Pseudomonas aeruginosa PAO1, PA0980

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA0980
Name
Replicon chromosome
Genomic location 1062601 - 1062885 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1

Cross-References

RefSeq NP_249671
GI 15596177
Affymetrix PA0980_at
DNASU PaCD00006450
GenBank AAG04369.1
protein_id(GenBank) gb|AAG04369.1|AE004531_6|gnl|PseudoCAP|PA0980
TIGR NTL03PA00981
UniProtKB Acc Q9I4Y9
UniProtKB ID Q9I4Y9_PSEAE

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Evidence for Translation
Charge (pH 7) -1.66
Kyte-Doolittle Hydrophobicity Value -0.224
Molecular Weight (kDa) 10.5
Isoelectric Point (pI) 5.70

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Pathogenic
Found only in pathogenic strains
Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000944 (69 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0980

Transposon Insertions in PAO1

Type Confirmed ISphoA/hah insertion site
Mutant ID UWGC: 50725
Genomic Position 1062745
Position in ORF 145(285)
Reference 14617778
Type Confirmed ISlacZ/hah insertion site
Mutant ID UWGC: 20029
Genomic Position 1062708
Position in ORF 108(285)
Reference 14617778

Transposon Insertions in Orthologs

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res. 2005 Feb;15(2):321-9
PubMed ID: 15687295