Pseudomonas aeruginosa PAO1, PA3141 (wbpM)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
IDA
Inferred from Direct Assay 		ECO:0000002
direct assay evidence
Biological Process GO:0006045 N-acetylglucosamine biosynthetic process
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 11580835 Reviewed by curator
Molecular Function GO:0003824 catalytic activity
IDA
Inferred from Direct Assay 		ECO:0000002
direct assay evidence
Biological Process GO:0009243 O antigen biosynthetic process
IMP
Inferred from Mutant Phenotype 		ECO:0000315
mutant phenotype evidence used in manual assertion		 10639466 Reviewed by curator
Cellular Component GO:0009276 Gram-negative-bacterium-type cell wall
IDA
Inferred from Direct Assay 		ECO:0000002
direct assay evidence
Biological Process GO:0009103 lipopolysaccharide biosynthetic process
IDA
Inferred from Direct Assay 		ECO:0000002
direct assay evidence
Molecular Function GO:0008757 S-adenosylmethionine-dependent methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF53335
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other PAO1 genes in this class
Putative enzymes Other PAO1 genes in this class
Membrane proteins Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Lipopolysaccharide biosynthesis ECO:0000037
not_recorded
PseudoCyc PWY-7333 UDP-N-acetyl-alpha-D-fucosamine biosynthesis 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR43318 UDP-N-ACETYLGLUCOSAMINE 4,6-DEHYDRATASE - - 16 653 0.0
Pfam PF13727 CoA-binding domain - - 71 256 1.0E-5
FunFam G3DSA:3.40.50.720:FF:000568 Polysaccharide biosynthesis protein - - 296 640 0.0
Gene3D G3DSA:3.40.50.720 - - - 162 282 5.0E-31
SUPERFAMILY SSF53335 S-adenosyl-L-methionine-dependent methyltransferases IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily 159 345 7.47E-17
Gene3D G3DSA:3.40.50.720 - - - 297 646 2.7E-117
CDD cd05237 UDP_invert_4-6DH_SDR_e IPR003869 Polysaccharide biosynthesis protein, CapD-like domain 298 607 0.0
Pfam PF02719 Polysaccharide biosynthesis protein IPR003869 Polysaccharide biosynthesis protein, CapD-like domain 301 608 3.7E-128
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 299 587 8.32E-51

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.