Pseudomonas aeruginosa PAO1, PA0149

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA0149
Name
Replicon chromosome
Genomic location 169361 - 169906 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_248839.1
GI 15595347
Affymetrix PA0149_at
DNASU PaCD00006064
Entrez 879673
GenBank AAG03539.1
INSDC AAG03539.1
NCBI Locus Tag PA0149
protein_id(GenBank) gb|AAG03539.1|AE004453_2|gnl|PseudoCAP|PA0149
TIGR NTL03PA00150
UniParc UPI00000C4F64
UniProtKB Acc Q9I6Y3
UniProtKB ID Q9I6Y3_PSEAE
UniRef100 UniRef100_A0A038C6P5
UniRef50 UniRef50_Q4KI14
UniRef90 UniRef90_A6UXT8

Product

Feature Type CDS
Coding Frame 1
Product Name
probable sigma-70 factor, ECF subfamily
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 5.66
Kyte-Doolittle Hydrophobicity Value -0.530
Molecular Weight (kDa) 20.4
Isoelectric Point (pI) 10.28

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 327 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000147 (855 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0149

References

No references are associated with this feature.