Pseudomonas aeruginosa PAO1, PA0451
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| AmrZ binding site | 507439 | 507451 | + |
ECO:0000314
direct assay evidence used in manual assertion |
24603766 | Details |
| Shine-Dalgarno sequence | 507260 | 507262 | - |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CGCCGCCGCCT-N87-AGGCGGCGGCG | 508089 | 508197 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GCCTCGCGCA-N38-TGCGCGAGGC | 508109 | 508166 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GCCCGGCGTA-N57-TACGCCGGGC | 508443 | 508519 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GATGGTGCGCA-N6-TGCGCACCATC | 509129 | 509156 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |