Pseudomonas aeruginosa PAO1, PA0229 (pcaT)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Biological Process GO:0006810 transport
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00217
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00217
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00083
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005215 transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00217
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other PAO1 genes in this class
Transport of small molecules Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Aromatic compound catabolism ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.1250.20 16 431 2.5E-68
CDD cd06174 MFS IPR020846 Major facilitator superfamily domain 20 417 1.21914E-22
SUPERFAMILY SSF103473 IPR036259 MFS transporter superfamily 12 424 2.62E-67
TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein IPR004736 MFS transporter, metabolite:H symporter 26 412 1.1E-139
ProSitePatterns PS00217 Sugar transport proteins signature 2. IPR005829 Sugar transporter, conserved site 129 154 -
Pfam PF07690 Major Facilitator Superfamily IPR011701 Major facilitator superfamily 265 420 5.3E-12
ProSiteProfiles PS50850 Major facilitator superfamily (MFS) profile. IPR020846 Major facilitator superfamily domain 19 424 36.857
Pfam PF00083 Sugar (and other) transporter IPR005828 Major facilitator, sugar transporter-like 21 217 3.1E-24

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.