Pseudomonas aeruginosa PAO1, PA2685 (vgrG4)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0033104 type VI protein secretion system complex
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
21325275 Reviewed by curator
Biological Process GO:0033103 protein secretion by the type VI secretion system
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
20114026 Reviewed by curator
Biological Process GO:0033103 protein secretion by the type VI secretion system
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
21325275 Reviewed by curator
Cellular Component GO:0033104 type VI protein secretion system complex
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
20114026 Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Hcp secretion island I (HSI-I) type VI secretion system ECO:0000037
not_recorded
KEGG pae03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF69255 gp5 N-terminal domain-like - - 402 489 3.92E-35
Gene3D G3DSA:2.40.50.230 - IPR037026 Vgr protein, OB-fold domain superfamily 392 494 5.1E-46
SUPERFAMILY SSF69279 Phage tail proteins - - 229 400 6.29E-35
Gene3D G3DSA:4.10.220.110 - - - 261 323 0.0
FunFam G3DSA:3.55.50.10:FF:000001 Actin cross-linking toxin VgrG1 - - 135 226 1.3E-44
FunFam G3DSA:2.40.50.230:FF:000001 Type VI secretion protein VgrG - - 392 494 9.4E-62
Pfam PF06715 Gp5 C-terminal repeat (3 copies) IPR010609 Gp5, C-terminal 566 589 5.7E-5
FunFam G3DSA:4.10.220.110:FF:000001 VgrG1 - - 261 323 6.0E-31
Pfam PF05954 Phage tail baseplate hub (GPD) - - 66 366 9.5E-103
MobiDBLite mobidb-lite consensus disorder prediction - - 502 522 -
Pfam PF04717 Type VI secretion system/phage-baseplate injector OB domain IPR006531 Gp5/Type VI secretion system Vgr protein, OB-fold domain 423 490 1.5E-14
Gene3D G3DSA:3.55.50.10 - - - 135 226 0.0
MobiDBLite mobidb-lite consensus disorder prediction - - 502 520 -
SUPERFAMILY SSF69349 Phage fibre proteins - - 479 697 1.26E-55
NCBIfam TIGR01646 JCVI: type VI secretion system tip protein VgrG IPR006533 Type VI secretion system, RhsGE-associated Vgr protein 59 543 0.0
Gene3D G3DSA:2.30.110.50 - - - 52 370 0.0
PANTHER PTHR32305 - - - 42 638 3.9E-94
SUPERFAMILY SSF69279 Phage tail proteins - - 48 221 1.06E-62
NCBIfam TIGR03361 JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset 48 561 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.