Pseudomonas aeruginosa PAO1, PA3486 (vgrG4b)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0033103 protein secretion by the type VI secretion system
IGC
Inferred from Genomic Context
21325275 Reviewed by curator
Cellular Component GO:0033104 type VI protein secretion system complex
IGC
Inferred from Genomic Context
21325275 Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF04717 Type VI secretion system/phage-baseplate injector OB domain IPR006531 Gp5/Type VI secretion system Vgr protein, OB-fold domain 393 460 9.9E-15
Gene3D G3DSA:3.55.50.10 - - - 95 188 2.2E-86
FunFam G3DSA:3.55.50.10:FF:000001 Actin cross-linking toxin VgrG1 - - 95 188 1.0E-37
SUPERFAMILY SSF69255 gp5 N-terminal domain-like - - 371 459 8.11E-34
Pfam PF05954 Phage tail baseplate hub (GPD) - - 29 327 7.0E-79
Gene3D G3DSA:2.30.110.50 - - - 18 329 2.2E-86
Gene3D G3DSA:2.40.50.230 - IPR037026 Vgr protein, OB-fold domain superfamily 362 463 8.3E-44
PANTHER PTHR32305 - - - 68 607 3.0E-86
Gene3D G3DSA:4.10.220.110 - - - 221 284 2.2E-86
NCBIfam TIGR03361 JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset 10 529 0.0
SUPERFAMILY SSF69279 Phage tail proteins - - 191 371 1.11E-41
NCBIfam TIGR01646 JCVI: type VI secretion system tip protein VgrG IPR006533 Type VI secretion system, RhsGE-associated Vgr protein 22 511 2.6E-122
SUPERFAMILY SSF69349 Phage fibre proteins - - 449 631 1.33E-40
SUPERFAMILY SSF69279 Phage tail proteins - - 10 184 3.29E-58

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.