Pseudomonas aeruginosa UCBPP-PA14, PA14_00110 (tag)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008725 DNA-3-methyladenine glycosylase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00624
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006284 base-excision repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00624
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006281 DNA repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48150
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48150
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

DNA replication, recombination, modification and repair Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau03410 Base excision repair 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR00624 JCVI: DNA-3-methyladenine glycosylase I IPR004597 DNA-3-methyladenine glycosylase I 3 178 7.0E-88
PANTHER PTHR30037 DNA-3-METHYLADENINE GLYCOSYLASE 1 - - 3 180 2.1E-70
FunFam G3DSA:1.10.340.30:FF:000009 DNA-3-methyladenine glycosylase I - - 1 182 1.4E-94
Gene3D G3DSA:1.10.340.30 Hypothetical protein; domain 2 - - 1 181 2.1E-76
SUPERFAMILY SSF48150 DNA-glycosylase IPR011257 DNA glycosylase 1 181 2.2E-75
Pfam PF03352 Methyladenine glycosylase IPR005019 Methyladenine glycosylase 6 177 6.0E-72

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.