGCTGAGCAGCGCCGGTAGCGTGCGCAGCGTGCTGCCGGCCAGCGTGCTGCTGGAGCGCGACGGCAAGACCCAGGTCTGGGTCGTCGATGGGAAACAGTCCAGCGTGGCCCTGCGCGAGGTACAGGTGCTCAGCCGCGACGAACGCCAGGTGGTGATCGGACAGGGCCTGGCCGACGGCGACCGGGTGGTCCGCGCCGGAGTCAACAGCCTCAAGCCCGGCCAGAAGATCAAACTCGACGAGGATGCGCGATGA MKPFSLAGLFGFALLLSGCGDEPPPAPPRPVLTVTVKTLKNDDLGRFAGSIQARYESVLGFRTNGRIASRLFDVGDFVGKGALLATLDPTDQQNQLRASQGDLASAEAQLIDAQANARRQEELFARSVTAQARLDDARTRLKTSQASFDQAKAAVQQARDQLSYTRLVTDFDGVITTWHAEAGQVVSAGQAVVTLARPEVREAVFDLPTEVAESLPADARFLVSAQLDPQARTTGSIRELGPQADASTRTRRVRLSLAQTPEAFRLGSTIQVQLSSAGSVRSVLPASVLLERDGKTQVWVVDGKQSSVALREVQVLSRDERQVVIGQGLADGDRVVRAGVNSLKPGQKIKLDEDAR Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0158 CDS 179522 182569 + triC Resistance-Nodulation-Cell Division (RND) triclosan efflux transporter, TriC Class 1 NP_248848.1 15595356 probable RND efflux transporter PMID:15687295 ; PMID:17720796 45% similar to putative cation efflux system protein [Helicobacter pylori] PD01612: PROTEIN TRANSMEMBRANE TRANSPORT INNER MEMBRANE RESISTANCE ; PR00702/PF00873: ACRIFLAVIN RESISTANCE PROTEIN FAMILY SIGNATURE ; 11 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius ; Export across inner membrane confirmed by PhoA fusion screen Antibiotic resistance and susceptibility ; Transport of small molecules Cytoplasmic Membrane[Class 2] ; Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0030001|metal ion transport|IEA ; cellular_component|GO:0016021|integral to membrane|IEA ; molecular_function|GO:0051139|metal ion:hydrogen antiporter activity|IEA TIGR00914|2A0601|heavy metal efflux pump, CzcA family|subfamily|4.1e-84||Cellular processes | Transport and binding proteins|Detoxification | Cations and iron carrying compounds PF00873|ACR_tran, AcrB/AcrD/AcrF family|7|1005|1e-128 COG0841|AcrB, Cation/multidrug efflux pump [Defense mechanisms]. ; COG0841|AcrB, Cation/multidrug efflux pump [Defense mechanisms]. ; COG0841|AcrB, Cation/multidrug efflux pump [Defense mechanisms]. ATGAAGGGCGGTTTCAACCTGTCGGACTGGGCCCTGCGCCACCAGTCCCTGGTCTGGTACCTGATGGCGGTATCGCTGGTGATGGGCGTGTTCTCCTACCTCAACCTGGGGCGCGAGGAGGATCCCTCGTTCGCCATCAAGACCATGGTCATCCAGACCCGCTGGCCGGGCGCCACGGTGGACGACACCCTGGAGCAGGTCACCGACCGCATCGAGAAGAAGCTCGAGGAGCTGGACTCGCTGGATTACGTGAAGAGCTACACGCGACCCGGCGAATCGACGGTCTTCGTCTACCTCAAGGACACCACCAAGGCCGGCGACATCCCGGATATCTGGTACCAGGTGCGCAAGAAGATATCCGACATCCAGGGCGAATTCCCCCAGGGCATCCAGGGACCGGGTTTCAACGACGAGTTCGGCGACGTGTTCGGCAGCGTCTACGCCTTCACCGCCGATGGCCTGGACTTCCGCCAGCTGCGCGACTACGTGGAGAAGGTGCGCCTGGACATCCGCTCGGTGAAAGACCTGGGCAAGGTGCAGATGATCGGTGCGCAGAACGAGGTCATCTACCTCAACTTCTCTACCCGCAAGCTGGCCGCCCTCGGTCTCGACCAGCGCCAGGTCGTGCAGAGCCTGCAGGCGCAGAACGCGGTGACCCCGTCCGGCGTGGTCGAGGCCGGCCCCGAGCGCATCTCGGTGCGCACCTCCGGCAACTTCCGTTCGGAAAAGGACCTGCAGGCGGTCAACCTGCGGGTCAACGATCGTTTCTACCGGCTGTCCGACCTGGCCAGCATCAGCCGCGATTTCGTCGACCCGCCGACCTCGCTGTTCCGCTACAAGGGCGAGCCGGCCATCGGCCTGGCGGTGGCGATGAAGGAGGGCGGCAATATCCTCGAGTTCGGCGAGGCGCTCAATGCGCGCATGCAGGAGATCACCGGCGAACTGCCGGTTGGCGTCGGCGTGCACCAGGTGTCGAACCAGGCCCAGGTGGTGAAGAAGGCGGTCGGCGGTTTCACCCGGGCGCTGTTCGAGGCGGTGGTGATCGTCCTCATCGTCAGCTTCGTCAGCCTCGGCCTGCGCGCCGGGCTGGTGGTGGCCTGCTCGATCCCGCTGGTGCTGGCGATGGTCTTCGTGTTCATGGAATACACCGACATCACCATGCAGCGGGTTTCCCTCGGCGCGCTGATCATCGCCCTCGGCCTGCTGGTGGACGATGCCATGATCACCGTGGAGATGATGATCACGCGCCTCGAACTGGGCGACTCGCTACACGACTCGGCGACCTACGCCTACACCTCGACGGCCTTCCCGATGCTCACCGGGACCCTGGTGACGGTGGCCGGCTTCGTACCCATCGGGCTCAACGCCAGCTCCGCCGGCGAGTACACCTTCACCCTGTTCGCAGTGATCGCCGTGGCGCTGCTGCTGTCGTGGATCGTCGCGGTGCTGTTCGCCCCGGTGATCGCCGTGCACATCCTGCCGAAGACTCTCAAGCACAAGTCGGAGCAGAAGAAGGGCCGCATTGCCGAGCGTTTCGACAGCCTGCTGCACCTGGCGATGCGCCGGCGCTGGACGACCATCTTCCTCACCGCGCTGCTGTTCGGCGTGTCGCTGTTCCTGATGAAGTTCGTCCAGCACCAGTTCTTCCCGTCTTCCGACCGTCCGGAACTGCTGGTCGACCTCAACCTGCCGCAGAACAGCAGCATCCACGAGACCAGGGCGGTGATGGACCGCCTGGAAGCGACGCTGAAGGACGACGAGGACATCGACCACTGGAGCGCCTACGTCGGCGAAGGCGCGATCCGCTTCTACCTGCCGCTGGACCAGCAGTTGCAGAACAACTTCTATGGCCAGCTGGTGATCGTCACCAAGGACCTGGAGGCCCGCGAGCGCGTCGCCGCACGCCTGCGCGATCGCTTGCGCAAGGACTACGTCGGCATCAGCACCTACGTGCAGCCGCTGGAGATGGGGCCGCCGGTGGGACGGCCGATCCAGTACCGGGTCAGCGGACCGCAGATCGACAAGGTCCGCGAGTACGCCATGGGCCTGGCCGGCGTGCTCGACGGCAACCCGAACATCGGCGATATCGTCTACGACTGGAACGAGCCCGGGAAGATGCTCAAGATCGACATCGCCCAGGACAAGGCGCGCCAGCTCGGGCTTTCCTCCGAGGACGTGGCGCAGATCATGAACAGCGTGGTGACCGGCAGCGCGGTGACCCAGGTGCGCGACGACATCTACCTGGTGAACGTCATCGGCCGCGCCGAGGATAGCGAGCGCGGCTCGCTGGAGACCCTGGAGAGCCTGCAGATCGTCACGCCCAGCGGCACCTCGATCCCGCTCAAGGCGTTCGCCAAGGTCAGCTACGAGCTGGAGCAGCCGCTGGTGTGGCGCCGCGACCGCAAGCCGACGATCACGGTGAAGGCGTCGCTGCGCGGCGAGATCCAGCCCACCGACCTGGTCGCCCGGCTGGCGCCGGAGGTCAAGCGCTTCGCCGACGGCCTGCCGGCGAACTACCGGATCGAAGTGGGCGGCACGGTGGAGGAGAGCGGCAAGGCCGAGGGCCCGATCGCCAAGGTGGTGCCGCTGATGCTGTTCCTCATGGCGACCTTCCTGATGATCCAGTTGCAGAGCGTGCAGAAGCTATTCCTGGTGGCCAGCGTCGCGCCGCTGGGGCTGATCGGGGTGGTCGCGGCGTTGCTGCCGACCGGCACGCCGATGGGCTTCGTGGCGATCCTCGGGATTCTCGCGCTGATCGGCATCATCATCCGCAACTCGGTGATCCTGGTGACCCAGATCGATGCCTTCGAGAAAGACGGCAAGACGCCCTGGGAAGCCGTGCTGGAAGCCACCCACCACCGCACCCGGCCGATCCTGCTGACGGCGGCGGCGGCCAGCCTGGGGATGATCCCCATCGCCCGCGAAGTGTTCTGGGGGCCGATGGCCTATGCGATGATCGGCGGCATCGTCGCCGCCACGCTGCTCACGCTGATCTTCCTGCCGGCGCTGTACGTCGCCTGGTACCGGATTCCGGAACCGGGACGCTGA MKGGFNLSDWALRHQSLVWYLMAVSLVMGVFSYLNLGREEDPSFAIKTMVIQTRWPGATVDDTLEQVTDRIEKKLEELDSLDYVKSYTRPGESTVFVYLKDTTKAGDIPDIWYQVRKKISDIQGEFPQGIQGPGFNDEFGDVFGSVYAFTADGLDFRQLRDYVEKVRLDIRSVKDLGKVQMIGAQNEVIYLNFSTRKLAALGLDQRQVVQSLQAQNAVTPSGVVEAGPERISVRTSGNFRSEKDLQAVNLRVNDRFYRLSDLASISRDFVDPPTSLFRYKGEPAIGLAVAMKEGGNILEFGEALNARMQEITGELPVGVGVHQVSNQAQVVKKAVGGFTRALFEAVVIVLIVSFVSLGLRAGLVVACSIPLVLAMVFVFMEYTDITMQRVSLGALIIALGLLVDDAMITVEMMITRLELGDSLHDSATYAYTSTAFPMLTGTLVTVAGFVPIGLNASSAGEYTFTLFAVIAVALLLSWIVAVLFAPVIAVHILPKTLKHKSEQKKGRIAERFDSLLHLAMRRRWTTIFLTALLFGVSLFLMKFVQHQFFPSSDRPELLVDLNLPQNSSIHETRAVMDRLEATLKDDEDIDHWSAYVGEGAIRFYLPLDQQLQNNFYGQLVIVTKDLEARERVAARLRDRLRKDYVGISTYVQPLEMGPPVGRPIQYRVSGPQIDKVREYAMGLAGVLDGNPNIGDIVYDWNEPGKMLKIDIAQDKARQLGLSSEDVAQIMNSVVTGSAVTQVRDDIYLVNVIGRAEDSERGSLETLESLQIVTPSGTSIPLKAFAKVSYELEQPLVWRRDRKPTITVKASLRGEIQPTDLVARLAPEVKRFADGLPANYRIEVGGTVEESGKAEGPIAKVVPLMLFLMATFLMIQLQSVQKLFLVASVAPLGLIGVVAALLPTGTPMGFVAILGILALIGIIIRNSVILVTQIDAFEKDGKTPWEAVLEATHHRTRPILLTAAAASLGMIPIAREVFWGPMAYAMIGGIVAATLLTLIFLPALYVAWYRIPEPGR Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0159 CDS 182768 183706 + probable transcriptional regulator Class 3 NP_248849.1 15595357 52% similar to regulator GstR [Bradyrhizobium japonicum] PS00044: Bacterial regulatory proteins, lysR family proteins Transcriptional regulators Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] TIGR03418|chol_sulf_TF|putative choline sulfate-utilization transcription factor|hypoth_equivalog|1.6e-10||No Data|No Data PF00126|HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family|4|62|8e-15 COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription]. GTGGACACATTGCAAGGCATGCGCGTGTTCGCCAGGGTGGTGGACAGCGGCAGCTTCACTTCCGCCGCCCAGGCCCTGGACCTGTCCACCGCGCAGGTATCGCGGCTGATCTCCGACCTGGAGGCGCACCTGCAGACGCGCCTGCTGCACCGCACCACCCGGCGCCTGGCCCTGACCGAAGCCGGCGAGCGTTACCTGGAACGGTGCCGCGGGATCCTCGAGGACATCGAGGTCGCCGAGGCCGAAGCCGCCGGCGCGCACATCCGCCCCTGCGGCCGCTTGCGCGTGCAGTCGCTGATGGGCATGGGCCAGCATCACCTGGTGCCGATGATCGCCCGCTACGGCGCACTGTTCCCCGACGTGGTGATCGAGCTGACCCTGTCCCAGCGCAACCCGGACATGCTCGAGGAAGGCCAGGATGTGCTGATCACCGGCGAGCGCCAGTTGCCCGACTCGGAGTTCGTCGCCCAGCGCCTGGGCAGCATCCACAGCGTGCTCTGCGCCAGTCCCGGCTACCTGCAGCAGCACGGCGTGCCACGCTCGGTGGACGACCTGGAGCGCCACGTCTGCCTGCGCCTGCAGGACCCGGCCTACCCGGAGGGCTGGATCTTCGCCGACGAGCAGGGCGAGCGCACCGTCAGCCCGCAGAACACCTTCATGGTCAATGTCGCCGAGGTCATGGCCCAGGCGGCCAAGGCCGACCTCGGCATCGCCCTGCTGCCCAGCTACGTGGCGGCCGCGGCGCTGCGCAACGGCGAGCTGCTACGGGTGTTGCCCGGCCATGCCATGCACCAGCGGACCATCTATGCGCTGTATCCCTCGCGGCGTTACCTGGACGCGAAGATCCGCACCTGGGTCGATCTGTTGCAACAGGAACTTCCCCAGGCATTCGCCCGCGACGAAACTACCATGCAAAGTTCAAGTTACTGTGCACAGTGA MDTLQGMRVFARVVDSGSFTSAAQALDLSTAQVSRLISDLEAHLQTRLLHRTTRRLALTEAGERYLERCRGILEDIEVAEAEAAGAHIRPCGRLRVQSLMGMGQHHLVPMIARYGALFPDVVIELTLSQRNPDMLEEGQDVLITGERQLPDSEFVAQRLGSIHSVLCASPGYLQQHGVPRSVDDLERHVCLRLQDPAYPEGWIFADEQGERTVSPQNTFMVNVAEVMAQAAKADLGIALLPSYVAAAALRNGELLRVLPGHAMHQRTIYALYPSRRYLDAKIRTWVDLLQQELPQAFARDETTMQSSSYCAQ Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0160 CDS 183822 184007 + hypothetical protein Class 4 NP_248850.1 15595358 PMID:15687295 PSORT predicted signal peptide ; type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 24) ; type I export signal computationally predicted by Phobius (cleavage after residue 24) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 24) Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] ATGAATCGCCAGATCCTTGCTGCCGCCATACTCAGTTTGTTTTCCCTCGCATTTTCCCAGGCCGGTTTCGCCGAAGAGTCCTCGCTGATGACCAACCGCATGGTCGACGCCAACCAGCAGGCCATCGAGCACCAGCAGGAACTTTCCGCCTCCGCCGCGCAGGCCGGGGCCCGCAGCGACTCCTGA MNRQILAAAILSLFSLAFSQAGFAEESSLMTNRMVDANQQAIEHQQELSASAAQAGARSDS Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0161 CDS 184287 184439 + hypothetical protein Class 4 NP_248851.1 15595359 Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] GTGGAAAGCCTAAAGCCCGATGAGTCGAAGAGACTTTCAATAGAAGAGTCCGACTGCGTTTCAGCCGGTTTCCAGTGTCCGGAAATACACTGGCAAGACTTCCCGACGCCGAACTTTGATTGCTCCTATTCGACGTCTTCTCAAGGCCGCTGA MESLKPDESKRLSIEESDCVSAGFQCPEIHWQDFPTPNFDCSYSTSSQGR Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0162 CDS 184594 185928 + opdC histidine porin OpdC Class 1 NP_248852.1 15595360 PMID:15687295 ; PMID:16352820 58% similar to porin OprD precursor [Pseudomonas aeruginosa] PSORT: Seems to have a cleavable N-term signal seq ; Possible cleavage site: 22 ; type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 22) ; type I export signal computationally predicted by Phobius (cleavage after residue 22) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 22) Membrane proteins ; Transport of small molecules Outer Membrane[Class 2] ; Outer Membrane[Class 3] ; Outer Membrane[Class 3] PF03573|OprD, outer membrane porin, OprD family|6|443|1e-152 ATGAGGAATCTGTTCGCCTTGACGCCGATGGCGCTGGCGCTGTGCACCGCGTCCGCCGCCTGGGCCGATGAGGGGGAAGCCAAAGAAGGCTTCATCGAAGGCTCCAGCCTCCAATTGCTGACCCGCAACTACTACTTCAACCATGACCGCCGGCACGCTTCCGGGCACGACAGCAAGGAATGGGCGCAAGGCTTCATCGCCACCTTTCAGTCCGGCTACACGCCCGGCGTGGTCGGCTTCGGCGTCGACGCCTACGGCATGCTCGGGCTGAAGCTCGACGGCGGCGGCGGTACCGGCGGCACCAGCATCCTGCCGATCACCTCGCCGAGCAAGGAAGGCTACGAATCCGGCAAGGCGCCCGATGAGTTCTCCAGTGGCGGGGCGGCGCTGAAGATCCGCGCCTTCGACACCGAGCTGAAGCTGGGCGACCAGTTCCTCAGCAACCCGGTGGTCGCCGGCGGCGAGTCGCGCATGCTGCCGCAGACCTTCCGCGGTGTGAGCCTGACCAACAACAGTTTCGAGGACCTGACCCTCACGGCTGGCCAGGTCAGTTTCACCAAGTACTACAACCAGAGTGGCCACCGTCGCCTCGGCTCGTACTACGGCGAACTGCCGGGCGACCGCGACAGCCATCATCTCAGCTGGCTGGGCGGCACCTGGGGCGGCATCGAGGGCTTCACCAGCAGCCTGTACGCCGCCGAACTGCAGAACGTCTGGAAGCAGTACTACGCCGACGTCGACTACACCTACGAGATCGACGACAACTGGTCGCTGAACCCCGGCGCGCACTACTACAAGACCGTCGACAGCGGCGACTCGTTGCTCGGCCGGATCGACAACAACACCTACAGCCTGCATTTCGCGGTCGGCTACAGGCAGCACACCGTCACCGCGGTGCTGCAGAAGGTCAACGGCAACACGCCGTTCGACTACATCAACCAGGGCGACAGCATCTTCCTCGACAACTCGCAGCAGTATTCCGACTTCAACGGTCCCAACGAGAAGTCCTGGAAGCTGCAATACGACTACGACTTCGTCGCCCTCGGCCTACCCGGCCTGAGCGCCTCGGCCTCGTACTCGCGCGGCAAGCTGGACCTGACCCGGGTCGATCCGGACAGCCCCGGCTACGGCGGCTGGTACAGCGCCGACGGCAAGAACGCCAAGCACTGGGAACGCGACCTCGACCTGCAGTACGTGGTCCAGGGCGGTCCGGCCAAGGACCTCTCGCTGCGCCTGCGCTGGGCCACCCACCGCGGCACCGGCGGCTACAGCGCGGTGGACAATGACATCGACGAATACCGGGTGATCGTCGACTATCCCATCGACGTGTTCTGA MRNLFALTPMALALCTASAAWADEGEAKEGFIEGSSLQLLTRNYYFNHDRRHASGHDSKEWAQGFIATFQSGYTPGVVGFGVDAYGMLGLKLDGGGGTGGTSILPITSPSKEGYESGKAPDEFSSGGAALKIRAFDTELKLGDQFLSNPVVAGGESRMLPQTFRGVSLTNNSFEDLTLTAGQVSFTKYYNQSGHRRLGSYYGELPGDRDSHHLSWLGGTWGGIEGFTSSLYAAELQNVWKQYYADVDYTYEIDDNWSLNPGAHYYKTVDSGDSLLGRIDNNTYSLHFAVGYRQHTVTAVLQKVNGNTPFDYINQGDSIFLDNSQQYSDFNGPNEKSWKLQYDYDFVALGLPGLSASASYSRGKLDLTRVDPDSPGYGGWYSADGKNAKHWERDLDLQYVVQGGPAKDLSLRLRWATHRGTGGYSAVDNDIDEYRVIVDYPIDVF Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0163 CDS 185957 186754 - probable transcriptional regulator Class 3 NP_248853.1 15595361 52% similar to putative regulatory protein YeaM [Escherichia coli] PS00041: Bacterial regulatory proteins, araC family signature Transcriptional regulators Unknown[Class 3] ; Unknown[Class 3] COG2207|AraC, AraC-type DNA-binding domain-containing proteins [Transcription]. ; COG2207|AraC, AraC-type DNA-binding domain-containing proteins [Transcription]. ; COG2207|AraC, AraC-type DNA-binding domain-containing proteins [Transcription]. ATGACGATGAACGGACAGCCTGCGGAACTGCACCGCCCGATTCCCACCCTCGCCCGCCTGCCACGGCCGGTCTACGCGCGCGCCGAAAGCCTGCGCGCCGGCTCTTGGACCTCGCGCCACCGGCACGCCTGGGTACAGCTTTCCTACGCCATCAGCGGCGTGCTCGGCGTACATACCGCCGAGGGCAGCTTCTTCGCCCCGCCGCAGCGGGCGATCTGGATTCCGGCGCAACTGGAACACGAGGTGGTCACCTCCACCCGCGCCGAGATGCGCAGCCTGTACATCCGTGGCGACGCCTGCGCCTGGGCGCCGACGCGTTGCCGGGTGCTGGAGGTGACGCCGCTGGCGCGCGAGCTGATCAAGAGTTTCTGCGAGTTGCCGGTGGACTACCCGGAGGGCGACAGCGCCGAATCGCGGCTGGTGCAGGTGCTGCTGGACCAGTTGCGGCTGCTGCCGGAGGTCGCCTTCTCCCTGCCGATGCCGCGCGAGCCGCGCCTGCTGCGGCTGTGCCAGGCACTGATCGACGAACCGACCCAGAGCCTGACCATGGGCGACTGGGCGCAGCGCCTGGGCACCTCGGAAAAGACCCTGTCGCGCCTGTTCCAGCGCGAGACCGGGATGAACTACCGGCTCTGGCGCCAACGCCAGCGCCTGCTCGCCTCGCTCAACGCGCTGGAGGCCGGCGACAGCGTCACCGGCGCCGCCCTGGACAGCGGCTACGACTCGACCTCGGCCTATATCGCCGCCTTCAAGGGACTCTTCGGCTTCACTCCCGGCGAACTGTTCCGCCAGCGCTGA MTMNGQPAELHRPIPTLARLPRPVYARAESLRAGSWTSRHRHAWVQLSYAISGVLGVHTAEGSFFAPPQRAIWIPAQLEHEVVTSTRAEMRSLYIRGDACAWAPTRCRVLEVTPLARELIKSFCELPVDYPEGDSAESRLVQVLLDQLRLLPEVAFSLPMPREPRLLRLCQALIDEPTQSLTMGDWAQRLGTSEKTLSRLFQRETGMNYRLWRQRQRLLASLNALEAGDSVTGAALDSGYDSTSAYIAAFKGLFGFTPGELFRQR Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0164 CDS 186832 188448 + probable gamma-glutamyltranspeptidase Class 3 NP_248854.1 15595362 48% similar to cephalosporin acylase [Pseudomonas sp.] ; 63% similar to putative gamma-glutamyltranspeptidase [Mycobacterium tuberculosis] PS00462: Gamma-glutamyltranspeptidase signature Glutathione metabolism [PseudoCAP] 2.3.2.2 Amino acid biosynthesis and metabolism Periplasmic[Class 2] ; Periplasmic[Class 3] ; Periplasmic[Class 3] biological_process|GO:0006750|glutathione biosynthetic process|IEA ; molecular_function|GO:0003840|gamma-glutamyltransferase activity|IEA TIGR00066|g_glut_trans|gamma-glutamyltransferase|equivalog|1.2e-91|2.3.2.2|Biosynthesis of cofactors, prosthetic groups, and carriers|Glutathione and analogs PF01019|G_glu_transpept, Gamma-glutamyltranspeptidase|37|530|1e-169 COG0405|Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism]. ; COG0405|Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism]. ; COG0405|Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism]. ATGCTCGACTTCTCCGCCCACGCGCTTCCCTACGCCTCGCAACGTTCGCCGGTCCATGCCCGCCGCGGCATGGTCGCCACCTCGCAGCCGCAGGCGGCGCAGGTCGGGCTGGAGATATTGCGCCGTGGCGGCAATGCCATCGACGCGGCGATCGCCACCGCCGCCGCGCTGACGGTGGTCGAGCCGACCGGCTGCGGGATTGGCGGCGATGCCTTCGCCCTGGTCTGGACCCGCGGACGCCTGCACGGCCTGGACGCCAGCGGGCGCGCGCCGGGCCTGCTCGATCGCGAGCGGGTGCGCGCCGCCGGCCACGAGCGGATGCCGCTGTACGGCTGGACGCCGGTCACCGTGCCGGGCTGTCCGGCGGCCTGGGGCGAACTGTCGCGGCGCTTCGGCAAATTGCCGTTCGAACAACTGCTGCGGCCGGCGATCGAGCTGGCTCGCGATGGCTTTCCGGTCTCGCCGGTGATCGCCCGCCTGTGGCAGAGCGGCCTGGACAAGTTCCGCGCGGCGTTGCCGCAGCGGCCCGAGCTACGGGCCTGGTTCGACGAGTTCCTCATCGACGGCCGGGCGCCGCGCGCCGGCGAGGTGTTCCGCCAGCCGGGCCAGGCCGACACCCTGGACGAGCTGGCGCGCAGCCAGTGCGAAAGCTTCTATCGCGGCGAGCTGGCCAGGGCCATCGTCGGCCACGCCGAGTGCAGCGGCGGCTACCTGCGCGCGGAGGACCTGGCCGGCTACCAGGCGAAGTGGGTCGAACCGATCTCGCTGAACTACCGTGGCTATGACGTCTGGGAGATTCCGCCGAGCGGCCAGGGCCTGATCGCCCTGATGACCCTGAACATCCTCAAGGGCTTCGAATTCGGCGAGCGCGACTGCGCGCGGACCTGGCATCGCCAACTGGAGGCGATGAAGCTGGCGTACGTCGACGGGCTGCACTACATCAGCCAGCCGCAGTCGATGCGGGTCTCGGTCGAGGAACTGCTGCACGAGGACTACGCCGCCAGCCGCCGTGCGCTGATCGGCGAGCGCGCGCTCGATCCCAGCCCCGGCCAGCCGAGGCCGGGCGGCACGGTGTACCTGGCCTGTGGCGACGAGGAGGGCAACCTGGTCTCGTTCATCCAGAGCAACTACCACGGCTTCGGCTCCGGCGTGGTGGTGCCCGGCACCGGCATCGCCTTGCAGAACCGCGGCGCCGAGTTCAGCCTCGATCCGGACCACGTGAATTGCCTGGAGCCGGGCAAGCAGACCTTCCACACCATCATTCCCGGTTTCCTCAGCAAGGACGGCGTGCCGCTCGGCCCGTTCGGCGTGATGGGCGCCTATATGCAGCCGCAGGGCCACGTGCAGATGGTGATGAACCTGGTGGACTTCGGCCTCAACCCCCAGGCTGCCCTCGACGCGCCGCGCTGGCAGTGGCTGGGCGGGCTGCGCGTCGGCATCGAACATGCCGCGCCGCGCGCGCTGGCGGCGGAGCTGGCGCAGCGTGGGCACCAGGTGGAGATCGCCTACGACTCGACCAGCTACGGGCGCGGCCAGATCGTCCTGCGCGACCCGGCCAGCGGCGTGCTCTGTGGCGGCACCGAGCCGCGCACCGATTCGCAGATCGCGGTGTGGTGA MLDFSAHALPYASQRSPVHARRGMVATSQPQAAQVGLEILRRGGNAIDAAIATAAALTVVEPTGCGIGGDAFALVWTRGRLHGLDASGRAPGLLDRERVRAAGHERMPLYGWTPVTVPGCPAAWGELSRRFGKLPFEQLLRPAIELARDGFPVSPVIARLWQSGLDKFRAALPQRPELRAWFDEFLIDGRAPRAGEVFRQPGQADTLDELARSQCESFYRGELARAIVGHAECSGGYLRAEDLAGYQAKWVEPISLNYRGYDVWEIPPSGQGLIALMTLNILKGFEFGERDCARTWHRQLEAMKLAYVDGLHYISQPQSMRVSVEELLHEDYAASRRALIGERALDPSPGQPRPGGTVYLACGDEEGNLVSFIQSNYHGFGSGVVVPGTGIALQNRGAEFSLDPDHVNCLEPGKQTFHTIIPGFLSKDGVPLGPFGVMGAYMQPQGHVQMVMNLVDFGLNPQAALDAPRWQWLGGLRVGIEHAAPRALAAELAQRGHQVEIAYDSTSYGRGQIVLRDPASGVLCGGTEPRTDSQIAVW Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0165 CDS 189120 189956 + hypothetical protein Class 4 NP_248855.1 15595363 PMID:15687295 46% similar to region of outer membrane protein Tsx [Salmonella typhimurium] type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 22) ; type I export signal computationally predicted by Phobius (cleavage after residue 22) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 22) ; Export across inner membrane confirmed by PhoA fusion screen Hypothetical, unclassified, unknown Outer Membrane[Class 2] ; Outer Membrane[Class 3] ; Outer Membrane[Class 3] PF03502|Channel_Tsx, Nucleoside-specific channel-forming protein, Tsx|10|278|6e-21 COG3248|Tsx, Nucleoside-binding outer membrane protein [Cell envelope biogenesis, outer membrane]. ; COG3248|Tsx, Nucleoside-binding outer membrane protein [Cell envelope biogenesis, outer membrane]. ; COG3248|Tsx, Nucleoside-binding outer membrane protein [Cell envelope biogenesis, outer membrane]. ATGAGCCGCACACTCGCCACCGTGATGCTAGCCGGGGGGCTACTGGCCGCAGGCCAGGCTGTCGCCGAAGACCATGACATGACGCCGACCCACGAGACCGACTCGGGGCCGCTGCTCTGGCACAACGAGAGCCTGACCTACCTCTACGGCAAGAACTTCAAGATCAACCCGCCGATCCAGCAGACCTTCACCCTGGAACATGCCAGCGGCTGGACCTGGGGCGACCTGTTCATCTTCTTCGACCAGATCAACTACAACGGCAAGGAAGACGCCAGCAACGGCAAGAACACCTACTACGGCGAGATCACTCCGCGCCTGAGCTTCGGCAAGCTCACCGGAGCGGACCTCTCCTTCGGCCCGGTGAAGGACGTGCTGCTGGCCGGCACCTACGAGTTCGGCGAAGGCGACACCGAGGCCTACCTGCTCGGCCCGGGCTTCGACCTGGCGATCCCCGGCTTCGACTACTTCCAGCTCAACTTCTACTACCGCAAGCCCGACGGCAACCGCGTGCGCGCCGGCGCCTGGCAGATCACCCCGGTGTGGTCCTACACCATTCCGGTGGGCAACTCCGACATCCTCATCGACGGCTACATGGACTGGGTGATCAACAACAAGAGCGCCAGCACCAGCCGCCGCAACCAGAGCGACTATCACGCCAACCTGCACTTCAACCCACAGGTCAAGTACGACCTGGGCAAGGCCCTCGGCTACGAGCCTAAGCACCTGTACGTGGGCCTGGAGTACGACTACTGGTCCGACAAGTACGGTGTGAAGGACTCGCAGTACTTCACCACCGACCAGAACACCGCAAGCTTCCTGGTCAAGTACCACTTCTGA MSRTLATVMLAGGLLAAGQAVAEDHDMTPTHETDSGPLLWHNESLTYLYGKNFKINPPIQQTFTLEHASGWTWGDLFIFFDQINYNGKEDASNGKNTYYGEITPRLSFGKLTGADLSFGPVKDVLLAGTYEFGEGDTEAYLLGPGFDLAIPGFDYFQLNFYYRKPDGNRVRAGAWQITPVWSYTIPVGNSDILIDGYMDWVINNKSASTSRRNQSDYHANLHFNPQVKYDLGKALGYEPKHLYVGLEYDYWSDKYGVKDSQYFTTDQNTASFLVKYHF Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0166 CDS 190198 191604 + probable transporter Class 3 NP_248856.1 15595364 PMID:15687295 67% similar to putative transport protein YicE [Escherichia coli] 12 predicted transmembrane helices ; PS01116: Xanthine/uracil permeases family signature ; 12 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Membrane proteins ; Transport of small molecules Cytoplasmic Membrane[Class 2] ; Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] TIGR03173|pbuX|xanthine permease|subfamily|1.8e-167||No Data|No Data PF00860|Xan_ur_permease, Permease family|24|410|8e-61 COG2233|UraA, Xanthine/uracil permeases [Nucleotide transport and metabolism]. ; COG2233|UraA, Xanthine/uracil permeases [Nucleotide transport and metabolism]. ; COG2233|UraA, Xanthine/uracil permeases [Nucleotide transport and metabolism]. ATGCATAGCGAAGACCAACGCCCCAACGACCTCATCTACGGCCTCGACGACCGGCCGCGCCCGCTTCCCGCCTTCCTTGCCGCGCTACAGCACGTGCTGGCCAGCTTCGTCGGCATCGTCACTCCGCCGCTGGTGATCGGCTCGCTGCTCGGCCTCGGCGAGCACCTGCCGTACTTGATCAGCATGGCGCTGATGGTTTCCGGCGCCGGCACCCTGATCCAGGCGCGCCGGCCGTTCGGCATCGGCGCCGGGATGATCTGCCTGCAAGGCACCAGCTTCGCCTTCCTCGGCGCCGTGCTGGCCGCCGGGATGCTGGTGAAGCAGCGCGGCGGCGGTCCCGAGGAGATCCTCGCGATGATCTTCGGCGTGTGCTTCTTCGGCGCCTTCGTGCAGATCGTCCTCAGTCGTTTCCTCGGCCATCTTCGCCGGGTGATCACGCCGCTGGTCACCGGCATCGTCATCACCCTGATCGGCGTCAGCCTGATCAAGGTCGGCATCACCGACCTCGGCGGCGGAGCCGGGGCCACGGACTTCGGCGCACCGGCCAATCTCGCGCTGGGCGCGCTGGTGCTGCTGAGCATCGTCCTGCTGAACCGCTCGCGCCTGCCCTGGCTGCGCCTGGCCGCCATCGTCATCGGCCTGGCGCTGGGTACCCTGGCGGCCTGGGCGACCGGCCTGTTCGTTCCGCGGGCGTTGCCCGAGCTGCCGCTGGTCAGCCTGCCGCAGCCGTTCCGCTTCGGCTTCGCCTTCGACTGGATGGCCTTCCTGCCGGTGGCGCTGATCTACCTGATCAGCAGCATCGAGACGGTCGGCGATCTGACCGCCAACTGCATGCTCTCGCGGCAGCCCCTGGAGGGACCGGCGTACCTGCAGCGGTTGCGCGGCGGGGTGCTCGGCGACGGCGTCAGTTGCCTGCTGGCAGCCACCTTCAGCGCCTTCCCGAACACCACCTTCGCGCAGAACAACGGGGTGATCCAGCTCACCGGGGTGGCCAGCCGGCACGTCGGGATCTATATCGGCGGCGTGTTGCTGGCGCTCGGCCTGTTCCCCTGGGTCGGCGCGATCCTCCAGCAGATCCCCAAGCCGGTGCTCGGTGGCGCCACCCTGGTGATGTTCGGCAGCGTCGCCGCCGCCGGCATCCGCATTCTCGGCCAGACCGCGATGGACCGCCGCAGCGTGCTGATCATCGCCGCCTCGTTCGGCGTCGGCCTCGGCGTGGCCGCGCAGCCGACCCTGCTCGACCAGATGCCGGCGGTGGTGAAGACCCTGTTCGACTCGGCGATCACCAGCGGCGGCATCACCGCCATCCTGCTCAACCTGCTGCTGCCCGAGGAGCGCGTTGCCGAAGCGGCGCAGGCCAGCGCGAAGGGCGGCGCCCTGGCGCGCTGGCGCAAGCCGCTGGGTTGA