Pseudomonas aeruginosa UCBPP-PA14, PA14_03220 (vgrG2b)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF69349 442 493 1.8E-9
Gene3D G3DSA:2.30.110.50 188 220 3.3E-79
SUPERFAMILY SSF69255 364 451 2.35E-33
Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IPR018769 Domain of unknown function DUF2345, Vgr C-terminal 615 758 1.4E-47
Gene3D G3DSA:2.30.110.50 285 328 3.3E-79
Gene3D G3DSA:2.30.110.50 21 95 3.3E-79
Gene3D G3DSA:3.55.50.10 96 187 3.3E-79
Gene3D G3DSA:3.30.1920.30 221 284 3.3E-79
TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein IPR006533 Type VI secretion system, RhsGE-associated Vgr protein 19 502 3.5E-120
SUPERFAMILY SSF69279 197 365 1.31E-31
Pfam PF05954 Phage late control gene D protein (GPD) 27 327 4.2E-75
SUPERFAMILY SSF69279 9 182 2.04E-47
MobiDBLite mobidb-lite consensus disorder prediction 274 289 -
TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset 9 493 9.5E-161
Gene3D G3DSA:2.40.50.230 IPR037026 Vgr protein, OB-fold domain superfamily 358 456 4.6E-41
MobiDBLite mobidb-lite consensus disorder prediction 264 289 -
Pfam PF13296 Putative type VI secretion system Rhs element Vgr IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain 475 581 9.2E-34

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.