Pseudomonas aeruginosa PAO1, PA2407 (fpvC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0043190 ATP-binding cassette (ABC) transporter complex
IGI
Inferred from Genetic Interaction
ECO:0000011
genetic interaction evidence
28975384 Reviewed by curator
Biological Process GO:0030001 metal ion transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01297
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007155 cell adhesion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00691
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0046872 metal ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01297
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class
Motility & Attachment Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Coils Coil Coil - - 174 194 -
PRINTS PR00690 Adhesin family signature IPR006128 Adhesion lipoprotein 86 103 7.5E-9
PANTHER PTHR42953 HIGH-AFFINITY ZINC UPTAKE SYSTEM PROTEIN ZNUA-RELATED - - 22 314 1.8E-72
CDD cd01017 AdcA - - 40 313 7.95185E-120
PRINTS PR00691 Adhesin B signature IPR006129 Adhesin B 86 105 4.7E-10
PRINTS PR00690 Adhesin family signature IPR006128 Adhesion lipoprotein 255 273 7.5E-9
Gene3D G3DSA:3.40.50.1980 Nitrogenase molybdenum iron protein domain - - 41 194 1.2E-37
PRINTS PR00690 Adhesin family signature IPR006128 Adhesion lipoprotein 202 223 7.5E-9
SUPERFAMILY SSF53807 Helical backbone metal receptor - - 41 313 9.81E-68
PRINTS PR00690 Adhesin family signature IPR006128 Adhesion lipoprotein 73 86 7.5E-9
PRINTS PR00691 Adhesin B signature IPR006129 Adhesin B 144 163 4.7E-10
Pfam PF01297 Zinc-uptake complex component A periplasmic IPR006127 Periplasmic solute binding protein, ZnuA-like 48 310 6.6E-53
PRINTS PR00691 Adhesin B signature IPR006129 Adhesin B 67 85 4.7E-10
Gene3D G3DSA:3.40.50.1980 Nitrogenase molybdenum iron protein domain - - 195 313 2.9E-22
PRINTS PR00691 Adhesin B signature IPR006129 Adhesin B 202 219 4.7E-10
PRINTS PR00691 Adhesin B signature IPR006129 Adhesin B 42 63 4.7E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.