Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA5088
|
Name |
tli5b3
|
Replicon | chromosome |
Genomic location | 5726357 - 5727238 (- strand) |
Transposon Mutants | 3 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_253775.1 |
GI | 15600281 |
Affymetrix | PA5088_at |
Entrez | 882244 |
GenBank | AAG08473.1 |
INSDC | AAG08473.1 |
NCBI Locus Tag | PA5088 |
protein_id(GenBank) | gb|AAG08473.1|AE004921_10|gnl|PseudoCAP|PA5088 |
TIGR | NTL03PA05089 |
UniParc | UPI00000C5EF5 |
UniProtKB Acc | Q9HU95 |
UniProtKB ID | Q9HU95_PSEAE |
UniRef100 | UniRef100_Q9HU95 |
UniRef50 | UniRef50_Q9HU95 |
UniRef90 | UniRef90_Q9HU95 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
type VI secretion lipase immunity protein, Tli5b3
|
Synonyms |
hypothetical protein |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -4.42 |
Kyte-Doolittle Hydrophobicity Value | -0.352 |
Molecular Weight (kDa) | 32.9 |
Isoelectric Point (pI) | 5.90 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
5JJO | IMMUNE SYSTEM | 04/24/16 | The crystal structure of immunity protein PA5088 from Pseudomonas aeruginosa | Pseudomonas aeruginosa PAO1 | 2.002 | X-RAY DIFFRACTION | 99.6 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 79 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004686 (200 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA5088
Search term: tli5b3
Search term: type VI secretion lipase immunity protein, Tli5b3
|
Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
|
The T6SSs of Pseudomonas aeruginosa Strain PAO1 and Their Effectors: Beyond Bacterial-Cell Targeting.
Sana TG, Berni B, Bleves S
Front Cell Infect Microbiol 2016;6:61
PubMed ID: 27376031
|