Pseudomonas aeruginosa PAO1, PA2263
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Rho-independent transcription terminator TERM 552 | 2493049 | 2493084 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| PtxS binding site | 2493123 | 2493136 | + |
ECO:0000314
direct assay evidence used in manual assertion |
10464217 | Details |
| PtxR binding site | 2493072 | 2493081 | + |
ECO:0000314
direct assay evidence used in manual assertion |
11133942 | Details |
| Inverted repeat: CGCGCCGGGC-N4-GCCCGGCGCG | 2493055 | 2493078 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 552 | 2493049 | 2493084 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 553 | 2493052 | 2493081 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Shine-Dalgarno sequence | 2493206 | 2493209 | + |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |