Pseudomonas aeruginosa UCBPP-PA14, PA14_02220

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004888 transmembrane signaling receptor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00260
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00283
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00260
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00283
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Chemotaxis Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau02030 Bacterial chemotaxis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd17529 HAMP_I - - 11 55 2.20379E-10
Coils Coil Coil - - 409 429 -
FunFam G3DSA:1.20.120.1530:FF:000009 Aerotaxis transducer Aer2 - - 1 156 6.8E-105
Pfam PF18947 HAMP domain IPR003660 HAMP domain 318 376 1.2E-7
Coils Coil Coil - - 590 617 -
FunFam G3DSA:1.10.287.950:FF:000002 Methyl-accepting chemotaxis protein - - 411 636 9.2E-120
MobiDBLite mobidb-lite consensus disorder prediction - - 644 679 -
PRINTS PR00260 Bacterial chemotaxis sensory transducer signature IPR004090 Chemotaxis methyl-accepting receptor 484 511 4.1E-56
Pfam PF13188 PAS domain IPR000014 PAS domain 173 222 1.8E-5
SUPERFAMILY SSF58104 Methyl-accepting chemotaxis protein (MCP) signaling domain - - 353 634 1.29E-73
PRINTS PR00260 Bacterial chemotaxis sensory transducer signature IPR004090 Chemotaxis methyl-accepting receptor 407 436 4.1E-56
FunFam G3DSA:3.30.450.20:FF:000075 Methyl-accepting chemotaxis protein - - 170 289 2.4E-56
Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain 446 601 3.3E-54
CDD cd17527 HAMP_II - - 66 111 3.53191E-14
Gene3D G3DSA:1.20.120.1530 - - - 1 156 3.0E-41
Gene3D G3DSA:3.30.450.20 PAS domain - - 170 289 1.0E-42
CDD cd11386 MCP_signal - - 413 604 3.77595E-57
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 167 276 7.68E-6
Pfam PF18575 HAMP N-terminal domain 3 IPR041395 HAMP N-terminal domain 3 114 156 4.5E-18
SMART SM00283 MA_2 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain 386 633 1.2E-90
PRINTS PR00260 Bacterial chemotaxis sensory transducer signature IPR004090 Chemotaxis methyl-accepting receptor 561 590 4.1E-56
PRINTS PR00260 Bacterial chemotaxis sensory transducer signature IPR004090 Chemotaxis methyl-accepting receptor 513 542 4.1E-56
PANTHER PTHR43531 PROTEIN ICFG - - 99 662 3.6E-130
Gene3D G3DSA:1.10.287.950 - - - 336 635 3.1E-79
CDD cd17528 HAMP_III - - 112 155 4.33086E-16
Coils Coil Coil - - 41 68 -
MobiDBLite mobidb-lite consensus disorder prediction - - 406 425 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.