Pseudomonas stutzeri A1501, PST_0399

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006564 L-serine biosynthetic process
IMP
Inferred from Mutant Phenotype 		ECO:0000315
mutant phenotype evidence used in manual assertion		 28827360 Reviewed by curator
Molecular Function GO:0051990 (R)-2-hydroxyglutarate dehydrogenase activity
IMP
Inferred from Mutant Phenotype 		ECO:0000315
mutant phenotype evidence used in manual assertion		 28827360 Reviewed by curator
Biological Process GO:0006564 L-serine biosynthetic process
IGI
Inferred from Genetic Interaction 		ECO:0006095
28827360 Reviewed by curator
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02913
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0050660 flavin adenine dinucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF56176
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other A1501 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF56176 FAD-binding/transporter-associated domain-like IPR036318 FAD-binding, type PCMH-like superfamily 5 217 3.69E-69
Pfam PF01565 FAD binding domain IPR006094 FAD linked oxidase, N-terminal 41 179 4.8E-39
Gene3D G3DSA:3.30.70.2740 - - - 336 421 2.5E-26
Pfam PF02913 FAD linked oxidases, C-terminal domain IPR004113 FAD-binding oxidoreductase/transferase, type 4, C-terminal 217 461 9.0E-64
SUPERFAMILY SSF55103 FAD-linked oxidases, C-terminal domain IPR016164 FAD-linked oxidase-like, C-terminal 222 463 8.67E-61
FunFam G3DSA:1.10.45.10:FF:000001 D-lactate dehydrogenase mitochondrial - - 422 462 1.1E-17
FunFam G3DSA:3.30.465.10:FF:000025 FAD-binding oxidoreductase - - 95 214 2.3E-68
Gene3D G3DSA:3.30.465.10 - IPR016169 FAD-binding, type PCMH, subdomain 2 3 221 3.1E-68
Gene3D G3DSA:3.30.70.2190 - - - 222 333 1.1E-25
PANTHER PTHR43716 D-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL - - 5 462 0.0
FunFam G3DSA:3.30.70.2740:FF:000005 FAD-binding oxidoreductase - - 336 421 1.4E-50
Gene3D G3DSA:1.10.45.10 - IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 422 461 3.4E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.