MHSEDQRPNDLIYGLDDRPRPLPAFLAALQHVLASFVGIVTPPLVIGSLLGLGEHLPYLISMALMVSGAGTLIQARRPFGIGAGMICLQGTSFAFLGAVLAAGMLVKQRGGGPEEILAMIFGVCFFGAFVQIVLSRFLGHLRRVITPLVTGIVITLIGVSLIKVGITDLGGGAGATDFGAPANLALGALVLLSIVLLNRSRLPWLRLAAIVIGLALGTLAAWATGLFVPRALPELPLVSLPQPFRFGFAFDWMAFLPVALIYLISSIETVGDLTANCMLSRQPLEGPAYLQRLRGGVLGDGVSCLLAATFSAFPNTTFAQNNGVIQLTGVASRHVGIYIGGVLLALGLFPWVGAILQQIPKPVLGGATLVMFGSVAAAGIRILGQTAMDRRSVLIIAASFGVGLGVAAQPTLLDQMPAVVKTLFDSAITSGGITAILLNLLLPEERVAEAAQASAKGGALARWRKPLG Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0167 CDS 191697 192362 + probable transcriptional regulator Class 3 NP_248857.1 15595365 60% similar to putative regulator YcdC [Escherichia coli] PS01081: Bacterial regulatory proteins, tetR family signature Transcriptional regulators Unknown[Class 3] ; Unknown[Class 3] TIGR03613|RutR|pyrimidine utilization regulatory protein R|equivalog|5.7e-54||No Data|No Data PF08362|TetR_C_3, YcdC-like protein, C-terminal region|75|217|1e-55 COG1309|AcrR, Transcriptional regulator [Transcription]. ; COG1309|AcrR, Transcriptional regulator [Transcription]. ; COG1309|AcrR, Transcriptional regulator [Transcription]. ATGACCCTGACAGTGCCCGCCCACGACCCGGCCGCCCGCGACAAGCCGGCCGGGCGCATCCGCCAGAAGAACGAGGAGGCGATCCTCGCCGCGGCCGAGGAGGAGTTCGCCCGCCACGGCTTCAAGGGCACCAGCATGAACACCATCGCGCAGAACGTCGGCCTGCCCAAGGCCAACCTGCACTACTACTTCGGCAACAAGCTGGGCCTCTACACGGCGGTGCTGAGCAACATCCTCGAACTCTGGGACAGTACCTTCAACACCCTCGGCGTCGACGACGATCCGGCCGAGGCGCTGGCCCGCTACATCCGCGCCAAGATGGAGTTCTCCCGCCGCTACCCGCTGGCCTCGCGGATCTTCGCCATGGAGATCATCAGCGGCGGCGAGTGCCTCACCGCGCATTTCAACCAGGACTACCGCAGCTGGTTCCGCGGCCGCGCCGCGGTATTCGAGGCCTGGATCGCCGCCGGCCGGATGGACCCGGTGGATCCCGTGCACCTGATCTTCCTGCTCTGGGGCAGCACCCAGCACTACGCCGACTTCGCCAGCCAGATCGGCCTGGTCACCGGCCGCAAGCGCATGTCCAGGCAGGACTTCGCCGCCGCCGCCGACAACCTGGTGCGGATCATCCTCAAGGGCTGCGGACTGACCCCGCCGGCGGCCTGA MTLTVPAHDPAARDKPAGRIRQKNEEAILAAAEEEFARHGFKGTSMNTIAQNVGLPKANLHYYFGNKLGLYTAVLSNILELWDSTFNTLGVDDDPAEALARYIRAKMEFSRRYPLASRIFAMEIISGGECLTAHFNQDYRSWFRGRAAVFEAWIAAGRMDPVDPVHLIFLLWGSTQHYADFASQIGLVTGRKRMSRQDFAAAADNLVRIILKGCGLTPPAA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0168 CDS 192368 192958 + conserved hypothetical protein Class 4 NP_248858.1 15595366 yigZ 51% similar to hypothetical protein YigZ [Escherichia coli] PS00910: Uncharacterized protein family UPF0029 signature Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] TIGR00257|TIGR00257|conserved hypothetical protein TIGR00257|hypoth_equivalog|7.1e-29||Hypothetical proteins|Conserved PF09186|DUF1949, Domain of unknown function (DUF1949)|134|187|1e-05 COG1739|COG1739, Uncharacterized conserved protein [Function unknown]. ; COG1739|COG1739, Uncharacterized conserved protein [Function unknown]. ; COG1739|COG1739, Uncharacterized conserved protein [Function unknown]. ATGCCGAGCACCCTGCAAGGCCTCGCCGAATACCGCGAGGAAATCCGCAAGAGCCGCTTCCACACCATCGCCGCGCCGGTGGCCGACGAGGACGAGGCGCAGGCGTTCATCGCCGCCCACCGCGACGCTTCCGCCGGACACAACTGCTGGGCCTGGAAGTGCGGCGCGCAGTACCGCTTCAGCGACGACGGCGAACCCGGCGGCAGCGCCGGGCGGCCGATCCTGGCGGCCATCGAGGGACAGGACATGGACTGCGTGGCGGTGCTGGTCAGCCGCTGGTTCGGTGGCATCAAGCTCGGCACCGGCGGCCTCGCCCGCGCCTATGGCGGCGGCGCGGCCAAGTGCCTGCAGCAGGCGCCGCGCAGCGAGCTGGTCGAGCGCTGTCGGGTGCGCTTCGCCTGTGCCTTCGCCGACCACGCGCTGCTCAAGGCGCGCAGCCTGGCGCTGGGCGCCAGCGTGGCGGCCGAAGACTACGGCGCCGACGGCGTCGTCCTGACCCTGGAGTTGCCGGTGGCGCGCTTCGAGGCGCTTCAGGCGCTGCTGGTGGACCTCAGCCGAGGCCAGGTGCGGCCGCAGCGGCTGGACGCCTGA MPSTLQGLAEYREEIRKSRFHTIAAPVADEDEAQAFIAAHRDASAGHNCWAWKCGAQYRFSDDGEPGGSAGRPILAAIEGQDMDCVAVLVSRWFGGIKLGTGGLARAYGGGAAKCLQQAPRSELVERCRVRFACAFADHALLKARSLALGASVAAEDYGADGVVLTLELPVARFEALQALLVDLSRGQVRPQRLDA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0169 CDS 192965 193672 - hypothetical protein Class 4 NP_248859.1 15595367 PMID:16477007 63% similar to a region of hypothetical protein [Aquifex aeolicus] PF00990: GGDEF domain characteristic of diguanylate cyclases Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0009966|regulation of signal transduction|IEA ; molecular_function|GO:0009975|cyclase activity|IEA TIGR00254|GGDEF|diguanylate cyclase (GGDEF) domain|domain|3.6e-50||Regulatory functions | Signal transduction|Small molecule interactions | Other PF00990|GGDEF, GGDEF domain|60|216|5e-43 COG2199|COG2199, FOG: GGDEF domain [Signal transduction mechanisms]. ; COG2199|COG2199, FOG: GGDEF domain [Signal transduction mechanisms]. ; COG2199|COG2199, FOG: GGDEF domain [Signal transduction mechanisms]. GTGCGGCTGGAGCGCATCGCCCGGATCTCCGACGGTTTCCAGTCGATGGCGCGGGAGCAGAACCTGTCGCTGTCCGAGCGCTACCACAAGCAGCTGCGGCGCCTGGAAAAGGTGGCGCGGATCTCCGACCGCTACCAGCAGATGATGCGCGACCTCAACCTGGCGCTGAAGGAAGCCTCGATCCGCGACCCGCTGACCGGCCTGCCCAACCGACGCATGCTGCTGGAGCGCCTCAGGGAGGAGAACGAACGCTCCCAGCGCCACGGCCAGAGCTACGTGCTGGCAATGCTCGATGTGGACTTCTTCAAGCAGGTCAACGATACCTGGGGCCACGACAGCGGTGACCGGGTGCTGGTGGAAATCGCCCGGGCCATGGAGTCCGAGCTACGCGAATACGACCTCTGCGGCCGCTGGGGCGGCGAGGAATTCCTCCTGCTGCTGCCGCAGACCCGCCTGCAGGACGCCGGCCCGGTACTCGAGCGGGTGCGCGACAGCGTACGGACCCTGGCGGTACGCGTCGGCACCGAGGCGCTGAGCGTCACCGCCAGCGTCGGCGTTACCGAACACCGCATCGGCGAAACCTATTCGCAGACCGTCAATCGCGCCGACGCCGCACTGCTCGACGCCAAGCGCAGCGGCCGCGACAAATGCGTGTTCGCCGCGCTCCCGCCGCTTCCTGCCCCTTCCCGCCCGGCTCCAGCGCGCTGA MRLERIARISDGFQSMAREQNLSLSERYHKQLRRLEKVARISDRYQQMMRDLNLALKEASIRDPLTGLPNRRMLLERLREENERSQRHGQSYVLAMLDVDFFKQVNDTWGHDSGDRVLVEIARAMESELREYDLCGRWGGEEFLLLLPQTRLQDAGPVLERVRDSVRTLAVRVGTEALSVTASVGVTEHRIGETYSQTVNRADAALLDAKRSGRDKCVFAALPPLPAPSRPAPAR Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0170 CDS 193799 194179 - hypothetical protein Class 4 NP_248860.1 15595368 Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] PF09345|DUF1987, Domain of unknown function (DUF1987)|13|111|1e-34 ATGAGTGACCTGCACATACCCGGCACCCAGTCCACGCCCGCCATCCAGGGCGACTGGCAGGCCGGACGCCTGTCCATGCAAGGCGATTCCTACCCGGAAAACTCCTATGAACTGTTCGGCCAGGTGATCGACTGGGTCGAGCGCTTCCTCGCCGACGGGCAGCGGCCGCTGGAACTGGACCTGCGCCTGCTGTACCTGAACACCAGTTCGATCAAGGCCATGATGGACATCCTCGACCTGCTCGAAGAGGCCCACCAGGGCGGTCGCCCGGTCAGCCTGCGCTGGCACTACGACCGGCGCAACGAACGGGTCGCCGAGCTGGCCGAGGAGTTCCGCGAGGACTGCAGCTTCCCCTTCGCCATCCAGGCCCACGACGAGTAG MSDLHIPGTQSTPAIQGDWQAGRLSMQGDSYPENSYELFGQVIDWVERFLADGQRPLELDLRLLYLNTSSIKAMMDILDLLEEAHQGGRPVSLRWHYDRRNERVAELAEEFREDCSFPFAIQAHDE Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0171 CDS 194206 194748 - hypothetical protein Class 4 NP_248861.1 15595369 Involved in twitching motility PMID:15289561 ; PMID:12426335 Motility & Attachment Unknown[Class 3] ; Cytoplasmic[Class 3] ATGGAAACGCTAGACCTGCTGGCCATGCGTGAAAGCTACACCCGCCAACGCATCCTGCTCTGCTTCAACGGACCGATCTCGCGCAGCCTGATCGAGGAGATAGGCCACGCGCTGCGCAACTACCTGCACGCCGAACAGGCCAAGCCGAGCGAAGCGATGGACGTCTTCGCGGTGTACATCGAGATGACCCAGAACATCCGCCACTACGCCAATCTCAAGGGCTACGGCGAACACGAGGCGGCGGCCACGGTAGCCATCGCCCGCAACGAGGACGGCCACTACGTGGTGTCCGCCGGCAACCTGGTGGAACGCGACGACGGCCAGAGCCTGGTGCGCAGCATCCAGGCCATCGCCAACCTCGACAAGGCCGCCCTCAAGGCCGCCTACAAGGAGCAGCTACGCCGCCCGCGCGACAGCGGCTGCGCCAGCGGAGCCGGTCTCGGCCTGCTGGACATCGCCCGCAAGTCCAGCGAACCACTGGCCGCATCGCTGAAGGAACAGCCCGACGGGCGCGCCTTCTTCAGCCTGCGCGCCGTGATCTGA METLDLLAMRESYTRQRILLCFNGPISRSLIEEIGHALRNYLHAEQAKPSEAMDVFAVYIEMTQNIRHYANLKGYGEHEAAATVAIARNEDGHYVVSAGNLVERDDGQSLVRSIQAIANLDKAALKAAYKEQLRRPRDSGCASGAGLGLLDIARKSSEPLAASLKEQPDGRAFFSLRAVI Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0172 CDS 194757 196748 - hypothetical protein Class 4 NP_248862.1 15595370 PMID:15687295 45% similar to a region of hypothetical protein [Synechocystis sp.] 2 predicted transmembrane helices ; 2 predicted transmembrane helices (TMHMM v.2.0) Hypothetical, unclassified, unknown Unknown (This protein may have multiple localization sites)[Class 3] ; Unknown (This protein may have multiple localization sites)[Class 3] PF07228|SpoIIE, Stage II sporulation protein E (SpoIIE)|466|663|2e-23 COG2208|RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]. ; COG2208|RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]. ; COG2208|RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]. ATGGCGGCGAACTGGGGGTTGCGCGGCAAATCGGTGGTGGCGCTGTTGCTGGCCTGTGCCCTGGCACTGGTCCCGGCGGTGCTGCTGGGCTGGCGCGCGATGGACGACATCCGTACGCACTTCGGCCTGGCCTACGCGAAGAACTTCACCCTGCTGCACCGGCAGAAGATCCTCGCCCCGGTCTCCCGCGAACTGGCGTTGTCGCGCCGTTTCGCCGAATCGGTGGTGACCCGCGACTGGCTGCTGAAGGAAGACGACCCGGCGCGCCGCGCGCTGTTCTTCCGCGAGGCCGAGGGCTACCGCGGCGACTTCCGCGACCACGCCTACTTCATCATCGCCAGCGGCTCCCACCACTACTACTTCAACGACGGCCGCCAACCCTACAGCGAACGGCCGCGCTACACCCTGGAGGCCGGCGACCCGGAAGACGCCTGGTACTTCAATACCCTGCGCAACAGCGCCGCCTACAACATCAACGTCAATGTCGACAGCAAGCTGAACCTGACCAAGGTCTGGTTCAACCTGGTGATCCGCGACCAGGGCCGGCCCATCGGCCTGGCCGGCAGCGGCCTGGACCTGAGCGGCTTCCTCGACGACTTCATCATCGCCCGCGAGCCGGGCGTGACGCCGATGATCGTCGGCGACGACGGCGCCATCCAGGCCCACCCGGACCGCCGCCTGATCGCCTACAGCTCCGCCGCCGGCGGCGCCAGCGAACGCCACCGGGTGTTCGACCTGCTCGACCAGCCGGAACAGCGCGACGCCCTGCGCGAGGCCATGCGCCTGGCCCGCGCCAAGGCCGGCTCGGTGCACTGCCTGTGGGCCGGCCTCGACGGCCGCCAGCAACTCTTCGCCGTGGCCTACATTCCCCAACTGCGCTGGTACGTGCTCACCGCCGTCGACCTGCACGCCGCCCAGGTCCTCGACAACCGCTGGCTTTGGCCGCTGGCGGGCACGTTCCTGCTGTTGCTGGTGGCCCTGCTGCTGGGCTTCGCCTATGCCGTCGAGCGCCTGCTGTTGCGCCCCCTGCGCAGCCTCAAGCGCTCGGCCAAGGCGATCGCCGCCGGGCGCTACGACACGCCGCTGCCGCTGGCGCGCCAGGACGAGATCGGCTCGCTGTCGAAGGCCTTCGCCAGCATGGCCGACCAGGTCCGCCGGCACACCGCCGAGCTGGAAGACAAGGTCCAGGAGCGCACCCAGGCGCTGGAGGAAGCCAACCGCGAGATGGCCGCCGCGCAGAAGAAGATCGGCGACAGCCTCGACTATGCCAGCCTGATCCAGCGCGCGATCCTCCCCGACCGCCAGCTCAGCGCCACCCTCGGCGAGCATCACTTCATCCTGTGGAAACCGCGCGACGTGGTCGGCGGCGACTTCTACGTGTACCGCGAGCAGGCCGACGGCTACCTGATCGGCGTGGTCGACTGCGCCGGTCACGGCGTGCCCGGCGCGCTGATGACCATGCTCGCCCGCGCCGCCATCGACCACGCCATCGAGGCGGTGGGCAGCCGCGACCCGGCGGCGATCCTCGGCGAGACCGACCAGGCGATGCGCAGCATGCTCAGCCAGGAGCAGATCCCCCAGGCGCTGGCCACCAACATGGATGCCGGGCTGGTCTGGGTCGACCGCCGGCGCCGCCAGCTGGCCTTCGCCGGGGCGAAGATCTCGCTGTACGCCAGCGACGGCGAGGAGGTCCAGGAACTCAAGGGCGCGCGCCGGGCGATCGGCGACAAGCGCCGTGGCGACTACCGCAACATCGAGGTACCGCTGGCGCCGGGCTGGACCTTCTACCTGAGCACTGACGGTTTCCTCGACCAGGCCGGCGGCGAACACGGCTTCGGCTTCGGCAGCCGGCGCTTCGCCGACATGCTCCGCGACCACGCGCGGCAGCCGCTCCCCGAGCAGGCCGAGGCCTTCGTGGCGACGCTCGCCGAGTACCAGGGCGAGCACCCGCAACGCGACGACATCACCATCCTGTCCTTCCGATTCGACTAG MAANWGLRGKSVVALLLACALALVPAVLLGWRAMDDIRTHFGLAYAKNFTLLHRQKILAPVSRELALSRRFAESVVTRDWLLKEDDPARRALFFREAEGYRGDFRDHAYFIIASGSHHYYFNDGRQPYSERPRYTLEAGDPEDAWYFNTLRNSAAYNINVNVDSKLNLTKVWFNLVIRDQGRPIGLAGSGLDLSGFLDDFIIAREPGVTPMIVGDDGAIQAHPDRRLIAYSSAAGGASERHRVFDLLDQPEQRDALREAMRLARAKAGSVHCLWAGLDGRQQLFAVAYIPQLRWYVLTAVDLHAAQVLDNRWLWPLAGTFLLLLVALLLGFAYAVERLLLRPLRSLKRSAKAIAAGRYDTPLPLARQDEIGSLSKAFASMADQVRRHTAELEDKVQERTQALEEANREMAAAQKKIGDSLDYASLIQRAILPDRQLSATLGEHHFILWKPRDVVGGDFYVYREQADGYLIGVVDCAGHGVPGALMTMLARAAIDHAIEAVGSRDPAAILGETDQAMRSMLSQEQIPQALATNMDAGLVWVDRRRRQLAFAGAKISLYASDGEEVQELKGARRAIGDKRRGDYRNIEVPLAPGWTFYLSTDGFLDQAGGEHGFGFGSRRFADMLRDHARQPLPEQAEAFVATLAEYQGEHPQRDDITILSFRFD Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0173 CDS 197011 198060 - probable methylesterase Class 3 NP_248863.1 15595371 response regulator for chemotaxis PMID:88165060 ; PMID:86085665 ; PMID:3510184 ; PMID:3280143 chemotaxis operon 76% similar to response regulator (CheB) for chemotaxis protein [Escherichia coli] PF00072: Response regulator receiver domain ; PF01339: CheB methylesterase Chemotaxis [PseudoCAP] ; Chemotactic transducer (MCP) [PseudoCAP] 3.1.1.61 Adaptation, Protection ; Chemotaxis Cytoplasmic[Class 2] ; Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0000160|two-component signal transduction system (phosphorelay)|IEA ; biological_process|GO:0006355|regulation of transcription, DNA-dependent|IEA ; biological_process|GO:0030436|asexual sporulation|IEA ; biological_process|GO:0042173|regulation of sporulation resulting in formation of a cellular spore|IEA ; molecular_function|GO:0000156|two-component response regulator activity|IEA TIGR02875|spore_0_A|sporulation transcription factor Spo0A|equivalog|6.8e-09||Cellular processes|Sporulation and germination PF00072|Response_reg, Response regulator receiver domain|5|107|2e-17 COG2201|CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [Cell motility and secretion / Signal transduction mechanisms]. ; COG2201|CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [Cell motility and secretion / Signal transduction mechanisms]. ; COG2201|CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [Cell motility and secretion / Signal transduction mechanisms]. ATGCCCATCAGTGTCCTGGTCGTCGACGATTCCGCCCTGATCCGCAGCCTGCTCAAGGAGATCATCCAGGCCGACCCGGAGCTGCGCCTGGTCGGCTGCGCGCCGGACGCCTTCGTCGCCCGCGACCTGATCAAGCAGCACGCGCCGGACGTGATCAGCCTCGACGTGGAAATGCCGCGAATGGACGGCCTGACCTTCCTCGACAAGCTGATGAAGGCGCGGCCGACCCCGGTGCTGATGATCTCCTCGCTCACCGAGCGCGGTTCCGAAGCCACCCTGCGCGCGCTGGAACTGGGCGCGGTGGACTTCATCGCCAAGCCCCGGCTGGGCATCGCCGAAGGCATGCAGGCCTATGCCGAGGAAATCCGCGCCAAGCTCAAGACCGTCGCCCGCGCCCGCCTGCGCCGCCGTGCGGCGGACGCGCCGGCGCCGCCGGAAAGCGCGGCGCCGCTGCTCAGCACCGAGAAGATCATCGCCCTCGGCGCCTCCACCGGCGGCACCGAGGCGCTCAAGGAAGTGCTGCTCGGCCTGCCGGCGCACAGTCCCGGGGTGGTCATCACCCAGCACATGCCTCCCGGCTTCACCCGCAGCTTCGCCGAGCGCCTGGATCGCCTGACCCGGCTCAGCGTCAGCGAAGCGCGCGACGGCGACCGCATACTGCCCGGCCACGCCCTGGTCGCGCCGGGCGACCACCACATGGAGGTGCAGCGCTCCGGCGCCAACTACGTGGTGCGTTTGAACCGCCAGGCGCAGGTCAACGGCCACCGCCCGGCAGTGGACGTGATGTTCGAGTCGCTGGCTCGCTGCGCCGGGCGCAACCTGCTCGCCGGCCTGCTCACCGGCATGGGCAAGGACGGCGCGCGCGGGCTCCTGGCGATCCGCCAGGCCGGCGGCTACACCCTGGCCCAGGACGAGGCTACCTGCGTGGTCTACGGCATGCCCCGCGAAGCGGTGGAACTGGGCGCCGCGGAAGACGTGCTGCCGCTCGAACGGATCGCCGCCGCGCTGCTCCAGCAAGCCGCCCGGCGCGGCAGCGGCAACCGCCTCTGA MPISVLVVDDSALIRSLLKEIIQADPELRLVGCAPDAFVARDLIKQHAPDVISLDVEMPRMDGLTFLDKLMKARPTPVLMISSLTERGSEATLRALELGAVDFIAKPRLGIAEGMQAYAEEIRAKLKTVARARLRRRAADAPAPPESAAPLLSTEKIIALGASTGGTEALKEVLLGLPAHSPGVVITQHMPPGFTRSFAERLDRLTRLSVSEARDGDRILPGHALVAPGDHHMEVQRSGANYVVRLNRQAQVNGHRPAVDVMFESLARCAGRNLLAGLLTGMGKDGARGLLAIRQAGGYTLAQDEATCVVYGMPREAVELGAAEDVLPLERIAAALLQQAARRGSGNRL Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0174 CDS 198080 198682 - conserved hypothetical protein Class 4 NP_248864.1 15595372 PMID:95349401 ; PMID:7623670 chemotaxis operon 62% similar to conserved hypothetical protein [Borrelia burgdorferi] Chemotaxis [PseudoCAP] Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] PF03975|CheD, CheD|66|171|7e-39 COG1871|CheD, Chemotaxis protein; stimulates methylation of MCP proteins [Cell motility and secretion / Signal transduction mechanisms]. ; COG1871|CheD, Chemotaxis protein; stimulates methylation of MCP proteins [Cell motility and secretion / Signal transduction mechanisms]. ; COG1871|CheD, Chemotaxis protein; stimulates methylation of MCP proteins [Cell motility and secretion / Signal transduction mechanisms]. ATGAATCTCCAGGCCCGGGAAGGCGCGCCGCTGAACCGCTACTACGATCCGTACTTCGCCTGCGATGCGGTGAAGCTGTTGCCCGGCGAATACTTCGCCAGCGGCGAAGACCTGGTGATCGTCACCGTGCTCGGCTCCTGCGTCTCGGTGTGCCTGCGCGACCCGCTCAACGGCATCGCCGGGATGAACCACTTCATGCTCCCCGAGCGCGGCCTCGGCGGCGACCCGGCCTCGCCGTCGGCGCGCTACGGCAGCCACGCCATGGAACTGCTGATCAACCGCATGCTGGCCCTCGGCGCCAGCCGCGAGCGCCTGCAGGCCAAGGTCTTCGGCGGCGGCTCGGTACTGCGCCAGATCAGCGCCGCCATCGGCCAGCGCAACGTCGAGTTCACCCTCGACTACCTGGCCACCGAGCGTATCCCGCTGCTCGCCAGCGACGTGCTGGAGGCCTTCCCGCGCAAGATCTACTTCTTCCCGCGCAATGGCCGGGTCCTGGTGAAGTCCCTGGTGGAGCTGAAGAACGACACCGTGCTGCAGCGTGAACGCGACTACCGCCGCCGTATCGACCGCAACGCGGACGGCGGCCCCATCGACCTGTTCTGA MNLQAREGAPLNRYYDPYFACDAVKLLPGEYFASGEDLVIVTVLGSCVSVCLRDPLNGIAGMNHFMLPERGLGGDPASPSARYGSHAMELLINRMLALGASRERLQAKVFGGGSVLRQISAAIGQRNVEFTLDYLATERIPLLASDVLEAFPRKIYFFPRNGRVLVKSLVELKNDTVLQRERDYRRRIDRNADGGPIDLF Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0175 CDS 198688 199530 - probable chemotaxis protein methyltransferase Class 3 NP_248865.1 15595373 cheR2 PMID:87250466 ; PMID:3298235 chemotaxis operon 68% similar to methyltransferase CheR [Salmonella typhimurium] PR00996: Glutamate methyltransferase Two-component System [PseudoCAP] ; Chemotaxis [PseudoCAP] 2.1.1.80 Transcriptional regulators ; Adaptation, Protection ; Chemotaxis Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] PF01739|CheR, CheR methyltransferase, SAM binding domain|85|277|1e-55 COG1352|CheR, Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms]. ; COG1352|CheR, Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms]. ; COG1352|CheR, Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms]. ATGCCCACCTCCACGCCTTCGCCGGTGTTCGGCAACCAGGAGTTCCACTACACCCGCGAGGACTTCCAGCAAGTACGCGAGCGGCTCTACCGGCTGACCGGCATCAGCCTGGCCGAGAGCAAGGCGCAACTGGTCTATAGCCGCCTCTCGCGGCGCCTGCGCCTGCTGCGGCTCGGGAGCTTCGCCGAATATTTCACCCACCTCGACCGCGAGCCGGGCGAGCAGCAGTTGTTCGTCAACGCGCTGACCACCAACCTCACCGCATTCTTCCGCGAACGCCACCACTTCCCCCTGCTCGCCGACCTCGCCCGCCGCCAGTTGCAGCGGCATCGCCCGCTGCGCATCTGGTCGGCGGCGGCGAGTACCGGCGAGGAACCCTATTCGATCGCCATCACCCTGGTGGAGGCGCTGGGCAGCTTCGATCCGCCGGTGAAGATCGTCGCCTCGGACATCGATACCGGGGTGCTCGACTGCGCCCGCCAGGGCGTCTATCCGCTGGAGCGCCTGGAGCAGATGCCGGCGCCGCTGAAGAAACGCTTCTTCCTCCGCGGCACTGGGCCCAACGCCGGCAAGGCGCGGGTGGTGGAGGAACTGCGGCAACTGGTGGAGTTCCGCCAGATCAACCTGCTGGAGGCAGACTGGTCGATCGCCGGGGAACTCGACGCGATCTTCTGCCGCAACGTGATGATCTACTTCGACAAGCCGACCCAGACCCGCCTGCTGGAACGCATGGTGGCCCTGCTGCGGCCGGAGGGCCTGTTCTTCGCCGGGCATTCGGAGAACTTCGTCCACGCCAGCCACCTGGTGCGCTCCGTCGGCCAGACCGTCTACAGCCCGGCCTGA MPTSTPSPVFGNQEFHYTREDFQQVRERLYRLTGISLAESKAQLVYSRLSRRLRLLRLGSFAEYFTHLDREPGEQQLFVNALTTNLTAFFRERHHFPLLADLARRQLQRHRPLRIWSAAASTGEEPYSIAITLVEALGSFDPPVKIVASDIDTGVLDCARQGVYPLERLEQMPAPLKKRFFLRGTGPNAGKARVVEELRQLVEFRQINLLEADWSIAGELDAIFCRNVMIYFDKPTQTRLLERMVALLRPEGLFFAGHSENFVHASHLVRSVGQTVYSPA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0176 CDS 199600 201639 - aer2 aerotaxis transducer Aer2 Class 1 NP_248866.1 15595374 methyl-accepting chemotaxis protein PMID:91236753 ; PMID:15687221 ; PMID:16233612 ; PMID:14987771 ; PMID:2033064 chemotaxis operon ; Expression is dependent on the alternative sigma factor RpoS. aer2 is transcribed together with cheY2A2W2. 72% similar to C terminus of methyl-accepting chemotaxis protein (MCP1)I, serine sensor receptor [Escherichia coli] BL00538: Bacterial chemotaxis sensory transducers signature Chemotaxis [PseudoCAP] ; Chemotactic transducer (MCP) [PseudoCAP] Adaptation, Protection ; Chemotaxis Cytoplasmic[Class 2] ; Cytoplasmic Membrane[Class 3] ; Unknown (This protein may have multiple localization sites)[Class 3] PF00015|MCPsignal, Methyl-accepting chemotaxis protein (MCP) signaling domain|413|634|7e-60 COG0840|Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]. ; COG0840|Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]. ; COG0840|Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]. ATGGGTCTGTTCAATGCACATGCGGTGGCGCAGCAACGCGCCGACCGGATCGCCACGCTCCTCCAGTCGTTCGCCGACGGCCAGCTCGACACCGCCGTCGGCGAGGCCCCGGCGCCCGGCTACGAGCGTCTCTACGACAGCCTGCGGGCGCTGCAGCGGCAACTGCGCGAACAACGCGCCGAACTCCAGCAGGTGGAAAGCCTGGAGGCGGGGCTGGCGGAGATGAGCCGCCAGCACGAAGCCGGCTGGATCGACCAGACGATTCCCGCCGAACGCCTGGAAGGTCGCGCGGCGCGCATCGCCAAGGGCGTCAACGAACTGGTGGCCGCGCACATCGCGGTGAAGATGAAGGTGGTCAGCGTGGTCACCGCCTACGGCCAGGGCAACTTCGAGCCGCTGATGGACCGCCTGCCGGGCAAGAAGGCGCAGATCACCGAAGCCATCGACGGCGTTCGCGAACGCCTGCGCGGGGCCGCCGAGGCGACCTCGGCGCAACTGGCCACGGCGGCCTACAACGCGCGGATCAAGAGCGCGCTGGACAACGTCTCGGCCAACGTGATGATCGCCGACAACGATCTCAACATCATCTACATGAACCGCACCGTCAGCGAGATGCTCGGTCGCGCCGAAGCGGATATCCGCAAGCAACTGCCGAACTTCGACGCCGGCCGCCTGATGGGCGCCAACATCGACGTGTTCCACAAGAATCCGGCGCACCAGCGGCACCTGCTGGCCAACCTCACCGGCGTGCACAAGGCCGAGCTCAACCTCGGCGGCCGGCGCTTCTCCCTCGACGTGGTGCCAGTGTTCAACGACGCCAACGAACGCCTCGGCTCCGCCGTGCAATGGACCGACCGCACCGAGGAACACCGCGCCGAGCAGGAAGTCTCGCAACTGGTGCAGGCGGCGGCCGCCGGCGACTTCAGCAAGCGCGTCGAGGAGGCCGGCAAGGAAGGCTTCTTCCTCAGGCTGGCGAAGGACCTGAACAGCCTGGTGGATACCGCCGACCGCGGCTTGCGCGACGTCTCGCGGATGCTCGGGGCGCTGGCCCAGGGCGACCTCACCCAGCGCATCGAGGCCGACTACCAGGGCACCTTCGGCCAGCTCAAGGATTTCTCCAACGACACCGCACAAAGCCTGTCGCGGATGCTCGGGCAGATTCGCGAGGCCGCCGACACCATCAACACCGCCGCCAGCGAGATCGCCAGCGGCAACGCCGAACTGTCGGCGCGCACCGAGCAGCAGGCGTCGAGCCTGGAGGAAACCGCCTCGAGCATGGAAGAACTGACCAGCACGGTGAAGCTCAACGCCGAGAATGCCCGCCAGGCCAACTCGCTGGCGGCCAATGCCTCGGAAGTGGCGACCCAGGGCGGCACCGTGGTGCAGAAGGTGGTCAGCACCATGTCCTCGATCAACGAGTCGGCGCGCAAGATCGCCGACATCATCGGGGTGATCGACGGCATCGCCTTCCAGACCAACATCCTCGCCCTCAACGCCGCGGTCGAGGCAGCCCGCGCCGGCGAGCAGGGCCGCGGCTTCGCGGTGGTCGCCGGGGAAGTGCGCACCCTCGCCCAGCGTTCCGCCGCCGCGGCCAAGGAGATCAAGACGCTGATCTCCGACTCGGTGGACAAGGTGGAGAACGGCAACACCCTGGTGGCCCAGGCCGGACAGACCATGAGCGACATCGTGGTAGCGATCCGCCGGGTCACCGACATCATGTCGGAGATCGCCGCCGCCTCCGCCGAGCAGAGCACCGGCATCGAAGAGGTGAACAGCGCGGTCTCGCAGATGGACGACATGACCCAGCAGAACGCCGCGCTGGTGGAGGAAGCCGCGGCCGCGGCCGAGGCCATGCAGGAGCAGGCGGGCCTGCTCAACCAGTCGGTGGCGGTGTTCAGGCTGGACACTCCGCCGAGCGTGGTCCAGCTCGCCAGCGCGCGGCCGTCCGCGCCACGCCCCAGCGCGCCGGCGCCGCTGGCCCGCAGCGGCATGGCGCGGGCCAGCAAGGCGCGCAAGGAAGACGGCTGGGAAGAGTTCTGA MGLFNAHAVAQQRADRIATLLQSFADGQLDTAVGEAPAPGYERLYDSLRALQRQLREQRAELQQVESLEAGLAEMSRQHEAGWIDQTIPAERLEGRAARIAKGVNELVAAHIAVKMKVVSVVTAYGQGNFEPLMDRLPGKKAQITEAIDGVRERLRGAAEATSAQLATAAYNARIKSALDNVSANVMIADNDLNIIYMNRTVSEMLGRAEADIRKQLPNFDAGRLMGANIDVFHKNPAHQRHLLANLTGVHKAELNLGGRRFSLDVVPVFNDANERLGSAVQWTDRTEEHRAEQEVSQLVQAAAAGDFSKRVEEAGKEGFFLRLAKDLNSLVDTADRGLRDVSRMLGALAQGDLTQRIEADYQGTFGQLKDFSNDTAQSLSRMLGQIREAADTINTAASEIASGNAELSARTEQQASSLEETASSMEELTSTVKLNAENARQANSLAANASEVATQGGTVVQKVVSTMSSINESARKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRSAAAAKEIKTLISDSVDKVENGNTLVAQAGQTMSDIVVAIRRVTDIMSEIAAASAEQSTGIEEVNSAVSQMDDMTQQNAALVEEAAAAAEAMQEQAGLLNQSVAVFRLDTPPSVVQLASARPSAPRPSAPAPLARSGMARASKARKEDGWEEF Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0177 CDS 201675 202160 - probable purine-binding chemotaxis protein Class 3 NP_248867.1 15595375 PMID:91296802 ; PMID:2068106 chemotaxis operon 78% similar to Chemotaxis protein CheW [Escherichia coli] DM01794: CHEMOTAXIS CHEW PROTEIN Chemotaxis [PseudoCAP] Adaptation, Protection ; Chemotaxis Cytoplasmic[Class 2] ; Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] PF01584|CheW, CheW-like domain|16|152|5e-29 COG0835|CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms]. ; COG0835|CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms]. ; COG0835|CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms]. ATGAACGGCACTGAGGCAAGCCAGGCGAACGGCCCGGCGCAGGAATACCTGACCTTCACCCTGGGCCGCGAGGAGTACGCCATCGACATCCTCCGCGTGCAGGAGATCCGCGGCTACGACCAGGTCACCGCGATCGCCAACGCGCCGCCCTTCATCAAGGGCGTGATCAACCTGCGCGGGGCGATCGTGCCGATCGTCGACCTGCGCATCAAGTTCCACCTCGCCGAGGTCACCTACGACCCGTTCACCGTGGTGATCATCCTCAACATCGGCCGGCGCATCGTCGGCGTGGTGGTGGACTCGGTATCCGACGTGATCGCACTGGGCGGCGACGCGATCAGGCCGCCGCCGGAGTTCGGCGCCAGCTTCGACACCGAATACCTGCTCGGCCTGGCCACCGCGGGCGAGCGCATGTTGATCCTGGTGGACATCGAGAGACTGATGACCAGCCGCGAAATGGCGCTGGTCGACGAAGCCGCGGCCTGA MNGTEASQANGPAQEYLTFTLGREEYAIDILRVQEIRGYDQVTAIANAPPFIKGVINLRGAIVPIVDLRIKFHLAEVTYDPFTVVIILNIGRRIVGVVVDSVSDVIALGGDAIRPPPEFGASFDTEYLLGLATAGERMLILVDIERLMTSREMALVDEAAA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0178 CDS 202147 204066 - probable two-component sensor Class 3 NP_248868.1 15595376 probable chemotaxis protein sensory transduction histidine kinase PMID:99142610 ; PMID:88144445 ; PMID:3278311 ; PMID:9989504 chemotaxis operon 60% similar to chemotaxis protein cheA [Salmonella typhimurium] PR00344: BACTERIAL SENSOR PROTEIN C-TERMINAL SIGNATURE Two-component System [PseudoCAP] ; Chemotaxis [PseudoCAP] 2.7.3.- Chemotaxis ; Adaptation, Protection ; Two-component regulatory systems Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] PF01584|CheW, CheW-like domain|498|630|3e-22 COG0643|CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms]. ; COG0643|CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms]. ; COG0643|CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms]. ATGCCCCAGGATATGAGCCAGTTTCTCCAGGTGTTCTTCGAGGAAACCGAGGAACACCTGGCCACCCTCGAACTCCTCCTGATCGGTCTCGACCTGGACCGGCCGGACAGCGAGACGCTGCACGGCATCTTCCGCGCCGCGCATTCGATCAAGGGTTCCAGCGGAATGTTCGGTTTCGACGACATCACCGCCGTCACCCACGAACTGGAGACCCTGCTCGACCGCATCCGCTGCGGCCAGATGCACCTGCGGCCGGACATGATCAGTTCCTTCCTCGAAGCCCGCGACGTGTTGCAGCGCCTGCTCGACGCCCATCGCAGCGGCCGTCCCGACCCCGGGGTGCCGTTGCTGGAGACGGTCGAGCGGCTGCGCGGCTGGCTGCGGGTGCCGGAGCAGGAAGCGGCGGAGGAAGGCTTCGGCCTGTTCGACGACGCGCCCGCCAGGGAAACCGCGGACGACGATGCCTTCGGCTTCTTCGACGAAGGCCCGGGCGCTCCGGAACGAGCGGCCGCGCCGGAAGCGTTCGGGCTCTTCGACGAGGCGCCCGGCGCACCGGCCGCGAGCGAAGCGTTCGGCCTCTTCGATGAGGCACCGGGTTCCCCACCGGCGGAGGAACGCGCCTTCGGCCTGTTCGACGGCGCCCCCGGCAGCCCCGCCGCGCCCAGTGCGCCCGCGCAAGCCGTCGCCGCGCCGGCCAGGGGCGCAGTCGCGCCCGTGCGTGGCGACGGCGAGTCCGGCTCGATCCGGGTCAGCGTGGAAAAGATCGACAGCCTGATCAACCTGGTCGGCGAACTGGTGATCACCCAGGCCATGCTCGGCCAGCTCGGCGAGCAGCTCGACCCGAGCCGCCACGAGCGCCTGCAGCACGCCCTGGCCCAGCTCGAACACAACACCCGCGACCTGCAGGAGTCGGTGATGTCGATCCGCATGCTGCCGATCAACTTCATCTTCAGCCGCTTCCCCAGGCTGGTGCGCGACACCGCCACGCGCCTGGGCAAGCAGGTCGAGCTGCACCTGCACGGCGAGCACACCGAACTGGACAAGAGCGTGATCGAGAAACTCAGCGATCCGCTCACCCACATCGTCCGCAACAGCATCGACCACGGCATCGAAACGCCCGCCGAACGCCTCGCCGCCGGCAAGCCGGCGAGCGGCACGGTGAAGCTCGCCGCCAGCCACCAGGGCGGCAGCGTGGTGGTGGAGGTTTCCGACGACGGTCGCGGCCTGTCGCGTCCACGCATCCTCGCCAAGGCCCGCGAGCGCAACCTGCCGGTGCATGACGGGATGAGCGACGCCGAGGTCTGGCAACTGGTGTTCATGCCCGGCTTCTCCACCGCCGAGACGGTCACCGAGCTGTCCGGACGCGGCGTCGGCATGGACGTGGTGAAGCGCAACATCGGTGCCATGGGCGGGCGCATCGACATCGACTCGGCGCCCGGCATGGGCACTCGCATCGGCATCCGCCTGCCGCTGACCCTGGCGATCCTCGACGGCCTGATCGTCGCCGTCGAAGCGGTCAACTACGTGATTCCGCTGACCTACATCGTCGAGTCGCTGCAGGCGCGCAGCGACGACGTGCGCGGCCTCGGCGGCGAAGACAACGCGATGATCCGCGTACGCGGCGAGTACCTGCCGCTGTTCAGCCTGCACGAGCTGTTGCGCATCGGCGGCGAAGCGCCGGCGCCGGAGCAGGGCATCGTGGTGATCCTCGAGTCCGAGGGGCGCAGCTTCGCCCTGCAGGTGGACGAACTGGTCGGCCAGCAGCAGGTGGTGATCAAGAGCCTGGAACAGAATTTCCGCCGCGTGGAGGGTATCGCCGGCGCCACCATCATGGGCGACGGCAGCGTCGCCCTGATTCTCGACGTCGATGCGCTGCCACGCCTGGCGGCGCGGGAGGACACCGCCGATGAACGGCACTGA MPQDMSQFLQVFFEETEEHLATLELLLIGLDLDRPDSETLHGIFRAAHSIKGSSGMFGFDDITAVTHELETLLDRIRCGQMHLRPDMISSFLEARDVLQRLLDAHRSGRPDPGVPLLETVERLRGWLRVPEQEAAEEGFGLFDDAPARETADDDAFGFFDEGPGAPERAAAPEAFGLFDEAPGAPAASEAFGLFDEAPGSPPAEERAFGLFDGAPGSPAAPSAPAQAVAAPARGAVAPVRGDGESGSIRVSVEKIDSLINLVGELVITQAMLGQLGEQLDPSRHERLQHALAQLEHNTRDLQESVMSIRMLPINFIFSRFPRLVRDTATRLGKQVELHLHGEHTELDKSVIEKLSDPLTHIVRNSIDHGIETPAERLAAGKPASGTVKLAASHQGGSVVVEVSDDGRGLSRPRILAKARERNLPVHDGMSDAEVWQLVFMPGFSTAETVTELSGRGVGMDVVKRNIGAMGGRIDIDSAPGMGTRIGIRLPLTLAILDGLIVAVEAVNYVIPLTYIVESLQARSDDVRGLGGEDNAMIRVRGEYLPLFSLHELLRIGGEAPAPEQGIVVILESEGRSFALQVDELVGQQQVVIKSLEQNFRRVEGIAGATIMGDGSVALILDVDALPRLAAREDTADERH Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0179 CDS 204094 204459 - probable two-component response regulator Class 3 NP_248869.1 15595377 probable chemotaxis response regulator PMID:95349401 ; PMID:96312364 ; PMID:7623670 ; PMID:8763950 chemotaxis operon 65% similar to CheY1 [Rhizobium meliloti] ; 61% similar to cheY peptide [Escherichia coli] ; 69% similar to chemotaxis response regulator [Rhodobacter sphaeroides] PF00072: Response regulator receiver domain ; PF00486: Transcriptional regulatory protein, C terminal Two-component System [PseudoCAP] ; Chemotaxis [PseudoCAP] Chemotaxis ; Adaptation, Protection ; Two-component regulatory systems Cytoplasmic[Class 2] ; Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0000160|two-component signal transduction system (phosphorelay)|IEA ; biological_process|GO:0006355|regulation of transcription, DNA-dependent|IEA ; biological_process|GO:0006796|phosphate metabolic process|IEA ; molecular_function|GO:0000156|two-component response regulator activity|IEA ; molecular_function|GO:0003700|transcription factor activity|IEA TIGR02154|PhoB|phosphate regulon transcriptional regulatory protein PhoB|equivalog|1.6e-07||Regulatory functions | Signal transduction|DNA interactions | Two-component systems PF00072|Response_reg, Response regulator receiver domain|5|114|8e-27 COG0745|OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]. ; COG0745|OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]. ; COG0745|OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]. ATGGGCAAACCGATTCTGATCGTCGACGACTCGGCGTCTATCCGCCAGATGCTGAGCTTCACCCTGAAGTCCGCCGGCTACGAGGTGGACGAGGCCGCGGACGGCAAGGAAGGCCTCGGCAAGGCCCAGAGCAAGAGCTACAGCCTGGTGTTCACCGACCAGAACATGCCGAACATGGACGGCCTGTCGCTGATCCGCAGCCTGCGTAACCTGGCCGGCTACCGCAGCGTGCCGATCCTCATGCTGACCACCGAATCGAGCGACGCGATGAAGCAGCAGGGACGCAGCGCCGGCGCCACCGGCTGGCTGGTGAAGCCGTTCGACCCGCCGAAACTGCTCGAAGTGACGCGCAAGGTCCTGCCCTGA MGKPILIVDDSASIRQMLSFTLKSAGYEVDEAADGKEGLGKAQSKSYSLVFTDQNMPNMDGLSLIRSLRNLAGYRSVPILMLTTESSDAMKQQGRSAGATGWLVKPFDPPKLLEVTRKVLP Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0180 CDS 204657 205829 - probable chemotaxis transducer Class 3 NP_248870.1 15595378 PMID:97334134 ; PMID:15687295 ; PMID:9190831 chemotaxis operon 43% similar to C-terminus of aerotaxis sensor receptor [Escherichia coli] BL00538: Bacterial chemotaxis sensory transducers signature ; 1 predicted transmembrane helices (TMHMM v.2.0) Chemotaxis [PseudoCAP] ; Chemotactic transducer (MCP) [PseudoCAP] Adaptation, Protection ; Chemotaxis Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] PF00015|MCPsignal, Methyl-accepting chemotaxis protein (MCP) signaling domain|173|265|1e-17 COG0840|Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]. ; COG0840|Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]. ; COG0840|Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]. ATGCGCGAGTCCCTCGGTGTTTCGTTACCATCCCGGCCCCTGCTGCTGAAGCTGGGCCTGCTTTCCCTACCCTGGGCGTTGTGCGCCGGGCTGCATGCCGTCGGCCTCGGCGTCTGGCTGGTCCTGGCGCTCGGTTGGTTCGCCAGCCTGGCCATGCTCGTCCTCCTCCTGCGCGCCCCTCGGCAAGCGGTAGCGAATGCCAACCCGCAGGCGGATGCCGCTTCGCCGGCCTGGAGCGCGGCGCAACGGGCGCTCGCCGACGAAACCGCGCAACTGGACGGTCACGCCCGGCAGATCGACGAACTGCTGCATTCGGCGATCCGCCAGCTCAGCGACAGCTTCCACGGCCTCGCCGAACGCATCGATACCCAGCGCGGCCTGTCCCATTCGCTGATCGAGCGCTACGACGGGCGCGGCCAGGTCGACGAAGGCATCAACTTCCAGGACTTCGTCAGGACCACCCAGCAGACCCTCAGCCTGTTCGTCGAGGCTACCCTGGAAACCAGCCGGACCTCGCAGCAACTGGTGGAACGCATGGACCAGGTGCGGCTGAAGATCACCGAGATCCTGCAGTCGACCCAGGACATGGACGCCATCGCCAAGCAGACCAACCTGCTCGCCCTCAACGCCGCCATCGAGGCCGCCCGAGCCGGCGAGAGCGGCCGCGGCTTCGCCGTGGTCGCCGATGAAGTGCGCGCGCTGTCGACCCGCTCCACGGAGTTTTCCGCCGCCATCCGCAAGCACGTCGACGTGGTCCACCACGAGATCCAGGACGCCGAGAGCGCGATCTCGCAACTGGCCGACAAGGACATGTCCTTCGCCCTCGATTCCAAGCACAAGATCCAGGGCATGCTCGATGACCTGGAGGCGATGAACCGGCACACCCTGAAGGTCATCCACGAACTGGACCGGCTCTCGCTGGAAGTCGGCCAGGGCGTCGACGCGGCGGTCACCGCCCTGCAATTCCAGGACATGGGCAGCCAGTTGCTCGGCCAGATGCGCAAGCACCATGCGCGTCTTGGCGCCTTCGCCCTCGGCCTCGGCGCGCTGGAGGCGCGGCCGCGCCAGGAATGGCCCGAACGGGTCGCGCGGGAGGTCGAGGAACTGCGCCGGCCCTTGCCCAGCCCGGTGAGCCAGAACAGCGTCAACGTGGGCGAAGTGGAATTGTTCTGA MRESLGVSLPSRPLLLKLGLLSLPWALCAGLHAVGLGVWLVLALGWFASLAMLVLLLRAPRQAVANANPQADAASPAWSAAQRALADETAQLDGHARQIDELLHSAIRQLSDSFHGLAERIDTQRGLSHSLIERYDGRGQVDEGINFQDFVRTTQQTLSLFVEATLETSRTSQQLVERMDQVRLKITEILQSTQDMDAIAKQTNLLALNAAIEAARAGESGRGFAVVADEVRALSTRSTEFSAAIRKHVDVVHHEIQDAESAISQLADKDMSFALDSKHKIQGMLDDLEAMNRHTLKVIHELDRLSLEVGQGVDAAVTALQFQDMGSQLLGQMRKHHARLGAFALGLGALEARPRQEWPERVAREVEELRRPLPSPVSQNSVNVGEVELF Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0181 CDS 206022 206954 - probable transcriptional regulator Class 3 NP_248871.1 15595379 48% similar to putative transcriptional regulator YeaT [Escherichia coli] PS00044: Bacterial regulatory proteins, lysR family signature Transcriptional regulators Cytoplasmic[Class 2] ; Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] TIGR03418|chol_sulf_TF|putative choline sulfate-utilization transcription factor|hypoth_equivalog|6.5e-10||No Data|No Data PF00126|HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family|4|62|3e-16 COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription]. ATGGAAACCCTCAGCAACATCCAGTGCTTCGTCCGCAGCGCCGAGGCCGGTAGCTTCGCCGAGGCCGCCAGGCGCCTGGGCCTGACGCCGGCCGGGGTGGGCAAGAACGTCGCCCGCCTGGAAAGCAACCTCGGCGTGCGCCTGTTCCAGCGCAGCACCCGGCGCCTGACCCTGACCGAAGCCGGGGAGCGTTTCCTGCAAGAGGTCGGCGGCAGCCTGGAGGGCATCCAGACCGCTCTCGCCAACGTCTCCAGCGTCGGCAACCAACCCAGCGGCACGTTGAAGGTCAGCATGGGGCTGGCCTTCGGCCGCGACTACATCCTGCCGCTGCTCGGCGAGTTCCTCGAACGCTATCCCGACATCGTGCCCGACTGGCATTTCGACAATCGCCAGGTGGACCTCATCGGCGAAGGCTTCGACGCCGCCATCGGCGGCGGTTTCGAACTGCCTCCCGGGGTGGTGGCGCGCAACCTGACGCCGGGCCACCTGATCCTCCTCGCCTCGCCCACCTACCTCCGCGACAAGCCGCCAATCCGCCATCCAGGCGACCTGGGCGGCTTCGACGGGATCCGCATCCGCTCGCCGCAGACCGGCCGCGTGCGCTCCTGGCCGCTGCGCCGGCGCAACGGCGAGGAGGCGCCGATCGAGCTGCGCGAACGCATGACCATGAGCGACCCGGAAGCCACCTGCGAGGTCGCCGCCATGGGCCTGGGCATCACCCTGGTATGCATGCAGCACGCCTATGCCTACCTGGAGTCCGGCGCCCTGGTGCGGGTCCTGCCGGACTGGTACGTCGACGCCGGCAACACCAGCCTCTACTACGCGGCGAACAAGCTGCTACCGGCCAAGACCCGGGTCTTCGTCGACTTCGTCGTCGACTACTTCCGCCGCCAGGACCTGGCCCGGCGCTTCTCCGCCTTCCCAACCGGCTAG METLSNIQCFVRSAEAGSFAEAARRLGLTPAGVGKNVARLESNLGVRLFQRSTRRLTLTEAGERFLQEVGGSLEGIQTALANVSSVGNQPSGTLKVSMGLAFGRDYILPLLGEFLERYPDIVPDWHFDNRQVDLIGEGFDAAIGGGFELPPGVVARNLTPGHLILLASPTYLRDKPPIRHPGDLGGFDGIRIRSPQTGRVRSWPLRRRNGEEAPIELRERMTMSDPEATCEVAAMGLGITLVCMQHAYAYLESGALVRVLPDWYVDAGNTSLYYAANKLLPAKTRVFVDFVVDYFRRQDLARRFSAFPTG Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0182 CDS 207071 207823 + probable short-chain dehydrogenase Class 3 NP_248872.1 15595380 yjgI 64% similar to putative oxidoreductase YjgI [Escherichia coli] PS00061: Short-chain dehydrogenases/reductases family signature Putative enzymes Cytoplasmic[Class 2] ; Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] TIGR03206|benzo_BadH|2-hydroxycyclohexanecarboxyl-CoA dehydrogenase|equivalog|1.1e-31|1.1.1.-|No Data|No Data PF08659|KR, KR domain|15|117|2e-09 COG1028|FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]. ; COG1028|FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]. ; COG1028|FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]. ATGTCCGTATCCTCTGCATCCCTCGCCGGCAAAGTCGCCTTCGTCCAGGGCGGTTCCCGCGGCATCGGCGCCGCCATCGTTCGCCGGCTGGCCGCCGAAGGCGCCAGCGTCGCCTTCACCTACGTCAGCTCGGCGGACAAGTCCCGGGCCCTGGCGGCCGAACTCGAAGGCGCCGGAGCCAGCATCCTGGCCCTGCATGCCGATAGCGCCGACGCGGCCGCGCTCGTCGCCGCCGTCGACGAAGCGGCGGCTCGCTTCGGACGCATCGACATCCTGGTCAACAATGCCGCCGTCCTCGCCCTCGGTTCGGTGGAAGAGCTGCCGCTGGCCGACTTCGAGCGGACCCTGGCGATCAACGTGCGCAGCGTCTTCGTCGCCACCCAGGCGGCGGTCAAGCACATGGGCGACGGCGGGCGGGTGATCAGCATCGGCAGCACCAATGCCGAACGCATGCCGTTCGCCGGCGGCGCCACCTACGCGATGAGCAAGTCGGCGCTGGTCGGCCTGACCAAGGGCCTGGCCCGCGACCTCGGCCCGCGCGGGATCACGGTGAACAACGTGCAGCCGGGTCCGGTGGATACCGACATGAACCCGGACGACGGCGACTTCGCCGAGGCCCTCAAGGGCCTGATGGCGCTGCCGCGCTACGCCCGCAGCGAGGAAATCGCCAGCTTCGTCGCCTACCTGGCCGGGCCGGAAGCGGCCTACATCACCGGGGCCAGCCTGACCATCGATGGCGGTTTCTCGGCCTGA MSVSSASLAGKVAFVQGGSRGIGAAIVRRLAAEGASVAFTYVSSADKSRALAAELEGAGASILALHADSADAAALVAAVDEAAARFGRIDILVNNAAVLALGSVEELPLADFERTLAINVRSVFVATQAAVKHMGDGGRVISIGSTNAERMPFAGGATYAMSKSALVGLTKGLARDLGPRGITVNNVQPGPVDTDMNPDDGDFAEALKGLMALPRYARSEEIASFVAYLAGPEAAYITGASLTIDGGFSA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0183 CDS 207923 209533 - atsA arylsulfatase Class 1 NP_248873.1 15595381 PMID:95262702 ; PMID:7744061 Adjacent to sulfate ester transporter 95% similar to arylsulfatase [Pseudomonas aeruginosa] PS00523: Sulfatases signature 1 Aromatic compound catabolism [PseudoCAP] 3.1.6.1 Central intermediary metabolism ; Carbon compound catabolism Cytoplasmic[Class 1] ; Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0008152|metabolic process|IDA ; biological_process|GO:0015978|carbon utilization by utilization of organic compounds|IDA ; biological_process|GO:0044248|cellular catabolic process|IDA TIGR03417|chol_sulfatase|choline-sulfatase|equivalog|1.4e-07|3.1.6.6|No Data|No Data PF00884|Sulfatase, Sulfatase|3|449|3e-55 COG3119|AslA, Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism]. ; COG3119|AslA, Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism]. ATGAGCAAACGCCCCAACTTCCTGGTGATCGTCGCCGACGACCTGGGCTTCTCCGATATCGGCGCCTTCGGCGGCGAGATCGCCACGCCGAACCTCGACGCCCTGGCCATCGCCGGCCTGCGCCTGACCGACTTCCACACCGCCTCGACCTGCTCGCCGACCCGCTCGATGCTGCTCACCGGCACCGACCACCACATCGCCGGGATCGGCACCATGGCCGAGGCGCTGACCCCGGAACTGGAAGGCAAGCCGGGTTACGAAGGGCATCTCAACGAGCGCGTGGTGGCGCTGCCGGAGCTGCTCCGCGAGGCCGGCTACCAGACCCTCATGGCCGGCAAGTGGCACCTCGGTCTGAAGCCGGAACAGACGCCCCATGCACGCGGTTTCGAGCGTTCCTTCTCGCTGCTGCCGGGCGCCGCCAACCACTATGGTTTCGAGCCGCCCTACGACGAAAGCACTCCGCGCATCCTCAAGGGTACGCCAGCGCTCTACGTGGAAGACGAGCGCTACCTCGACACGCTGCCGGAGGGCTTCTATTCCTCCGACGCCTTCGGCGACAAGCTGCTGCAATACCTCAAGGAGCGCGACCAGAGCCGGCCGTTCTTCGCCTACCTGCCGTTCTCCGCGCCGCACTGGCCGCTGCAAGCGCCGCGGGAGATCGTCGAGAAGTACCGCGGTCGCTACGACGCCGGTCCAGAAGCGCTGCGCCAGGAACGCCTGGCCCGGCTCAAGGAGCTGGGCCTGGTGGAAGCGGACGTCGAAGCCCATCCGGTGCTCGCCCTGACCCGCGAGTGGGAGGCCCTGGAGGACGAGGAACGGGCTAAGTCGGCGCGGGCGATGGAGGTCTACGCGGCGATGGTCGAGCGCATGGACTGGAACATCGGCAGGGTCGTGGACTACCTGCGCCGGCAGGGCGAGCTGGACAACACCTTCGTCCTGTTCATGTCCGACAACGGCGCCGAAGGCGCCCTGCTGGAGGCGTTCCCGAAATTCGGCCCGGACCTGCTGGGCTTTCTCGACCGGCACTACGACAACAGCCTGGAAAACATCGGCCGCGCCAATTCCTACGTCTGGTATGGCCCGCGCTGGGCCCAGGCGGCCACCGCACCATCGCGCCTGTACAAGGCGTTCACCACCCAGGGCGGGATTCGCGTGCCAGCGCTGGTGCGCTACCCGCGGCTAAGCCGGCAGGGTGCGATCAGCCATGCCTTCGCCACGGTGATGGACGTCACCCCGACCCTCCTCGACCTCGCCGGTGTCCGCCACCCAGGCAAGCGCTGGCGCGGCCGCGAGATCGCCGAGCCGCGCGGCAGGTCGTGGCTGGGTTGGCTTTCCGGCGAGACCGAGGCGGCCCACGACGAGAACACCGTGACCGGCTGGGAGCTGTTCGGCATGCGTGCGATCCGCCAGGGCGACTGGAAGGCGGTGTACCTGCCGGCCCCGGTGGGCCCGGCCACCTGGCAGCTCTACGACCTGGCCCGCGACCCGGGCGAGATCCACGACCTCGCTGACAGCCAGCCGGGCAAGCTGGCGGAGCTGATCGAGCATTGGAAGCGATACGTCAGCGAGACCGGTGTCGTAGAGGGGGCTTCGCCTTTCCTGGTGCGATAA MSKRPNFLVIVADDLGFSDIGAFGGEIATPNLDALAIAGLRLTDFHTASTCSPTRSMLLTGTDHHIAGIGTMAEALTPELEGKPGYEGHLNERVVALPELLREAGYQTLMAGKWHLGLKPEQTPHARGFERSFSLLPGAANHYGFEPPYDESTPRILKGTPALYVEDERYLDTLPEGFYSSDAFGDKLLQYLKERDQSRPFFAYLPFSAPHWPLQAPREIVEKYRGRYDAGPEALRQERLARLKELGLVEADVEAHPVLALTREWEALEDEERAKSARAMEVYAAMVERMDWNIGRVVDYLRRQGELDNTFVLFMSDNGAEGALLEAFPKFGPDLLGFLDRHYDNSLENIGRANSYVWYGPRWAQAATAPSRLYKAFTTQGGIRVPALVRYPRLSRQGAISHAFATVMDVTPTLLDLAGVRHPGKRWRGREIAEPRGRSWLGWLSGETEAAHDENTVTGWELFGMRAIRQGDWKAVYLPAPVGPATWQLYDLARDPGEIHDLADSQPGKLAELIEHWKRYVSETGVVEGASPFLVR Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0184 CDS 209621 210460 - probable ATP-binding component of ABC transporter Class 3 NP_248874.1 15595382 atsC 95% similar to putative transporter, ATP-binding component AtsC [Pseudomonas aeruginosa] PS00211: ABC transporters family signature Transport of small molecules Cytoplasmic[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0015706|nitrate transport|IEA ; cellular_component|GO:0009898|internal side of plasma membrane|IEA ; cellular_component|GO:0055052|ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing|IEA ; molecular_function|GO:0005524|ATP binding|IEA ; molecular_function|GO:0015414|nitrate transmembrane-transporting ATPase activity|IEA TIGR01184|ntrCD|nitrate ABC transporter, ATP-binding proteins C and D|subfamily|3.4e-75||Transport and binding proteins | Transport and binding proteins|Anions | Other PF00005|ABC_tran, ABC transporter|43|219|7e-46 COG1116|TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]. ; COG1116|TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]. ; COG1116|TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]. ATGAACGCATTCACCGCGCCCGCCACGGGCACCCCGCTGGTCAGCTTCCGCCAGGTGCGCAAGCACTTCGCCGTGGACGGCCGGCGACTGGAAGCGATCCAGCAGTTCGACCTGGAGATCGGCGAGGGCGAGTTCATCGCCATCGTCGGCGCCAGTGGCTGCGGCAAGTCGACCCTGCTGCGCCTGCTGATCGGCCTGGACCGCGACTACGACGGCGAGATCCGCGTCGACGGCCGGCCAATCGCCGGCATCGGCGGCGAACGCGGCATCGTGTTCCAGGAGCACCGCCTGTTCCCCTGGCTGACGGTGCAGCAGAACGTCGCCCTCGGCCTGGTCAACGAAGCCCTTGGCGAAACCGACAAGGCGGCGCGGATCGACGAATACATCCGCCTGGTCGGCCTGCACGGCTTCGAGCGTGCCTACCCGCACCAGTTGTCCGGCGGCATGGCCCAGCGCGTGGCGATCGCCCGTGGCCTGGTGGCCAGCCCGCGCCTGCTGCTGCTCGACGAGCCGTTCAGCGCCCTCGACGCACTGACCCGCCAGCAGTTGCAGGAAGAGTTGCTGGCGATCCGCCGGCGCACCCGTATCACCACCCTGCTGGTCACCCACGACGTCGAGGAGGCGCTCTACCTGGCCGACCGGGTGGTGGTGATGGAGCCGCGTCCGGGGCGGATCAGGCGGGTGGTCGAGGTGGGCCTGGCGCATCCGCGCGAGCGCGGTGGCTTCGACTTCCTGCGCCAGCGCGAAGCGCTGCTGCACGAACTGACCGCCGACGGCGAGTACGTCGCGCCGCCGCCGCGACGGGTGGAAAACCTGCCCTTCGAATTCATCGCTTGCTGA MNAFTAPATGTPLVSFRQVRKHFAVDGRRLEAIQQFDLEIGEGEFIAIVGASGCGKSTLLRLLIGLDRDYDGEIRVDGRPIAGIGGERGIVFQEHRLFPWLTVQQNVALGLVNEALGETDKAARIDEYIRLVGLHGFERAYPHQLSGGMAQRVAIARGLVASPRLLLLDEPFSALDALTRQQLQEELLAIRRRTRITTLLVTHDVEEALYLADRVVVMEPRPGRIRRVVEVGLAHPRERGGFDFLRQREALLHELTADGEYVAPPPRRVENLPFEFIAC Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0185 CDS 210457 212073 - probable permease of ABC transporter Class 3 NP_248875.1 15595383 atsB PMID:95262702 ; PMID:15687295 ; PMID:7744061 89% similar to putative ABC-type transporter, membrane subunit AtsB [Pseudomonas aeruginosa] 10 predicted transmembrane helices ; PF00528: Binding-protein-dependent transport systems inner membrane component ; 10 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Membrane proteins ; Transport of small molecules Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0015706|nitrate transport|IEA ; cellular_component|GO:0005887|integral to plasma membrane|IEA ; cellular_component|GO:0055052|ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing|IEA ; molecular_function|GO:0015414|nitrate transmembrane-transporting ATPase activity|IEA TIGR01183|ntrB|nitrate ABC transporter, permease protein|equivalog|8.4e-43||Transport and binding proteins|Anions PF00528|BPD_transp_1, Binding-protein-dependent transport system inner membrane component|340|528|5e-12 COG0600|TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]. ; COG0600|TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]. ; COG0600|TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]. ATGAAGAATATCGATAAAACCCTTTCGCCCGCCTGGAGCCGGCCCCTGCCGCGCCTGGCGCCGCCGCCCTCCGCGGCTTTCGCCCGGCGCCTGGGGGACGGCCTGCTGCCCTGGTTGCTGCCGCTCGGGCTGGCGCTGCTGTGGTGGGTCGCCAGCCATCGCCACTGGATGTCGGCCCAGGTGCTGCCAACTCCCGAGCTGGTCTGGCAGAGCGCCCGCGAGTTGCTCGCCGGCGAACTCTGGAGCGAATTGGCGATCAGCCTGCGGCGCCTGGCCTGGGGCCTGCTCGCCGGGGTCGCCAGCGGCGCCGCGCTAGGCGCCTGGCTGGGCTTCAGTCCGCGTGCCGAGCGCCTGGTCTTCCCCACCTTCAGCGCCCTCGCGCAAATCCCCACGCTGGCCTGGATCCCGCTGTTCATGCTGTTCTTCGGCATCGGCGAACTGCTCAAGCTGGTGGTGCTGGTGAAAGCGGTCGTGGTGCCGGTGACCATCCATACCCTGGTCGGCGTGCGCGACGCCCAGCCCAAGCTGCGCGAAGCCGCCGCAGTACTGCGCCTGCCGCCACGCCTGCTGGTCTGGCGGCTGATCCTGCCGGCGGCGCTGCCGGCCTTCCTCACCGGGCTGCGCCTGGCCCTGGCGCAGGGCTGGACCTCGCTGCTGGCGGTCGAGTTGCTGGCTTCCAGCGAGGGTATCGGCTACCTGATGGTGCAGGGCCGGCAACTGTTCATGCTCGACATCGTGTTCGTCTGCATCCTCATCATCGGCCTGGTCGGGGTGGGCATGGACCGCGCCATCCAGTGGCTCGACCGCCGCCTGCTGCACTGGCCGCAAGCCGCCACCGGCGAATTCCGCCGGCGCCCGCCGGGACGCGGCTGGCAGCGCCTGCAGGTGTGGCTGCCGCCGCTGGCGCTGCTGCTCCTGTGGCAGTCGGCGAGCAGCGCCGAATGGGTCGATCCGGCGATCCTCGCCAGCCCTCTGGAAGTGGCGCGGGCGACCTGGAGCGGAGCGCTCGACGGCAGCCTCCCAGGCGCCCTGTTCGACAGCCTGAAGCGCACGCTCGGCGGGCTCCTGCTGGGCGGCGGCCTGGGTTTCCTCGGCGGCCTGCTGCTCGGCCTGTGGCGCCCGGCGGAACGCTTCTTCGGCCCCACTTTCGCGGCACTGCGGCAGGTGGCGATCTTCGCCTGGGTACCGCTGCTCACCGCCTGGTTCGGCCTGGGCGAACCGGCCAAGCTGACGTTCGTCGCAATCGCCGCCTTCTTCCCGCTGCTGCTGGCCACCCAGCGCGGCATCGCCAGCCTGCCGCCGAGCCTCGGCGAGGCGGCCCGGGTGCTGCGCCTGGGTCCCTGGCGACGGCTGCTCCGGCTGGTCCTGCCGGGTGCCGCCCCGTCGGTGTTCGCCGGCCTGCGCCTGGCGCTGATCTACGCCTGGCTGGGAACCATCGGCGCCGAGTACTTCATGCCCTCCGACGGCGGCATCGGCAGCCTGATGATCGGCGCCCAGCAATTGTTCCGCATGGACCTGATCGGCGCCGGCATGCTCCTGGTCGGCCTCACCGGCGCCCTGCTCAATGCCCTCGGCCAACGCATCGAAGCGCGCGCCACGCGCTGGAGACACGCATGA