Pseudomonas aeruginosa UCBPP-PA14, PA14_18985 (vgrG4b)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF69279 Phage tail proteins - - 10 184 3.51E-58
SUPERFAMILY SSF69279 Phage tail proteins - - 191 371 1.17E-41
Gene3D G3DSA:2.30.110.50 - - - 18 329 5.0E-87
FunFam G3DSA:3.55.50.10:FF:000001 Actin cross-linking toxin VgrG1 - - 95 188 5.4E-38
NCBIfam TIGR03361 JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset 10 529 0.0
NCBIfam TIGR01646 JCVI: type VI secretion system tip protein VgrG IPR006533 Type VI secretion system, RhsGE-associated Vgr protein 22 511 7.1E-121
SUPERFAMILY SSF69349 Phage fibre proteins - - 449 631 2.2E-40
Gene3D G3DSA:4.10.220.110 - - - 221 284 5.0E-87
PANTHER PTHR32305 - - - 69 607 2.9E-86
Gene3D G3DSA:2.40.50.230 - IPR037026 Vgr protein, OB-fold domain superfamily 362 463 4.8E-43
Pfam PF04717 Type VI secretion system/phage-baseplate injector OB domain IPR006531 Gp5/Type VI secretion system Vgr protein, OB-fold domain 393 460 2.2E-15
Pfam PF05954 Phage tail baseplate hub (GPD) - - 29 327 2.8E-79
SUPERFAMILY SSF69255 gp5 N-terminal domain-like - - 371 459 1.49E-33
Gene3D G3DSA:3.55.50.10 - - - 95 188 5.0E-87

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.