Pseudomonas aeruginosa PAO1, PA4570.1 (rsmW)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Fur box | 5117920 | 5117938 | + |
|
12207696 | Details |
| Fur binding site | 5117921 | 5117939 | + |
ECO:0000314
direct assay evidence used in manual assertion |
12207696 | Details |
| Inverted repeat: AACGCCGCCGT-N4-ACGGCGGCGTT | 5117854 | 5117879 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 1195 | 5117856 | 5117877 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: TCCGGGAAGGTC-N6-GACCTTCCCGGA | 5118286 | 5118315 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Shine-Dalgarno sequence | 5118533 | 5118536 | + |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |