Pseudomonas putida KT2440, PP_2614 (vgrG3)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other KT2440 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppu03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
MobiDBLite mobidb-lite consensus disorder prediction - - 345 364 -
NCBIfam TIGR03361 JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset 14 542 0.0
NCBIfam TIGR01646 JCVI: type VI secretion system tip protein VgrG IPR006533 Type VI secretion system, RhsGE-associated Vgr protein 21 525 5.9E-121
Pfam PF04717 Type VI secretion system/phage-baseplate injector OB domain IPR006531 Gp5/Type VI secretion system Vgr protein, OB-fold domain 408 475 1.4E-12
Gene3D G3DSA:2.40.50.230 - IPR037026 Vgr protein, OB-fold domain superfamily 380 478 4.0E-37
SUPERFAMILY SSF69255 gp5 N-terminal domain-like - - 386 473 3.66E-31
PANTHER PTHR32305 - - - 45 540 1.8E-89
SUPERFAMILY SSF69279 Phage tail proteins - - 12 183 4.21E-49
Gene3D G3DSA:4.10.220.110 - - - 243 306 2.0E-75
SUPERFAMILY SSF69349 Phage fibre proteins - - 464 673 7.38E-54
Pfam PF05954 Phage tail baseplate hub (GPD) - - 28 349 1.2E-65
Gene3D G3DSA:3.55.50.10 - - - 97 188 2.0E-75
Gene3D G3DSA:2.30.110.50 - - - 22 350 2.0E-75
SUPERFAMILY SSF69279 Phage tail proteins - - 215 387 2.55E-30

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.