Pseudomonas aeruginosa PAO1, PA1154

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006313 transposition, DNA-mediated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01321
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01321
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004803 transposase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01321
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.30.70.1290:FF:000001 REP-associated tyrosine transposase - - 1 177 1.2E-82
Gene3D G3DSA:3.30.70.1290 - IPR036515 Transposase IS200-like superfamily 1 177 1.4E-48
SMART SM01321 Y1_Tnp_2 IPR002686 Transposase IS200-like 9 132 6.8E-40
PANTHER PTHR36966 REP-ASSOCIATED TYROSINE TRANSPOSASE - - 3 155 2.0E-47
Pfam PF01797 Transposase IS200 like IPR002686 Transposase IS200-like 13 130 3.7E-9
SUPERFAMILY SSF143422 Transposase IS200-like IPR036515 Transposase IS200-like superfamily 1 138 9.55E-36

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.