Pseudomonas aeruginosa UCBPP-PA14, PA14_33990 (clpV3)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00300
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0019538 protein metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.1780.10
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.300 365 559 4.0E-49
Gene3D G3DSA:3.40.50.300 176 364 5.4E-62
SMART SM00382 IPR003593 AAA+ ATPase domain 612 754 5.1E-8
SMART SM00382 IPR003593 AAA+ ATPase domain 215 360 1.0E-9
CDD cd00009 AAA 198 353 2.46224E-14
Coils Coil 518 538 -
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 690 708 8.4E-31
Pfam PF10431 C-terminal, D2-small domain, of ClpB protein IPR019489 Clp ATPase, C-terminal 781 848 1.7E-5
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 616 634 8.4E-31
Pfam PF07724 AAA domain (Cdc48 subfamily) IPR003959 ATPase, AAA-type, core 611 775 2.7E-36
Pfam PF00004 ATPase family associated with various cellular activities (AAA) IPR003959 ATPase, AAA-type, core 220 332 2.7E-10
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 661 679 8.4E-31
ProSitePatterns PS00870 Chaperonins clpA/B signature 1. IPR018368 ClpA/B, conserved site 1 311 323 -
Pfam PF17871 AAA lid domain IPR041546 ClpA/ClpB, AAA lid domain 360 453 3.4E-30
CDD cd00009 AAA 587 744 2.00376E-15
Pfam PF02861 Clp amino terminal domain, pathogenicity island component IPR004176 Clp, N-terminal 21 71 2.1E-10
Coils Coil 429 449 -
MobiDBLite mobidb-lite consensus disorder prediction 153 178 -
Coils Coil 474 494 -
TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family IPR017729 Type VI secretion system, ATPase ClpV1 10 849 0.0
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 561 838 1.01E-60
SUPERFAMILY SSF81923 IPR036628 Clp, N-terminal domain superfamily 10 131 5.23E-19
Gene3D G3DSA:1.10.1780.10 IPR036628 Clp, N-terminal domain superfamily 1 156 6.1E-39
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 723 737 8.4E-31
Gene3D G3DSA:3.40.50.300 565 778 1.1E-63
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 176 535 6.26E-72

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.