Pseudomonas aeruginosa PAO1, PA1512 (hcpA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: TGCGCAACTTTTTGC-N9-GCAAAAAGTTGCGCA | 1644885 | 1644923 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GCAACTTTTTG-N83-CAAAAAGTTGC | 1644888 | 1644992 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CCAAAAGCCCTCT-N4-AGAGGGCTTTTGG | 1645113 | 1645142 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 371 | 1644884 | 1644924 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GCGCCTGGAG-N48-CTCCAGGCGC | 1643662 | 1643729 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Shine-Dalgarno sequence | 1644033 | 1644036 | - |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |