Pseudomonas aeruginosa PAO1, PA1659 (hsiF2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Operons

Operon name: H2-T6SS gene cluster (16 gene members)
Locus Tag Gene Name Description Start End Strand Type
PA1656 hsiA2 HsiA2 1803626 1805182 + CDS
Gene Details
PA1657 hsiB2 HsiB2 1805218 1805724 + CDS
Gene Details
PA1658 hsiC2 HsiC2 1805753 1807228 + CDS
Gene Details
PA1659 hsiF2 HsiF2 1807241 1807648 + CDS
Gene Details
PA1660 hsiG2 HsiG2 1808193 1809773 + CDS
Gene Details
PA1661 hsiH2 HsiH2 1809737 1810744 + CDS
Gene Details
PA1662 clpV2 clpV2 1810751 1813384 + CDS
Gene Details
PA1663 sfa2 Sfa2 1813395 1814906 + CDS
Gene Details
PA1664 orfX OrfX 1814995 1815135 + CDS
Gene Details
PA1665 fha2 Fha2 1815153 1816346 + CDS
Gene Details
PA1666 lip2 Lip2 1816352 1816858 + CDS
Gene Details
PA1667 hsiJ2 HsiJ2 1816855 1818186 + CDS
Gene Details
PA1668 dotU2 DotU2 1818189 1819058 + CDS
Gene Details
PA1669 icmF2 IcmF2 1819074 1822601 + CDS
Gene Details
PA1670 stp1 Stp1 1822601 1823329 + CDS
Gene Details
PA1671 stk1 Stk1 1823326 1824315 + CDS
Gene Details
Evidence
A transcription unit is inferred from author statement. In this case, there is often a set of adjacent genes, encoded in the same direction, coding for products that participate in the same metabolic pathway or biological process.
References
The second type VI secretion system of Pseudomonas aeruginosa strain PAO1 is regulated by quorum sensing and Fur and modulates internalization in epithelial cells.
Sana TG, Hachani A, Bucior I, Soscia C, Garvis S, Termine E, Engel J, Filloux A, Bleves S
J Biol Chem 2012 Aug 3;287(32):27095-105
PubMed ID: 22665491
Cross-References
PseudoCAP: 41786
Operon name: PA1656-PA1657-PA1658-PA1659 (4 gene members)
Locus Tag Gene Name Description Start End Strand Type
PA1656 hsiA2 HsiA2 1803626 1805182 + CDS
Gene Details
PA1657 hsiB2 HsiB2 1805218 1805724 + CDS
Gene Details
PA1658 hsiC2 HsiC2 1805753 1807228 + CDS
Gene Details
PA1659 hsiF2 HsiF2 1807241 1807648 + CDS
Gene Details
Evidence
Computationally-predicted.
References
DOOR: a database for prokaryotic operons.
Mao F, Dam P, Chou J, Olman V, Xu Y
Nucleic Acids Res. 2009 Jan;37(Database issue):D459-63
PubMed ID: 18988623
Cross-References
DOOR: 13456