Pseudomonas putida KT2440, PP_2623 (tssC3)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas putida KT2440 (TIGR)
GCF_000007565.2|latest
Locus Tag
PP_2623
Name
tssC3
Replicon chromosome
Genomic location 2998984 - 3000474 (- strand)
CommentPart of the K3-T6SS KT2440-Type VI secretion system

Cross-References

RefSeq NP_744767.1
GI 26989342

Product

Feature Type CDS
Coding Frame 1
Product Name
TssC3
Product Name Confidence: Class 2
Synonyms hypothetical protein
Evidence for Translation
Charge (pH 7)
Kyte-Doolittle Hydrophobicity Value -0.417
Molecular Weight (kDa) 56.0
Isoelectric Point (pI) 5.55

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PP_2623
Search term: tssC3
Search term: TssC3

Human Homologs

References

The Pseudomonas putida T6SS is a plant warden against phytopathogens.
Bernal P, Allsopp LP, Filloux A, Llamas MA
ISME J 2017 Apr;11(4):972-987
PubMed ID: 28045455