Pseudomonas aeruginosa UCBPP-PA14, PA14_67210 (tli5b1)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest |
| Locus Tag |
PA14_67210
|
| Name |
tli5b1
|
| Replicon | chromosome |
| Genomic location | 5998619 - 5999494 (- strand) |
| Transposon Mutants | 1 transposon mutants in UCBPP-PA14 |
Cross-References
| RefSeq | YP_793558.1 |
| GI | 116053235 |
| Entrez | 4383400 |
| NCBI Locus Tag | PA14_67210 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
type VI secretion lipase immunity protein, Tli5b1
|
| Synonyms |
hypothetical protein |
| Evidence for Translation | |
| Charge (pH 7) | 1.61 |
| Kyte-Doolittle Hydrophobicity Value | -0.329 |
| Molecular Weight (kDa) | 32.3 |
| Isoelectric Point (pI) | 7.67 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 75 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG015015 (38 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PA14_67210
Search term: tli5b1
Search term: type VI secretion lipase immunity protein, Tli5b1
|
Human Homologs
References
|
RsmA and AmrZ orchestrate the assembly of all three type VI secretion systems in Pseudomonas aeruginosa.
Allsopp LP, Wood TE, Howard SA, Maggiorelli F, Nolan LM, Wettstadt S, Filloux A
Proc Natl Acad Sci U S A 2017 Jul 18;114(29):7707-7712
PubMed ID: 28673999
|