Pseudomonas aeruginosa PAO1, PA3383

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006810 transport
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Biological Process GO:0015716 organic phosphonate transport
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Biological Process GO:0015716 organic phosphonate transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03431
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0043190 ATP-binding cassette (ABC) transporter complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01098
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01098
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Phosphonate utilization ECO:0000037
not_recorded
KEGG pae02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR30043 PHOSPHONATES TRANSPORT SYSTEM PERMEASE PROTEIN - - 3 334 3.3E-63
CDD cd13575 PBP2_PnhD - - 25 282 0.0
Coils Coil Coil - - 121 141 -
NCBIfam TIGR03431 JCVI: phosphonate ABC transporter substrate-binding protein IPR017797 Phosphonate ABC transporter, substrate-binding protein 2 289 2.9E-99
Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein - - 32 277 3.0E-71
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 49 243 2.06E-36
Gene3D G3DSA:3.40.190.10 - - - 30 262 1.1E-105
NCBIfam TIGR01098 JCVI: phosphate/phosphite/phosphonate ABC transporter substrate-binding protein IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 7 252 1.8E-81
Coils Coil Coil - - 301 328 -
Gene3D G3DSA:3.40.190.10 - - - 115 227 1.1E-105
Gene3D G3DSA:1.20.58.90 - - - 275 334 4.2E-25

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.