Pseudomonas aeruginosa PAO1, PA0262 (vgrG2b)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Cellular Component	GO:0033104	type VI protein secretion system complex	IGC Inferred from Genomic Context		21325275	Reviewed by curator
Biological Process	GO:0033103	protein secretion by the type VI secretion system	IGC Inferred from Genomic Context		21325275	Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pae03070	Bacterial secretion system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:4.10.220.110	-	-	-	221	284	1.6E-78
Pfam	PF04717	Type VI secretion system/phage-baseplate injector OB domain	IPR006531	Gp5/Type VI secretion system Vgr protein, OB-fold domain	386	453	8.5E-14
SUPERFAMILY	SSF69279	Phage tail proteins	-	-	197	365	2.72E-31
NCBIfam	TIGR03361	JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain	IPR017847	Type VI secretion system, RhsGE-associated Vgr family subset	9	493	0.0
Gene3D	G3DSA:2.30.110.50	-	-	-	21	328	1.6E-78
Pfam	PF13296	Putative type VI secretion system Rhs element Vgr	IPR028244	Putative type VI secretion system, Rhs element associated Vgr domain	475	581	2.0E-34
PANTHER	PTHR32305	-	-	-	3	724	0.0
Gene3D	G3DSA:3.55.50.10	-	-	-	96	187	1.6E-78
Pfam	PF05954	Phage tail baseplate hub (GPD)	-	-	27	327	5.3E-75
SUPERFAMILY	SSF69279	Phage tail proteins	-	-	9	182	2.04E-47
SUPERFAMILY	SSF69349	Phage fibre proteins	-	-	442	493	1.8E-9
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	268	291	-
NCBIfam	TIGR01646	JCVI: type VI secretion system tip protein VgrG	IPR006533	Type VI secretion system, RhsGE-associated Vgr protein	19	502	5.8E-120
SUPERFAMILY	SSF69255	gp5 N-terminal domain-like	-	-	364	451	1.31E-33
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	268	289	-
Gene3D	G3DSA:2.40.50.230	-	IPR037026	Vgr protein, OB-fold domain superfamily	358	456	1.0E-39
Pfam	PF10106	Uncharacterized protein conserved in bacteria (DUF2345)	IPR018769	Type VI secretion system spike protein VgrG2, domain of unknown function DUF2345	615	758	4.5E-48

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.