Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0052621 | diguanylate cyclase activity | Inferred from Direct Assay | ECO:0000005 enzyme assay evidence |
16477007 | Reviewed by curator |
Molecular Function | GO:0052621 | diguanylate cyclase activity |
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA14_49890
|
ECO:0000250 sequence similarity evidence used in manual assertion |
19543378 | Reviewed by curator |
Molecular Function | GO:0052621 | diguanylate cyclase activity | Inferred from Mutant Phenotype | ECO:0000015 mutant phenotype evidence |
19543378 | Reviewed by curator |
Biological Process | GO:0007165 | signal transduction |
Inferred from Sequence Model
Term mapped from: InterPro:SM00304
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:SM00304
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | pae02025 | Biofilm formation - Pseudomonas aeruginosa | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 238 | 411 | 2.0E-56 |
Pfam | PF17152 | Periplasmic sensor domain | IPR033417 | Periplasmic sensor domain CHASE8 | 45 | 145 | 7.4E-33 |
Gene3D | G3DSA:6.10.340.10 | - | - | - | 145 | 241 | 8.7E-8 |
CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 250 | 406 | 5.70956E-60 |
Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 249 | 405 | 1.4E-46 |
Pfam | PF00672 | HAMP domain | IPR003660 | HAMP domain | 181 | 232 | 5.5E-9 |
MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 413 | 435 | - |
SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 254 | 408 | 1.02E-44 |
MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 413 | 429 | - |
PANTHER | PTHR46663 | DIGUANYLATE CYCLASE DGCT-RELATED | - | - | 117 | 427 | 1.1E-74 |
Coils | Coil | Coil | - | - | 217 | 244 | - |
Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 254 | 413 | 4.6E-55 |
FunFam | G3DSA:3.30.70.270:FF:000090 | Diguanylate cyclase TpbB | - | - | 254 | 413 | 2.5E-106 |
SMART | SM00304 | HAMP_11 | IPR003660 | HAMP domain | 183 | 236 | 9.6E-8 |
NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 245 | 408 | 3.7E-44 |
CDD | cd06225 | HAMP | - | - | 186 | 231 | 4.22773E-5 |