Pseudomonas aeruginosa PAO1, PA3364 (amiC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0051346 negative regulation of hydrolase activity
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
10893220 Reviewed by curator
Biological Process GO:0034251 regulation of cellular amide catabolic process
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
7813419 Reviewed by curator
Molecular Function GO:0033218 amide binding
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
8253087 Reviewed by curator
Biological Process GO:0006355 regulation of transcription, DNA-templated
IDA
Inferred from Direct Assay
ECO:0000002
direct assay evidence
Molecular Function GO:0033218 amide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd06357
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006865 amino acid transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00337
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02024 Quorum sensing 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd06357 PBP1_AmiC IPR039570 AmiC, periplasmic binding domain 10 366 0.0
Gene3D G3DSA:3.40.50.2300 - - - 123 353 0.0
SUPERFAMILY SSF53822 Periplasmic binding protein-like I IPR028082 Periplasmic binding protein-like I 10 375 3.36E-88
PANTHER PTHR47628 - - - 3 379 0.0
PRINTS PR00337 Leu/Ile/Val-binding protein family signature IPR000709 Leu/Ile/Val-binding protein 30 46 6.7E-8
PRINTS PR00337 Leu/Ile/Val-binding protein family signature IPR000709 Leu/Ile/Val-binding protein 237 255 6.7E-8
Gene3D G3DSA:3.40.50.2300 - - - 11 338 0.0
PRINTS PR00337 Leu/Ile/Val-binding protein family signature IPR000709 Leu/Ile/Val-binding protein 71 81 6.7E-8
Pfam PF13433 Periplasmic binding protein domain - - 10 370 1.5E-115

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.