Pseudomonas aeruginosa PAO1, PA1122

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0042586 peptide deformylase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10458
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01576 Peptide deformylase signature IPR023635 Peptide deformylase 35 64 1.2E-18
FunFam G3DSA:3.90.45.10:FF:000003 Peptide deformylase - - 2 142 1.7E-44
PRINTS PR01576 Peptide deformylase signature IPR023635 Peptide deformylase 99 110 1.2E-18
CDD cd00487 Pep_deformylase IPR023635 Peptide deformylase 5 125 3.0002E-49
PANTHER PTHR10458 PEPTIDE DEFORMYLASE IPR023635 Peptide deformylase 3 135 3.8E-28
MobiDBLite mobidb-lite consensus disorder prediction - - 123 147 -
MobiDBLite mobidb-lite consensus disorder prediction - - 121 147 -
SUPERFAMILY SSF56420 Peptide deformylase IPR036821 Peptide deformylase superfamily 1 129 6.02E-41
Gene3D G3DSA:3.90.45.10 Peptide deformylase IPR036821 Peptide deformylase superfamily 1 141 2.3E-41
Pfam PF01327 Polypeptide deformylase IPR023635 Peptide deformylase 3 135 1.3E-34
PRINTS PR01576 Peptide deformylase signature IPR023635 Peptide deformylase 111 129 1.2E-18
PIRSF PIRSF004749 Pep_def IPR023635 Peptide deformylase 1 142 8.8E-34

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.