MKNIDKTLSPAWSRPLPRLAPPPSAAFARRLGDGLLPWLLPLGLALLWWVASHRHWMSAQVLPTPELVWQSARELLAGELWSELAISLRRLAWGLLAGVASGAALGAWLGFSPRAERLVFPTFSALAQIPTLAWIPLFMLFFGIGELLKLVVLVKAVVVPVTIHTLVGVRDAQPKLREAAAVLRLPPRLLVWRLILPAALPAFLTGLRLALAQGWTSLLAVELLASSEGIGYLMVQGRQLFMLDIVFVCILIIGLVGVGMDRAIQWLDRRLLHWPQAATGEFRRRPPGRGWQRLQVWLPPLALLLLWQSASSAEWVDPAILASPLEVARATWSGALDGSLPGALFDSLKRTLGGLLLGGGLGFLGGLLLGLWRPAERFFGPTFAALRQVAIFAWVPLLTAWFGLGEPAKLTFVAIAAFFPLLLATQRGIASLPPSLGEAARVLRLGPWRRLLRLVLPGAAPSVFAGLRLALIYAWLGTIGAEYFMPSDGGIGSLMIGAQQLFRMDLIGAGMLLVGLTGALLNALGQRIEARATRWRHA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0186 CDS 212340 213401 + probable binding protein component of ABC transporter Class 3 NP_248876.1 15595384 atsR PMID:15687295 100% similar to putative sulfate ester binding protein atsR [Pseudomonas aeruginosa] PD02951: BIOSYNTHESIS PROTEIN THIAMIN PRECURSOR PYRIMIDINE ENZYME THIAMINE PERIPLASMIC SIGNAL LIPOPROTEIN ; type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 30) ; type I export signal computationally predicted by Phobius (cleavage after residue 30) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 30) ; Export across inner membrane confirmed by PhoA fusion screen Transport of small molecules Unknown[Class 3] ; Unknown[Class 3] biological_process|GO:0042918|alkanesulfonate transport|IEA ; cellular_component|GO:0009897|external side of plasma membrane|IEA ; cellular_component|GO:0030288|outer membrane-bounded periplasmic space|IEA ; cellular_component|GO:0043190|ATP-binding cassette (ABC) transporter complex|IEA ; molecular_function|GO:0005488|binding|IEA ; molecular_function|GO:0042626|ATPase activity, coupled to transmembrane movement of substances|IEA TIGR01728|SsuA_fam|ABC transporter, substrate-binding protein, aliphatic sulfonates family|subfamily|7.1e-33||Transport and binding proteins|Other PF09084|NMT1, NMT1/THI5 like|68|258|8e-17 COG0715|TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism]. ; COG0715|TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism]. ; COG0715|TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism]. ATGAAAGCGCTTACGTCTTCCCTGCTCGGTCTGTTCGCCGCGCCTGTGCTCGCCGGCCTGCTCGGTGCCTACGTGCCGCTGGCGAGCGCCGCTCCGCCGAAGGAAATCCGCATCGCGGTGCCGGACGTCAGCGCCGGCAGTTCGCACTCGGGCGGCGGCGTGGTCGACGTGCTCTACACCCGCCAGTTGCTGGAGAAGGAGTTCGCCAACGACGGCATCGCGGTGAAATGGAGCTTCTTCAAGGGCGCCGGCCCGGTGGTCAACGAAGCGTTCGCCAACGGCCAGGTGGACTTCGCCTACCTCGGCGACCTGGCGGCGATCATCGGCAAGTCCGGAGGCCTGGACAGCCGCCTGCTGGCCGCTACCGCGCGAGGGGTCAACCACTATCTCGGCGTGCAGCCGGGCTCCGGGATCAAGACCCTGGAGGATCTCAAGGGCAAGCGCGTAGGCATCTTCCGTGGCACCGCCAGCCAGTTGTCGTTCGACAATGCCCTGGCCAGCGTCGGTCTCAGCGAGAAGGACCTGAAGGTGATCAACCTCGATTTCAGCGCCGCCCTGTCCGCCCTCGCAGCCAGGCAGATCGATGCCACCTGGGGCCTGGCCGGACTGTTCGCCCTGCGCGACCGCGGGCTCGCGGAAATTCCGCTGAGCACCCGCGACCTGAACGGCGCCGGCACCCTGCAGGCGCTGCTGGTCGGCTCCGGAGCCTTCGTCGATGCCCATCCGGACATCACCGAGCGGCTGCTCAAGGTGCAGTTGCAGGCCCAGGACTGGCTGGCCCGCGAGGAGAACCGCGACGCCTACATCGAACTGGTGTCGAAGCAGGCCAGCTACCCGGTGGTGATCCTGCAGAGCGAGTACCGTGGCCGCAAGCTGGGCGACGCCCTGTCGCCGCGCCTGGACGCCGATTTCCTTGGCCGGCTGGATGCTTCGATCCAGGCGGCCAAGCGTTTCGGCCTGATCCGTCGCGAATTCAGCGCCGAGCAGTGGGCCGCGCCGGAACTGCTGGAGGCGGCCGGCAAGCTGGCGAAGGCCAAGGCCGTGGCGCAGGCGGCGGAGTGA MKALTSSLLGLFAAPVLAGLLGAYVPLASAAPPKEIRIAVPDVSAGSSHSGGGVVDVLYTRQLLEKEFANDGIAVKWSFFKGAGPVVNEAFANGQVDFAYLGDLAAIIGKSGGLDSRLLAATARGVNHYLGVQPGSGIKTLEDLKGKRVGIFRGTASQLSFDNALASVGLSEKDLKVINLDFSAALSALAARQIDATWGLAGLFALRDRGLAEIPLSTRDLNGAGTLQALLVGSGAFVDAHPDITERLLKVQLQAQDWLAREENRDAYIELVSKQASYPVVILQSEYRGRKLGDALSPRLDADFLGRLDASIQAAKRFGLIRREFSAEQWAAPELLEAAGKLAKAKAVAQAAE Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0187 CDS 213819 214634 + hypothetical protein Class 4 NP_248877.1 15595385 Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] PF02668|TauD, Taurine catabolism dioxygenase TauD, TfdA family|19|255|4e-18 COG2175|TauD, Probable taurine catabolism dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism]. ; COG2175|TauD, Probable taurine catabolism dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism]. ; COG2175|TauD, Probable taurine catabolism dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism]. ATGAATCTCGATAGCAAATTGTTCGACGCGACACTCGATCTCGAACGCGTGAAAGTTTCGGTGAGAACGCTGGTGAAGTTATCCCGCCAGGAACAATCGGCGATCATCCGGACCCTCAACGAGTTTGGTTTCCTGCTGTTGCGCAGCGAACACGGCGAAGACAGGCAGGAACTTCTCGCGCTCAAGGAGTTGTTCGGCCGCGCCGCCCCCCACCCGCGCGCCGACGCCGACGGCATCGTGCCGATCAGCAATGCGCGGTATGTCAGCGGCTACCTCGGCTCCACGCCGCTGGAGCACAAGCTGCACACCGACGGCGCTTTCCTCGACACCCCGGAGCAATTGTGCAGCCTGCAATGCGTGCGCAACGCCCGGGAGGGCGGGGAGACCCTGCTGGCCAGCGCCGGACTGGCCTTCGAGCGCCTGCGCCGGCGCATGCCGACCAAGCATCTCGGCCTGCTGCGCGGCGACGCCCTGACCATCGTGCGCAAGCACCAGAGCAGCACCCAGCCGGTGTTCCGCCTGAACGGCGAGGCGCTGGGCATCAAGTTCCGGCAGAACGACGGGGCGGCCGAGGTGGTCGAGCACCCTGTGGCGGTGGAGGCCTTCGCCGAACTGGTGGCGGCGCTCGAGGATCCGGCCTGCCAACTGCGGATCAAGCTCGAACCGGGGGAAATCCTGGTGCTCGACAACACCGCGGTGTTGCACGGGCGCACCGCCTTCTGCGCCAACGAACTGCGCGAAATGCGCCGGCTCAACTTCGACGGCCACGGCCGCCTGCGGGCGGAGCTGGAACTGGGCTTCAAGGTGGGGTTGTGA MNLDSKLFDATLDLERVKVSVRTLVKLSRQEQSAIIRTLNEFGFLLLRSEHGEDRQELLALKELFGRAAPHPRADADGIVPISNARYVSGYLGSTPLEHKLHTDGAFLDTPEQLCSLQCVRNAREGGETLLASAGLAFERLRRRMPTKHLGLLRGDALTIVRKHQSSTQPVFRLNGEALGIKFRQNDGAAEVVEHPVAVEAFAELVAALEDPACQLRIKLEPGEILVLDNTAVLHGRTAFCANELREMRRLNFDGHGRLRAELELGFKVGL Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0188 CDS 214631 215512 + hypothetical protein Class 4 NP_248878.1 15595386 PMID:15687295 44% similar to hypothetical protein MTH1382 [Methanobacterium thermoautotrophicum] 8 predicted transmembrane helices ; 8 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Membrane proteins Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] TIGR00946|2a69|Auxin Efflux Carrier|subfamily|4.7e-07||Transport and binding proteins|Other PF03547|Mem_trans, Membrane transport protein|9|287|1e-15 COG0679|COG0679, Predicted permeases [General function prediction only]. ; COG0679|COG0679, Predicted permeases [General function prediction only]. ; COG0679|COG0679, Predicted permeases [General function prediction only]. GTGATCGCACAGTTCGTCGCGGTGGTGCTGCCGATCCTGATCTGCACCGGGATCGGTTTCGCCTGGAGCCGTTCCGCCGGGCCGGTGGATACCCGCGCGCTGGTGTTCCTGGTGGCCAACGTCGGCTTTCCCTGCCTGCTGCTGTCGTCGCTGGACCGCCCCGGCCTGTCCATTGGCATGGTGGCCGGGGTGTTCCTCGCCACCGCGCTGGCGGTGCTGGCGTTCGCCCTGCTGGGCCTGGTCGCCCTGCGCCTGCTGCGGATGCCGGTGCGGCGCTACCTGCCGTCGATCATGCTGCCGAACTCCGGGAACATGGGCATCCCCATCGCCTACCTGGCCTTCGGCGAGGAGGCGCTGGTGTATGCGGTGGCGTTCTCCACCCTGATCCAGGTGGGTCACGCGACGCTCGGCGTCTGGTTCGCTTCGGGCGATATCACCCCGGCGAGCATCCTGCGCAACCCGATGATCTATGCCCTGGCCGTGGCGCTGGGCCTGATCGCCCTGGGCTGGAGCCTGCCGCCGCCGTTGCGCGATGTGACCCGCCTGCTGGGTGGGATTACCGTGCCGCTGATGCTGGTGATGCTCGGCCTGTCGCTGGCCGGTCTGCGCCTGCACGAGACCTGGCGGCCGTTGCTGCTGTCTCTGGTGCGGGTCTGGGGCGGTTTCGCGGTCGGCTATGGGATCGCTGCCGGCCTGGGCATGGCGGCGGTGGCGGCGGGCACCTTCGCCATCCAGTGCGGGATGCCGACCGCGGTGCTCACCTACCTGTTGGCCAAGCGTTACGACGGACCGGTGAACGAAGTGGCAGGCATGGTGCTGATCACCACGCTGCTGGTGCTGCTCTCCACGCCTTTGTTCATCCAGTTGCTGCCGCGCGCGTGA MIAQFVAVVLPILICTGIGFAWSRSAGPVDTRALVFLVANVGFPCLLLSSLDRPGLSIGMVAGVFLATALAVLAFALLGLVALRLLRMPVRRYLPSIMLPNSGNMGIPIAYLAFGEEALVYAVAFSTLIQVGHATLGVWFASGDITPASILRNPMIYALAVALGLIALGWSLPPPLRDVTRLLGGITVPLMLVMLGLSLAGLRLHETWRPLLLSLVRVWGGFAVGYGIAAGLGMAAVAAGTFAIQCGMPTAVLTYLLAKRYDGPVNEVAGMVLITTLLVLLSTPLFIQLLPRA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0189 CDS 215550 216908 - probable porin Class 3 NP_248879.1 15595387 opdI PMID:15687295 55% similar to porin OprD precursor [Pseudomonas aeruginosa] PSORT predicted signal peptide ; type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 23) ; type I export signal computationally predicted by Phobius (cleavage after residue 25) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 25) Membrane proteins ; Transport of small molecules Outer Membrane[Class 2] ; Outer Membrane[Class 3] ; Outer Membrane[Class 3] PF03573|OprD, outer membrane porin, OprD family|5|451|1e-133 ATGCAAAATCTCAGACGCGCTGTATTCGCCGGCCTGGTCGCCGGCACGCTTTCCGAAGGGGCGGCCGCGACGGCCGGGGATGGGGGCTTCGTCGAGGACAGCGAACTGCAGTTCCTCGCTCGCACCTACTACTTCAACCGCGACTACCGCGACAGCCCGAACAACGCCGGGCGCAACCGCTTCAAGCCCAGGAGCGAGCGCAACGGCTACCGCGAGGAAGCCACCCAGGGCCTGCGCCTCCAGTTCGCCTCCGGCTACACGCCGGGCAGCCTCGGCTTCGGCCTCGACGCCCATGCCATGCTCGGCCTGCAACTGGACAGCGGCGGCGGCCGCACCGGCACCGGCAACCTGCCGGTCGGCGCCGACGGCCATCCCGACCATCGCTACGGCAAGGTCGGTGGCGCCCTCAGGCTACGCCACGGCGAAACCCGCCTGAAGTACGGCCAGACCACCACCAGCGCGCCGGTGTTCGCCGCCAGCAGCAACCGCACGCTGGCCGGCATGGCCTACGGCCTGCTGCTGGAGGACCGCTCGTTCGACGGGCTGCTGCTCGAGGGCGGGCGCTTCACCGCCGCCTCCGGCCCCGGCGAATCCAAGGTCCGCGGCGACATCAGCACCGTCTACGGACGCCTCGGCGCCTATCCGGTGCGCCTCGACGCGGTCGGCTTCCTCGGCGGTCAATGGCAGGCCACGGAGCGGCTGCAACTGTCGCTCTACGCCTCGCGCTTCGACGACATCTGGCAGCAGGCCTATTTCGGCGCCAGCCATCGCCAGCCGCTGGGCGGGGAGCGCGCGCTGCGGGTCGACCTCGACGCTTACCGCACCCGCGACAGCGGCCAGAGCCGCTTCGGCCGCATCGACACCCTGACCAGCTCCCTGGCCCTGGGCTACGAACATGGGCCGCAGCGCATCACCCTGGCCTACCAGCGTGTCCATGGCGAGCAGCCGTTCGACTACATGGCCTTCGGCGACGGGCGCTCCAGCGCGTCCATGGTACTGGCCAACTCGGTGGGCTACTCCGACTTCAACGGACCGGGCGAGCGTTCCTGGCAATTACGCTATGACCTGGACCTCGGCGCGCTCGGCCTGCCTGGGCTCAGCCTGCATGCGCTGCATGCCCGCGGCCGTGCCGGGGCCAGCGCCAGCAGTGCCGCCGAGAGCATCTACGCCGGACTCTACGGGCGTGACGGGCGGCACCGGGAAAACGACCTCGGCTTCGCCTATCGGGTCAAGGCGGGCCCCCTCGCCGGCCTCGCGCTGCGCGCCTCGCAGGCCTGGCACCGGGGCAACGCGAGCTATCTCGACGGCGACATCGACGAAACCCGGCTGGTCGTCGATTACTCCCGCTCGATCTGGTGA MQNLRRAVFAGLVAGTLSEGAAATAGDGGFVEDSELQFLARTYYFNRDYRDSPNNAGRNRFKPRSERNGYREEATQGLRLQFASGYTPGSLGFGLDAHAMLGLQLDSGGGRTGTGNLPVGADGHPDHRYGKVGGALRLRHGETRLKYGQTTTSAPVFAASSNRTLAGMAYGLLLEDRSFDGLLLEGGRFTAASGPGESKVRGDISTVYGRLGAYPVRLDAVGFLGGQWQATERLQLSLYASRFDDIWQQAYFGASHRQPLGGERALRVDLDAYRTRDSGQSRFGRIDTLTSSLALGYEHGPQRITLAYQRVHGEQPFDYMAFGDGRSSASMVLANSVGYSDFNGPGERSWQLRYDLDLGALGLPGLSLHALHARGRAGASASSAAESIYAGLYGRDGRHRENDLGFAYRVKAGPLAGLALRASQAWHRGNASYLDGDIDETRLVVDYSRSIW Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0190 CDS 217156 217881 + probable acid phosphatase Class 3 NP_248880.1 15595388 PMID:15687295 42% similar to acid phosphatase PhoC [Morganella morganii] PS01157: Class A bacterial acid phosphatases signature ; type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 24) ; type I export signal computationally predicted by Phobius (cleavage after residue 28) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 24) Putative enzymes Periplasmic[Class 3] ; Periplasmic[Class 3] PF01569|PAP2, PAP2 superfamily|124|203|3e-07 COG0671|PgpB, Membrane-associated phospholipid phosphatase [Lipid metabolism]. ; COG0671|PgpB, Membrane-associated phospholipid phosphatase [Lipid metabolism]. ; COG0671|PgpB, Membrane-associated phospholipid phosphatase [Lipid metabolism]. ATGAACAACAAGACCCTATGCCCTTCGCTCTTGCTCTGCCTTTCGCTGCTTGCACCGCTGTCTTGTCTCGGGGAGACCGCCGCCGCGCCCTATCCGCTGGCCCACCCACCGCGCCTGGCCGACTACCTCCCGCCGCCGCCGGCGGCGGACTCGGCTGCGGCCGTCGCCGATCTCGGCGCGGTGCTGGAGGCGCAACGCCTGCGCACGCCCGAACAGGTACGCCGGGTACGCGCCCACGACCAGTGGGAGGACAACGTCTTCCCCTTCGCCGGCGACCTGCTGGGCGCCTCGTTCGACAAGGAACGCCTGCCGCTGACCCGGAGTTTCTTCAACCGCGCCCAGGAAAACCTGGTCGAGGTGCTGATGCCGGCGAAGAAGCACTTCGCCCGCCCGCGTCCCTACGAAGTGACACCGAAGGTGAAGCCGGTGCTGCCGCCGCCGGAGGGGGAGTCCTATCCCAGCGGCCACACCATGGACAGCTACTTCAAGGCCTCGCTGCTGAGCATGCTGGTGCCGGAGCATCACGATGCGTTCTTCGCCCGCGCCGAGGAGCATGCGCAGAGCCGTGTGCTGGCCGGCGTGCACTTCCCCAGCGACCTGGAAGGCGGGCAGACCGCCGCCGCGGCGCTGGTGGCGAGCCTGCTGGCCGATCCGGCGGTGGCCGCCGACTTCGCCGCGGTGCGCGAGGAGCTGCGCGGCGCGCTGGGGTTGCCGAAACTCCAGTAG MNNKTLCPSLLLCLSLLAPLSCLGETAAAPYPLAHPPRLADYLPPPPAADSAAAVADLGAVLEAQRLRTPEQVRRVRAHDQWEDNVFPFAGDLLGASFDKERLPLTRSFFNRAQENLVEVLMPAKKHFARPRPYEVTPKVKPVLPPPEGESYPSGHTMDSYFKASLLSMLVPEHHDAFFARAEEHAQSRVLAGVHFPSDLEGGQTAAAALVASLLADPAVAADFAAVREELRGALGLPKLQ Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0191 CDS 217905 218822 - probable transcriptional regulator Class 3 NP_248881.1 15595389 59% similar to transcriptional control factor SdsB [Pseudomonas sp.] PS00044: Bacterial regulatory proteins, lysR family signature Transcriptional regulators Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0019619|protocatechuate catabolic process|IEA ; biological_process|GO:0045893|positive regulation of transcription, DNA-dependent|IEA ; molecular_function|GO:0016563|transcription activator activity|IEA TIGR02424|TF_pcaQ|pca operon transcription factor PcaQ|equivalog|1.4e-12||Energy metabolism | Regulatory functions|Other | DNA interactions PF00126|HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family|3|61|6e-19 COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription]. ATGGATCTGCGCCAACTGCGTTACTTCATCGCCCTCGCCGAACACCGCAGTTTCGTCCGCGCGGCGGACGCCATGGGCATCACCCAGCCGGCCTTCAGCCGCAGCATCCAGGGCCTGGAGCAGGAGCTTGGCTGTCAGTTGGTGGACCGTGGCAGCAAGGACCTGCGCCCGACGCCGGAAGGCCAGGTGGTGCTGCAACACGCGCTGAGCCTGGTGCAGGGGTCGGCCAACCTGATCCACGAGATCGCCCAGTTGAACAAGCTGGATGCCGGCGAGCTGCGCTTCGGCAGCGGGCCGGCGCCGGCCCAGCAACTGGTGCCGGACGCGGTGGCCGACTTCATCAACCGCCACCCGCGGGTGCAGATCAGCCTGGACGTGGACAACTGGGAAAAGCTCAGCCGCGCCCTGCTCCGCGAAGAGATCGAATTCTTCGTCGCCGACATCCGCGACTTCGAGGCCGACCCGAACTTCCAGACGCGCCCGCTGACCCCGCGCCGCGGCCAGTTCTTCTGCCGTCCGCAACATCCGCTGCTGGGCAAGGACAGCCTGTCCACCAACGACCTGTTCAACTACCCGCTGGCCTCGACCCTGATTCCCCCGGGCATCCGCAAGCTGCTGGCGAACCTCAGCGGCAAGATCGACTTCGCCGCCAACATCCGCTGCGAGAACATGCACGCGCTGATCCGTATCGTCCGCCAGACCGACGCCATCGGCATCGCCAGCGACGAGACCCTGCGCCCCTACCTGCAGCGCGGCGAACTGCAACCGCTACAGTGGCGCAACCTGCCGCAGAACCTGGATAGCCTCAGCGCCCGCTGCGGCATCATCAGCCGCAGCGGCTACCGGCTTTCGGCAGCGGCCAAGGCGATGATCGAGACGCTGGTGGAACTGGACCAGGCGCAACACGCGGCGGCCTGA MDLRQLRYFIALAEHRSFVRAADAMGITQPAFSRSIQGLEQELGCQLVDRGSKDLRPTPEGQVVLQHALSLVQGSANLIHEIAQLNKLDAGELRFGSGPAPAQQLVPDAVADFINRHPRVQISLDVDNWEKLSRALLREEIEFFVADIRDFEADPNFQTRPLTPRRGQFFCRPQHPLLGKDSLSTNDLFNYPLASTLIPPGIRKLLANLSGKIDFAANIRCENMHALIRIVRQTDAIGIASDETLRPYLQRGELQPLQWRNLPQNLDSLSARCGIISRSGYRLSAAAKAMIETLVELDQAQHAAA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0192 CDS 219172 221544 + probable TonB-dependent receptor Class 3 NP_248882.1 15595390 PMID:95075311 ; PMID:15687295 ; PMID:7984105 39% similar to pesticin receptor precursor FyuA [Yersinia enterocolitica] PSORT predicted signal peptide ; PS00430: TonB-dependent receptor proteins signature 1 ; type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 35) ; type I export signal computationally predicted by Phobius (cleavage after residue 35) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 35) ; Export across inner membrane confirmed by PhoA fusion screen Membrane proteins ; Transport of small molecules Outer Membrane[Class 2] ; Outer Membrane[Class 3] ; Outer Membrane[Class 3] biological_process|GO:0015892|siderophore-iron transport|IEA ; cellular_component|GO:0019867|outer membrane|IEA ; molecular_function|GO:0015343|siderophore-iron transmembrane transporter activity|IEA TIGR01783|TonB-siderophor|TonB-dependent siderophore receptor|subfamily|3.6e-21||Transport and binding proteins | Transport and binding proteins|Cations and iron carrying compounds | Porins PF07715|Plug, TonB-dependent Receptor Plug Domain|75|181|1e-11 COG1629|CirA, Outer membrane receptor proteins, mostly Fe transport [Inorganic ion transport and metabolism]. ; COG1629|CirA, Outer membrane receptor proteins, mostly Fe transport [Inorganic ion transport and metabolism]. ; COG1629|CirA, Outer membrane receptor proteins, mostly Fe transport [Inorganic ion transport and metabolism]. ATGAAGCACCACTACCGCCTGCCGCTCCGCCGAACGCCGCCCGGCGGCTCCGACTACGCCCTGGCCCTGCTGCTCGCCCTCGGCGGTGCGTTGCCGGCCAGTGCCGCCGATGCTCCCGCGCCCGCCGAGGAAGCGCCGCCGCTGGCCGGCAGCGCACCGGCCAAGGCCGATACGGCCCTGGGCAAGGTCACTGTCACCGCGCGTCGCCGCGAGGAGGATTCGCAGAAGGTACCGACGCCGATCACCGTGCTCGGCGGCGAGACTCTCGAGGCCCAGCGCATCTCCCGGGTGCAGGACCTGCAGCAGGTGCTGCCCAGCGTCAATGTCGCCTACATCCATGCGCGGCAGTCGAGCGTCGCCGTGCGCGGCATCGGCAACAACCCCGCCAGCGACGGCCTGGAAGGCAGCGCCGGGATCTACCTCGACAACGTCTACCTGGGACGTCCGGGAATGGCCGTGTTCGACCTGCTGGACATCGAGCAACTGGAGCTGCTGCGCGGTCCGCAGGGCACCCTGTTCGGCAAGAACACCACCGCCGGGGTGCTGAACATCAGCACCCGCGCGCCGACCTTCACTGCCGAGCGTACCGTCGAGGTCTCCGGCGGGCAGGATGGCTACTTCCAGGGCCGCGGCACGGTTTCCGGGCCGCTCGGCGAAACCCTCGCCGGACGCCTCTCGGCCTATCGCACCCGCGACGACGGCTACATCAAGAACATCCACGACGACAACTATCTCAACGGCGGCGAGCGCCAGGGCGCGCGCGGGCAATTGCTGTTCGAGCCGAACGAGGACTTCAGCCTGCGCTGGATCGCCGACTACAACGAGGAGGATTCGAGCAACGGCAGCATGGTGGTCTACGGCGGCGCCGAGCGTTTCTGGCAGCGCGCCGCGCTGGTCGGCGCTTCGCCGTTGCGCGATCCGCAGCGCAGGAAGGTCAACATCAACGGCCGCCAGCACGTCAGCGTGCACCAGGGTGGCAGCTCGCTGGAGGCCAACTGGAACCTCGCCGGCGGTTACCGCCTGACCTCCATCAGCGCCTACCGCTACTGGCACTTCACCCCGGCCAACGACGAGCAACTGAACGTCTCGGCGATCAACGACACCGGGGTGGAAGTGCACGACCGGCAGTTCTCCCAGGAGATCCGCCTGGCCTCGCCCACCGGCGGTGCCTTCGACTACGTGGTGGGCGCCTACGCGTTCAGGCAGAACCTCGGCAACAAGACCTTCACCTCCTACGGACCGTTGGCCGACCTGTACCTGCTCGGCGCCAATCTCGGCGCGCTGAACGACACCTACTCGAAGGCCAACGGCAAGATCGAGACCGACAGCTTCGCGCTGTTCGCCCAGGGCACCTGGCACCTCACCGAACGCCTGGACTTCACCGCCGGCCTGCGTGGTACCTACGAGGAGAAGAACGCCAAGGTCGAGCGCTTCGCTCCGCTGGGCGGCGCGGCGGTCGGCGGGGTCGGCGCGGCGGTGCGCAACGGCCAGCTCGGCGCCTACGATTCCGGCGATCTCAGCCAGTACAACTTCGCCCCTTCGGCGTTGCTCAGCCTCAGCTACCAGTTCAGCGACGACCTGCTCGGCTACGCCAGCCTGTCCCACGGCGAGAAGTCCGGCGGGGTCAACCTGGCGGTGGGCAGCGCACCGAGCGCCGGCGCCGATTCGCTGCTGGTCGGACCGGAGCGCGCCAACGACGCCGAGCTGGGCCTGAAGAGCACGCTCTTCGACCGGCGCCTGCTGCTCAACGCCAACCTGTTCTGGACCGGCATCCACGGCTACCAGGCCACCACCCTGTACCAGGCGCCGGGCTCGACCCAGTTGGTGCAGGTGCTGGCCAACGCCGGCAGCGTGCGCTCGCGTGGTCTGGAGTTCGAGGCCACCGCGCTGCCGTTGCGCGGCCTGACCCTGAACTTCAACGGCTCCTATAACGACGTCACCTACCTGTCGTTCAAGGATGCCCCGTGCCCTGCGGAAGTCAGCACCCGGCCCGGCGCGCCGAGCAGTTGCGACCTCACCGGGCAGCGCGTGGTCGGCGCCTCGAAATGGATCGCCAATCTCAATGGCGAATACCAGTGGCGCCTCGACGACCGCTTCCAACCCTACGTCAGCGCCAGCTACGCCTACCGCTCCGCCGCCGAGGGCACGCTGGACAACTCCGACCTTTCGAAGATCGACGGCTACGCCCTGGTGAACCTCGCCGCCGGTCTGCGCAGCGATCTCGGCGACGGCCAACTGGACACCTCGGTATGGCTGAAGAACGCCTTCGACAAGGACTACTACCTGAGCGCCTTCGCCAGCATCAACGGCTCCTACACCGCATCGGTGGGGCAGCCGCGCACGCTCGGCGTATCGCTGCGCTACGACTTCTGA MKHHYRLPLRRTPPGGSDYALALLLALGGALPASAADAPAPAEEAPPLAGSAPAKADTALGKVTVTARRREEDSQKVPTPITVLGGETLEAQRISRVQDLQQVLPSVNVAYIHARQSSVAVRGIGNNPASDGLEGSAGIYLDNVYLGRPGMAVFDLLDIEQLELLRGPQGTLFGKNTTAGVLNISTRAPTFTAERTVEVSGGQDGYFQGRGTVSGPLGETLAGRLSAYRTRDDGYIKNIHDDNYLNGGERQGARGQLLFEPNEDFSLRWIADYNEEDSSNGSMVVYGGAERFWQRAALVGASPLRDPQRRKVNINGRQHVSVHQGGSSLEANWNLAGGYRLTSISAYRYWHFTPANDEQLNVSAINDTGVEVHDRQFSQEIRLASPTGGAFDYVVGAYAFRQNLGNKTFTSYGPLADLYLLGANLGALNDTYSKANGKIETDSFALFAQGTWHLTERLDFTAGLRGTYEEKNAKVERFAPLGGAAVGGVGAAVRNGQLGAYDSGDLSQYNFAPSALLSLSYQFSDDLLGYASLSHGEKSGGVNLAVGSAPSAGADSLLVGPERANDAELGLKSTLFDRRLLLNANLFWTGIHGYQATTLYQAPGSTQLVQVLANAGSVRSRGLEFEATALPLRGLTLNFNGSYNDVTYLSFKDAPCPAEVSTRPGAPSSCDLTGQRVVGASKWIANLNGEYQWRLDDRFQPYVSASYAYRSAAEGTLDNSDLSKIDGYALVNLAAGLRSDLGDGQLDTSVWLKNAFDKDYYLSAFASINGSYTASVGQPRTLGVSLRYDF Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0193 CDS 221585 222487 + hypothetical protein Class 4 NP_248883.1 15595391 53% similar to taurine dioxygenase TauD [Escherichia coli] Putative enzymes Unknown[Class 3] ; Cytoplasmic[Class 3] PF02668|TauD, Taurine catabolism dioxygenase TauD, TfdA family|15|288|4e-71 COG2175|TauD, Probable taurine catabolism dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism]. ; COG2175|TauD, Probable taurine catabolism dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism]. ; COG2175|TauD, Probable taurine catabolism dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism]. ATGAGCAATGCAGCACAAGCCCTCGCCACGCCGGTACGGCTCGACATCCGGCCGGTCGCCGGACGGATCGGCGCGGAGATTCGCGGCGTGACCCTGTCCGGCGAACTGGACGCCGCCACCGTCGAGGCGATCCAGGCCGCCCTGGTACGCCACAAGGTGATCTTCTTCCGGGACCAGAGCCATCTCGACGACCAGACCCAGGAGGCCTTCGCCCACTTGCTCGGCGAACCGGTTGCCCACCCCACCGTGCCGTCCCGCGAAGGCACCCGCTTCCTCCTCGAGCTGGATGGCGCCGAAGGCCGCCGGGCCAATTCCTGGCATACCGACGTGACCTTCGTCGAGGCCTACCCGAAGGCCTCGATCCTGCGCAGCGTGGTGGCCCCGGAGTCCGGCGGCGACACCGTCTGGGCCAACACGGCGAGCGCCTACGCCGACCTGCCGGCGGAGCTGCGCGAGCTGGCCGACCGGCTCTGGGCGGTGCACAGCAACGAGTACGACTACGCCGGGGTCAAGCCCAGCGCCTCGGTGGAGCAGTTGGAGAACTACCGCAAGGTGTTCACCTCGACCGTCTACGAGACCGAGCACCCGGTGGTCCGCGTGCATCCGCAAAGCGGCGAGCGGACGCTGCTCCTCGGCCACTTCGTGAAACGCCTGAAGGGTCTTTCGCAGCATGACTCGGCGCACCTCTTCGCGGTGCTGCAGGGGCACGTCACGCGCCTGGAGAACACCGTGCGCTGGCGCTGGCAGGCCGGCGACGTGGCGATCTGGGACAACCGCGCGACCCAGCACTACGCGATCGACGACTACGGCGACCAGCCGCGCGTGGTGCGCCGGGTGACCCTCGGCGGCGACGTGCCGGTAGGCATCGACGGGCAACGCAGCCGGACGATCCGGAAGGCATGA MSNAAQALATPVRLDIRPVAGRIGAEIRGVTLSGELDAATVEAIQAALVRHKVIFFRDQSHLDDQTQEAFAHLLGEPVAHPTVPSREGTRFLLELDGAEGRRANSWHTDVTFVEAYPKASILRSVVAPESGGDTVWANTASAYADLPAELRELADRLWAVHSNEYDYAGVKPSASVEQLENYRKVFTSTVYETEHPVVRVHPQSGERTLLLGHFVKRLKGLSQHDSAHLFAVLQGHVTRLENTVRWRWQAGDVAIWDNRATQHYAIDDYGDQPRVVRRVTLGGDVPVGIDGQRSRTIRKA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0194 CDS 222555 223454 + hypothetical protein Class 4 NP_248884.1 15595392 45% similar to taurine dioxygenase TauD [Escherichia coli] Putative enzymes Unknown[Class 3] ; Unknown[Class 3] PF02668|TauD, Taurine catabolism dioxygenase TauD, TfdA family|20|299|3e-53 COG2175|TauD, Probable taurine catabolism dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism]. ; COG2175|TauD, Probable taurine catabolism dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism]. ; COG2175|TauD, Probable taurine catabolism dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism]. ATGAGCCAATCCGCCACCGCCCGGCAACCCGAACCCGAGGTCGCCGAGGCATTCCGCATCACCCCCCTGGAGGCGCCGCTGGGCGCCGAAGTCCGTGGCCTCGACGCGCGCCGGCCGCTGGCGCCGGAGCAGGTCCTGGCGCTCAAGCAGGCGCTGCGCGAGCACCACATCCTGGTGTTCCGCCAGCAGCACCTCGACGATGAGCAGTACTTGCGCTTCGCCACCCTGTTCGGCTCGGTGTTCCAGCCGCCGGCGGACATCCCGGTGCTGTCCTCGGGTGGCGACGGCAAGGTGCCGGACATCGTCAAGGTGGCCAACACCGGCGACGGCGAACTGGGCAACTTCGCCCTGCCGGCACACATCGACCACCAATGGACGCCGGTGCCGTCCTCCGGCTCGTTCCTCTACGCACTGGAGGTGCCGTCCAGTGGCGGCGAGACGCGCTTCACCAACCTGGCGCGCGCCTACGAGAGCCTCGACGAGGCGACCCGGCGCGAGATCGATGGCCTGCGCCTGATCAACTACAACCCCTTCATCCGCCTGCGCGAGGGCGGCTACGGCGGCGGTTTCGCCACCTACCGCACGCCGGACATCGAACCGATCCAGGGCAGCGAGCACCCGCTGGTACGCACCCACCCGGAAAGCGGCCGGCGCGTACTGTTCCTCAGCGCCCACACCGAGGTGGAGATTCCCGGCTACGACCCCGCGCGGGGCCAGGCGCTGATCGGTCGCCTGCGCGAACATCTGGCGCGCCCGGAACTGAGCTACAGCCACGCCTGGTCGGTGGGCGACATCGTCTGGTGGGACAACCAGGCCGTGCTGCATGCGCGCAACGCCTTCCCGGCCAGCGAGCGGCGGCGCCTGAAGCGCATCAGCCTGGCGGGCAGCCGTCCGTTCTGA MSQSATARQPEPEVAEAFRITPLEAPLGAEVRGLDARRPLAPEQVLALKQALREHHILVFRQQHLDDEQYLRFATLFGSVFQPPADIPVLSSGGDGKVPDIVKVANTGDGELGNFALPAHIDHQWTPVPSSGSFLYALEVPSSGGETRFTNLARAYESLDEATRREIDGLRLINYNPFIRLREGGYGGGFATYRTPDIEPIQGSEHPLVRTHPESGRRVLFLSAHTEVEIPGYDPARGQALIGRLREHLARPELSYSHAWSVGDIVWWDNQAVLHARNAFPASERRRLKRISLAGSRPF Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0195 CDS 224101 225217 + pntAA putative NAD(P) transhydrogenase, subunit alpha part 1 Class 2 NP_248885.1 15600764 PMID:86274751 ; PMID:15687295 ; PMID:3525165 adjacent to pntB, as in E. coli. 61% similar to NAD(P)(+) transhydrogenase subunit alpha [Escherichia coli] 3 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Energy metabolism ; Transport of small molecules Cytoplasmic Membrane[Class 2] ; Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0006091|generation of precursor metabolites and energy|ISS ; biological_process|GO:0006810|transport|ISS ; biological_process|GO:0055114|oxidation reduction|IEA ; molecular_function|GO:0008750|NAD(P)+ transhydrogenase (AB-specific) activity|IEA TIGR00561|pntA|NAD(P)(+) transhydrogenase (AB-specific), alpha subunit|equivalog|5.4e-48|1.6.1.2|Energy metabolism|Electron transport PF05222|AlaDh_PNT_N, Alanine dehydrogenase/PNT, N-terminal domain|4|136|5e-46 COG3288|PntA, NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]. ; COG3288|PntA, NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]. ; COG3288|PntA, NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]. GTGCAGATCGGTGTCCCCCTCGAGACCCATGCCGGTGAGACGCGGGTTTCCGCCACCCCGGAAACCGTCAAGAAGCTGATCGGCCAAGGCCACCAGGTGATCGTCCAGAGCGGCGCCGGCGTCAGCGCCAGCCAGCCGGACAGTGCCTATGAAGCCGCCGGCGCGACGATCGGCAGCGCCGCCGAGGCCTTCGGCGCCGACCTGGTGCTGAAGGTGGTCGCGCCCAGCGCCGCCGAGCTGGCCCAGATGAAAAGCGGCGCCGTGCTGGTCGGCATGCTCAACCCCTTCGACAACGAGAACATCGCCCGCATGGCCGAGCGCGGCATCACCGCCTTCGCCCTCGAGGCCGCGCCGCGTACCTCGCGGGCGCAGAGCCTGGACGTGCTCTCCTCGCAGGCCAACATCGCCGGCTACAAGGCGGTGATGCTCGCCGCCAACCACTACCCGCGCTTCATGCCGATGCTGATGACCGCCGCCGGCACCGTGAAGGCCGCCCGCGTGCTGATCCTCGGCGCCGGCGTCGCCGGCCTGCAGGCGATCGCCACGGCCAAGCGCCTGGGCGCGGTGATCGAGGCTTCCGACGTGCGTCCGGCGGTGAAGGAGCAGATCGAGTCGCTCGGCGCCAAGTTCGTCGACGTGCCCTACGAGACCGACGAAGAGCGCGAGTGCGCCGAAGGCGTCGGCGGCTACGCGCGGCCGATGCCGGCCTCGTGGATGGAGCGCCAGGCCAAGGCCGTGCACGAGCGCGCCAAGCAGTCGGACATCGTCATCACCACCGCGCTGATCCCCGGCCGCAAGGCGCCGACGCTGCTGCACGAGGCGACCGTGGCGGAGATGAAGCCGGGCTCGGTGGTCATCGACCTGGCCGCCGCCCAGGGCGGCAACTGCCCGCTGACCGAGGCCGACCAGGTCGTGGTCCGGCACGGCGTGACCATCGTCGGCCACAGCAACCTGGCCGCGCTGGTACCGGCGGACGCCTCGGCGCTATACGCGCGCAACATCCTCGATTTCCTCAAGCTCACCCTGAACGCCGAAGGCTTCAGCGTGAACCTCGAGGACGACATCGTCGCCGCCTGCCTGATGTGCCGCGACGGCCAGGCGGTGCGCAAGAACGGCT MQIGVPLETHAGETRVSATPETVKKLIGQGHQVIVQSGAGVSASQPDSAYEAAGATIGSAAEAFGADLVLKVVAPSAAELAQMKSGAVLVGMLNPFDNENIARMAERGITAFALEAAPRTSRAQSLDVLSSQANIAGYKAVMLAANHYPRFMPMLMTAAGTVKAARVLILGAGVAGLQAIATAKRLGAVIEASDVRPAVKEQIESLGAKFVDVPYETDEERECAEGVGGYARPMPASWMERQAKAVHERAKQSDIVITTALIPGRKAPTLLHEATVAEMKPGSVVIDLAAAQGGNCPLTEADQVVVRHGVTIVGHSNLAALVPADASALYARNILDFLKLTLNAEGFSVNLEDDIVAACLMCRDGQAVRKNG* Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0195.1 CDS 225295 225603 + pntAB putative NAD(P) transhydrogenase, subunit alpha part 2 Class 2 NP_248886.2 119167455 Cytoplasmic Membrane[Class 3] COG3288|PntA, NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]. ; COG3288|PntA, NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]. ATGGATATCATTTCTGACGGGATCTACAACCTGATCATCTTCGTGCTGGCCGTGTACGTCGGCTACCACGTGGTATGGAACGTCACCCCTGCCTTGCACACCCCGCTGATGGCGGTGACCAACGCGATTTCCGCGATCGTCATCGTCGGCGCCATGCTCGCCGCCGCCCTGACCGTGACCCCGCTGGGCAAGGCCATGGGCACCCTCGCCGTGGCCCTGGCCGCGGTCAATGTGTTCGGTGGCTTCCTGGTCACCCGGCGCATGCTGGAAATGTTCAAGAAGAAAGCGCCGAAGGCGG MDIISDGIYNLIIFVLAVYVGYHVVWNVTPALHTPLMAVTNAISAIVIVGAMLAAALTVTPLGKAMGTLAVALAAVNVFGGFLVTRRMLEMFKKKAPKA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0196 CDS 225603 227039 + pntB pyridine nucleotide transhydrogenase, beta subunit Class 2 NP_248887.1 15595393 PMID:86274751 ; PMID:92339464 ; PMID:15687295 ; PMID:3525165 ; PMID:1633824 Adjacent to pntA homolog, as in E. coli 69% similar to pyridine nucleotide transhydrogenase, beta subunit [Escherichia coli] 8 predicted transmembrane helices ; 8 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Nicotinate and nicotinamide metabolism [PseudoCAP] ; NAD phosphorylation and dephosphorylation [PseudoCyc] 1.6.1.1 Transport of small molecules ; Energy metabolism Cytoplasmic Membrane[Class 2] ; Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0006091|generation of precursor metabolites and energy|ISS ; biological_process|GO:0006810|transport|ISS ; molecular_function|GO:0008750|NAD(P)+ transhydrogenase (AB-specific) activity|RCA PF02233|PNTB, NAD(P) transhydrogenase beta subunit|4|477|1e-171 COG1282|PntB, NAD/NADP transhydrogenase beta subunit [Energy production and conversion]. ; COG1282|PntB, NAD/NADP transhydrogenase beta subunit [Energy production and conversion]. ; COG1282|PntB, NAD/NADP transhydrogenase beta subunit [Energy production and conversion]. ATGAGCATGAACCTGGTCACCCTCCTGTACCTCATCGCCTCGGTCTGCTTCATCCAGGCCCTGAAAGGCCTGTCGCACCCGACCACCTCGCGCCGCGGCAACCTCTTCGGCATGGTCGGCATGGCCATCGCCGTGGCCACCACCGTCGGCCTGGTGTTCAAGCTGGGCGCGGAGATCGCCACCACCGGCGTCGGCTACATCGTCGTCGGCCTGCTGGTCGGCGGTACCGCCGGCTCAATCATGGCCAAGCGCGTCGAGATGACCAAGATGCCCGAGCTGGTCGCCTTCATGCACAGCATGATCGGCCTGGCCGCGGTGTTCATCGCCATCGCCGCGGTGGTCGAGCCGCAGTCGCTGGGGATCGTCGCGCACCTGGGCGACACCATTCCCACCGGCAACCGCCTGGAGCTGTTCCTCGGCGCGGCCATCGGCGCCATCACCTTCTCCGGTTCGGTGATCGCCTTCGGCAAGCTCTCCGGCAAGTACAAGTTTCGCCTGTTCCAGGGCACCCCGGTGCAGTTCTCCGGGCAGCACCTGCTGAACCTGGTGCTCGGCCTGGCAACCCTCGGCCTGGGCCTGGTGTTCATGTTCACCGGCAACCTCACCGCCTTCGCCGTGATGCTGGCGCTGGCCTTCGTCCTCGGCGTGCTGATCATCATCCCCATCGGCGGCGCCGACATGCCGGTGGTGGTGTCGATGCTCAACTCCTATTCCGGCTGGGCCGCGGCGGGTATCGGCTTCTCGCTGAACAACTCGATGCTGATCATCGCCGGCTCGCTGGTCGGCTCCTCGGGCGCGATCCTCTCCTACATCATGTGCAAGGCGATGAACCGCTCGTTCTTCAACGTCATCCTCGGCGGCTTCGGCGCCGAAGCCGACGCCGGCGGCCCGGCGGGCTCCAAGGAGCAGCGTCCGGTGAAGTCCGGTTCGGCCGACGATGCCTCGTTCCTGCTGACCAACGCCGACAGCGTGATCATCGTCCCCGGCTACGGCCTGGCGGTGGCCCGTGCCCAGCACGCGCTGATGGAACTGGCGGAGAAGCTGACCCATCGCGGGGTCACCGTGAAGTTCGCCATCCACCCGGTCGCCGGGCGCATGCCGGGGCACATGAACGTGCTGCTGGCCGAGGCCGAGGTGCCCTACGAGCAGGTGTTCGAGATGGAGGACATCAACTCCGAGTTCGGCCAGACCGACGTGGTCCTGGTGCTCGGTGCCAACGACGTGGTCAACCCGGCGGCGAAGAACGATCCGAAGTCGCCCATCGCCGGCATGCCGATCCTCGAGGCCTACAAGGCCAAGACCGTGATCGTCAACAAGCGCTCCATGGCCAGCGGCTACGCCGGCCTGGACAACGAGCTGTTCTACCTGGACAAGACCATGATGGTGTTCGGTGACGCCAAGAAAGTCATCGAAGACATGGTCAAGGCGGTGGAGTGA MSMNLVTLLYLIASVCFIQALKGLSHPTTSRRGNLFGMVGMAIAVATTVGLVFKLGAEIATTGVGYIVVGLLVGGTAGSIMAKRVEMTKMPELVAFMHSMIGLAAVFIAIAAVVEPQSLGIVAHLGDTIPTGNRLELFLGAAIGAITFSGSVIAFGKLSGKYKFRLFQGTPVQFSGQHLLNLVLGLATLGLGLVFMFTGNLTAFAVMLALAFVLGVLIIIPIGGADMPVVVSMLNSYSGWAAAGIGFSLNNSMLIIAGSLVGSSGAILSYIMCKAMNRSFFNVILGGFGAEADAGGPAGSKEQRPVKSGSADDASFLLTNADSVIIVPGYGLAVARAQHALMELAEKLTHRGVTVKFAIHPVAGRMPGHMNVLLAEAEVPYEQVFEMEDINSEFGQTDVVLVLGANDVVNPAAKNDPKSPIAGMPILEAYKAKTVIVNKRSMASGYAGLDNELFYLDKTMMVFGDAKKVIEDMVKAVE Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0197 CDS 227382 228194 + hypothetical protein Class 4 NP_248888.1 15595394 PMID:96262716 ; PMID:15687295 ; PMID:8704984 Adjacent to homologs of ExbB and ExbD. 43% similar to a region of TonB [Pseudomonas aeruginosa] 1 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Transport of small molecules Cytoplasmic Membrane[Class 3] ; Periplasmic[Class 3] biological_process|GO:0006810|transport|IEA ; molecular_function|GO:0015570|energizer of outer membrane receptor-mediated transport activity|IEA TIGR01352|tonB_Cterm|TonB family C-terminal domain|subfamily_domain|2.8e-34||Transport and binding proteins|Cations and iron carrying compounds PF05518|Totivirus_coat, Totivirus coat protein|76|167|9e-05 COG0810|TonB, Periplasmic protein TonB, links inner and outer membranes [Cell envelope biogenesis, outer membrane]. ; COG0810|TonB, Periplasmic protein TonB, links inner and outer membranes [Cell envelope biogenesis, outer membrane]. ; COG0810|TonB, Periplasmic protein TonB, links inner and outer membranes [Cell envelope biogenesis, outer membrane]. ATGGCAACACCCCAGCCCGTCGATGCCCGCACGCAGCCCTGGCGCGAGACGCCCGGCGGCGACCTGGTGGCGCTCGGTCGGCCGGTTCGCCAGGCGTTGCACCTGGTTCGCCACAACCCGGCACAGGGTCGGGTGCTCAGCCGGCGCGAGACGATCCTGCTGGTCCTGTTCGCCCTGACCCTGCACGGAGCGGTGATCCATTGGCTGAGCCAGCAGAGAACCCCGGCGCTGCCCGAGGTGCCGCCACAGGTGCCGCCGATGACCATCGAGTTCACCGCCCCGGCGCCGCCGGTGGTGGAACCGCCGCCGCCCGAGCCGTTGCCGCCGGTGGTCGAGGAACCGCCACCACCGGTGGTCGACGAGAACGCGGTGAAGCCGCCGCCGCCGAAGCCGGTGCCAAAGCCGAAACCCAAGCCCAAGCCGCAACCCCGGCCCAAGCCGGCGCCGAAGGCCGTCGAGCCGGCTCCGCCCGCGCCGCCGCAACCCGCCGCGCCACCCGCCCCGCCGGCGCCGGCCGCCGCCCCGGCGCCGCTGACGCCGCCGTCGGCGAACGCCGGCTACCTGCACAACCCGGCGCCGGAATACCCCGCCCTGGCCATGCGCCGCGGCTGGGAGGGCACCGTGCTGTTGCGGGTGCATGTCCTCGCCAGCGGCAGCCCGAGCGAGATCCAGGTGCAGAAGTCGAGCGGACGCGAAGCCCTCGACCAGGCCGCGGTGAAAGCGGTCAAGCGCTGGTCCTTCGTTCCCGCCAAGCGCGGCGACAAGGCCGAGGACGGCTGGGTCAGCGTACCGATCGATTTCAAGTTGAACTGA MATPQPVDARTQPWRETPGGDLVALGRPVRQALHLVRHNPAQGRVLSRRETILLVLFALTLHGAVIHWLSQQRTPALPEVPPQVPPMTIEFTAPAPPVVEPPPPEPLPPVVEEPPPPVVDENAVKPPPPKPVPKPKPKPKPQPRPKPAPKAVEPAPPAPPQPAAPPAPPAPAAAPAPLTPPSANAGYLHNPAPEYPALAMRRGWEGTVLLRVHVLASGSPSEIQVQKSSGREALDQAAVKAVKRWSFVPAKRGDKAEDGWVSVPIDFKLN Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0198 CDS 228223 228942 + exbB1 transport protein ExbB Class 2 NP_248889.1 15595395 PMID:98037510 ; PMID:89359155 ; PMID:15687295 ; PMID:2670903 ; PMID:9371459 55% similar to ExbB [Xanthomonas campestris] DM01638: TOLQ PROTEIN ; 3 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Transport of small molecules Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0006810|transport|ISS ; biological_process|GO:0009405|pathogenesis|IEA ; biological_process|GO:0015992|proton transport|IEA ; cellular_component|GO:0005887|integral to plasma membrane|IEA ; molecular_function|GO:0015078|hydrogen ion transmembrane transporter activity|IEA TIGR02796|tolQ|protein TolQ|equivalog|8.1e-39||Transport and binding proteins | Cellular processes|Other | Pathogenesis PF01618|MotA_ExbB, MotA/TolQ/ExbB proton channel family|74|205|8e-31 COG0811|TolQ, Biopolymer transport proteins [Intracellular trafficking and secretion]. ; COG0811|TolQ, Biopolymer transport proteins [Intracellular trafficking and secretion]. ; COG0811|TolQ, Biopolymer transport proteins [Intracellular trafficking and secretion]. ATGAGTCTGTTAACCACCCCGCTCGAATCCGTCGAAGGCGCCGTCATCTGGCTGCTGGTCGGCTTTTCCGTGGTCACCTGGGGCCTGGCCCTGGTCAAGGGCGTGCAGTTCGCCCGGCAGAAGCGCCAGGACCGGCAGTTCCAGAAGCAGTTCTGGAGCGCCACCAGCCTCGACTCCGCCGGCGAGCAGGCGCAGGACAAGCAGGGCGCCGGCGCCCGCGTGGCCCAGGCCGGCTTCGCCGCGATCCAGGTGCAGGACAACGGCCAGCCCGACCTGGCCCAGTCGATCAACCACCAGGACCGTCTCGAACGCGCCCTGCGCCAGCAGATCCAGCGCGAGCGGCGTTCCCTGGAGTCGGGCCTGGCGGTGCTCGCCTCGATCGGCTCGACCTCGCCCTTCATCGGTCTGTTCGGCACCGTCTGGGGCATCATGGAGGCGCTCAAGGGGATCAGCGCGGCCGGCTCGGCGAGCCTGGAGACCGTGGCCGGGCCGATCGGCAGCGCGCTGATCGCCACCGGCGTGGGAATCGCCGTCGCGGTGCCGGCGGTGCTGGTCTACAACTACTTCCTGCGGCGCCTGAAGCTGACCGCCGCCGACCTCGACGACTTCGCCCACGACTTCTACAGCCTGGCGCAGAAGAGCGCGTTCCGCGTCATCGTCCATCCCTCCGCCGCGCGCCAGGCCGGCAACCCCTCGCGCAACGTGAAGGAGGCGTCCTGA MSLLTTPLESVEGAVIWLLVGFSVVTWGLALVKGVQFARQKRQDRQFQKQFWSATSLDSAGEQAQDKQGAGARVAQAGFAAIQVQDNGQPDLAQSINHQDRLERALRQQIQRERRSLESGLAVLASIGSTSPFIGLFGTVWGIMEALKGISAAGSASLETVAGPIGSALIATGVGIAVAVPAVLVYNYFLRRLKLTAADLDDFAHDFYSLAQKSAFRVIVHPSAARQAGNPSRNVKEAS Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0199 CDS 228944 229345 + exbD1 transport protein ExbD Class 2 NP_248890.1 15595396 PMID:89359155 ; PMID:93172953 ; PMID:15687295 ; PMID:2670903 ; PMID:8437515 60% similar to inner-membrane protein ExbD [Pseudomonas putida] 1 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Transport of small molecules Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0006810|transport|ISS ; biological_process|GO:0015992|proton transport|IEA ; biological_process|GO:0016044|membrane organization|IEA ; cellular_component|GO:0031237|intrinsic to external side of plasma membrane, in periplasmic space|IEA ; molecular_function|GO:0015078|hydrogen ion transmembrane transporter activity|IEA TIGR02801|tolR|protein TolR|equivalog|1.3e-41||Transport and binding proteins | Cellular processes|Other | Pathogenesis PF02472|ExbD, Biopolymer transport protein ExbD/TolR|8|133|5e-21 COG0848|ExbD, Biopolymer transport protein [Intracellular trafficking and secretion]. ; COG0848|ExbD, Biopolymer transport protein [Intracellular trafficking and secretion]. ; COG0848|ExbD, Biopolymer transport protein [Intracellular trafficking and secretion]. ATGGCCTTCTCGACCCAGGACAGCGACGAAGTCCTTTCCGAAATCAACGTCACCCCGCTGGTCGACGTGATGCTGGTGCTGCTGGTGGTGTTCATCGTCACCGCGCCGCTGCTGACCAACTCGATCCCGATCAACCTGCCGAAGACCGAATCGGTGGCCCCGCCGGAGCAGAAGGATCCCCTGGTGGTGAGCATCGATGGCGCCGGCAAGCTGTTCGTCAACAAGGACGAGATCCAGCCGGAGCTGCTGGAGAGCAACCTGGCCGCGGCCAAGGCGAAGGACGCCGAGGTCCGCGTGCAGTTGCAGGCCGACGAAGGGGTGAACTACGGCCAGGTGGCGAAGGCCATGGCTTCCATCGAGCGCGCCGGGATCACCAGGCTGGCGGTGATCACCGCACGCTGA MAFSTQDSDEVLSEINVTPLVDVMLVLLVVFIVTAPLLTNSIPINLPKTESVAPPEQKDPLVVSIDGAGKLFVNKDEIQPELLESNLAAAKAKDAEVRVQLQADEGVNYGQVAKAMASIERAGITRLAVITAR Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0200 CDS 229526 229738 - hypothetical protein Class 4 NP_248891.1 15595397 Hypothetical, unclassified, unknown Cytoplasmic[Class 3] ; Unknown[Class 3] ATGGCCAAGAAATTTCCTCTCCATCCCAGCCATCCGGAGCGCATCTGCTGGGGTTGCGACCGCTATTGCTCGGCGGAATCTATGGGCTGCGGCAACGGCGCCAGCCGCACCCAGCATCCCAGCGAACTGTTCGGCGAGGACTGGGCCGGTGAATGGGAAGTCGAAGGAACGGAGGACGCCAAGGAGCAGGAGGCGCCGGCACGCCAGGCCTGA MAKKFPLHPSHPERICWGCDRYCSAESMGCGNGASRTQHPSELFGEDWAGEWEVEGTEDAKEQEAPARQA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0201 CDS 229954 230535 + hypothetical protein Class 4 NP_248892.1 15595398 49% similar to hypothetical protein [Clostridium beijerinckii] Hypothetical, unclassified, unknown Unknown[Class 3] ; Unknown[Class 3] PF06821|DUF1234, Alpha/Beta hydrolase family of unknown function (DUF1234)|8|180|7e-65 COG3545|COG3545, Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]. ; COG3545|COG3545, Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]. ; COG3545|COG3545, Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]. ATGCACAGCGAACGCGTCCGTTATGTGTTGGTGCCCGGTTGGTACGGCTCGGAAGACGCCCATTGGCAAAGTCACTGGCAGCGCGCGCTGCCCAATGCCTCACGGGTCGAGCAACAGGACTGGATCACCCCGCTGCGCGCCGACTGGATCGCCGAGCTGGACGCCGAGATCCGCCGCCAGCCCGGGCCGGTGGTGCTGATCGCGCACAGCCTGGGTTGTGTGACAGTGGCGCTGTGGGCGGCCCAGGCCGAGCGCCGGGTGCGCGACCAGGTACGCGGCGCCCTGCTGGTGGCGCCGGCCGACGTCGAGCGCGAGAGCTGCGCCGAGGCGCTGCGCAACTTCGCGCCGATCAGCCGCGAGCCGTTGCCGTTCCCCAGCGTGCTGGTGGGTTCCGACAACGACCAGGCCTGCAGCCCGCAGCGCGCCATGCACCTGGCCCGCGCCTGGGGCGCGGAGACGGTGATCCTGCCCGAGGCCGGGCACATCAACGTGAAGTCCGGCCACGGCGCCTGGGAGGCCGGCTACCGTCACCTGTTCCGCTTGCAGTACCTGATCGACAGCCAGGCCCGTCGCCGCGCCTGA MHSERVRYVLVPGWYGSEDAHWQSHWQRALPNASRVEQQDWITPLRADWIAELDAEIRRQPGPVVLIAHSLGCVTVALWAAQAERRVRDQVRGALLVAPADVERESCAEALRNFAPISREPLPFPSVLVGSDNDQACSPQRAMHLARAWGAETVILPEAGHINVKSGHGAWEAGYRHLFRLQYLIDSQARRRA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0202 CDS 230543 232000 - probable amidase Class 3 NP_248893.1 15595399 47% similar to enantiomerase-selective amidase [Rhodococcus sp.] BL00571: Amidases proteins aldoxime metabolism [PseudoCyc] Putative enzymes Unknown[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0006424|glutamyl-tRNA aminoacylation|IEA ; cellular_component|GO:0030956|glutamyl-tRNA(Gln) amidotransferase complex|IEA ; molecular_function|GO:0050567|glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|IEA TIGR00132|gatA|glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit|subfamily|2.5e-64|6.3.5.-|Protein synthesis|tRNA aminoacylation PF01425|Amidase, Amidase|35|462|9e-76 COG0154|GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis]. ; COG0154|GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis]. ; COG0154|GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis]. ATGAAGCCCAACCCTCCGATCAACGAGCTGGTCCTGCTCCAGGCCCACCAGCTTGCCGAACGCATCCGCCTGCGCCAGGTGTCCTGCCGCGAGGTGATGCAGGCCTACCTGGCGCATATCGAGCGCTTCAACCCACGGGTCAACGCCCTGGTCAGCCTGCTGCCGGCGGAACGCCTGCTGGAAGAGGCGGACGCGCGCGACGGCGAACTCGCCCGTGGCGAATGGCGTGGCTGGATGCACGGTCTGCCACATGCCATCAAGGACCTGTCGCTGACCCGCGGCATCCGCACCACCCTCGGCTCGCCGCTGTACCGCGACTACATTCCCGAGCGCGACGGGATCATGGTGGAGCGGATCAGGGCCGCCGGCGCGATCCTCATCGGCAAGACCAACACCCCCGAGTTCGGCCTCGGCTCGCAGACCTACAACCCACTGTTCGGCGCCACCGCCTGCGCCTACGACGAACGCCTCAGCGCCGGCGGCAGCAGCGGCGGAGCCGCCGCTGCCCTCGCGCTGCACCTGGTACCGGTGGCCGACGGCAGCGACATGATGGGCTCGCTGCGCAACCCGGCGGCCTTCAACAACGTCATCGGCTTCCGCCCTTCCCAAGGCCGCGTACCGTTCGACGACAGCGCCGACCTGTTCTTCGACCAGCTCGGCTACGAAGGCCCGATGGGCCGCAGCGTGCGCGACACCGCCCTGCTGCTCTCGGTGCAGGCCGGCGCCGATCGCCGCGCGCCGCTATCCATCGCCGAACCCGGCGCGCGGTTCGCCGCACCGCTGGAGCGCGATTTCGAAGGCACCCGGCTGGGCTGGCTGGGCGACCTCGACGGCTACCTGCCTATGCAGGACGGCATCCTCCAAATGTGCCAGCGCGCGCTAGGCGATTTCCGCAGCCTCGGCTGCGAGATCGAAGAAGCGAACCTCGGCTTCGCCCCGGAGCGCCTCTGGGAATGCTGGCGCACCTTGCGCCACTGGCTGGTGGCCGGCTCGCTCGGCGGCGTGCATGCCGATCCGGCGAAGCGTGCCCTGCTGAAGCCGGAAGCGCTCTGGGAGGTGGAGAACGGGCTGCGCCTGGGCGCCGACGCGGTCTTTCGCGCGTCGGTCATCCGCAGCGACTGGTATCGCGCCATCGGCCGGCTGTTCGAGCGCTACGACTACCTGTTGCTGCCCAGCGCGCAGGTATTTCCCTTCGCCAAGGAAACCCCCTGGCCGCGCAGCATCGAAGGCGTGGCAATGGACACCTACCACCGCTGGATGGAAGTGGTGGTTCCCGGCAGCCTGTCCGGCTGCCCGGTGGCCAACGTGCAGGCGGGCTTCAATGCCGAGGGACTGCCGATGGGCCTGCAAATCATCGGTCCGCACCAGGCCGACTTCGCGGTACTGCAACTGGCCCACGCCTACGAGCGGGCCAGCCGCTGGTTCGAGCGCCAGCCGTCGCCGCTGCTGGCGAACTGA MKPNPPINELVLLQAHQLAERIRLRQVSCREVMQAYLAHIERFNPRVNALVSLLPAERLLEEADARDGELARGEWRGWMHGLPHAIKDLSLTRGIRTTLGSPLYRDYIPERDGIMVERIRAAGAILIGKTNTPEFGLGSQTYNPLFGATACAYDERLSAGGSSGGAAAALALHLVPVADGSDMMGSLRNPAAFNNVIGFRPSQGRVPFDDSADLFFDQLGYEGPMGRSVRDTALLLSVQAGADRRAPLSIAEPGARFAAPLERDFEGTRLGWLGDLDGYLPMQDGILQMCQRALGDFRSLGCEIEEANLGFAPERLWECWRTLRHWLVAGSLGGVHADPAKRALLKPEALWEVENGLRLGADAVFRASVIRSDWYRAIGRLFERYDYLLLPSAQVFPFAKETPWPRSIEGVAMDTYHRWMEVVVPGSLSGCPVANVQAGFNAEGLPMGLQIIGPHQADFAVLQLAHAYERASRWFERQPSPLLAN Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0203 CDS 232066 233100 - probable binding protein component of ABC transporter Class 3 NP_248894.1 15595400 PMID:15687295 1 of 4 contiguous ORFs that look like a ABC-type polyamine transporter. 52% similar to spermidine/putrescine periplasmic transport protein PotD [Escherichia coli] PR00909: Bacterial periplasmic spermidine/putrescine-binding protein signature ; type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 22) ; type I export signal computationally predicted by Phobius (cleavage after residue 22) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 22) ; Export across inner membrane confirmed by PhoA fusion screen Transport of small molecules Periplasmic[Class 2] ; Periplasmic[Class 3] ; Periplasmic[Class 3] PF01547|SBP_bac_1, Bacterial extracellular solute-binding protein|37|284|7e-10 COG0687|PotD, Spermidine/putrescine-binding periplasmic protein [Amino acid transport and metabolism]. ; COG0687|PotD, Spermidine/putrescine-binding periplasmic protein [Amino acid transport and metabolism]. ; COG0687|PotD, Spermidine/putrescine-binding periplasmic protein [Amino acid transport and metabolism]. ATGCATCAACGGATCGCAAGCATCGGCCTCGGCCTCACCCTGGCCCTGGGCGGCAGCGCCCAGGCCGCCGGGCAACTCAACGTAGTCAGCTGGAGCGGCTACTTCTCGCCGCAGTTGCTGGAGAAATTCGAGAAGGAAAGCGGCATCCGCGTCACGGTGGACTCCTATGACTCCAACGAAACCCTGCTGGCCAAGCTCAAGCAGGGCGGCGCCGGCTACGACGTGGCGATTCCTTCGCAGCAGTTCGTTCCGATCCTGGTCAAGGAAGCATTGCTCGAGCGCTTCGACCCGGCCGCCGAGCCGTACTACGCCAACCTGCTCGACAACCTGAAGAAGCCCGCCTGGGACCCGGAGGGCGCCTACAGCGTGCCCTTCATCTGGGGCACCACCAGCGTGGTGCTGGATGGCGCGCGCTACGCCGGCCCGGCCGACAGCTACGCGGTGCTCTACCAGCCGCCGGAAGAACTGCGCGGTCGGATCAACATGTTCGACTCGGTGAGCGAGGTGGTCGACATGGCCAGCCTGTACCTGGGCATCCCGCTCTGTAGCGCGGACCCGAAGCAGATGCAGCGCGTCCTCGAACTGCTCAAGGCGCAGAAACCCTTCGTCAAGACCTACAGCTCCAAGGCCGGCTCGATCCGCGAGAACCTCGCCGCAGGCGAGGTGGACATGTCGATGTTCTGGGGCGGCTCGTCGATGCGTGCGCGCGAACTCAAGCCGAGCCTGAAGTACCTGTATCCGAAGGAAGGCGTGCTGGCCTGGGTGGACAACCTGGTAATCCCGCGCGGCAGCCGCAACCCGGACAACGCGCGGCGCTTCATCGCCTTCCTCGCTCAGCCGGAGAACGCCGCGCTGACCCAGAACTTCCTCAAGCACCAGAGCCCGGTGAAGGGCGTCGAGCCCTACCTCGACGCCAGTCTCAAGGACGCCCCGGAGCTGCACGTCCCCGCCGGTACCCGCGTGGTGTTCAGCCAGACCTGCGGCGAAGACGCGATCCGCCTCGCCGACCGCCTGTGGACCAACCTGATGCGCTGA MHQRIASIGLGLTLALGGSAQAAGQLNVVSWSGYFSPQLLEKFEKESGIRVTVDSYDSNETLLAKLKQGGAGYDVAIPSQQFVPILVKEALLERFDPAAEPYYANLLDNLKKPAWDPEGAYSVPFIWGTTSVVLDGARYAGPADSYAVLYQPPEELRGRINMFDSVSEVVDMASLYLGIPLCSADPKQMQRVLELLKAQKPFVKTYSSKAGSIRENLAAGEVDMSMFWGGSSMRARELKPSLKYLYPKEGVLAWVDNLVIPRGSRNPDNARRFIAFLAQPENAALTQNFLKHQSPVKGVEPYLDASLKDAPELHVPAGTRVVFSQTCGEDAIRLADRLWTNLMR Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0204 CDS 233123 233932 - probable permease of ABC transporter Class 3 NP_248895.1 15595401 PMID:15687295 1 of 4 contiguous ORFs that look like a polyamine ABC-type transporter. 62% similar to putrescine transport system permease protein PotI [Escherichia coli] 6 predicted transmembrane helices ; PS00402: Binding-protein-dependent transport systems inner membrane component signature ; 7 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Membrane proteins ; Transport of small molecules Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0015689|molybdate ion transport|IEA ; cellular_component|GO:0005887|integral to plasma membrane|IEA ; cellular_component|GO:0055052|ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing|IEA ; molecular_function|GO:0015412|molybdate transmembrane-transporting ATPase activity|IEA TIGR02141|modB_ABC|molybdate ABC transporter, permease protein|equivalog|2e-11||Transport and binding proteins|Anions PF00528|BPD_transp_1, Binding-protein-dependent transport system inner membrane component|72|230|3e-06 COG1177|PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism]. ; COG1177|PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism]. ; COG1177|PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism]. ATGATCGCGCGCCTGTGGAAAGGCAGCCGCCATAACGTCCAGGACTTCCCCGGCTTCGGTGCCTTCAGCTTGTTGTTCTACCTGTACCTGTACGCGCCGATCCTGGTGCTGGTGGTGTACTCCTTCAACGCCAACCAGTCGGCCACCGTCTGGACCGGCTTCAGCCTCGACTGGTACCGCGCCGCCTTCGCCAACCAGGCGCTGCGCCAGGCCGCCGGCAACAGCCTGCTGATCGCCGTGTGCGCCAGCGCCGCGGCCACCGCGATCGCCACCCTGGCCGCCCTCGGCACCTCGCGTGGGGCGAAGTTCAGGGGCCTGCGCCTGTCGATGGGAGCGATCATGCTGCCCCTGGTGCTGCCGGAAATCGTGGTCGGGGTCGCCACCCTGGCGCTGTTTTCCACCGTCGGGCTGTCTCTCGGCTACGGCAACCTGATCATCGCCCACACGGTGTTCTGCATCCCGTTCGCCTACCTGCCGATCCGTGCCCGCCTGGATGACATGGACCTTTCCCTGGAGCAGGCCGCCGCCGACCTCTACGCCGGTCCGTGGCGGACCCTGCGCAAGGTGACGCTGCCGCTGCTGGCGCCGGGCATCTTCTCCGGCCTGATGCTCGCCTTCATCGTCTCGCTGGACAACTTCGTGATCTCGATGATGGTCTCGCAGGCCGGCACCACCACCCTGCCGATCTTCATCTTCGGACTGCTGCGGATGGGCGTCACGCCCGACGTCAACGCCGTGTCGACGTTGATCCTCGGCGTCTCCGTGATCTTCGTCAGCCTTTCCTACCTGCTCGGCAAGCCACGCGCCTGA MIARLWKGSRHNVQDFPGFGAFSLLFYLYLYAPILVLVVYSFNANQSATVWTGFSLDWYRAAFANQALRQAAGNSLLIAVCASAAATAIATLAALGTSRGAKFRGLRLSMGAIMLPLVLPEIVVGVATLALFSTVGLSLGYGNLIIAHTVFCIPFAYLPIRARLDDMDLSLEQAAADLYAGPWRTLRKVTLPLLAPGIFSGLMLAFIVSLDNFVISMMVSQAGTTTLPIFIFGLLRMGVTPDVNAVSTLILGVSVIFVSLSYLLGKPRA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0205 CDS 233929 234849 - probable permease of ABC transporter Class 3 NP_248896.1 15595402 PMID:15687295 1 of 4 contiguous ORFs that look like a polyamine ABC-type transporter. 60% similar to spermidine/putrescine transport system permease PotB [Escherichia coli] 6 predicted transmembrane helices ; PS00402: Binding-protein-dependent transport systems inner membrane component signature ; 6 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Membrane proteins ; Transport of small molecules Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0015689|molybdate ion transport|IEA ; cellular_component|GO:0005887|integral to plasma membrane|IEA ; cellular_component|GO:0055052|ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing|IEA ; molecular_function|GO:0015412|molybdate transmembrane-transporting ATPase activity|IEA TIGR02141|modB_ABC|molybdate ABC transporter, permease protein|equivalog|4.4e-08||Transport and binding proteins|Anions COG1176|PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism]. ; COG1176|PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism]. ; COG1176|PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism]. ATGCATCCGATCCCTTCCCCCGGCGCAGCCTTGCAGCGTCGCCAGGCCCTGCGCAGCTTCCTCGGCGTCACTCCGGCGCTGGTCGCCATCGGCCTGTTCCTGGTGTTGCCCATCCTCATCGTCGCCGCCTATTCGCTGATGGAGGCCAACCCCTATGGCGGGGTCGACCGGGCCTTCAGCGGCGAGGCGTACGTATCCCTGCTCTTCGAACGGCAGATGGACGACAGCCTGGCCTTCGCCGACTCCTACCTGACAATCGCCCTGCGCTCGCTCGGCATCGCCGCGCTGACCACCCTCATCACCCTGTCGCTCGGCTTCCCGGTGGCGGTCTGGCTGGCCATGCAGCCGCCGCGTCGGCGCGGCCTGCTGATCTTCCTGATCACCGTGCCGTTCTGGGCCAACCTGCTGATCCGCACCTACGCCTGGATTCTCCTGCTGCGCGGCAGCGGAGTGATCAACAACGGCCTGCTCGGCCTCGGCCTGGTCGACCACCCGTTGCCGCTGCTCTACAGCGACGGCGCGGTGCTGCTCGGCCTGGTCTACACCTACGCGCCCTTCGTGGTACTGCCGATCTACGCGACCCTGGAGAAAATGGACATGCGCCTGCTGGAAGCCGCCCAGGACCTCTACGCCGGCCGCCTGCGCACGCTACGCAAGGTGGTCCTGCCGACCGCCCGGCCGGGCATCCTGGCCGGCGCCATCCTGACCTTCGTGCCCTGCCTGGGCGCGATGATCGCCCCGGAACTGCTTGGCGGCGGCACCCGCATGATGCTTGGCAACCTGATTTTCCGGCAGTTCGCCGACGCCCGGAACTGGCCGTTCGGCGCCGCCCTGTCGCTGGTGCTGATGGCCGCGGTGATGCTGATCCTGACCGTCTACGCCTGGCGCGCCGAACGTCTCGCACGGGGGATGGGCCGATGA MHPIPSPGAALQRRQALRSFLGVTPALVAIGLFLVLPILIVAAYSLMEANPYGGVDRAFSGEAYVSLLFERQMDDSLAFADSYLTIALRSLGIAALTTLITLSLGFPVAVWLAMQPPRRRGLLIFLITVPFWANLLIRTYAWILLLRGSGVINNGLLGLGLVDHPLPLLYSDGAVLLGLVYTYAPFVVLPIYATLEKMDMRLLEAAQDLYAGRLRTLRKVVLPTARPGILAGAILTFVPCLGAMIAPELLGGGTRMMLGNLIFRQFADARNWPFGAALSLVLMAAVMLILTVYAWRAERLARGMGR Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0206 CDS 234875 235987 - probable ATP-binding component of ABC transporter Class 3 NP_248897.1 15595403 1 of 4 contiguous ORFs that look like a polyamine ABC-type transporter. 62% similar to ATP-binding component of spermidine/putrescine transport PotA [Escherichia coli] PS00211: ABC transporters family signature Transport of small molecules Cytoplasmic[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0015846|polyamine transport|IEA ; cellular_component|GO:0009898|internal side of plasma membrane|IEA ; cellular_component|GO:0055052|ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing|IEA ; molecular_function|GO:0005524|ATP binding|IEA ; molecular_function|GO:0015417|polyamine-transporting ATPase activity|IEA TIGR01187|potA|polyamine ABC transporter, ATP-binding protein|subfamily|9e-135||Transport and binding proteins|Amino acids, peptides and amines PF00005|ABC_tran, ABC transporter|46|226|5e-46 COG3842|PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]. ; COG3842|PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]. ; COG3842|PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]. ATGAGTGCCCTGCATTCGCTGCGTACCCATGCAGTGTCCATCCGCGCGGTACGCAAGGTGTACGGCGATCCCGAGAGCGGCCCGGTGGCACTGAAGCGCGTCGACCTGGATATCCGCGACAATGAGTTCTTCACCCTCCTCGGCCCGTCTGGCTGCGGCAAGACCACCCTGCTGCGGATGATCGCCGGCTTCGAGTTTCCCACGGAGGGCGAGATCCTCCTCTACGGCGAGAACATCGCCGCGCGACCGCCCTTCGAGCGCCCGGTGAACACCGTGTTCCAGCACTATGCGCTGTTCCCGCACATGAGCATCGCCGAGAACCTCGCCTTCGGCCTCGAATCGCGCCCACTGGGACGCAGCCTGGGCAAGGCGGAGATCGCCGAGCGGGTCCGCGAGATGCTCGCCCTGGTGCAGATGGAACGTTTCGCCGATCGCCGTCCCGGGCAGCTTTCAGGAGGCCAGCAGCAACGCGTGGCACTGGCCCGTGCGCTGGCGCCGCAACCGCGGGTGCTGCTGCTCGACGAACCGCTCTCGGCCCTCGACCTGAAGCTGCGCCAGGCGATGCGCGAGGAACTCAAGGCGATCCAAGCGAAGACCGGGATCACCTTCATTTTCGTCACCCACGACCAGGAGGAGGCGCTGACCATGTCCGATCGCATCGCCGTGCTCTCCGAGGGCCAGGTGCAACAGGTCGGACCGCCGGAAGAGATCTACGAGCGCCCCGGCAACCGCTTTGTCGCCGACTTCATTGGCGAGACCAATTTCATCGAAGCCGAGCTGCTCCAGCGCGACGGCCCGCTGGCGCTGTACCGCGGTCCCGGCGGTGAAGCGTTCGAGGCCGCCGCGCGCGACGGCCTGGCAGCCGGAGCCCGGGTCTGCCTGTCGATCCGCCCGGAACGCCTGGACCTGCTGGCGGCCAACACCGGCGGCGGCCTGCCCTGCACGGTGGAAAGCCAGGTCTACCTCGGCACCGACCTGCAATACCGGGTGCGCCTGGCCGACGGCAGCCTGCTGACGGTGCGCACACCGAACGGCACGGCACGGCGCTTCGCCACCGGTGAAGCTGCCTGCCTGGCCGTGGCCAAAGACAGCGCCAGCGTCCTGCTGGATTGA MSALHSLRTHAVSIRAVRKVYGDPESGPVALKRVDLDIRDNEFFTLLGPSGCGKTTLLRMIAGFEFPTEGEILLYGENIAARPPFERPVNTVFQHYALFPHMSIAENLAFGLESRPLGRSLGKAEIAERVREMLALVQMERFADRRPGQLSGGQQQRVALARALAPQPRVLLLDEPLSALDLKLRQAMREELKAIQAKTGITFIFVTHDQEEALTMSDRIAVLSEGQVQQVGPPEEIYERPGNRFVADFIGETNFIEAELLQRDGPLALYRGPGGEAFEAAARDGLAAGARVCLSIRPERLDLLAANTGGGLPCTVESQVYLGTDLQYRVRLADGSLLTVRTPNGTARRFATGEAACLAVAKDSASVLLD Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0207 CDS 236218 237111 + probable transcriptional regulator Class 3 NP_248898.1 15595404 51% similar to glycine cleavage activator protein GcvA [Escherichia coli] PS00044: Bacterial regulatory proteins, lysR family signature Transcriptional regulators Cytoplasmic[Class 2] ; Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] TIGR03418|chol_sulf_TF|putative choline sulfate-utilization transcription factor|hypoth_equivalog|2.4e-24||No Data|No Data PF03466|LysR_substrate, LysR substrate binding domain|94|288|2e-19 COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription]. ATGTCGATCCCCCGTTTGCCCCCGTTGAACGCTGTGCGCGCCTTCGAGGCCGCCGCCCGCCTGGGTAGCTACGTGGCGGCGGCGAAAGCCCTGCACGTAACCCAGCCGGCGGTCGGCCGGCATGTCCGGCTGCTGGAAGACTGGCTCGGCGCGCGTCTGTTCGAACGTACTTCGCGTGGCGTGCTGTTGACCCCGGCCGGGCGGCAGTACTACGCCGCGGTGTCCACCGCGTTGCAGCAGATCGCCGAGGCCGGCGGCCAGCTCAGTGGCGCGCGCTGGCTGCGGATCATGGCGGTGCCGGCGTTCTCCCGGCGCTGGCTGACGTCGCGCCTGGAAACCCTCTGCGCACAGCGGCCGGGGCTGAAGATCGCCCTCGAACCCAATCCCACCTTCGACCACGTGGAGGAGCGCAGCGCCGACCTCGGTATCGTCTATGGCCTGCCGGGCCAGTACGCCAACCCGCGCGCGCTGCTGATCCGGCCCAAGGTGTTCCCGGTGTGTTCGCCGGCCTACCTGGCCGCCGCCGGGCCGCTGGAGTCGGCGGAGCAACTGGTCGCGCACAAGCTCATCCATGTCGACGACGGCGAGTGGTGGAACCTCTGGTTCTCCGCCATCGGGGTCGACGTCGAGGTCCGTCCGGCGGTGCTCTACCTGAGCAACGACCATGCCCTGGCGCGGGCCGAGGAGGGTCTCGGCATCGCCCTGGCCAACGAGGTGCTGGTCCGCCAGGAACTGCGCAGCGGCGCTCTGGTGCGGCCCCTGGCCGCCGAGGCGGCACTGGAGTGCTACCAGGTGCTGACCCCGCCCGGCACGCCCTCGGCGGACGTCGAGTGGTTCATCGGCTGGCTGGGCGAGGCCCTGCGCGAAGAGTTTCCGGACGCCGTGACGTCCTGA MSIPRLPPLNAVRAFEAAARLGSYVAAAKALHVTQPAVGRHVRLLEDWLGARLFERTSRGVLLTPAGRQYYAAVSTALQQIAEAGGQLSGARWLRIMAVPAFSRRWLTSRLETLCAQRPGLKIALEPNPTFDHVEERSADLGIVYGLPGQYANPRALLIRPKVFPVCSPAYLAAAGPLESAEQLVAHKLIHVDDGEWWNLWFSAIGVDVEVRPAVLYLSNDHALARAEEGLGIALANEVLVRQELRSGALVRPLAAEAALECYQVLTPPGTPSADVEWFIGWLGEALREEFPDAVTS Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0208 CDS 237232 238896 + mdcA malonate decarboxylase alpha subunit Class 2 NP_248899.1 15595405 PMID:97352552 ; PMID:9208947 85% similar to malonate decarboxylase alpha subunit MdcA [Klebsiella pneumoniae] Carbon compound catabolism Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0006810|transport|IEA ; biological_process|GO:0015978|carbon utilization by utilization of organic compounds|ISS ; biological_process|GO:0044248|cellular catabolic process|ISS ; molecular_function|GO:0015451|decarboxylation-driven active transmembrane transporter activity|IEA TIGR01110|mdcA|malonate decarboxylase, alpha subunit|equivalog|0||Transport and binding proteins | Energy metabolism|Cations and iron carrying compounds | Other COG4670|COG4670, Acyl CoA:acetate/3-ketoacid CoA transferase [Lipid metabolism]. ; COG4670|COG4670, Acyl CoA:acetate/3-ketoacid CoA transferase [Lipid metabolism]. ; COG4670|COG4670, Acyl CoA:acetate/3-ketoacid CoA transferase [Lipid metabolism]. ATGACGACACCGATCTCTCCCCCGCCGCAGTGGTCGCGGCGCCGCCAGGAAAAGCAGCGGCGCCTCGAGCGCGTGCGCGGCCTGGCCGACGGCGCGGTGCTGCCGCGCGAAGGCCTGGTCGCCGCGCTGGAGGCGCTGATCGCGCCGGGCGATCGGGTGGTGCTGGAAGGCAACAACCAGAAGCAGGCGGATTTCCTCTCCCGTTCGCTGGCGCGGGTCGATCCCGGCAAGCTGCACGACCTGCACATGATCATGCCCAGCGTCGGCCGCCCGGAGCATCTCGACCTGTTCGAACTGGGCATCGCGCGCAAGCTCGACTTCTCCTTCTCCGGCCCGCAGAGCTTGCGCATCGGCCAGTTGCTCGAAGACGGCCTGCTGGAGATCGGCGCGATCCACACCTACATCGAGCTGTACGCGCGGCTGGTGGTCGACCTGATCCCCAACGTGGCGCTGGTCGCCGGTTTCGTCGCCGACCGCGAAGGCAACGTGTACACCGGGCCGAGCACGGAAGACACCCCGGCGCTGGTGGAGCCCACCGCGTTCAGCGACGGCATCGTCATCGTCCAGGTCAACCGTATCGTCGACGACCCGCGCGACCTGCCGCGAGTGGATATCCCGGCGTCCTGGGTGGACTTCGTGGTCGAGGCCGACCAGCCGTTCTACATCGAGCCGCTGTTCACCCGCGACCCGCGCCACATCAAGCCGGTCCACGTGCTGATGGCGATGATGGCGATCCGCGGCATCTACCAGCGGCACAACGTGCAGTCGCTGAACCACGGCATCGGCTTCAACACCGCGGCCATCGAGCTGATCCTGCCGACCTACGGCGAGTCCCTCGGCCTGAAGGGCAAGATCTGCCGACACTGGACCCTCAACCCGCACCCGACCCTTATCCCCGCCATCGAGAGCGGCTGGGTCGAGAGCGTGCACTGCTTCGGCACCGAGCTGGGCATGGAGGGCTACATCGCCCAGCGTCCCGACGTGTTCTTCACCGGTCGCGACGGCTCGCTGCGTTCCAATCGGATGTTCTGCCAACTGGCAGGACAATACGCCGTCGACCTGTTCATCGGCGCTACCCTCCAGGTCGACGGCGACGGCCATTCCTCCACCGTCACCCGCGGACGCCTGGCCGGTTTCGGCGGCGCCCCGAACATGGGCCACGACCCGCGCGGCCGGCGCCACTCGACGCCGGCCTGGCTGGACATGCGGGGCGAACCCGAGGCCTTGCTGGAGCGCGGCAGGAAGCTGGTGGTGCAGATGGTCGAGACCTTCCAGGACGGCGGCAAGCCGACCTTCGTCGAGCGCCTCGACGCGCTGGAGGTGGCGCGCCAGACCGGCATGCCGCTGGCGCCGGTGATGATCTATGGCGACGACGTCACCCATGTGCTCACCGAGGAAGGCATCGCCTACCTGTACAAGGCGCGCTCCCTGGAGGAACGTCAGGCGATGATCGCGGCGGTGGCGGGGATCAGTCCGATCGGCCTGCGCCACGATCCGCGCGAGACCCAGCGGATGCGCCGCGAAGGGCTGATCGCGCTGCCCGAGGACCTCGGCATCCGCCGCACCGACGCCTCGCGCGAGCTGCTGGCGGCGAAGAGCATCGCCGAGCTGGTCGAGTGGTCCGGCGGGCTGTACCAGCCGCCGGCGCGTTTCAGGAGCTGGTGA MTTPISPPPQWSRRRQEKQRRLERVRGLADGAVLPREGLVAALEALIAPGDRVVLEGNNQKQADFLSRSLARVDPGKLHDLHMIMPSVGRPEHLDLFELGIARKLDFSFSGPQSLRIGQLLEDGLLEIGAIHTYIELYARLVVDLIPNVALVAGFVADREGNVYTGPSTEDTPALVEPTAFSDGIVIVQVNRIVDDPRDLPRVDIPASWVDFVVEADQPFYIEPLFTRDPRHIKPVHVLMAMMAIRGIYQRHNVQSLNHGIGFNTAAIELILPTYGESLGLKGKICRHWTLNPHPTLIPAIESGWVESVHCFGTELGMEGYIAQRPDVFFTGRDGSLRSNRMFCQLAGQYAVDLFIGATLQVDGDGHSSTVTRGRLAGFGGAPNMGHDPRGRRHSTPAWLDMRGEPEALLERGRKLVVQMVETFQDGGKPTFVERLDALEVARQTGMPLAPVMIYGDDVTHVLTEEGIAYLYKARSLEERQAMIAAVAGISPIGLRHDPRETQRMRREGLIALPEDLGIRRTDASRELLAAKSIAELVEWSGGLYQPPARFRSW Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0209 CDS 238896 239777 + conserved hypothetical protein Class 4 NP_248900.1 15595406 mdcB PMID:97352552 ; PMID:9208947 65% similar to MdcB [Klebsiella pneumoniae] Putative enzymes Unknown[Class 3] ; Unknown[Class 3] biological_process|GO:0019361|2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process|IEA ; molecular_function|GO:0046917|triphosphoribosyl-dephospho-CoA synthase activity|IEA TIGR03132|malonate_mdcB|triphosphoribosyl-dephospho-CoA synthase MdcB|equivalog|1.5e-129|2.7.8.25|Biosynthesis of cofactors, prosthetic groups, and carriers|Other PF01874|CitG, ATP:dephospho-CoA triphosphoribosyl transferase|26|277|5e-48 COG1767|CitG, Triphosphoribosyl-dephospho-CoA synthetase [Coenzyme metabolism]. ; COG1767|CitG, Triphosphoribosyl-dephospho-CoA synthetase [Coenzyme metabolism]. ; COG1767|CitG, Triphosphoribosyl-dephospho-CoA synthetase [Coenzyme metabolism]. ATGAACGCCATCGCGAACCTCGCGGCGACGCCGGGCGCCGACCTCGGCGAATGCCTGGCCGACCTGGCGGTGGACGCCCTCATCGACGAAGCCGAACTGTCGCCCAAGCCGGCCCTGGTGGACCGCCGCGGCAATGGCGCGCATGCCGACCTGCACCTGGGCCTGATGCAGGCCTCGGCGCTGAGCCTGTGGCCGTGTTTCAAGGAAATGGCCGACGCCGCACAGCGGCATGGGCGCATCGATGCGCGCCTGCGCGGCGTCCTTGGCCAACTGGGGCGCGACGGCGAGGCGGCGATGCTGCGTACCACCGAAGGCGTGAACACCCATCGCGGAGCGATCTGGGCGCTCGGCCTGCTGGTCGCGGCCGCCGCTCTCGAACCGCGCCGCACGCAGGCCGGCGAAGTGGCCGCGCGCGCAGGACGCATCGCCCTGCTCGACGATCCGGCGGCCGCCATCGGCGACAGCCACGGCGAGCGCGTCCGTCGGCGCTACGGCGTCGGCGGCGCCCGCGAGGAGGCGCGTCTCTGCTTCCCCCGCGCAGTGCGCCACGGCCTGCCGCAGCTATGGCGCAGCCGCGAAGGCGGCGCTGGCGAGCAGAACGCCAGGCTCGATGCGCTGCTGGCGATCATGAGCGTCCTCGACGATACCTGCGTGCTGCACCGCGCCGGCCGCGTCGGCCTCGCCGCGATGCAGGATGGCGCCCGCGCGGTGCTCGCCGCCGGCGGCAGCGCCAGTCTCGCCGGGCGTCGCCGCCTGTGCGAGCTGGACCGCCGCCTGCTGGCGCTGAACGCTTCGCCCGGCGGCGCCGCCGACCTGCTGGCCGCCTGTCTTTTCCTCGATCGCCTGCCCGCCGTGTCCGGTGGGTGGGCTGGGAGTCTCTGA MNAIANLAATPGADLGECLADLAVDALIDEAELSPKPALVDRRGNGAHADLHLGLMQASALSLWPCFKEMADAAQRHGRIDARLRGVLGQLGRDGEAAMLRTTEGVNTHRGAIWALGLLVAAAALEPRRTQAGEVAARAGRIALLDDPAAAIGDSHGERVRRRYGVGGAREEARLCFPRAVRHGLPQLWRSREGGAGEQNARLDALLAIMSVLDDTCVLHRAGRVGLAAMQDGARAVLAAGGSASLAGRRRLCELDRRLLALNASPGGAADLLAACLFLDRLPAVSGGWAGSL Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0210 CDS 239779 240078 + mdcC malonate decarboxylase delta subunit Class 2 NP_248901.1 15595407 PMID:97352552 ; PMID:9208947 65% similar to malonate decarboxylase delta subunit MdcC [Klebsiella pneumoniae] Carbon compound catabolism Unknown[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0015978|carbon utilization by utilization of organic compounds|ISS ; biological_process|GO:0044248|cellular catabolic process|ISS ; molecular_function|GO:0000036|acyl carrier activity|RCA ; molecular_function|GO:0016831|carboxy-lyase activity|RCA TIGR03130|malonate_delta|malonate decarboxylase acyl carrier protein|equivalog|2.3e-60||No Data|No Data PF06857|MdcD, Malonate decarboxylase delta subunit (MdcD)|2|98|2e-37 COG3052|CitD, Citrate lyase, gamma subunit [Energy production and conversion]. ; COG3052|CitD, Citrate lyase, gamma subunit [Energy production and conversion]. ; COG3052|CitD, Citrate lyase, gamma subunit [Energy production and conversion]. ATGGAAACCCTGACCTTCGAATTTCCCGCCGGCGCTCCGGCGCGCGGTCGCGCCCTGGCCGGCTGTGTCGGCTCCGGCGACCTGGAGGTGCTGCTCGAGCCGGCCGCCGGAGGCGCGCTGAGCATCCAGGTGGTGACCTCGGTAAACGGCAGCGGCCCGCGCTGGCAACAACTCTTCGCGCGGGTCTTCGCGGCGTCCACGGCGCCGGCCGCGTCGATCCGCATCCACGATTTCGGCGCCACTCCCGGGGTGGTCCGCCTGCGCCTGGAGCAGGCACTGGAGGAGGCTGGCCATGACTGA METLTFEFPAGAPARGRALAGCVGSGDLEVLLEPAAGGALSIQVVTSVNGSGPRWQQLFARVFAASTAPAASIRIHDFGATPGVVRLRLEQALEEAGHD Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0211 CDS 240071 240934 + mdcD malonate decarboxylase beta subunit Class 2 NP_248902.1 15595408 PMID:97352552 ; PMID:9208947 83% similar to malonate decarboxylase beta subunit MdcD [Klebsiella pneumoniae] Carbon compound catabolism Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0015978|carbon utilization by utilization of organic compounds|ISS ; biological_process|GO:0044248|cellular catabolic process|ISS ; molecular_function|GO:0016831|carboxy-lyase activity|RCA TIGR03133|malonate_beta|malonate decarboxylase, beta subunit|equivalog|1.1e-182|4.1.-.-|No Data|No Data PF01039|Carboxyl_trans, Carboxyl transferase domain|15|248|1e-13 COG0777|AccD, Acetyl-CoA carboxylase beta subunit [Lipid metabolism]. ; COG0777|AccD, Acetyl-CoA carboxylase beta subunit [Lipid metabolism]. ; COG0777|AccD, Acetyl-CoA carboxylase beta subunit [Lipid metabolism]. ATGACTGACGTCGCCCGCCTGCTGGCGCTGCGCAGCTTCACCGAACTGGGAGCGCGCCAACGCGCCCGTGCCCTGCTTGACGCGGGCAGCTTCCGCGAGTTGCTCGATCCCTTCGCCGGCGTGCAGTCGCCCTGGCTGGAACGACAGGGCATCGTGCCCCAGGCCGACGATGGGGTAGTGGTCGCCCGTGGCCTCCTCGACGGCCAGCCGGCGGTGCTCGCCGCCATCGAAGGTGCTTTCCAGGGCGGCAGCCTTGGCGAAGTCAGCGGAGCGAAGATCGCCGGCGCGCTGGAGCTGGCCGCCGAGGACAATCGCAACGGCGTTCCGACCCGGGCCCTGCTGTTGCTGGAAACCGGTGGCGTGCGCCTGCAGGAAGCCAACCTCGGACTGGCGGCGATCGCCGAGATCCAGGCGGCCATCGTCGATCTGCAGCGCTACCAGCCGGTGGTGGCGGTGATTGCCGGGCCGGTCGGCTGCTTCGGCGGCATGTCCATCGCCGCCGGGCTGTGCAGCTACGTGCTGGTGACCCGCGAGGCGCGCCTCGGCTTGAACGGTCCGCAGGTGATCGAACAGGAGGCCGGCATCGCTGAATACGACTCGCGCGACCGGCCGTTCATCTGGAGCCTCACCGGCGGCGAGCAGCGCTTCGCCAGCGGTCTCGCCGACGCCTACCTGGCCGACGACCTCGATGAGGTACGCACCTCGGTACTCGCGTATTTCGCCAAGGGCCTGCCGGCACGGCCGCGCTGCCGCCGCGCCGAGGATTACCTGCGGCGGCTGGGCGACCTCGATACCGCCGAGCAACCGGATGCCGCCGGCGTGCGCCGGCTGTACCAGGGGCTGGGCCAAGGAGATGCAACATGA MTDVARLLALRSFTELGARQRARALLDAGSFRELLDPFAGVQSPWLERQGIVPQADDGVVVARGLLDGQPAVLAAIEGAFQGGSLGEVSGAKIAGALELAAEDNRNGVPTRALLLLETGGVRLQEANLGLAAIAEIQAAIVDLQRYQPVVAVIAGPVGCFGGMSIAAGLCSYVLVTREARLGLNGPQVIEQEAGIAEYDSRDRPFIWSLTGGEQRFASGLADAYLADDLDEVRTSVLAYFAKGLPARPRCRRAEDYLRRLGDLDTAEQPDAAGVRRLYQGLGQGDAT Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0212 CDS 240931 241737 + mdcE malonate decarboxylase gamma subunit Class 2 NP_248903.1 15595409 PMID:97352552 ; PMID:9208947 70% similar to malonate decarboxylase gamma subunit MdcE [Klebsiella pneumoniae] Carbon compound catabolism Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0015978|carbon utilization by utilization of organic compounds|ISS ; biological_process|GO:0044248|cellular catabolic process|ISS ; molecular_function|GO:0016831|carboxy-lyase activity|RCA TIGR03134|malonate_gamma|malonate decarboxylase, gamma subunit|equivalog|9.8e-145|4.1.-.