Pseudomonas aeruginosa PAO1, PA2402 (pvdI)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0002049 pyoverdine biosynthetic process
IMP
Inferred from Mutant Phenotype 		ECO:0000315
mutant phenotype evidence used in manual assertion		 10981704 Reviewed by curator
Molecular Function GO:0031177 phosphopantetheine binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00823
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00668
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Putative enzymes Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.559.30 Nonribosomal peptide synthetase, condensation domain - - 1255 1522 4.4E-84
SUPERFAMILY SSF52777 CoA-dependent acyltransferases - - 1100 1264 2.0E-38
Gene3D G3DSA:2.30.38.10 Luciferase; Domain 3 - - 826 903 4.6E-34
FunFam G3DSA:1.10.1200.10:FF:000005 Nonribosomal peptide synthetase 1 - - 5051 5128 1.2E-24
Gene3D G3DSA:1.10.1200.10 - IPR036736 ACP-like superfamily 3534 3611 1.8E-24
SUPERFAMILY SSF52777 CoA-dependent acyltransferases - - 1546 1733 5.23E-41
Gene3D G3DSA:1.10.1200.10 - IPR036736 ACP-like superfamily 1006 1085 7.0E-26
Gene3D G3DSA:3.30.559.10 - IPR023213 Chloramphenicol acetyltransferase-like domain superfamily 1555 1906 3.3E-116
Pfam PF00501 AMP-binding enzyme IPR000873 AMP-dependent synthetase/ligase domain 517 913 1.6E-101
Coils Coil Coil - - 3659 3679 -
Gene3D G3DSA:3.30.559.30 Nonribosomal peptide synthetase, condensation domain - - 4263 4518 0.0
Pfam PF00501 AMP-binding enzyme IPR000873 AMP-dependent synthetase/ligase domain 4544 4944 1.8E-85
FunFam G3DSA:2.30.38.10:FF:000001 Non-ribosomal peptide synthetase PvdI - - 827 903 4.2E-32
CDD cd05930 A_NRPS - - 3052 3525 0.0
Gene3D G3DSA:3.40.50.980 - - - 2016 2150 2.1E-90
FunFam G3DSA:3.30.300.30:FF:000010 Enterobactin synthetase component F - - 907 1006 3.0E-34
Pfam PF00550 Phosphopantetheine attachment site IPR009081 Phosphopantetheine binding ACP domain 5061 5123 2.8E-13
SUPERFAMILY SSF52777 CoA-dependent acyltransferases - - 4262 4512 1.33E-57
FunFam G3DSA:2.30.38.10:FF:000001 Non-ribosomal peptide synthetase PvdI - - 3354 3430 9.9E-32
FunFam G3DSA:3.40.50.980:FF:000002 Enterobactin synthetase component F - - 673 825 8.2E-48
Gene3D G3DSA:2.30.38.10 Luciferase; Domain 3 - - 3353 3430 1.2E-33
Pfam PF00668 Condensation domain IPR001242 Condensation domain 4084 4518 7.6E-88
Pfam PF13193 AMP-binding enzyme C-terminal domain IPR025110 AMP-binding enzyme, C-terminal domain 2397 2473 2.4E-12
Gene3D G3DSA:3.40.50.980 - - - 1998 2302 2.1E-90
Gene3D G3DSA:3.40.50.1820 alpha/beta hydrolase IPR029058 Alpha/Beta hydrolase fold 5050 5145 1.5E-26
Gene3D G3DSA:3.30.559.10 - IPR023213 Chloramphenicol acetyltransferase-like domain superfamily 1086 1253 1.0E-44
CDD cd19531 LCL_NRPS-like - - 52 478 0.0
FunFam G3DSA:3.40.50.980:FF:000001 Non-ribosomal peptide synthetase - - 4565 4700 5.3E-46
Pfam PF13193 AMP-binding enzyme C-terminal domain IPR025110 AMP-binding enzyme, C-terminal domain 4952 5034 1.6E-14
SMART SM00823 Phosphopantetheine attachment site IPR020806 Polyketide synthase, phosphopantetheine-binding domain 5060 5129 7.3E-4
SUPERFAMILY SSF56801 Acetyl-CoA synthetase-like - - 4501 5073 0.0
Pfam PF13193 AMP-binding enzyme C-terminal domain IPR025110 AMP-binding enzyme, C-terminal domain 921 992 2.0E-12
NCBIfam TIGR01733 JCVI: amino acid adenylation domain IPR010071 Amino acid adenylation domain 4564 4968 4.0E-122
