Strain |
Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest |
Locus Tag |
PA14_33980
|
Name |
tsd2
Synonym: cytidine deaminase |
Replicon | chromosome |
Genomic location | 3020733 - 3021266 (- strand) |
Transposon Mutants | 1 transposon mutants in UCBPP-PA14 |
Comment | Hcp Secretion Island-III-encoded type VI secretion system (H3-T6SS) |
RefSeq | YP_790871.1 |
GI | 116050312 |
Entrez | 4380433 |
INSDC | ABJ11548.1 |
NCBI Locus Tag | PA14_33980 |
UniParc | UPI0000E44A8A |
UniProtKB Acc | Q02MG5 |
UniProtKB ID | Q02MG5_PSEAB |
UniRef100 | UniRef100_Q02MG5 |
UniRef50 | UniRef50_B7V8V0 |
UniRef90 | UniRef90_B7V8V0 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
Tsd2
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | 3.58 |
Kyte-Doolittle Hydrophobicity Value | -0.049 |
Molecular Weight (kDa) | 18.8 |
Isoelectric Point (pI) | 8.64 |
Individual Mappings | |
Additional evidence for subcellular localization |
Source 1 | |
Database | PseudoCAP |
Category | Hcp secretion island-3 encoded type VI secretion system (H3-T6SS) |
Evidence |
ECO:0000316
genetic interaction evidence used in manual assertion
|
Host Organism | Arabidopsis thaliana |
Notes | |
Infection model | Arabidopsis leaf infiltration model |
Reference | 19497948 |
Results |
Pathogenic
Found only in pathogenic strains
Hits to this gene were found in one genus
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG014886 (151 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA14_33980
Search term: tsd2
Search term: Tsd2
|
Quorum sensing differentially regulates Pseudomonas aeruginosa type VI secretion locus I and homologous loci II and III, which are required for pathogenesis.
Lesic B, Starkey M, He J, Hazan R, Rahme LG
Microbiology (Reading) 2009 Sep;155(Pt 9):2845-2855
PubMed ID: 19497948
|
RsmA and AmrZ orchestrate the assembly of all three type VI secretion systems in Pseudomonas aeruginosa.
Allsopp LP, Wood TE, Howard SA, Maggiorelli F, Nolan LM, Wettstadt S, Filloux A
Proc Natl Acad Sci U S A 2017 Jul 18;114(29):7707-7712
PubMed ID: 28673999
|
Diversity and prevalence of type VI secretion system effectors in clinical Pseudomonas aeruginosa isolates.
Robinson LA, Collins ACZ, Murphy RA, Davies JC, Allsopp LP
Front Microbiol 2022;13:1042505
PubMed ID: 36687572
|