-|No Data|No Data PF06833|MdcE, Malonate decarboxylase gamma subunit (MdcE)|11|268|7e-76 ATGAGCCAACCGTTCGCTTCCCGTGGCCTGGCCTGGTTCCAGGCGCTGGCCGGTAGCCTCGCGCCGCGTCCCGGCGATCCTGCTTCGTTGCGCGTCGCCGATGCCGAGCTGGACGGCTACCCGGTGCGTTTCCTGGCCGTCGTGCCCGATCCCGACAATCCGTTCCCGCGCGCTCGCCAGGGCGAGGTCGGGCTGCTCGAGGGCTGGGGCCTGGCCGCCGCCGTCGACGAGGCGCTGGAGGCCGACCGCGAGGCGCCACGCAAGCGCGCGCTGCTGGCCATCGTCGACGTGCCGAGCCAGGCCTACGGCCGCCGCGAGGAGGCCCTGGGTATCCACCAGGCGCTGGCCGGGGCGGTGGATGCCTACGCCCGCGCCCGACTCGCCGGGCATCCGCTGATCGGCCTGCTGGTGGGCAAGGCGATGTCCGGCGCGTTCCTCGCCCACGGCTACCAGGCCAACCGCCTGATCGCTTTGCACGATCCGGGGGTGATGGTCCACGCCATGGGCAAGGCCGCCGCCGCGCGGATCACCCTGCGCAGCGTCGAGGAACTGGAGGCGTTGGCGGCGAAGGTGCCGCCGATGGCCTACGACATCGACAGCTACGCGTCGCTCGGCCTGCTCTGGAGGACCCTTCCGGTGGAGACCGTCGAGGTGCCGTCGACGGCGGACCTGGTGCGGGTCCGCACCTGCCTGGGCGAGGCCCTGGCCGATATCCTCGGCGGCCCGCGCGACCTCGGCGGCCGCCTCGGCGCGGCCAACCGCGAGGCGTCGGCGCGGGTGCGCCGGCTGCTGCGCGAGCAGTGGTGA MSQPFASRGLAWFQALAGSLAPRPGDPASLRVADAELDGYPVRFLAVVPDPDNPFPRARQGEVGLLEGWGLAAAVDEALEADREAPRKRALLAIVDVPSQAYGRREEALGIHQALAGAVDAYARARLAGHPLIGLLVGKAMSGAFLAHGYQANRLIALHDPGVMVHAMGKAAAARITLRSVEELEALAAKVPPMAYDIDSYASLGLLWRTLPVETVEVPSTADLVRVRTCLGEALADILGGPRDLGGRLGAANREASARVRRLLREQW Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0213 CDS 241753 242445 + hypothetical protein Class 4 NP_248904.1 15595410 mdcG 51% similar to putative malonate decarboxylase component MdcG [Klebsiella pneumoniae] Carbon compound catabolism Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0051191|prosthetic group biosynthetic process|IEA ; molecular_function|GO:0050519|holo-citrate lyase synthase activity|IEA TIGR03135|malonate_mdcG|holo-ACP synthase, malonate decarboxylase-specific|equivalog|2.7e-91|2.7.7.61|Energy metabolism|Other PF10620|MdcG, Phosphoribosyl-dephospho-CoA transferase MdcG|127|222|2e-26 GTGGTCATCGCGAACAGCTCACAGCGGGGCTCCAGCCGGCGACGGCTCGCTCCTGATCCGATGCGTCGCAGGGCAGGGCCGGAACCCCATGACTTGCTCCTGGGCATGGCGCCGGCGCATTTGCCGGAGAATGCTCCGGCCTGGGTCTGCGCGGCACTGAAGGCCGGCTGGCCGGTGGTGGTGCGCCGTGCGCCGGCAGATCCCGCGCGGGTGGCCATCGGCGTGCGCGGCCTGGCGCGGGAGCAGCGCTGGGCCGGCTGGATGCCGTTGGCGGCAATCACCCGGCGCTTGCGCCCGGAAGCGCTGGGCCAGCGCGAGCCGGCGATGCTGCGCGATCTGCCGGCCTGGCGTGCCTTGCGCGACCTGCGTGCGCCGCTGAACGCGCTGGGACTGGCCTGGGGCGTGACCGGCGGCGCCGGTTTCGAGCTGGCCAGCGGGGTCGCCGTGCTGCATCCGGACAGCGACCTCGACCTGCTGCTGCGCACCCCGCGCCCGTTCCCGCGCGATGACGCGCTGCGCCTGCTGCAGTGCTTCGAGCAGTGTCCCTGCCGGATCGACCTGCAACTGCAGACCCCGGCGGGCGGCGTGGCCCTGCGCGAATGGGCCGAGGGTCGGCCCCGGGTGCTGGCGAAAGGCAGCGAGGCGCCGCTGTTGCTGGAAGACCCCTGGCGGATCGCGGAGGTCGAGGCATGA MVIANSSQRGSSRRRLAPDPMRRRAGPEPHDLLLGMAPAHLPENAPAWVCAALKAGWPVVVRRAPADPARVAIGVRGLAREQRWAGWMPLAAITRRLRPEALGQREPAMLRDLPAWRALRDLRAPLNALGLAWGVTGGAGFELASGVAVLHPDSDLDLLLRTPRPFPRDDALRLLQCFEQCPCRIDLQLQTPAGGVALREWAEGRPRVLAKGSEAPLLLEDPWRIAEVEA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0214 CDS 242442 243374 + probable acyl transferase Class 3 NP_248905.1 15595411 mdcH PMID:97352552 ; PMID:9208947 73% similar to putative malonate decarboxylase transacylase component MdcH [Klebsiella pneumoniae] PF00698: Acyl transferase domain Carbon compound catabolism Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] TIGR03131|malonate_mdcH|malonate decarboxylase, epsilon subunit|equivalog|1.6e-165||No Data|No Data PF00698|Acyl_transf_1, Acyl transferase domain|5|277|2e-30 COG0331|FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]. ; COG0331|FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]. ; COG0331|FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]. ATGAGCGTGCTGTTCGCCTATCCCGGCCAGGGCGCCCAACGTCCCGGCATGCTCGCGGCCTTGCCCGACGAACCGCCGGTGCGCGCCTGCCTGGAGCAGGCGGCGGACTGTCTCGGCCAGGCGCCGGCCGAACTGGAGAGCGCCGAGGCCTTGCGCGGCACCCGCGCGGTGCAGTTGTGCCTGCTGATCGCCGGGGTCGCCGCCAGCCGCCTGCTGGAGACGCGCGGGCATCGGCCGGGGCTGGTCGCCGGGCTGTCCATCGGCGCCTATCCGGCGGCGGTGGTAGCCGGCGCGCTGGACTTCGACGACGCGCTGCGTCTGGTGGCGCTGCGTGGCGAACTGATGCAGGCCGCCTGGCCCGAGGGCTACGGGATGAGCGCCATCCTCGGTCTCGAACAGGCGCAACTGGAAGCGCTGATCCTGGCGGTGCGGCGCGAGCACCCGCCGCTCTACCTGGCCAACGTCAACGCCGAGCGGCAACTGGTGGTGGCCGGCAGCGAAGCGGCTCTGGCCGCCCTCGCCGAACGCGCCCGTGCCGCCGGCGCCAGCGCGGCGAAGCGCCTGGCGGTGAGCGTACCGTCGCACTGTGCGCTGCTCGACGAACCGGCCGCGCGCCTGGCCGAAGCCTTCGCCGGCATCCGCCTGCATCGGCCGCGCGTGCCCTACCTGAGCAGCAGCCGGGCGCGCCTGGTCGCCGAACCGGCCGCGCTGGCCGACGATCTCGCCGGCAACATGGCGCGCCGCGTCGAGTGGCTGGCGACATTGCGCAGCGCCTACGAGCGCGGTGCCCGCCTGCATCTCGAGCTGCCGCCGGGACGGGTCCTCAGCGGTCTGGCGCGGCCTCTGTTCGGCTGCGCCACGCCGGCCTTCGAAGGCTCCCGGGCGGATACCCTGGACGCGCTGTTGCGCGAGGAGGAAAAGAGAACCCGATAA MSVLFAYPGQGAQRPGMLAALPDEPPVRACLEQAADCLGQAPAELESAEALRGTRAVQLCLLIAGVAASRLLETRGHRPGLVAGLSIGAYPAAVVAGALDFDDALRLVALRGELMQAAWPEGYGMSAILGLEQAQLEALILAVRREHPPLYLANVNAERQLVVAGSEAALAALAERARAAGASAAKRLAVSVPSHCALLDEPAARLAEAFAGIRLHRPRVPYLSSSRARLVAEPAALADDLAGNMARRVEWLATLRSAYERGARLHLELPPGRVLSGLARPLFGCATPAFEGSRADTLDALLREEEKRTR Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0215 CDS 243431 243835 + malonate transporter MadL Class 2 NP_248906.1 15595412 madL BIOLOG data shows growth on malonate. Annotation assigns PA0215 and PA0216 as having 71% and 81% homology with MadL and MadM from Malonomonas rubra. PMID:97274645 ; PMID:15687295 ; PMID:9128730 ; PMID:9573154 71% similar to putative malonate transporter MadL [Malonomonas rubra] 3 predicted transmembrane helices ; 4 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Membrane proteins ; Transport of small molecules Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0015849|organic acid transport|IEA ; molecular_function|GO:0005342|organic acid transmembrane transporter activity|IEA TIGR00807|malonate_madL|malonate transporter, MadL subunit|equivalog|1.4e-55||Transport and binding proteins|Carbohydrates, organic alcohols, and acids PF03817|MadL, Malonate transporter MadL subunit|1|125|2e-43 ATGATTATCTACGGTGTCGCACTGCTGTCTCTGTGTACCCTCGCCGGGCTGTTCATCGGCGAGATCCTTGGCGTGCTGCTCGGCGTGCCGGCCAACGTCGGTGGCGTCGGCATCGCCATGCTGCTGCTGATCTTCGTCGGCAGCTACCTGGGCAAGCGTGGCCTGCTCTCGGCGAAGACCGAGCAGGGCGTGGAGTTCTGGAGCGCGGTCTACATTCCCATCGTGGTCGCCATGGCCGCCCAGCAGAATGTCCTCGGCGCGCTGAGCGGCGGGCCGGCCGCTATCCTCGCCGGCATCGCCGCGGTCGCCGTGGCCTTCGCCCTGGTCCCGCTGCTCGACCGCTTCGGCCGGAAGAAAGCCGAAGGCGCCCGGCCATTGAAACCGCGCACCAGCGTGCAGGGGTGA MIIYGVALLSLCTLAGLFIGEILGVLLGVPANVGGVGIAMLLLIFVGSYLGKRGLLSAKTEQGVEFWSAVYIPIVVAMAAQQNVLGALSGGPAAILAGIAAVAVAFALVPLLDRFGRKKAEGARPLKPRTSVQG Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0216 CDS 243841 244605 + malonate transporter MadM Class 2 NP_248907.1 15595413 madM BIOLOG data shows growth on malonate. Annotation assigns PA0215 and PA0216 as having 71% and 81% homology with MadL and MadM from Malonomonas rubra. PMID:97274645 ; PMID:15687295 ; PMID:9128730 ; PMID:9573154 81% similar to putative malonate transporter MadM [Malonomonas rubra] 8 predicted transmembrane helices ; 8 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Membrane proteins ; Transport of small molecules Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0015849|organic acid transport|IEA ; molecular_function|GO:0005342|organic acid transmembrane transporter activity|IEA TIGR00808|malonate_madM|malonate transporter, MadM subunit|equivalog|1.7e-131||Transport and binding proteins|Carbohydrates, organic alcohols, and acids PF03818|MadM, Malonate/sodium symporter MadM subunit|2|61|8e-18 ATGTTCGAGTCCCTGAACAAAGTCATCAATGGCTACGGCCTGATCAGCGGCTTCGCCATCATCGGCGTGACCATGGCGGTGTCCTACTGGTTGTCGGCGCGCCTCACCCGCGGGCGCCTGCACGGCTCGGCGATCGCGATCTTCCTCGGCCTGGTGCTGTCCTACGTCGGCGGCGTCGCCACCGGCGGGCAGAAAGGATTGGTGGACGTGCCCCTGATGTCCGGTATCGGCCTGCTGGGTGGCGCCATGCTGCGCGACTTCGCCATCGTCGCCACGGCCTTCGGGGTGAATGTCGAGGAACTGCGTCGGGCAGGGGTTTCCGGGGTGGTGTCGCTGTTCCTCGGGGTCGGTTCGTCGTTCGTCGCCGGGGTCGCGGTGGCCATGGCGTTCGGCTACACCGATGCGGTCAGCCTGACCACCATCGGCGCCGGCGCGGTCACCTACATCGTCGGACCGGTGACCGGCGCCGCCCTGGGGGCCAGCTCCGAGGTGATGGCGCTGAGCATCGCCGCCGGGCTGGTGAAGGCGATCCTGGTGATGGTCCTGACGCCTTTCGTCGCGCCCTACATCGGCCTGAACAATCCACGTACGGCGGTGATCTTCGGTGGTCTCATGGGCACCTCCAGTGGCGTCGCCGGCGGCCTCGCCGCCACCGACCCGAAGCTGGTGCCCTACGGTTGCCTGACCGCGGCGTTCTATACCGCCATCGGTTGTCTGCTGGGGCCGTCGCTGCTGTATTTCAGCGTGCGCGGCCTGGTTGGGTGA MFESLNKVINGYGLISGFAIIGVTMAVSYWLSARLTRGRLHGSAIAIFLGLVLSYVGGVATGGQKGLVDVPLMSGIGLLGGAMLRDFAIVATAFGVNVEELRRAGVSGVVSLFLGVGSSFVAGVAVAMAFGYTDAVSLTTIGAGAVTYIVGPVTGAALGASSEVMALSIAAGLVKAILVMVLTPFVAPYIGLNNPRTAVIFGGLMGTSSGVAGGLAATDPKLVPYGCLTAAFYTAIGCLLGPSLLYFSVRGLVG Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0217 CDS 244690 245619 - probable transcriptional regulator Class 3 NP_248908.1 15595414 mdcR PMID:97352552 ; PMID:9208947 65% similar to malonate decarboxylase operon regulator MdcR [Klebsiella pneumoniae] PS00044: Bacterial regulatory proteins, lysR family signature Transcriptional regulators Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] TIGR03339|phn_lysR|aminoethylphosphonate catabolism associated LysR family transcriptional regulator|subfamily|5.2e-07||No Data|No Data PF03466|LysR_substrate, LysR substrate binding domain|96|297|7e-27 COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription]. ATGCTGATCGACGAAGAAATCACCCTCAAGAAGCTGGAAACCTTCCTCGCCTTCATGCGCACCGGCAACCTGGCGCGCGCGGCGGCGGAACTGGGCACCAGCAACGTCAGCGTGCACCGCGCCATCCACTCGCTGGAAAGCGCCCTGCGCTGCCCGCTGTTCAAGCACGAGGGACGCAACCTGACCCCGCTGGAAAGCGCCTACGTGCTCGAGGAGCGCGCGCAGAAGCTGGTCCAGGAGGTACTCGACACGGTGCGCCTGACCCGCGAGGCGGCCGGCTTCTCCGCCGAGCGCTTCAAGCTCGGCGCGCTCTATTCGCTGACGGTGAAGACCGTGCCGCAACTGATCATGGGCCTCAAGCTGCGACGCAGCGCGCTGAATATCGACCTGATCCTCGGCTCCAACGTCGACCTGTTCTACCAGCTGAAGAACATGGAGCTGGACGCCATCCTGGTGTCGCTCAACGACAGCGTCAGCGATCCCGACTGCGAGCACCTGCCGCTGTTCTCCGATGACATCTTCCTCGCCGTGCCGGTGGACTCGCCCTACGCCAGGCTCGCCGAGATCGATCTCAGCACCCTGCGCGACACGCCCTTCGTCACGCTCACCCAGGGCTTCGCCACCCATCAGGACGGCACCCGGGTGTTCCAGCAGGCCGGCTTCGAACCGCAGATCGCGATGCAGGTGAACGACATCTTCACCCTCCTCAGCATGGTCAGCTCGGGGGTCGGCCATGCGCTGCTGCCCAAACGCATCGAGGCGGTCTACGAGAACCGCGTGCGGCTGATCCCGCTGCAACCGCGCTATCGCCTGCAGCAGCACATCGGCGTGGTGTTCCTCAAGGCCAAGGAGCGCGACCCGAACCTGCTGGCGTTGCTCGCGGAGTGCCGGATGTACAGCCTGCGCCTGGAGCAGGAGGCGGCGGGATAG MLIDEEITLKKLETFLAFMRTGNLARAAAELGTSNVSVHRAIHSLESALRCPLFKHEGRNLTPLESAYVLEERAQKLVQEVLDTVRLTREAAGFSAERFKLGALYSLTVKTVPQLIMGLKLRRSALNIDLILGSNVDLFYQLKNMELDAILVSLNDSVSDPDCEHLPLFSDDIFLAVPVDSPYARLAEIDLSTLRDTPFVTLTQGFATHQDGTRVFQQAGFEPQIAMQVNDIFTLLSMVSSGVGHALLPKRIEAVYENRVRLIPLQPRYRLQQHIGVVFLKAKERDPNLLALLAECRMYSLRLEQEAAG Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0218 CDS 245948 246868 - probable transcriptional regulator Class 3 NP_248909.1 15595415 49% similar to putative transcriptional regulator YvbU [Bacillus subtilis] PS00044: Bacterial regulatory proteins, lysR family signature Transcriptional regulators Cytoplasmic[Class 2] ; Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] TIGR03339|phn_lysR|aminoethylphosphonate catabolism associated LysR family transcriptional regulator|subfamily|7.5e-13||No Data|No Data PF00126|HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family|6|65|7e-16 COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription]. ; COG0583|LysR, Transcriptional regulator [Transcription]. GTGGCGTCCTATACCTTGCGGCAACTCAAGTATTTCGTGACCACCGTGGAATGCGGCAGCGTGGCCGAGGCCTCGCGCAAGCTGTACATCGCCCAGCCGTCGATCTCCACGGCGGTGAAGGGTCTGGAGGAAAGCTTCGGCGTGCAGCTGTTCATCCGCCACCACGCCCAGGGCGTGTCGCTGACCCCCGCCGGCGCGCGCTTCTACCGCAAGGCCCAGGAACTGCTGCGGATGGCCCACGAGTTCGAGCAGAACGCCCTGGCCGACAACGACGTGATCGCCGGGCAGATCGACATCGGCTGCTTCGAGACGGTCGCCCCGCTCTACCTGCCAGGCCTGATCGCCGGCTTTCGCCAGGCCTATCCGGGGGTGGAGATCCGCATACGCGACGGAGAGCAGCAGGAACTGGTGCAAGGCCTCACCTCCGGGCGCTTCGACCTGGCCTTCCTCTACGAGCACGACCTCGACTCGACCATCGAGACCGAGCCGCTGATGCCGCCGCAACGACCCCACGCGCTGCTCCCCGAAGGGCACCGCTTCGCCGGGCAGGCGCAAGTGTCGCTGCGCGACCTGTGCCTGGAACCGATGATCCTGCTCGACGTGCAGCCCAGCCGCACCTATTTCGTCAGCCTGTTCGAGGAACTCGGCCTGACGCCGAACATCGCCTTCAGCTCGCCGTCCATCGAGATGGTGCGCGGCATGGTCGGCCAGGGCTTCGGCTTCTCCCTGCTGGTCACCCGCCCGCATTCGGAATGCACCTACGACGGCAAGAAGGTGGTCATGGTCGACCTCGCCGAGCCGGTGTCCACCTCCGGGCTCGCCGCCGCCTGGCTGAAACGCGCGCAACTGACCAAGCCGGCACGATTGTTCGTCGACTACTGCCGGGAGCAACTGGGCAAGCTTGCCGAGCGCCGGCACTGA MASYTLRQLKYFVTTVECGSVAEASRKLYIAQPSISTAVKGLEESFGVQLFIRHHAQGVSLTPAGARFYRKAQELLRMAHEFEQNALADNDVIAGQIDIGCFETVAPLYLPGLIAGFRQAYPGVEIRIRDGEQQELVQGLTSGRFDLAFLYEHDLDSTIETEPLMPPQRPHALLPEGHRFAGQAQVSLRDLCLEPMILLDVQPSRTYFVSLFEELGLTPNIAFSSPSIEMVRGMVGQGFGFSLLVTRPHSECTYDGKKVVMVDLAEPVSTSGLAAAWLKRAQLTKPARLFVDYCREQLGKLAERRH Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0219 CDS 247219 248709 + probable aldehyde dehydrogenase Class 3 NP_248910.1 15595416 PMID:91216440 ; PMID:1840553 68% similar to aldehyde dehydrogenase AldH [Escherichia coli] PS00687: Aldehyde dehydrogenases glutamic acid active site Putative enzymes Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0006578|betaine biosynthetic process|IEA ; molecular_function|GO:0008802|betaine-aldehyde dehydrogenase activity|IEA TIGR01804|BADH|betaine aldehyde dehydrogenase|equivalog|4e-171|1.2.1.8|Cellular processes|Adaptations to atypical conditions PF00171|Aldedh, Aldehyde dehydrogenase family|29|490|1e-175 COG1012|PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion]. ; COG1012|PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion]. ; COG1012|PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion]. GTGTTCGAACTCAGCGATTGGCAACGGCGCGCCGCGACACAGCGCTTCATCGACCAGGCCCTGATCGGCGGCCGCCAGCGTCCAGCCGCCAGCGGCGCTACCTTCGACGCCATCGATCCGGCGAGCAATCGCCTGCTGGCGCGGGTCGCGGCCTGCGATGCGGCCGACGTCGACGCGGCAGTGGCCGCCGCCCGCCGCGCCTTCGACGAAGGCCCCTGGGCGCGTCTCGCCCCGGTCGAGCGCAAGCGCGTGCTGCTGCGCCTGGCCGAGCTGATGCTGGCCCATCGCGAAGAGCTGGCGCTGCTCGACTCGCTGAACATGGGCAAGCCGGTGATGGACGCCTGGAACATCGATGTACCCGGCGCCGCCCACGTCTTCGCCTGGTATGCGGAAAGCCTCGACAAGCTCTACGACCAGGTCGCGCCGACCGCCCAGCAGACCCTGGCCACCATTACCCGCGTGCCGCTGGGGGTGATCGGCGCGGTGGTGCCGTGGAACTTCCCGCTCGACATGGCCGCCTGGAAGCTCGCCCCGGCCCTGGCCGCCGGCAACTCGGTGGTGCTCAAGCCGGCCGAGCAGTCGCCGTTCTCCGCCCTGCGCCTGGCCGAGCTGGCCCTGGAGGCGGGGGTGCCGGAAGGCGTGCTGAACGTGGTGCCGGGCCTCGGCGAGCAGGCCGGCAAGGCCCTCGGCTTGCACCCGGAGGTGGACGCACTGGTGTTCACCGGCTCCACCGAGGTCGGCAAGTACTTCATGCAGTATTCCGCGCAATCCAACCTCAAGCAGGTCTGGCTGGAGTGCGGCGGCAAGAGTCCGAACCTGGTGTTCGCCGATTGCCGCGATCTTGACCTGGCGGCGGAAAAGGCCGCCTTCGGCATTTTCTTCAACCAGGGCGAGGTCTGTTCGGCGAACTCGCGCTTGCTGGTGGAGCGTTCGATCCACGACGAGTTCGTCGAGCGCCTGCTGGCCAAGGCCCGCGACTGGCAGCCGGGCGATCCGCTGGACCCGGCCAGCCGCGCCGGCGCCATCGTCGACCGCCGGCAGACCGCCGGGATTCTCGCCGCCATCGAGCGGGCGCAAGGCGAGGGCGCGACCCTGCTCGGCGGTGGCCGCCAGTTGACGATCAACGGTTCGGACAACTTCATCGAACCGACCCTGTTCGGCGACGTACGCCCGGACATGCAGCTGGCCCGCGAGGAAATCTTCGGTCCGGTGCTGGCGATCAGCGCCTTCGACTCCGAGGACGAGGCCATACGCCTGGCCAACGACAGCCGCTACGGCCTCGCCGCCTCGCTGTGGAGCGACGACCTGCACCGTGCACACCGGGTGGCGCGGCGCTTGAATGCCGGAACGGTGTCGGTGAATACCGTGGACGCGCTGGACGTCGCGGTGCCTTTCGGCGGCGGCAAGCAGTCCGGCTTCGGTCGCGACCTGTCGCTGCATTCCTTCGACAAGTACACCCAGTTGAAGACGACCTGGTTCCAGTTGCGCTGA MFELSDWQRRAATQRFIDQALIGGRQRPAASGATFDAIDPASNRLLARVAACDAADVDAAVAAARRAFDEGPWARLAPVERKRVLLRLAELMLAHREELALLDSLNMGKPVMDAWNIDVPGAAHVFAWYAESLDKLYDQVAPTAQQTLATITRVPLGVIGAVVPWNFPLDMAAWKLAPALAAGNSVVLKPAEQSPFSALRLAELALEAGVPEGVLNVVPGLGEQAGKALGLHPEVDALVFTGSTEVGKYFMQYSAQSNLKQVWLECGGKSPNLVFADCRDLDLAAEKAAFGIFFNQGEVCSANSRLLVERSIHDEFVERLLAKARDWQPGDPLDPASRAGAIVDRRQTAGILAAIERAQGEGATLLGGGRQLTINGSDNFIEPTLFGDVRPDMQLAREEIFGPVLAISAFDSEDEAIRLANDSRYGLAASLWSDDLHRAHRVARRLNAGTVSVNTVDALDVAVPFGGGKQSGFGRDLSLHSFDKYTQLKTTWFQLR Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0220 CDS 248767 250200 + amino acid APC family transporter Class 1 NP_248911.1 15595417 PMID:15687295 ; PMID:18833300 43% similar to phenylalanine-specific transport system permease PheP[Escherichia coli] PS00218: Amino acid permeases signature ; 12 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius Transport of small molecules Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] TIGR00909|2A0306|amino acid transporter|subfamily|8.2e-11||Transport and binding proteins|Amino acids, peptides and amines PF00324|AA_permease, Amino acid permease|25|406|2e-18 COG0531|PotE, Amino acid transporters [Amino acid transport and metabolism]. ; COG0531|PotE, Amino acid transporters [Amino acid transport and metabolism]. ; COG0531|PotE, Amino acid transporters [Amino acid transport and metabolism]. ATGAACGACACGCCGAACGTGCGTGAGCCGGCCCTGCGCCGCGTGCTCGGGCTGGGACCGCTGCTGGCGGTGGCCATCGGCCTGGTGGTTTCCCAGGGCGTGATGGTACTGATGCTGCAAGGCGCCGGGACGGCCGGCCTCGGCTTCATCGTGCCGCTGGGAGTGGCCTACCTGCTGGCGCTGAGCTACGCCTTTTCCTTTTCCGAGCTGGCCCTGATGATTCCCCGCGCCGGTAGCCTGAGCAGCTACACCGAGGTGGCCATCGGGCATTTCCCGGCGATCCTGGCGACCTTTTCCGGCTACGTGGTGGTGGCGATGTTCGCCCTCTCGGCGGAACTGCTGCTGCTCGACCTGATCATCGGCAAGGTCTACCCCGGCGCGCTGCCGCCGATGCTGGTGGCCTACGGCGTGCTCGGCCTGTTCACCCTGCTCAACCTGCTCGGCATCGACATCTTCGCGCGCCTGCAGAGCGCGCTGGCGCTGCTGATGATGATCGTCCTGCTGGTGCTCGGCCTGGGTGCGGTGAGCAGCGACCACGCTTCCGCGCAGACCGCCCTGGCGAGCGGCTGGAACCCGCTCGGGGTAAGCGCCCTGGCGCTCACCGCGATGGCCGTGTGGGGCTTCGTCGGCGCCGAGTTCGTCTGCCCGCTGGTGGAGGAGACGCGGCGTCCGGAGCGCAACATCCCGCGTTCGATGATCCTCGGCCTGAGCATCATCTTCCTGACCATCGCCCTCTACTGCTTCGGTGCGCTGCTGTGCATCCCGCAGGCGGAACTGGCCGGCGACCCGCTGCCACACTTCCTCTTCGCCAACCGCGTGTTCGGCGAGTACGGCCAGCTGTTCCTGGTGATCGCCGCGATCACCGCCACCTGCAGCACCCTCAACTCGTCGCTGGCGGCGATCCCGCGGATGCTCTACGGGATGGCGCAGAACGGCCAGGCCTTCCCGCAATTCAAGCAGCTCAGCCGGCGGGCGCGCACGCCCTGGGTGGCGGTGCTGTTCGTCGCCGCGATCACCGGCCTGCCGATCCTGATCCTCGGCCAGGACCCGGACTCGATCAACCTGCTGCTGCTCGCCGCCGCGCTGGCCTGGCTGCTGGCCTACATCATCGCCCACGTCGACGTGCTGGCCCTGCGCCGTCGCTATCCGCACATCGCCCGTCCGTTCCGCACGCCGTTCTACCCGCTGCCGCAACTGTTCGGCATCGCCGGGATGATCTACGCGGTGGTCCACGTCTCGCCGACCCCGGAAATGACCGGACGGATCTTCGCCAGCGCCGGCGTGGTGCTCGGCGTGGTCTCGCTGGTGGCGGTGGTGTGGATCAAGGGCGTGATGCGCAAGCCCCTCTTCGTACCCGAACCGCTCGAGACGGCCGGTGAGACTGCCCAGGGCAAGTCCGTCGCCCTCGATCCCCTGCAATCCCCTTCGGCCTGA MNDTPNVREPALRRVLGLGPLLAVAIGLVVSQGVMVLMLQGAGTAGLGFIVPLGVAYLLALSYAFSFSELALMIPRAGSLSSYTEVAIGHFPAILATFSGYVVVAMFALSAELLLLDLIIGKVYPGALPPMLVAYGVLGLFTLLNLLGIDIFARLQSALALLMMIVLLVLGLGAVSSDHASAQTALASGWNPLGVSALALTAMAVWGFVGAEFVCPLVEETRRPERNIPRSMILGLSIIFLTIALYCFGALLCIPQAELAGDPLPHFLFANRVFGEYGQLFLVIAAITATCSTLNSSLAAIPRMLYGMAQNGQAFPQFKQLSRRARTPWVAVLFVAAITGLPILILGQDPDSINLLLLAAALAWLLAYIIAHVDVLALRRRYPHIARPFRTPFYPLPQLFGIAGMIYAVVHVSPTPEMTGRIFASAGVVLGVVSLVAVVWIKGVMRKPLFVPEPLETAGETAQGKSVALDPLQSPSA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0221 CDS 250231 251613 + probable aminotransferase Class 3 NP_248912.1 15595418 54% similar to putative aminotransferase Y4uB [Rhizobium sp. NGR234] PS00600: Aminotransferases class-III pyridoxal-phosphate attachment site Putative enzymes Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0009102|biotin biosynthetic process|IEA ; molecular_function|GO:0004015|adenosylmethionine-8-amino-7-oxononanoate transaminase activity|IEA TIGR00508|bioA|adenosylmethionine-8-amino-7-oxononanoate transaminase|equivalog|7.9e-47|2.6.1.62|Biosynthesis of cofactors, prosthetic groups, and carriers|Biotin PF00202|Aminotran_3, Aminotransferase class-III|39|390|3e-78 COG0161|BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]. ; COG0161|BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]. ; COG0161|BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]. ATGACCGCTCAGCTCAACCCGCAGCGCGACACCCGCGACTACCAGCAACTGGACGCCGCGCACCACATCCACGCCTTCCTCGACCAGAAGGCGCTGAACCGCGAAGGCCCGCGGGTGATGGTCCGCGGCGATGGCCTGCAGCTCTGGGACAACGACGGCAAGCGCTACCTGGACGGCATGTCCGGCCTCTGGTGCACCAACCTCGGCTACGGCCGCCAGGACCTCGCCGCCGCCGCCAGCCGCCAGCTGGAACAACTGCCGTACTACAACATGTTCTTCCACACCACCCACCCGGCGGTGGTGGAGCTTTCCGAGATGCTCTTCAGCCTGCTGCCGGACCACTACAGCCACGCGATCTACACCAACTCCGGCTCCGAGGCCAACGAGGTGCTGATCCGTACCGTGCGGCGCTACTGGCAGATCCTCGGCAAGCCGCAGAAGAAGATCATGATCGGCCGCTGGAACGGCTACCACGGCTCGACCCTGGGCAGCACCGCGCTCGGCGGGATGAAGTTCATGCACGAGATGGGCGGCATGCTGCCGGACTTCGCCCACATCGACGAACCCTACTGGTACGCCAACGGCGGCGAGCTGAGCCCGGCCGAGTTCGGTCGCCGCGCGGCGCTGCAACTGGAGGAGAAGATCCTCGAACTGGGCGCGGAGAACGTCGCCGCCTTCGTCGCCGAGCCCTTCCAGGGCGCCGGCGGCATGATCTTCCCGCCGCAAAGCTATTGGCCGGAGATCCAGCGCATCTGCCGGCAGTACGACGTGCTGCTGTGCGCCGACGAAGTGATCGGCGGCTTCGGCCGCACCGGCGAATGGTTCGCCCACGAACACTTCGGCTTCCAGCCGGACACCCTGTCCATCGCCAAGGGCCTGACGTCCGGCTACATCCCCATGGGCGGCCTGGTACTCGGCAAGCGCATCGCCGAGGTGCTGGTGGAGCAGGGCGGGGTGTTCGCCCACGGCCTGACCTATTCCGGCCACCCGGTGGCGGCGGCGGTGGCCATCGCCAACCTCAAGGCGCTGCGCGACGAGGGCGTGGTCACGCGGGTCAGGGAGGAGACCGGCCCCTACCTGCAACGCTGCCTGCGCGAGGTCTTCGGCGACCATCCGCTGGTCGGCGAGGTCCAGGGCGCCGGCTTCGTCGCCGCGCTGCAGTTCGCCGAGGACAAGGTGACCCGCAAGCGCTTCGCCAACGAGAACGATCTGGCCTGGCGCTGCCGCACCATCGGCTTCGAGGAGGGCGTGATCATCCGCTCCACCCTCGGCCGCATGATCATGGCCCCGGCGCTGGTGGCCGGGCGTGCCGAGATCGACGAACTGATCGACAAGACCCGTATCGCGGTGGATCGCACCGCGCGCGAGATCGGCGTGCTCTGA MTAQLNPQRDTRDYQQLDAAHHIHAFLDQKALNREGPRVMVRGDGLQLWDNDGKRYLDGMSGLWCTNLGYGRQDLAAAASRQLEQLPYYNMFFHTTHPAVVELSEMLFSLLPDHYSHAIYTNSGSEANEVLIRTVRRYWQILGKPQKKIMIGRWNGYHGSTLGSTALGGMKFMHEMGGMLPDFAHIDEPYWYANGGELSPAEFGRRAALQLEEKILELGAENVAAFVAEPFQGAGGMIFPPQSYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFQPDTLSIAKGLTSGYIPMGGLVLGKRIAEVLVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVTRVREETGPYLQRCLREVFGDHPLVGEVQGAGFVAALQFAEDKVTRKRFANENDLAWRCRTIGFEEGVIIRSTLGRMIMAPALVAGRAEIDELIDKTRIAVDRTAREIGVL Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0222 CDS 251777 252835 + hypothetical protein Class 4 NP_248913.1 15595419 PMID:15687295 50% similar to putative mannopine-binding periplasmic protein MotA [Agrobacterium tumefaciens] type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 28) ; type I export signal computationally predicted by Phobius (cleavage after residue 30) ; type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 28) ; Export across inner membrane confirmed by PhoA fusion screen Hypothetical, unclassified, unknown Periplasmic[Class 3] ; Unknown[Class 3] PF01547|SBP_bac_1, Bacterial extracellular solute-binding protein|42|290|8e-08 COG0687|PotD, Spermidine/putrescine-binding periplasmic protein [Amino acid transport and metabolism]. ; COG0687|PotD, Spermidine/putrescine-binding periplasmic protein [Amino acid transport and metabolism]. ; COG0687|PotD, Spermidine/putrescine-binding periplasmic protein [Amino acid transport and metabolism]. ATGTTCAAGTCCTTGCACCAGTACGCACACGTGTTTTCCCGGTTGTCCCTGTTCGGCCTGGCGTTCGCCGCGGCGGCCCAGGCGCAGAGCCAGAGCCTGACTGTGATCTCCTTCGGCGGCGCGACCAAGGCCGCCCAGGAACAGGCCTATTTCAAACCCTTCGAGCGAAGCGGCGGCGGGCAGGTGGTCGCCGGCGAATACAACGGCGAAATGGCCAAGGTGAAGGCCATGGTCGACGTCGGCAAGGTCAGCTGGGACGTGGTCGAGGTGGAGAGCCCCGAACTGCTCCGCGGCTGCGACGAGGGGCTGTTCGAACGCCTCGACCCGGCGCGTTTCGGCGACCCCGCGCAGTTCGTCCCCGGCACTTTCAGCGAGTGCGGGGTGGCCACCTACGTCTGGTCGATGGTGATGGCCTACGACTCGACGAAGCTGGCCAGGGCGCCGCAGTCCTGGGCGGATTTCTGGAACGTCCGCGAGTTCCCCGGCAAGCGTGGCCTGCGCAAGGGCGCCAAGTACACCCTGGAAGTGGCGTTGCTGGCCGACGGGGTGAAGGCGGAGGACCTCTACAAGGTACTTGCCACCCCGGAGGGGGTCAGCCGCGCCTTCGCCAAGCTCGACCAGCTCAAGCCGAACATCCAGTGGTGGGAGGCCGGCGCCCAGCCGCCGCAATGGCTGGCGGCCGGCGACGTGGTGATGAGCGCGGCCTACAACGGGCGCATCGCCGCTGCGCAGAAGGAGGGGGTGAAACTGGCCATCGTCTGGCCCGGCAGTCTCTACGATCCGGAGTACTGGGCGGTGGTGAAGGGCACGCCGAACAAGGCGCTGGCGGAGAAATTCATCGCCTTCGCCAGCCAGCCGCAGACGCAGAAGGTGTTCTCCGAGCAGATCCCCTACGGGCCGGTACACAAGGGCACCCTGGCGTTGCTGCCGAAGACGGTGCAGGAGGCGCTGCCGACCGCGCCGGCCAACCTCGAAGGCGCGCGGGCGGTGGATGCCGAGTTTTGGGTGGACCACGGCGAGGAGCTGGAACAGCGTTTCAATGCCTGGGCGGCGCGCTGA MFKSLHQYAHVFSRLSLFGLAFAAAAQAQSQSLTVISFGGATKAAQEQAYFKPFERSGGGQVVAGEYNGEMAKVKAMVDVGKVSWDVVEVESPELLRGCDEGLFERLDPARFGDPAQFVPGTFSECGVATYVWSMVMAYDSTKLARAPQSWADFWNVREFPGKRGLRKGAKYTLEVALLADGVKAEDLYKVLATPEGVSRAFAKLDQLKPNIQWWEAGAQPPQWLAAGDVVMSAAYNGRIAAAQKEGVKLAIVWPGSLYDPEYWAVVKGTPNKALAEKFIAFASQPQTQKVFSEQIPYGPVHKGTLALLPKTVQEALPTAPANLEGARAVDAEFWVDHGEELEQRFNAWAAR Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0223 CDS 252913 253794 - probable dihydrodipicolinate synthetase Class 3 NP_248914.1 15595420 55% similar to putative dihydrodipicolinate