Pseudomonas aeruginosa PAO1, PA3385 (amrZ)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003677	DNA binding	IDA Inferred from Direct Assay	ECO:0000314 direct assay evidence used in manual assertion	16352829	Reviewed by curator
Molecular Function	GO:0000986	bacterial-type cis-regulatory region sequence-specific DNA binding	IDA Inferred from Direct Assay	ECO:0000314 direct assay evidence used in manual assertion	8899712	Reviewed by curator
Biological Process	GO:0044780	bacterial-type flagellum assembly	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	16952938	Reviewed by curator
Biological Process	GO:0009405	pathogenesis	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	20709902	Reviewed by curator
Molecular Function	GO:0000986	bacterial-type cis-regulatory region sequence-specific DNA binding	IDA Inferred from Direct Assay	ECO:0000314 direct assay evidence used in manual assertion	24603766	Reviewed by curator
Biological Process	GO:2000147	positive regulation of cell motility	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	16352829	Reviewed by curator
Molecular Function	GO:0000976	transcription regulatory region sequence-specific DNA binding	IDA Inferred from Direct Assay	ECO:0000314 direct assay evidence used in manual assertion	16952938	Reviewed by curator
Biological Process	GO:0032885	regulation of polysaccharide biosynthetic process	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	10476040	Reviewed by curator
Biological Process	GO:1902201	negative regulation of bacterial-type flagellum-dependent cell motility	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	16952938	Reviewed by curator
Biological Process	GO:0032885	regulation of polysaccharide biosynthetic process	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	23354748	Reviewed by curator
Biological Process	GO:1900233	positive regulation of single-species biofilm formation on inanimate substrate	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	10476040	Reviewed by curator
Biological Process	GO:0043107	type IV pilus-dependent motility	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	16352829	Reviewed by curator
Biological Process	GO:1900232	negative regulation of single-species biofilm formation on inanimate substrate	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	24603766	Reviewed by curator
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF47598	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF03869	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF47598	Ribbon-helix-helix	IPR010985	Ribbon-helix-helix	14	59	1.04E-13
Pfam	PF03869	Arc-like DNA binding domain	IPR005569	Arc-like DNA binding domain	13	62	1.5E-28
Gene3D	G3DSA:1.10.1220.10	-	IPR013321	Arc-type ribbon-helix-helix	1	66	1.2E-32

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.