Pseudomonas aeruginosa PAO1, PA0077 (icmF1)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
PseudoCAP		Hcp secretion island I (HSI-I) type VI secretion system		ECO:0000037 not_recorded
KEGG	pae03070	Bacterial secretion system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pae02025	Biofilm formation - Pseudomonas aeruginosa	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
CDD	cd00882	Ras_like_GTPase	-	-	55	198	0.0074833
Pfam	PF06761	Intracellular multiplication and human macrophage-killing	IPR009612	IcmF-related	429	722	2.5E-86
Pfam	PF14331	IcmF-related N-terminal domain	IPR025743	IcmF-related, N-terminal domain	120	377	4.1E-99
Coils	Coil	Coil	-	-	21	41	-
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	IPR027417	P-loop containing nucleoside triphosphate hydrolase	50	219	1.34E-11
NCBIfam	TIGR03348	JCVI: type VI secretion system membrane subunit TssM	IPR017731	Type VI secretion system protein TssM1-like	8	1099	0.0
Pfam	PF06744	Type VI secretion protein IcmF C2-like domain	IPR010623	Type VI secretion system IcmF, C-terminal	976	1082	2.3E-28
PANTHER	PTHR36153	INNER MEMBRANE PROTEIN-RELATED	-	-	3	1101	0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.