synthase [Archaeoglobus fulgidus] PS00665: Dihydrodipicolinate synthetase signature 1 lysine, threonine and methionine biosynthesis [PseudoCyc] ; lysine and diaminopimelate biosynthesis [PseudoCyc] Cell wall / LPS / capsule ; Amino acid biosynthesis and metabolism Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0009089|lysine biosynthetic process via diaminopimelate|IEA ; molecular_function|GO:0008840|dihydrodipicolinate synthase activity|IEA TIGR00674|dapA|dihydrodipicolinate synthase|equivalog|3.6e-34|4.2.1.52|Amino acid biosynthesis|Aspartate family PF00701|DHDPS, Dihydrodipicolinate synthetase family|7|292|1e-51 COG0329|DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]. ; COG0329|DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]. ; COG0329|DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]. ATGTCCGCATCCATCCACGGCATCATCGGCTACACCATCACCCCCTTCGCCGCCGACGGAGGTCTCGACCTGCCGGCCCTCGGCCGCTCCATCGAGCGCCTGATCGACGGCGGCGTGCACGCCATCGCCCCGCTCGGCAGCACCGGCGAAGGCGCCTACCTGAGCGACCCGGAATGGGACGAGGTGGTCGACTTCACCCTGAAGACCGTCGCCCATCGCGTGCCGACCATCGTCAGCGTCTCCGACCTGACCACCGCCAAGACCGTGCGCCGCGCGCAGTTCGCCGAATCCCTCGGCGCCGAGGCGGTGATGGTCCTGCCGATCTCCTACTGGAAGCTCAACGAGGCGGAAGTGTTCCAGCACTACCGCGCGGTGGGCGAAGCCATCGGCGTGCCGGTGATGCTCTACAACAACCCGGGCACCAGCGGCATCGACATGTCGGTGGAACTGATCCTGCGCATCGTCCGCGAAGTGGACAACGTGACCATGGTCAAGGAGAGCACCGGCGACATCCAGCGCATGCACAAGCTGCGCCTGCTCGGCGAAGGCCGGGTGCCCTTCTACAACGGCTGCAACCCGCTGGCGCTGGAGGCCTTCGTGGCCGGCGCGAAAGGCTGGTGCAGCGCCGCGCCGAACCTGATCCCGACGCTCAACGGCCAGCTCTACCAGGCGGTGCTCGACGGCGACCTGGAGAAGGCCCGCGCGCTGTTCTACCGGCAGTTGCCGCTGCTCGACTTCATCCTCCGCCGGGGCCTGCCGACCACCATCAAGGCCGGCCTGGGCCTCTCCGGCCTGGAGGTGGGGGCGCCGCGCCTTCCGGTGCAGGCGCTGGATACCGAGGGCTGTCGGTATCTGCAGGGGTTGTTGGAAGAGCTGCGCTGA MSASIHGIIGYTITPFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRIVREVDNVTMVKESTGDIQRMHKLRLLGEGRVPFYNGCNPLALEAFVAGAKGWCSAAPNLIPTLNGQLYQAVLDGDLEKARALFYRQLPLLDFILRRGLPTTIKAGLGLSGLEVGAPRLPVQALDTEGCRYLQGLLEELR Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0224 CDS 253854 254636 - probable aldolase Class 3 NP_248915.1 15595421 48% similar to fuculose-1-phosphate aldolase FucA [Escherichia coli] PF00596: Class II Aldolases and Adducin N-terminal domain gluconeogenesis [PseudoCyc] ; sorbitol metabolism [PseudoCyc] ; glycolysis+Entner-Doudoroff [PseudoCyc] ; anaerobic glycolysis [PseudoCyc] ; glycolysis [PseudoCyc] ; glycolysis+TCA+glyoxylate bypass [PseudoCyc] ; [PseudoCyc] Putative enzymes Unknown[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0042355|L-fucose catabolic process|IEA ; molecular_function|GO:0008738|L-fuculose-phosphate aldolase activity|IEA TIGR01086|fucA|L-fuculose phosphate aldolase|equivalog|1.1e-06|4.1.2.17|Energy metabolism|Sugars PF00596|Aldolase_II, Class II Aldolase and Adducin N-terminal domain|33|211|5e-38 COG0235|AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Carbohydrate transport and metabolism]. ; COG0235|AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Carbohydrate transport and metabolism]. ; COG0235|AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Carbohydrate transport and metabolism]. ATGGCTACGACACTGGAATTACCCAAGGATCAACTGATCCAGCACGCGCTGAAGCAGATGAAAAGCAGCCTCGGCGATAATACGTGGACTGACCGGCAAAAGCTGGCCCTGACCTGCCGGATTCTCTTCGAGGCCGGCCACGACTCCGGGCTCGCCGGGCAGATCACCTCGCGCGGCCCGGAGGCGGGGACCTACTACACCCAGCAACTGGGCCTGGGCTTCGACGAGATCAGCGCCGGCAACCTGCTGCTGGTCGACGAAGACCTCAACGTCCTCCACGGGCACGGCATGGCGAATCCGGCCAATCGCTTCCACAGCTGGGTCTATCGCGCCCGCCCGGACGTCAACTGCATCATCCACACCCACCCGCTGCACATCGCCGCGCTGTCGACCCTGGAAGTACCGCTGCAGGTCTCGCACATGGACCTTTGCCCGCTATACGACGACTGCGCCTTCCTCAAGGACTGGCCGGGCGTGCCGGTAGGCAACGAGGAAGGCGAGATCATCTCCGCCGCCCTCGGCGACAAGCGCGCCATCCTGCTCTCCCATCACGGCCTGCTGGCCACCGGTGCAAGCATCGAGGAGGCCTGCGTGATCGCGGTGCTGCTCGAGCGCGCGGCGAAGATGCAGTTGCTGGCGATGGCCGCCGGGGAGATCAAGCCGATCCCGCCGGCCCTGGCGCGCGAGGCCCACGACTGGATCTCCACCCCGAAGCGCCACGGCGCCGCATTCAACTACTACGCCCGGCGCTGCCTGCCGCGCAACAGCGACTGCCTGAGCTGA MATTLELPKDQLIQHALKQMKSSLGDNTWTDRQKLALTCRILFEAGHDSGLAGQITSRGPEAGTYYTQQLGLGFDEISAGNLLLVDEDLNVLHGHGMANPANRFHSWVYRARPDVNCIIHTHPLHIAALSTLEVPLQVSHMDLCPLYDDCAFLKDWPGVPVGNEEGEIISAALGDKRAILLSHHGLLATGASIEEACVIAVLLERAAKMQLLAMAAGEIKPIPPALAREAHDWISTPKRHGAAFNYYARRCLPRNSDCLS Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0225 CDS 254791 255330 + probable transcriptional regulator Class 3 NP_248916.1 15595422 51% similar to putative epoxidase [Methanobacterium thermoautotrophicum] PF01381: Helix-turn-helix. This large family of DNA binding helix-turn helix proteins includes Cro and CI Transcriptional regulators Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] PF07883|Cupin_2, Cupin domain|121|175|1e-10 COG1476|COG1476, Predicted transcriptional regulators [Transcription]. ; COG1476|COG1476, Predicted transcriptional regulators [Transcription]. ; COG1476|COG1476, Predicted transcriptional regulators [Transcription]. ATGTCCATGCGCTTGAAATTGCTGAGAAAAAAACTCGGGGTCACGCTGGAGACCCTGGCCGAGAAGACCGGCCTGACCAAGAGCTACCTGTCCAAGGTCGAGCGCGGGCTGAACACGCCGTCCATTGCCGCCGCGCTGAAGCTGGCGAAGGCGTTGAACGTGCAGGTGGAGGAGCTGTTCTCCGAGGAAAGCGACGGTGTCGACGGCTACAGCATCGTTCGTCGCGACCAGCGCAAGTCGCTGTCCAGCGGCGACGACGGCCCGGCCTACGCCTCCCTCGCGCAGCAGATCGGCGCCCGCGCGCTGTTGCCGTTCATCGTCCACCCCCCGCGCGATTTCAGTCACTCGACGTTCAAGGAGCACCTCGGCGAAGAGTTCATCTTCGTCCATGAGGGCCAGGTCGAGGTCGACTTCATGAACCAGCGGATCATCCTCGAGCGCGGCGACGCCCTGCATTTCAACGCACAGAAGCCGCACCGCATCCGCTCCCTGGGGGAGACCCAGGCGGAATTGCTGGTGGTGATCCACAGCGACGAATGA MSMRLKLLRKKLGVTLETLAEKTGLTKSYLSKVERGLNTPSIAAALKLAKALNVQVEELFSEESDGVDGYSIVRRDQRKSLSSGDDGPAYASLAQQIGARALLPFIVHPPRDFSHSTFKEHLGEEFIFVHEGQVEVDFMNQRIILERGDALHFNAQKPHRIRSLGETQAELLVVIHSDE Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0226 CDS 255481 256332 + probable CoA transferase, subunit A Class 3 NP_248917.1 15595423 PMID:97238937 ; PMID:9083111 51% similar to glutaconate CoA-transferase subunit A [Acidaminococcus fermentans] BL01273: CoA transferases proteins protocatechuate degradation, ortho-cleavage [PseudoCyc] ; catechol degradation, ortho-cleavage [PseudoCyc] Carbon compound catabolism Cytoplasmic[Class 2] ; Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] TIGR02429|pcaI_scoA_fam|3-oxoacid CoA-transferase, A subunit|subfamily|7e-06|2.8.3.-|No Data|No Data PF01144|CoA_trans, Coenzyme A transferase|4|203|2e-20 COG1788|AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit [Lipid metabolism]. ; COG1788|AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit [Lipid metabolism]. ; COG1788|AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit [Lipid metabolism]. ATGGCTGAAATCCTCTCCCTGCGCGAAGCGGTGCGACGCTTCGTCCACGATGGCGACAGCGTCGCCCTCGAAGGCTTCACTCACCTGATCCCGACGGCCGCCGGCCACGAGCTGATCCGCCAGGGCAGGAAAGACCTGACGCTGATCCGCATGACTCCCGACCTGGTCTACGACCTGCTGATCGGTGCAGGCTGCGCGAAGAAGCTGGTGTTCTCCTGGGGCGGCAACCCCGGCGTCGGTTCGCTGCACCGCCTGCGCGACGCGGTGGAGAAGGGCTGGCCGCAACCGCTGGAGATCGAGGAACACAGCCACGCCGACCTCGCCAACGCCTATGTCGCCGGCGCCTCCGGGCTGCCCTTCGCAGTGCTGCGCGCCTACGCCGGCTCCGACCTGCCGAAGGTCAACCCGCTGATCCGCAGCGTCACCTGCCCGTTCACCGGCGAAGTGCTGGCGGCGGTGCCCTCGGTGCGTCCGGACGTCAGCGTGATCCACGCGCAGAAGGCCGACCGCAAGGGCAACGTGCTGCTCTGGGGCATCCTCGGCGTGCAGAAGGAAGCGGCCCTGGCGGCGAAGCGCTGCATCGTCACCGTCGAGGAGATCGTCGACGAACTGGACGCCCCGATGAACGCCTGCGTCCTGCCGAGCTGGGCGCTCAGCGCCGTGTGCCTGGTGCCCGGCGGCGCGCATCCGTCCTATGCCCACGGCTACTACGAGCGCGACAACCGCTTCTACCAGGACTGGGACCCGATCGCCCGCGACCGCGAAAGCTTCACCGCGTGGATCGACGAATACATCCGGGGGACCGAGGATTTCGGGGCCTTCCAGGCCAAGCTCGCGGAGGGCAAGCGATGA MAEILSLREAVRRFVHDGDSVALEGFTHLIPTAAGHELIRQGRKDLTLIRMTPDLVYDLLIGAGCAKKLVFSWGGNPGVGSLHRLRDAVEKGWPQPLEIEEHSHADLANAYVAGASGLPFAVLRAYAGSDLPKVNPLIRSVTCPFTGEVLAAVPSVRPDVSVIHAQKADRKGNVLLWGILGVQKEAALAAKRCIVTVEEIVDELDAPMNACVLPSWALSAVCLVPGGAHPSYAHGYYERDNRFYQDWDPIARDRESFTAWIDEYIRGTEDFGAFQAKLAEGKR Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0227 CDS 256329 257111 + probable CoA transferase, subunit B Class 3 NP_248918.1 15595424 pcaJ PMID:97238937 ; PMID:9083111 55% similar to glutaconate CoA-transferase subunit B [Acidaminococcus fermentans] protocatechuate degradation, ortho-cleavage [PseudoCyc] ; catechol degradation, ortho-cleavage [PseudoCyc] Carbon compound catabolism Cytoplasmic[Class 2] ; Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] TIGR02428|pcaJ_scoB_fam|3-oxoacid CoA-transferase, B subunit|subfamily|9.2e-10|2.8.3.-|No Data|No Data PF01144|CoA_trans, Coenzyme A transferase|6|217|3e-44 COG2057|AtoA, Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit [Lipid metabolism]. ; COG2057|AtoA, Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit [Lipid metabolism]. ; COG2057|AtoA, Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit [Lipid metabolism]. ATGAGCAGCTACAGCACCAACGAGATGATGACCGTGGCCGCCGCCCGCCGCCTGCACAACGGCGCGGTGTGCTTCGTCGGCATCGGCCTGCCGTCGAAGGCCGCCAACCTGGCGCGCCTGACTTCCTCGCCGGACGTCGTGCTGATCTACGAGTCCGGGCCGATCGGCGCCAAGCCCAGCGTCCTGCCGCTGTCCATCGGCGACGGCGAGTTGGCCGAGACCGCCGATACCGTGGTCCCCACCGGCGAGATCTTCCGCTACTGGCTGCAGGGCGGACGGATCGACGTCGGCTTCCTCGGCGCGGCCCAGGTCGACCGCTTCGGCAACATCAACACCACCGTGATCGGCGACTACCGCCAGCCCAAGGTGCGCCTGCCGGGAGCCGGCGGCGCGCCGGAAATCGCCGGCAGCGCCAAGGAAGTACTGATCATCCTCAAGCAGTCGCACCGCACCTTCGTCGACAAGCTGGCCTTCGTCACCTCGGTCGGCCATGGCGAGGGCGGCGACTCGCGCCAGCGCCTGGGCCTGCCGGGCAAGGGGCCGGTGGCGATCATCACCGACCTGTGCATCATGGAGCCGGAAGCCGGCAGCAACGAGTTCGTGGTCACTTCGCTGCATCCGGGCGTGACCCGCGAGCAGGTGGTCGAGGCCACCGGCTGGGCGATCCGCTTCGCCGAGCGGGTCGCCGAGACGCCCGCGCCGAGCGAGGTCGAACTCGCCGCGCTGCGCGACCTCGAGGCGCGCACCGCGGCCGCCCATGGACAGAAGGGGAGCGACGAATGA MSSYSTNEMMTVAAARRLHNGAVCFVGIGLPSKAANLARLTSSPDVVLIYESGPIGAKPSVLPLSIGDGELAETADTVVPTGEIFRYWLQGGRIDVGFLGAAQVDRFGNINTTVIGDYRQPKVRLPGAGGAPEIAGSAKEVLIILKQSHRTFVDKLAFVTSVGHGEGGDSRQRLGLPGKGPVAIITDLCIMEPEAGSNEFVVTSLHPGVTREQVVEATGWAIRFAERVAETPAPSEVELAALRDLEARTAAAHGQKGSDE Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0228 CDS 257108 258313 + pcaF beta-ketoadipyl CoA thiolase PcaF Class 2 NP_248919.1 15595425 PMID:95050205 ; PMID:7961399 Organization of pca genes appears to be somewhat different than in P. putida. 91% similar to PcaF [Pseudomonas putida] BL00098: Thiolases acyl-enzyme intermediate proteins Aromatic compound catabolism [PseudoCAP] ; protocatechuate degradation, ortho-cleavage [PseudoCyc] ; catechol degradation, ortho-cleavage [PseudoCyc] 2.3.1.174 Fatty acid and phospholipid metabolism ; Carbon compound catabolism Cytoplasmic[Class 2] ; Cytoplasmic[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0015978|carbon utilization by utilization of organic compounds|ISS ; biological_process|GO:0044248|cellular catabolic process|ISS ; biological_process|GO:0044255|cellular lipid metabolic process|ISS TIGR02430|pcaF|beta-ketoadipyl CoA thiolase|equivalog|4.2e-263|2.3.1.-|No Data|No Data PF00108|Thiolase_N, Thiolase, N-terminal domain|4|269|3e-78 COG0183|PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism]. ; COG0183|PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism]. ; COG0183|PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism]. ATGAGCCGCGAGGTATTCATCTGCGATGCCGTGCGCACGCCGATCGGCCGTTTCGGCGGCAGTCTTTCCGCGGTGCGCGCCGACGACCTCGCGGCGGTGCCGCTGAAGGCCCTGGTCGAGCGCAACCCGGGGGTCGACTGGTCGGCGTTGGACGAGGTGTTCCTCGGCTGCGCCAACCAGGCCGGCGAGGACAACCGTAACGTGGCGCGCATGGCGCTGCTGCTGGCCGGTTTGCCGGAGAGCGTGCCCGGCGTCACCCTCAACCGCCTCTGCGCCTCGGGGATGGACGCCATCGGCACGGCGTTCCGCGCCATCGCCTGCGGCGAGATGGAGCTGGCCATCGCCGGCGGCGTCGAGTCGATGTCGCGCGCGCCGTACGTGATGGGCAAGGCCGATAGCGCCTTCGGTCGCGGCCAGAAGATCGAGGACACCACCATCGGCTGGCGCTTCGTCAATCCGCTGATGAAGGAGCAGTACGGCATCGACCCGATGCCGCAGACCGCCGACAACGTCGCCGACGACTATCGCGTGTCGCGTGCCGACCAGGATGCCTTCGCCCTGCGCAGCCAGCAGCGCGCCGGCAGGGCGCAGGAGGCCGGTTTCTTCGCCGAGGAAATCGTCCCGGTGACGATTCGCGGGCGCAAGGGCGACACCCTGGTCGAGCACGACGAGCATCCGCGTCCCGACACCACCCTGGAGGCGCTGGCCCGGCTCAAGCCGGTCAACGGGCCGGAGAAGACCGTCACCGCCGGCAACGCGTCCGGGGTCAACGACGGCGCCGCCGCGCTGGTCCTGGCCTCCGCCGAGGCAGTGGAGAAGCACGGCCTGACTCCGCGCGCGCGGGTGCTGGGCATGGCCAGCGCCGGCGTCGCCCCACGGATCATGGGCATCGGCCCGGTGCCGGCGGTGCGCAAGCTGCTGCGGCGCCTGGACCTGGCGATCGACGCCTTCGACGTGATCGAACTCAACGAAGCCTTCGCCAGCCAGGGCCTGGCCTGCCTGCGCGAACTGGGCGTGGCCGACGACAGTGAGAAGGTCAACCCGAACGGCGGTGCCATCGCCCTCGGCCACCCGCTGGGGATGAGCGGTGCGCGGCTGGTCCTCACCGCGCTCCATCAACTTGAGAAGAGCGGCGGCCGGCGCGGCCTGGCGACCATGTGCGTAGGCGTCGGCCAAGGCCTGGCGCTGGCCATCGAGCGGGTCTGA MSREVFICDAVRTPIGRFGGSLSAVRADDLAAVPLKALVERNPGVDWSALDEVFLGCANQAGEDNRNVARMALLLAGLPESVPGVTLNRLCASGMDAIGTAFRAIACGEMELAIAGGVESMSRAPYVMGKADSAFGRGQKIEDTTIGWRFVNPLMKEQYGIDPMPQTADNVADDYRVSRADQDAFALRSQQRAGRAQEAGFFAEEIVPVTIRGRKGDTLVEHDEHPRPDTTLEALARLKPVNGPEKTVTAGNASGVNDGAAALVLASAEAVEKHGLTPRARVLGMASAGVAPRIMGIGPVPAVRKLLRRLDLAIDAFDVIELNEAFASQGLACLRELGVADDSEKVNPNGGAIALGHPLGMSGARLVLTALHQLEKSGGRRGLATMCVGVGQGLALAIERV Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0229 CDS 258463 259761 + pcaT dicarboxylic acid transporter PcaT Class 2 NP_248920.1 15595426 kgtP alpha-ketoglutarate permease PMID:91219460 ; PMID:15687295 ; PMID:2053984 83% similar to alpha-ketoglutarate permease KgtP [Escherichia coli] ; 88% similar to dicarboxylic acid transport protein [Pseudomonas putida] PS00217: Sugar transport proteins signature ; 12 predicted transmembrane helices ; 12 predicted transmembrane helices (TMHMM v.2.0) ; At least one transmembrane helix predicted by Phobius ; Export across inner membrane confirmed by PhoA fusion screen Aromatic compound catabolism [PseudoCAP] Membrane proteins ; Transport of small molecules Cytoplasmic Membrane[Class 3] ; Cytoplasmic Membrane[Class 3] biological_process|GO:0006810|transport|ISS ; biological_process|GO:0006810|transport|IEA ; cellular_component|GO:0005887|integral to plasma membrane|IEA ; cellular_component|GO:0016020|membrane|ISS ; molecular_function|GO:0015295|solute:hydrogen symporter activity|IEA TIGR00883|2A0106|MFS transporter, metabolite:H+ symporter (MHS) family protein|subfamily|2e-196||Transport and binding proteins|Unknown substrate PF07690|MFS_1, Major Facilitator Superfamily|26|378|2e-13 COG2814|AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]. ; COG2814|AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]. ; COG2814|AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]. ATGACTGCCCCTGTTCACCAGTACAGCAACGAAGAACGCCGCAAGCGCATCTTCGCCATCGTCGGCGCCTCCTCCGGCAACCTCGTGGAATGGTTCGACTTCTACGTCTACGCCTTCTGCGCGATCTACTTCGCACCGGCCTTCTTCCCCTCCGACAACCCCACGGTGCAGTTGCTGAACACCGCCGGGGTCTTCGCCGCCGGCTTCCTCATGCGCCCCATCGGCGGCTGGATGTTCGGCCGCATCGCCGACAAGCACGGGCGCAAGACCGCCATGCTGATCTCGGTGGTGATGATGTGCGCCGGCTCCCTGGCGATCGCCTGCATGCCCACCTACGCCAGCATCGGCACCCTGGCGCCGGCGCTGCTGTTGCTGGCGCGGATGTTCCAGGGCCTGTCGGTGGGCGGCGAGTACGGCACCAGCGCGACCTACATGAGCGAGGTGGCGCTCAAGGGCCAGCGCGGCTTCTTCGCCTCGTTCCAGTACGTCACCCTGATCGGCGGACAGTTGCTGGCGGTGCTGGTGGTGGTGATCCTGCAGCAGTTGCTGAGCGAAGACGAACTGCGCGCCTGGGGCTGGCGGATTCCCTTCGTGATCGGCGCGATCACCGCGGTGATCGCCCTCTGGCTGCGGCGCTCGCTGAACGAGACCGCTTCGAAGTCGACCCTGGAGCGCAAGGAATCCGGCACCTTCGCCGAGCTGTTCAAGCACAAGCGGGCCTTCTTCACCGTGCTCGGCTTCACCGCCGGCGGCTCGCTGATCTTCTACACCTTCACCACCTACATGCAGAAGTACCTGGTCAACACCGCCGGGATGAGCGCCAAGACCGCCAGCGCGGTGATGACCTTCGCCCTGCTGGCGTACATGCTGATGCAACCGCTGTTCGGCATGCTTTCCGATCGCATCGGGCGCAAGACCTCGATGCTCTGGTTCGGCACCCTGGGCACGCTCTGCACCCTGCCGATCCTGCTCGCGCTGAAGACCGTGAGCAGTCCCTACATGGCCTTCTTCCTGATCATCCTGGCGCTGGCCATCGTCAGCCTGTACACCTCCATCAGCGGCCTGATCAAGGCCGAGATGTTCCCGCCGGAGGTGCGCGCCCTCGGCGTCGGAGTGTCCTACGCGGTGGGCAACGCGATCTTCGGCGGCTCGGCCGAGTACGTCGCCCTGGGGCTGAAGTCGGTAGGGATGGAGAACGTCTTCTACTGGTATGTTTCAGCCATGTGCCTGCTGGCGCTGCTGGTCTGCGTGAGCCTGCCGGACCTGCGCAAGGTCAGCTACCTGAACGACGAGCCCTGA MTAPVHQYSNEERRKRIFAIVGASSGNLVEWFDFYVYAFCAIYFAPAFFPSDNPTVQLLNTAGVFAAGFLMRPIGGWMFGRIADKHGRKTAMLISVVMMCAGSLAIACMPTYASIGTLAPALLLLARMFQGLSVGGEYGTSATYMSEVALKGQRGFFASFQYVTLIGGQLLAVLVVVILQQLLSEDELRAWGWRIPFVIGAITAVIALWLRRSLNETASKSTLERKESGTFAELFKHKRAFFTVLGFTAGGSLIFYTFTTYMQKYLVNTAGMSAKTASAVMTFALLAYMLMQPLFGMLSDRIGRKTSMLWFGTLGTLCTLPILLALKTVSSPYMAFFLIILALAIVSLYTSISGLIKAEMFPPEVRALGVGVSYAVGNAIFGGSAEYVALGLKSVGMENVFYWYVSAMCLLALLVCVSLPDLRKVSYLNDEP Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0230 CDS 259784 261163 + pcaB 3-carboxy-cis,cis-muconate cycloisomerase Class 2 NP_248921.1 15595427 PMID:93003135 ; PMID:1390752 87% similar to 3-carboxy-cis,cis-muconate cycloisomerase [Pseudomonas putida] BL00163: Fumarate lyases proteins Aromatic compound catabolism [PseudoCAP] ; protocatechuate degradation, ortho-cleavage [PseudoCyc] 5.5.1.2 Carbon compound catabolism Unknown[Class 3] ; Cytoplasmic[Class 3] biological_process|GO:0009712|catechol metabolic process|RCA ; biological_process|GO:0015978|carbon utilization by utilization of organic compounds|ISS ; biological_process|GO:0044248|cellular catabolic process|ISS ; molecular_function|GO:0018842|3-carboxymuconate cycloisomerase type II activity|RCA ; molecular_function|GO:0047472|3-carboxy-cis,cis-muconate cycloisomerase activity|IEA TIGR02426|protocat_pcaB|3-carboxy-cis,cis-muconate cycloisomerase|equivalog|2.3e-207|5.5.1.2|Energy metabolism|Other PF10397|ADSL_C, Adenylosuccinate lyase C-terminus|367|446|1e-20 COG0015|PurB, Adenylosuccinate lyase [Nucleotide transport and metabolism]. ; COG0015|PurB, Adenylosuccinate lyase [Nucleotide transport and metabolism]. ; COG0015|PurB, Adenylosuccinate lyase [Nucleotide transport and metabolism]. ATGAGCGACGTACCCGCCAACCAGTTGTTCGATGCCTATTTCATGGCGGCGCCGATGCGCGCGGTGTTCTCCGACCGCGGCCGCCTGCAAGGCATGCTCGACTTCGAGGCCGCCCTGGCCCGCGCCGAGGCGCGCACCGGGGTGGTTCCCGCGACGGCGGTGGCGCCGATCGAGGCGGCCTGCCGCGCCGAACTGTACGACCCGCTGGCGCTGGCCGAGGCGGTCGCCACTGCCGGCAACTCGGCGATCCCGCTGGTCAAGGCGCTGGGCCGCCAGGTGGCGGCTGGCGACGCCGAGGCCGAGCGCTACGTGCATCTCGGCGCCACCAGCCAGGACGCCATGGACAGCGGCCTGGTGCTGCAACTGCGCCGTGCGCTGGCCTTGCTCGAGCAGGATCTGCAACGTCTTGCCGAGGTCCTGGCGGACCAGGCCGAACGGCATGCCGACACGCCGCTGGCCGGGCGCACCTGGTTGCAGCACGCCACCCCGGTGACCCTGGGCATGAAGCTCGCCGGCCTGCTCGGTGCCTTGACCCGGCACCGCCAGCGCCTGCGCGAGTTGCGCCCGCGCCTGCTGGTGCTGCAATTCGGCGGCGCCTCGGGGACGCTCGCCGCGCTCGGCGAACAGGCCCTGCCGGTGGCCGCGGCGCTGGCCGAGGAGCTGGGCCTGGCTTTGCCCGAACAACCCTGGCACACCCAGCGCGACCGCCTGGTGGAATTCGCCAGCGTGCTCGGCCTGGTGGCCGGTAGCCTCGGCAAGTTCGGTCGCGATGTCAGCCTGCTGATGCAGACCGAGGCCGGCGAGGTCTTCGAGCCGGCCGGCGCCGGGCGCGGCGGTTCCTCGACCATGCCGCACAAGCGCAACCCGGTGAGCAGCGCGGTGCTGATCGCCGCCGCCACCCGTGCGCCGGGGCTGGTCTCGACCCTGTTCGCGGCGATGCCGCAGGAACACGAGCGCAGCCTCGGTCTCTGGCACGCCGAGTGGGAAACCCTGCCGGAACTCTGTTGCCTGGTTGCCGGCGCGCTGCAACAGGCGATCGGCCTGCTCGAAGGCCTGGAGGTGGACGCCCAGCGGATGCGCCGCAACCTTGGCCTGACCCACGGCCTGGTGCTCGCCGAGGCGGTGAGCATCGCCCTGGCCCGCCGTATCGGCCGCGAAGCCGCGCACCATCTGGTGGAACAGTGCTGCCGCCGCGCCGTCGAGCAGCGCCGCGAGTTGCGCGCGGTGCTCGGCGAAGAGGCGCGGGTGAGCGCCGAGTTGTCCGGCGACGAACTGGACCGCCTGCTCGATCCCGCCCATTACCTCGGCCAGGCCCGCGCCTGGGTCGAGCGCGCGCTCGCCGAACACCATGCCCTGGGCTTCGAACCCCATCCCGCCTGA MSDVPANQLFDAYFMAAPMRAVFSDRGRLQGMLDFEAALARAEARTGVVPATAVAPIEAACRAELYDPLALAEAVATAGNSAIPLVKALGRQVAAGDAEAERYVHLGATSQDAMDSGLVLQLRRALALLEQDLQRLAEVLADQAERHADTPLAGRTWLQHATPVTLGMKLAGLLGALTRHRQRLRELRPRLLVLQFGGASGTLAALGEQALPVAAALAEELGLALPEQPWHTQRDRLVEFASVLGLVAGSLGKFGRDVSLLMQTEAGEVFEPAGAGRGGSSTMPHKRNPVSSAVLIAAATRAPGLVSTLFAAMPQEHERSLGLWHAEWETLPELCCLVAGALQQAIGLLEGLEVDAQRMRRNLGLTHGLVLAEAVSIALARRIGREAAHHLVEQCCRRAVEQRRELRAVLGEEARVSAELSGDELDRLLDPAHYLGQARAWVERALAEHHALGFEPHPA Pseudomonas aeruginosa PAO1 NC_002516 Chromosome PA0231 CDS 261179 261970 + pcaD beta-ketoadipate enol-lactone hydrolase Class 2 NP_248922.1 15595428 PMID:98250612 ; PMID:9582432 63% similar to B-ketoadipate enol-lactone hydrolase [Bradyrhizobium japonicum] PR00412: Epoxide hydrolase signature ; PR00111: Alpha/beta hydrolase fold signature Aromatic compound catabolism [PseudoCAP] ; protocatechuate degradation, ortho-cleavage [PseudoCyc] ; catechol degradation, ortho-cleavage [PseudoCyc] 3.1.1.24 Carbon compound catabolism Unknown[Class 3] ; Unknown[Class 3] biological_process|GO:0015978|carbon utilization by utilization of organic compounds|ISS ; biological_process|GO:0019614|catechol catabolic process|RCA ; biological_process|GO:0042952|beta-ketoadipate pathway|IEA ; biological_process|GO:0044248|cellular catabolic process|ISS ; molecular_function|GO:0016788|hydrolase activity, acting on ester bonds|RCA ; molecular_function|GO:0047570|3-oxoadipate enol-lactonase activity|IEA TIGR02427|protocat_pcaD|3-oxoadipate enol-lactonase|equivalog|3.4e-138|3.1.1.24|Energy metabolism|Other PF00561|Abhydrolase_1, alpha/beta hydrolase fold|48|258|2e-17 COG0596|MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]. ; COG0596|MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]. ; COG0596|MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]. GTGCCAACCGTACGCCTCGCCGACGGCGACCTGAACTACTCCCTGGAAGGACCGGCCGGCGCGCCGGTCCTGCTGTTGTCAAACTCGCTGGGCACCGACCTGGGCATGTGGGACACGCAGATCCCCGCACTCACCGCCCATTTCCGCGTGCTGCGCTACGACACCCGCGGCCACGGCGCCTCGCTGGTCACCCCCGGACCGTACGCCATCGGCCAGCTCGGCGCCGACGTGCTTGCCCTGCTCGATGCCCTCGAGCTGCCGCGCGTGCATTTCTGCGGGCTGTCCATGGGCGGCCTGATCGGCCAGTGGCTGGGCATCCACGCCGGCGAGCGGCTCGGCCGGCTGGTGCTGTGCAACACCGCGGCGAAGATTGCCAGCGACGAGGTCTGGAACACCCGCATCGATACCGTCCTGAAAGGCGGCGAGCAGGCCATGCGTGACCTGCGCGACGCCTCGGTGGCGCGCTGGTTCACCGCGGGCTTCGCCGAGCGCGAACCGGCGCAGGTCGAGCGCATCGTCGCGATGCTCGCGGCCACCTCGCCGCAGGGCTACGCGGCCAACTGCGCTGCGGTACGCGACGCCGATTTCCGCGAGCAGCTCGGGCTGGTCCAGGCGCCGACGCTGATCGTCGCCGGCAGCCACGATGCCGTGACCACTCCGGACAACGCCCGCTTCATGCAGGCGCGCATCGCCGACGCGCAGTTGGTCGAGTTCGCCGCCGCGCACCTGTCCAACGTCGAAGCGGGCGACGCCTTCAGCCGCCGCCTGGTCGATTTCCTGCTGTCCGCCTGA MPTVRLADGDLNYSLEGPAGA