CDD cd19531 LCL_NRPS-like - - 2583 3005 0.0
FunFam G3DSA:3.30.559.30:FF:000001 Non-ribosomal peptide synthetase - - 2763 3007 2.4E-79
SUPERFAMILY SSF47336 ACP-like IPR036736 ACP-like superfamily 3537 3606 1.22E-17
FunFam G3DSA:1.10.1200.10:FF:000005 Nonribosomal peptide synthetase 1 - - 3535 3610 2.9E-24
Gene3D G3DSA:3.30.559.10 - IPR023213 Chloramphenicol acetyltransferase-like domain superfamily 2585 2953 0.0
SUPERFAMILY SSF56801 Acetyl-CoA synthetase-like - - 3001 3557 0.0
Gene3D G3DSA:1.10.1200.10 - IPR036736 ACP-like superfamily 2487 2571 2.1E-24
SUPERFAMILY SSF52777 CoA-dependent acyltransferases - - 2586 2759 2.45E-52
SUPERFAMILY SSF52777 CoA-dependent acyltransferases - - 2767 3031 2.37E-64
SUPERFAMILY SSF52777 CoA-dependent acyltransferases - - 4090 4261 2.33E-40
FunFam G3DSA:3.30.559.10:FF:000012 Non-ribosomal peptide synthetase - - 52 247 2.4E-66
SUPERFAMILY SSF52777 CoA-dependent acyltransferases - - 3618 3817 5.23E-42
CDD cd17649 A_NRPS_PvdJ-like - - 2002 2480 0.0
Pfam PF00550 Phosphopantetheine attachment site IPR009081 Phosphopantetheine binding ACP domain 1020 1079 8.4E-15
SUPERFAMILY SSF47336 ACP-like IPR036736 ACP-like superfamily 5052 5123 1.83E-19
Gene3D G3DSA:3.30.300.30 - IPR045851 AMP-binding enzyme, C-terminal domain superfamily 3433 3533 1.0E-32
Gene3D G3DSA:3.40.50.980 - - - 4565 4700 1.6E-92
CDD cd19543 DCL_NRPS - - 4087 4504 0.0
SUPERFAMILY SSF47336 ACP-like IPR036736 ACP-like superfamily 2493 2564 3.53E-17
SMART SM00823 Phosphopantetheine attachment site IPR020806 Polyketide synthase, phosphopantetheine-binding domain 2499 2568 4.5E-4
Pfam PF13193 AMP-binding enzyme C-terminal domain IPR025110 AMP-binding enzyme, C-terminal domain 3448 3519 6.3E-12
Gene3D G3DSA:3.30.559.30 Nonribosomal peptide synthetase, condensation domain - - 233 480 0.0
Pfam PF00668 Condensation domain IPR001242 Condensation domain 52 497 3.2E-107
Gene3D G3DSA:3.30.559.10 - IPR023213 Chloramphenicol acetyltransferase-like domain superfamily 3612 3787 1.2E-45
SMART SM00823 Phosphopantetheine attachment site IPR020806 Polyketide synthase, phosphopantetheine-binding domain 3544 3612 0.0047
Pfam PF00668 Condensation domain IPR001242 Condensation domain 1096 1528 2.0E-76
FunFam G3DSA:2.30.38.10:FF:000001 Non-ribosomal peptide synthetase PvdI - - 4857 4934 2.2E-32
SUPERFAMILY SSF56801 Acetyl-CoA synthetase-like - - 474 1031 0.0
FunFam G3DSA:3.40.50.980:FF:000002 Enterobactin synthetase component F - - 3200 3352 2.3E-47
SUPERFAMILY SSF52777 CoA-dependent acyltransferases - - 3803 4051 1.33E-45
Gene3D G3DSA:3.30.559.10 - IPR023213 Chloramphenicol acetyltransferase-like domain superfamily 4090 4454 0.0
FunFam G3DSA:1.10.1200.10:FF:000016 Non-ribosomal peptide synthase - - 2487 2571 1.8E-22
NCBIfam TIGR01733 JCVI: amino acid adenylation domain IPR010071 Amino acid adenylation domain 2015 2413 3.6E-125
CDD cd17649 A_NRPS_PvdJ-like - - 4551 5041 0.0
SUPERFAMILY SSF52777 CoA-dependent acyltransferases - - 235 504 1.33E-62
Gene3D G3DSA:3.30.559.10 - IPR023213 Chloramphenicol acetyltransferase-like domain superfamily 52 426 0.0
Gene3D G3DSA:3.30.300.30 - IPR045851 AMP-binding enzyme, C-terminal domain superfamily 4938 5049 1.6E-37
Pfam PF00668 Condensation domain IPR001242 Condensation domain 2583 3024 3.1E-108
Pfam PF00550 Phosphopantetheine attachment site IPR009081 Phosphopantetheine binding ACP domain 2501 2562 1.2E-11
