Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA0755
|
Name |
opdH
Synonym: opdH |
Replicon | chromosome |
Genomic location | 822915 - 824198 (- strand) |
Transposon Mutants | 4 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 2 transposon mutants in orthologs |
RefSeq | NP_249446.1 |
GI | 15595952 |
Affymetrix | PA0755_at |
Entrez | 882059 |
GenBank | AAG04144.1 |
INSDC | AAG04144.1 |
NCBI Locus Tag | PA0755 |
protein_id(GenBank) | gb|AAG04144.1|AE004510_8|gnl|PseudoCAP|PA0755 |
TIGR | NTL03PA00756 |
UniParc | UPI00000C513D |
UniProtKB Acc | Q9I5H4 |
UniProtKB ID | Q9I5H4_PSEAE |
UniRef100 | UniRef100_Q9I5H4 |
UniRef50 | UniRef50_W6QYC2 |
UniRef90 | UniRef90_Q9I5H4 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
cis-aconitate porin OpdH
|
Synonyms |
OccK5 cis-aconitate porin OpdH |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | 2.21 |
Kyte-Doolittle Hydrophobicity Value | -0.448 |
Molecular Weight (kDa) | 47.0 |
Isoelectric Point (pI) | 8.57 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
2Y0L | TRANSPORT PROTEIN | 12/03/10 | Crystal Structure of Pseudomonas Aeruginosa OpdO | PSEUDOMONAS AERUGINOSA | 2.59 | X-RAY DIFFRACTION | 100.0 |
3T20 | MEMBRANE PROTEIN | 07/22/11 | Crystal structure of Pseudomonas aeruginosa OccK5 (OpdH) | Pseudomonas aeruginosa | 2.6 | X-RAY DIFFRACTION | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 21 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000729 (839 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA0755
Search term: opdH
Search term: cis-aconitate porin OpdH
|
Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
|
Responses of carbapenemase-producing and non-producing carbapenem-resistant Pseudomonas aeruginosa strains to meropenem revealed by quantitative tandem mass spectrometry proteomics.
Salvà-Serra F, Jaén-Luchoro D, Marathe NP, Adlerberth I, Moore ERB, Karlsson R
Front Microbiol 2022;13:1089140
PubMed ID: 36845973
|
Role of the novel OprD family of porins in nutrient uptake in Pseudomonas aeruginosa.
Tamber S, Ochs MM, Hancock RE
J Bacteriol 2006 Jan;188(1):45-54
PubMed ID: 16352820
|
OccK channels from Pseudomonas aeruginosa exhibit diverse single-channel electrical signatures but conserved anion selectivity.
Liu J, Eren E, Vijayaraghavan J, Cheneke BR, Indic M, van den Berg B, Movileanu L
Biochemistry 2012 Mar 20;51(11):2319-30
PubMed ID: 22369314
|