Pseudomonas aeruginosa UCBPP-PA14, PA14_02580 (mdcD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016831 carboxy-lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03133
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0005975 carbohydrate metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03133
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Carbon compound catabolism Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF52096 ClpP/crotonase IPR029045 ClpP/crotonase-like domain superfamily 4 236 8.71E-37
Pfam PF01039 Carboxyl transferase domain IPR034733 Acetyl-CoA carboxylase 18 235 1.6E-14
NCBIfam TIGR03133 JCVI: biotin-independent malonate decarboxylase subunit beta IPR017556 Biotin-independent malonate decarboxylase, beta subunit 11 281 1.1E-116
PANTHER PTHR42995 ACETYL-COENZYME A CARBOXYLASE CARBOXYL TRANSFERASE SUBUNIT BETA, CHLOROPLASTIC - - 18 214 3.6E-21
Gene3D G3DSA:3.90.226.10 - - - 3 240 4.1E-47

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.