Pseudomonas aeruginosa UCBPP-PA14, PA14_18610 (argF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016597 amino acid binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00100
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006520 cellular amino acid metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00100
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004585 ornithine carbamoyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01109
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006591 ornithine metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01109
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016743 carboxyl- or carbamoyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00100
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00220 Arginine biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00102 Ornithine carbamoyltransferase signature IPR002292 Ornithine/putrescine carbamoyltransferase 278 289 5.3E-29
PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature IPR006130 Aspartate/ornithine carbamoyltransferase 131 142 5.2E-27
PRINTS PR00102 Ornithine carbamoyltransferase signature IPR002292 Ornithine/putrescine carbamoyltransferase 216 226 5.3E-29
PANTHER PTHR45753 ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL - - 3 300 1.5E-106
PRINTS PR00102 Ornithine carbamoyltransferase signature IPR002292 Ornithine/putrescine carbamoyltransferase 120 134 5.3E-29
Gene3D G3DSA:3.40.50.1370 Aspartate/ornithine carbamoyltransferase IPR036901 Aspartate/ornithine carbamoyltransferase superfamily 4 133 1.2E-117
PRINTS PR00102 Ornithine carbamoyltransferase signature IPR002292 Ornithine/putrescine carbamoyltransferase 80 93 5.3E-29
PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature IPR006130 Aspartate/ornithine carbamoyltransferase 252 261 5.2E-27
SUPERFAMILY SSF53671 Aspartate/ornithine carbamoyltransferase IPR036901 Aspartate/ornithine carbamoyltransferase superfamily 2 300 1.07E-103
PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature IPR006130 Aspartate/ornithine carbamoyltransferase 264 287 5.2E-27
NCBIfam TIGR00658 JCVI: ornithine carbamoyltransferase IPR002292 Ornithine/putrescine carbamoyltransferase 4 299 1.3E-115
FunFam G3DSA:3.40.50.1370:FF:000008 Ornithine carbamoyltransferase - - 134 286 4.4E-60
FunFam G3DSA:3.40.50.1370:FF:000024 Ornithine carbamoyltransferase - - 4 133 5.2E-67
PRINTS PR00102 Ornithine carbamoyltransferase signature IPR002292 Ornithine/putrescine carbamoyltransferase 47 61 5.3E-29
Gene3D G3DSA:3.40.50.1370 Aspartate/ornithine carbamoyltransferase IPR036901 Aspartate/ornithine carbamoyltransferase superfamily 134 295 1.2E-117
Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. IPR024904 Ornithine carbamoyltransferase 3 300 79.575317
Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding 4 144 3.6E-45
Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain 150 297 1.2E-49
PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature IPR006130 Aspartate/ornithine carbamoyltransferase 49 68 5.2E-27

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.