Pseudomonas aeruginosa PAO1, PA2389 (pvdR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0015562 efflux transmembrane transporter activity
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 19906986 Reviewed by curator
Molecular Function GO:0015562 efflux transmembrane transporter activity
IMP
Inferred from Mutant Phenotype 		ECO:0000315
mutant phenotype evidence used in manual assertion		 22187978 Reviewed by curator
Molecular Function GO:0015562 efflux transmembrane transporter activity
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 21035449 Reviewed by curator
Biological Process GO:0002049 pyoverdine biosynthetic process
IMP
Inferred from Mutant Phenotype 		ECO:0000315
mutant phenotype evidence used in manual assertion		 12686626 Reviewed by curator
Cellular Component GO:1990281 efflux pump complex
IMP
Inferred from Mutant Phenotype 		ECO:0000315
mutant phenotype evidence used in manual assertion		 23766114 Reviewed by curator
Molecular Function GO:0015562 efflux transmembrane transporter activity
IMP
Inferred from Mutant Phenotype 		ECO:0000315
mutant phenotype evidence used in manual assertion		 19906986 Reviewed by curator
Cellular Component GO:1990281 efflux pump complex
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 19906986 Reviewed by curator
Molecular Function GO:0015562 efflux transmembrane transporter activity
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 22187978 Reviewed by curator
Cellular Component GO:1990281 efflux pump complex
IMP
Inferred from Mutant Phenotype 		ECO:0000315
mutant phenotype evidence used in manual assertion		 22187978 Reviewed by curator
Cellular Component GO:1990281 efflux pump complex
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 21035449 Reviewed by curator
Molecular Function GO:0015562 efflux transmembrane transporter activity
IMP
Inferred from Mutant Phenotype 		ECO:0000315
mutant phenotype evidence used in manual assertion		 23766114 Reviewed by curator
Cellular Component GO:1990281 efflux pump complex
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 22187978 Reviewed by curator
Cellular Component GO:1990281 efflux pump complex
IMP
Inferred from Mutant Phenotype 		ECO:0000315
mutant phenotype evidence used in manual assertion		 19906986 Reviewed by curator
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:1990961 xenobiotic detoxification by transmembrane export across the plasma membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:6.10.140.1990
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:1990195 macrolide transmembrane transporter complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:6.10.140.1990
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0019898 extrinsic component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:6.10.140.1990
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:6.10.140.1990 - IPR030190 Macrolide export protein MacA, alpha-hairpin domain superfamily 95 182 2.3E-14
NCBIfam TIGR01730 JCVI: efflux RND transporter periplasmic adaptor subunit IPR006143 RND efflux pump, membrane fusion protein 38 264 1.5E-38
Gene3D G3DSA:2.40.30.170 - - - 218 318 2.3E-28
MobiDBLite mobidb-lite consensus disorder prediction - - 263 289 -
PANTHER PTHR30469 MULTIDRUG RESISTANCE PROTEIN MDTA - - 4 388 4.9E-94
Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain 47 265 3.7E-20
MobiDBLite mobidb-lite consensus disorder prediction - - 272 289 -
Gene3D G3DSA:2.40.50.100 - - - 61 217 1.7E-19
Gene3D G3DSA:2.40.420.20 - - - 319 385 1.6E-10
SUPERFAMILY SSF111369 HlyD-like secretion proteins - - 51 252 1.44E-24
Coils Coil Coil - - 108 135 -
Coils Coil Coil - - 146 180 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.