Pseudomonas aeruginosa PAO1, PA0706 (cat)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CGTTCAGCAG-N6-CTGCTGAACG | 780191 | 780216 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Shine-Dalgarno sequence | 780110 | 780112 | - |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| transcriptional initiation site (+1) | 779231 | 779231 | - |
|
11021926 | Details |
| RhlR binding site (lux-box) | 779305 | 779320 | - |
|
11021926 | Details |
| RhlR binding site (lux box 2) | 779335 | 779350 | - |
|
11021926 | Details |
| migA promoter | 779226 | 779275 | - |
|
11021926 | Details |
| -200 to -89 upstream region of migA gene | 779298 | 779408 | - |
|
11021926 | Details |
| putative las-box-1 upstream of migA gene | 779298 | 779408 | - |
|
11021926 | Details |
| putative las-box-2 upstream of migA gene | 779298 | 779408 | - |
|
11021926 | Details |