Pseudomonas aeruginosa PAO1, PA1435

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Coils Coil Coil - - 111 138 -
SUPERFAMILY SSF111369 HlyD-like secretion proteins - - 62 298 3.92E-53
Gene3D G3DSA:2.40.30.170 - - - 64 281 6.3E-62
Gene3D G3DSA:2.40.420.20 - - - 282 371 1.2E-15
PANTHER PTHR30469 MULTIDRUG RESISTANCE PROTEIN MDTA - - 9 374 1.1E-91
FunFam G3DSA:1.10.287.470:FF:000044 Probable RND efflux membrane fusion protein - - 105 178 1.1E-45
Gene3D G3DSA:1.10.287.470 Helix hairpin bin - - 105 178 6.3E-62
NCBIfam TIGR01730 JCVI: efflux RND transporter periplasmic adaptor subunit IPR006143 RND efflux pump, membrane fusion protein 46 370 1.2E-72
FunFam G3DSA:2.40.420.20:FF:000020 Probable RND efflux membrane fusion protein - - 282 371 9.2E-58
Gene3D G3DSA:2.40.50.100 - - - 70 214 6.3E-62
Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain 70 291 8.2E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.