Pseudomonas aeruginosa LESB58, PALES_00001 (dnaA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006270 DNA replication initiation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00760
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003688 DNA replication origin binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00377
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006275 regulation of DNA replication
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00760
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00760
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00760
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00377
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

DNA replication, recombination, modification and repair Other LESB58 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF11638 DnaA N-terminal domain IPR024633 DnaA N-terminal domain 4 63 6.4E-21
SUPERFAMILY SSF48295 IPR010921 Trp repressor/replication initiator 410 512 6.28E-37
CDD cd00009 AAA 212 337 4.44187E-18
PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature IPR020591 Chromosomal replication control, initiator DnaA-like 472 491 1.8E-52
ProSitePatterns PS01008 DnaA protein signature. IPR018312 Chromosomal replication control, initiator DnaA, conserved site 472 491 -
SMART SM00760 IPR013159 Chromosomal replication initiator, DnaA C-terminal 422 491 9.1E-44
PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature IPR020591 Chromosomal replication control, initiator DnaA-like 244 258 1.8E-52
Gene3D G3DSA:3.30.300.180 IPR038454 DnaA, N-terminal domain superfamily 2 104 7.2E-29
Pfam PF08299 Bacterial dnaA protein helix-turn-helix IPR013159 Chromosomal replication initiator, DnaA C-terminal 423 491 9.3E-32
PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature IPR020591 Chromosomal replication control, initiator DnaA-like 310 337 1.8E-52
Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. IPR001957 Chromosomal replication control, initiator DnaA 3 513 34.157
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 180 390 2.21E-44
Gene3D G3DSA:1.10.8.60 345 415 1.1E-23
PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature IPR020591 Chromosomal replication control, initiator DnaA-like 276 290 1.8E-52
Gene3D G3DSA:3.40.50.300 162 343 5.0E-49
TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA IPR001957 Chromosomal replication control, initiator DnaA 6 512 1.8E-187
Gene3D G3DSA:1.10.1750.10 IPR010921 Trp repressor/replication initiator 421 514 1.7E-37
CDD cd06571 Bac_DnaA_C IPR013159 Chromosomal replication initiator, DnaA C-terminal 423 512 4.56262E-42
PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature IPR020591 Chromosomal replication control, initiator DnaA-like 212 232 1.8E-52
SMART SM00382 IPR003593 AAA+ ATPase domain 211 420 2.3E-7
Pfam PF00308 Bacterial dnaA protein IPR013317 Chromosomal replication initiator protein DnaA 179 396 9.5E-100

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.