Pseudomonas aeruginosa UCBPP-PA14, PA14_03130

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016831 carboxy-lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01977
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Biosynthesis of cofactors, prosthetic groups and carriers Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
MetaCyc plastoquinol-9 biosynthesis II InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc ubiquinol-9 biosynthesis (prokaryotic) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pau00130 Ubiquinone and other terpenoid-quinone biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc ubiquinol-8 biosynthesis (prokaryotic) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc ubiquinol-7 biosynthesis (prokaryotic) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc ubiquinol-10 biosynthesis (prokaryotic) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase IPR002830 UbiD decarboxylyase family 12 429 3.4E-115
Hamap MF_01983 UbiD-like decarboxylase. IPR032903 Ferulic acid decarboxylase-like 4 493 51.577583
Gene3D G3DSA:3.40.1670.10 - - - 329 457 2.6E-41
SUPERFAMILY SSF50475 FMN-binding split barrel - - 7 314 3.65E-88
SUPERFAMILY SSF143968 UbiD C-terminal domain-like - - 317 493 8.63E-31
NCBIfam TIGR00148 JCVI: UbiD family decarboxylase IPR002830 UbiD decarboxylyase family 8 455 8.1E-91
PANTHER PTHR30108 3-OCTAPRENYL-4-HYDROXYBENZOATE CARBOXY-LYASE-RELATED IPR002830 UbiD decarboxylyase family 5 494 0.0
Gene3D G3DSA:1.20.5.4570 - - - 458 496 9.1E-20

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.