Pseudomonas aeruginosa UCBPP-PA14, PA14_33920

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00038
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 168 184 2.8E-11
Pfam PF00196 Bacterial regulatory proteins, luxR family IPR000792 Transcription regulator LuxR, C-terminal 153 208 3.2E-17
Gene3D G3DSA:3.40.50.2300 - - - 9 213 2.2E-43
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 9 131 4.7E-19
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 154 168 2.8E-11
SUPERFAMILY SSF46894 C-terminal effector domain of the bipartite response regulators IPR016032 Signal transduction response regulator, C-terminal effector 145 212 4.08E-19
PANTHER PTHR45566 HTH-TYPE TRANSCRIPTIONAL REGULATOR YHJB-RELATED - - 8 211 3.6E-51
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 184 196 2.8E-11
SMART SM00421 luxrmega5 IPR000792 Transcription regulator LuxR, C-terminal 151 208 1.2E-21
CDD cd06170 LuxR_C_like IPR000792 Transcription regulator LuxR, C-terminal 154 202 1.81466E-15
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 11 125 3.2E-13
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 9 125 1.3E-12
CDD cd17535 REC_NarL-like - - 11 130 2.83911E-24

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.