Pseudomonas putida KT2440, PP_3098 (tssE1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other KT2440 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.10.450.40 - - - 20 149 1.6E-5
Pfam PF04965 Baseplate wedge protein gp25 IPR007048 IraD/Gp25-like 36 135 8.1E-14
PANTHER PTHR38595 CYTOPLASMIC PROTEIN-RELATED - - 3 157 5.5E-21
NCBIfam TIGR03357 JCVI: type VI secretion system baseplate subunit TssE IPR017737 Type VI secretion system protein TssE1-like 9 156 4.9E-34
SUPERFAMILY SSF160719 gpW/gp25-like - - 35 146 3.92E-8

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.