Pseudomonas aeruginosa PAO1, PA2320 (gntR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0010906 regulation of glucose metabolic process
IMP
Inferred from Mutant Phenotype 		ECO:0000315
mutant phenotype evidence used in manual assertion		 28752954 Reviewed by curator
Molecular Function GO:0003700 DNA-binding transcription factor activity
IDA
Inferred from Direct Assay 		ECO:0001807
28752954 Reviewed by curator
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd01392
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd01392
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:1.10.260.40:FF:000060 LacI family DNA-binding transcriptional regulator - - 8 72 2.9E-42
Gene3D G3DSA:3.40.50.2300 - - - 78 324 1.9E-66
PANTHER PTHR30146 LACI-RELATED TRANSCRIPTIONAL REPRESSOR - - 16 343 3.3E-80
Pfam PF13377 Periplasmic binding protein-like domain IPR046335 Transcriptional regulator LacI/GalR-like, sensor domain 182 343 1.5E-29
Gene3D G3DSA:3.40.50.2300 - - - 172 304 1.9E-66
CDD cd01392 HTH_LacI IPR000843 LacI-type HTH domain 20 70 1.04667E-17
CDD cd01575 PBP1_GntR - - 76 342 2.24856E-117
Pfam PF00356 Bacterial regulatory proteins, lacI family IPR000843 LacI-type HTH domain 17 62 2.5E-13
SMART SM00354 laci3 IPR000843 LacI-type HTH domain 15 85 2.1E-21
SUPERFAMILY SSF53822 Periplasmic binding protein-like I IPR028082 Periplasmic binding protein-like I 72 327 1.16E-52
SUPERFAMILY SSF47413 lambda repressor-like DNA-binding domains IPR010982 Lambda repressor-like, DNA-binding domain superfamily 15 73 5.06E-15
Gene3D G3DSA:1.10.260.40 - IPR010982 Lambda repressor-like, DNA-binding domain superfamily 8 72 7.1E-20

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.