SUPERFAMILY SSF56801 Acetyl-CoA synthetase-like - - 1953 2512 0.0
CDD cd19534 E_NRPS - - 1097 1516 0.0
SUPERFAMILY SSF47336 ACP-like IPR036736 ACP-like superfamily 1010 1079 3.53E-19
CDD cd19543 DCL_NRPS - - 1552 1956 0.0
FunFam G3DSA:1.10.1200.10:FF:000005 Nonribosomal peptide synthetase 1 - - 1009 1084 1.7E-25
Gene3D G3DSA:3.30.300.30 - IPR045851 AMP-binding enzyme, C-terminal domain superfamily 2383 2486 7.0E-33
Coils Coil Coil - - 1139 1159 -
FunFam G3DSA:3.40.50.980:FF:000001 Non-ribosomal peptide synthetase - - 3066 3199 1.0E-45
NCBIfam TIGR01720 JCVI: non-ribosomal peptide synthase domain TIGR01720 IPR010060 Non-ribosomal peptide synthase 3923 4077 9.4E-45
Gene3D G3DSA:3.30.559.30 Nonribosomal peptide synthetase, condensation domain - - 1720 1971 3.3E-116
SUPERFAMILY SSF52777 CoA-dependent acyltransferases - - 52 229 2.45E-53
Gene3D G3DSA:3.30.559.30 Nonribosomal peptide synthetase, condensation domain - - 2763 3007 0.0
SUPERFAMILY SSF52777 CoA-dependent acyltransferases - - 1720 1958 3.45E-55
FunFam G3DSA:3.30.300.30:FF:000015 Nonribosomal peptide synthase SidD - - 2383 2490 5.2E-14
Pfam PF00668 Condensation domain IPR001242 Condensation domain 1550 1973 4.8E-79
NCBIfam TIGR01733 JCVI: amino acid adenylation domain IPR010071 Amino acid adenylation domain 3066 3464 0.0
FunFam G3DSA:3.40.50.980:FF:000001 Non-ribosomal peptide synthetase - - 2016 2150 3.4E-42
CDD cd19534 E_NRPS - - 3624 4051 0.0
SUPERFAMILY SSF52777 CoA-dependent acyltransferases - - 1271 1517 3.11E-45
Gene3D G3DSA:3.40.50.980 - - - 539 673 2.0E-112
FunFam G3DSA:3.40.50.980:FF:000001 Non-ribosomal peptide synthetase - - 539 672 4.4E-46
Gene3D G3DSA:3.30.300.30 - IPR045851 AMP-binding enzyme, C-terminal domain superfamily 906 1005 9.0E-33
Gene3D G3DSA:3.40.50.980 - - - 3048 3352 2.8E-111
Gene3D G3DSA:2.30.38.10 Luciferase; Domain 3 - - 2307 2382 3.0E-29
Pfam PF00501 AMP-binding enzyme IPR000873 AMP-dependent synthetase/ligase domain 1994 2389 2.7E-86
Gene3D G3DSA:3.30.559.30 Nonribosomal peptide synthetase, condensation domain - - 3788 4057 6.2E-85
Gene3D G3DSA:2.30.38.10 Luciferase; Domain 3 - - 4861 4937 4.8E-28
Gene3D G3DSA:3.40.50.980 - - - 4547 4856 1.6E-92
CDD cd17646 A_NRPS_AB3403-like - - 514 998 0.0
Pfam PF00501 AMP-binding enzyme IPR000873 AMP-dependent synthetase/ligase domain 3044 3440 3.1E-100
Gene3D G3DSA:3.40.50.980 - - - 3066 3200 2.8E-111
FunFam G3DSA:3.30.300.30:FF:000010 Enterobactin synthetase component F - - 4938 5048 1.3E-36
PANTHER PTHR45398 - - - 4533 5135 0.0
FunFam G3DSA:3.30.300.30:FF:000010 Enterobactin synthetase component F - - 3434 3533 1.3E-33
Pfam PF00550 Phosphopantetheine attachment site IPR009081 Phosphopantetheine binding ACP domain 3546 3606 1.4E-12
SMART SM00823 Phosphopantetheine attachment site IPR020806 Polyketide synthase, phosphopantetheine-binding domain 1018 1086 0.0013
NCBIfam TIGR01733 JCVI: amino acid adenylation domain IPR010071 Amino acid adenylation domain 539 937 0.0
Gene3D G3DSA:3.40.50.980 - - - 521 825 2.0E-112
FunFam G3DSA:3.30.559.10:FF:000012 Non-ribosomal peptide synthetase - - 2586 2777 1.0E-60
Pfam PF00668 Condensation domain IPR001242 Condensation domain 3623 4051 5.0E-75
NCBIfam TIGR01720 JCVI: non-ribosomal peptide synthase domain TIGR01720 IPR010060 Non-ribosomal peptide synthase 1388 1542 5.3E-51

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.