Pseudomonas aeruginosa PAO1, PA0199 (exbD1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA0199
Name
exbD1
Replicon chromosome
Genomic location 228944 - 229345 (+ strand)
Transposon Mutants 1 transposon mutants in PAO1

Cross-References

RefSeq NP_248890.1
GI 15595396
Affymetrix PA0199_exbD1_at
Entrez 879490
GenBank AAG03588.1
INSDC AAG03588.1
NCBI Locus Tag PA0199
protein_id(GenBank) gb|AAG03588.1|AE004458_3|gnl|PseudoCAP|PA0199
TIGR NTL03PA00200
UniParc UPI00000D4257
UniProtKB Acc Q9RMT1
UniProtKB ID EXBD_PSEAE
UniRef100 UniRef100_Q9RMT1
UniRef50 UniRef50_Q9RMT1
UniRef90 UniRef90_Q9RMT1

Product

Feature Type CDS
Coding Frame 1
Product Name
transport protein ExbD
Product Name Confidence: Class 2
Evidence for Translation
Charge (pH 7) -7.01
Kyte-Doolittle Hydrophobicity Value 0.256
Molecular Weight (kDa) 14.2
Isoelectric Point (pI) 4.23

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 330 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000198 (513 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0199
Search term: exbD1

References

Import of biopolymers into Escherichia coli: nucleotide sequences of the exbB and exbD genes are homologous to those of the tolQ and tolR genes, respectively.
Eick-Helmerich K, Braun V
J. Bacteriol. 1989 Sep;171(9):5117-26
PubMed ID: 2670903
Identification and characterization of the exbB, exbD and tonB genes of Pseudomonas putida WCS358: their involvement in ferric-pseudobactin transport.
Bitter W, Tommassen J, Weisbeek PJ
Mol. Microbiol. 1993 Jan;7(1):117-30
PubMed ID: 8437515